View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18707_low_40 (Length: 236)
Name: NF18707_low_40
Description: NF18707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18707_low_40 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 8 - 221
Target Start/End: Original strand, 40310970 - 40311183
Alignment:
| Q |
8 |
gtccaagaatatgattttgattctcatgaaccagttggtaattgttactgttattaattgtattgaagtccaatctgtttggcaggtgctgctctgagtc |
107 |
Q |
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| T |
40310970 |
gtccaagaacatgattttgattctcatgaaccagttggtaattgttactattattaattgtattgaagtccaatctgtttggcaggtgctgctctgagtc |
40311069 |
T |
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| Q |
108 |
agttataacaggaagtctccttaaagcaacccgatcacgtaagaactccgcagaaaattcttcaccggtctgtagacatatattatcttcatcgtcttta |
207 |
Q |
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| T |
40311070 |
agttataacaggaagtctccttaaagcaacccgatcacgtaagaactccgcagaaaattcttcaccggtctgtagacatatattatcttcatcgtcttta |
40311169 |
T |
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| Q |
208 |
tcagaagaggttat |
221 |
Q |
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| T |
40311170 |
tcagaagaggttat |
40311183 |
T |
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