View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18707_low_5 (Length: 528)
Name: NF18707_low_5
Description: NF18707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18707_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 491; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 19 - 517
Target Start/End: Complemental strand, 14672158 - 14671660
Alignment:
| Q |
19 |
tcaaatggcatgatgaaggagacagaaacactagatacttccatagaatggctaagatcaagaatgcaacaaaactcatatcaaccataataaacggaga |
118 |
Q |
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| T |
14672158 |
tcaaatggcatgatgaaggagacagaaacactagatacttccatagaatggctaagatcaagaatgcaacaaaactcatatcaaccataataaacggaga |
14672059 |
T |
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| Q |
119 |
tcaagttatctcagaccaagaggaaataacaagtcttataatccaccattacgctgatttatttaataactcttcaattttgcagcatgatggacttaca |
218 |
Q |
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| T |
14672058 |
tcaagttatctcagaccaagaggaaataacaagtcttataatccaccattacgctgatttatttaataactcttcaattttgcagcatgatggacttaca |
14671959 |
T |
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| Q |
219 |
taagaagtgattccaaatttgatacaaaatcaaactaatgctatgatgaccatattaccctcaaatgaagaatttataatgcactgctttcttctatcaa |
318 |
Q |
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| T |
14671958 |
taagaagtgattccaaatttgatacaaaatcaaactaatgctatgatgaccatattaccctcaaatgaagaatttataatgcactgctttcttctatcaa |
14671859 |
T |
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| Q |
319 |
tgcaattataaatcgtttcaacagatatgctagctatttagtacaagttatcaatccaacaaaatccattttcttctcagggtctatgttaactcaaagg |
418 |
Q |
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|||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14671858 |
tgcaattataaatcttttcaacagatatgctagctatttaggacaagttatcaatccaacaaaatccattttcttctcagggtctatgttaactcaaagg |
14671759 |
T |
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| Q |
419 |
caagccttcattgctaaccttttagggttctcagctggctctcttcgaatctcttacttgggagcaccaatcttcaaaggtaaacctaaaattattcat |
517 |
Q |
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| T |
14671758 |
caagccttcattgctaaccttttagggttctcagctggctctcttcgaatctcttacttgggagcaccaatcttcaaaggtaaacctaaaattattcat |
14671660 |
T |
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