View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18708_low_10 (Length: 293)

Name: NF18708_low_10
Description: NF18708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18708_low_10
NF18708_low_10
[»] scaffold0155 (2 HSPs)
scaffold0155 (42-225)||(36138-36320)
scaffold0155 (231-278)||(36052-36099)
[»] chr2 (23 HSPs)
chr2 (229-278)||(20174692-20174741)
chr2 (230-278)||(29719288-29719336)
chr2 (229-278)||(45553123-45553172)
chr2 (238-278)||(17743533-17743573)
chr2 (230-278)||(25888277-25888325)
chr2 (238-278)||(27909176-27909216)
chr2 (230-278)||(32085457-32085505)
chr2 (231-278)||(31804957-31805004)
chr2 (232-278)||(8503127-8503173)
chr2 (230-278)||(15339232-15339280)
chr2 (230-278)||(45621938-45621986)
chr2 (232-270)||(8447114-8447152)
chr2 (230-276)||(20173357-20173402)
chr2 (229-278)||(12953351-12953400)
chr2 (238-278)||(25196013-25196052)
chr2 (230-278)||(26603407-26603455)
chr2 (232-271)||(12557772-12557811)
chr2 (240-278)||(28770500-28770538)
chr2 (232-277)||(19200192-19200237)
chr2 (238-278)||(11382810-11382850)
chr2 (230-278)||(25618551-25618598)
chr2 (238-278)||(28925524-28925563)
chr2 (238-278)||(30411680-30411720)
[»] scaffold0008 (2 HSPs)
scaffold0008 (230-278)||(54854-54902)
scaffold0008 (241-278)||(48247-48284)
[»] scaffold0622 (1 HSPs)
scaffold0622 (229-278)||(721-770)
[»] scaffold0005 (1 HSPs)
scaffold0005 (229-278)||(168355-168404)
[»] chr4 (41 HSPs)
chr4 (229-278)||(13692726-13692775)
chr4 (229-278)||(14648888-14648937)
chr4 (230-278)||(15047122-15047170)
chr4 (230-278)||(15107254-15107302)
chr4 (230-278)||(17671996-17672044)
chr4 (230-275)||(20829798-20829843)
chr4 (230-278)||(9737566-9737614)
chr4 (230-278)||(11490526-11490574)
chr4 (238-278)||(13908856-13908896)
chr4 (238-278)||(17709759-17709799)
chr4 (235-278)||(7582296-7582339)
chr4 (231-278)||(13128931-13128978)
chr4 (233-278)||(22176019-22176064)
chr4 (229-278)||(22357592-22357641)
chr4 (230-271)||(25121289-25121330)
chr4 (238-278)||(5679207-5679247)
chr4 (230-278)||(12318427-12318475)
chr4 (238-278)||(17951353-17951393)
chr4 (238-278)||(17955205-17955245)
chr4 (238-278)||(19492757-19492797)
chr4 (238-278)||(19562235-19562275)
chr4 (238-278)||(20315002-20315042)
chr4 (229-276)||(19092288-19092335)
chr4 (230-277)||(40227771-40227817)
chr4 (230-275)||(12578326-12578371)
chr4 (238-275)||(13587233-13587270)
chr4 (241-278)||(17216822-17216859)
chr4 (246-278)||(1833650-1833682)
chr4 (238-278)||(11521248-11521288)
chr4 (238-278)||(13992933-13992973)
chr4 (230-278)||(19882634-19882682)
chr4 (232-271)||(19900576-19900615)
chr4 (230-268)||(9052668-9052706)
chr4 (231-277)||(11933414-11933460)
chr4 (233-275)||(19929735-19929777)
chr4 (238-275)||(11700629-11700666)
chr4 (241-278)||(22526369-22526406)
chr4 (232-268)||(10107007-10107043)
chr4 (238-274)||(11093966-11094002)
chr4 (230-274)||(12839841-12839885)
chr4 (230-278)||(21323932-21323980)
[»] chr8 (24 HSPs)
chr8 (230-278)||(29382418-29382466)
chr8 (230-278)||(30235371-30235419)
chr8 (235-278)||(17101950-17101993)
chr8 (232-271)||(31288354-31288393)
chr8 (232-278)||(26008019-26008065)
chr8 (241-278)||(30783798-30783835)
chr8 (238-278)||(5850943-5850983)
chr8 (230-274)||(14528143-14528187)
chr8 (230-278)||(24114339-24114387)
chr8 (232-278)||(14075590-14075636)
chr8 (229-278)||(5052978-5053027)
chr8 (238-279)||(13315048-13315089)
chr8 (233-278)||(24904630-24904675)
chr8 (229-278)||(34497108-34497157)
chr8 (230-278)||(17976613-17976661)
chr8 (238-278)||(19786733-19786773)
chr8 (230-278)||(30806554-30806602)
chr8 (230-277)||(6884952-6884999)
chr8 (231-270)||(13697857-13697896)
chr8 (236-275)||(18448602-18448641)
chr8 (238-277)||(25226138-25226177)
chr8 (230-277)||(28276815-28276862)
chr8 (229-271)||(24269591-24269633)
chr8 (238-278)||(24110712-24110752)
[»] chr7 (54 HSPs)
chr7 (230-278)||(10587081-10587129)
chr7 (230-278)||(7318267-7318315)
chr7 (230-278)||(9864383-9864431)
chr7 (230-278)||(15869589-15869637)
chr7 (235-278)||(8979063-8979106)
chr7 (232-279)||(10937598-10937645)
chr7 (231-278)||(23100009-23100056)
chr7 (229-275)||(19153291-19153337)
chr7 (229-275)||(20752690-20752736)
chr7 (229-278)||(3734589-3734638)
chr7 (230-271)||(7397190-7397231)
chr7 (238-275)||(8054118-8054155)
chr7 (229-278)||(9574400-9574449)
chr7 (238-278)||(8054546-8054586)
chr7 (238-278)||(13759917-13759957)
chr7 (230-270)||(16365699-16365739)
chr7 (238-276)||(10584545-10584583)
chr7 (238-271)||(2563820-2563853)
chr7 (238-271)||(4986557-4986590)
chr7 (238-271)||(4990655-4990688)
chr7 (238-275)||(9720966-9721003)
chr7 (230-275)||(10648572-10648617)
chr7 (229-278)||(16297877-16297926)
chr7 (230-274)||(1814109-1814153)
chr7 (230-278)||(2350804-2350852)
chr7 (230-278)||(3329715-3329763)
chr7 (230-278)||(5530015-5530063)
chr7 (230-278)||(5797505-5797553)
chr7 (230-278)||(9731684-9731732)
chr7 (238-278)||(11221221-11221261)
chr7 (230-278)||(17153211-17153259)
chr7 (238-278)||(18369037-18369077)
chr7 (238-278)||(18661592-18661632)
chr7 (238-278)||(31492932-31492972)
chr7 (230-277)||(1584539-1584585)
chr7 (232-271)||(5047450-5047489)
chr7 (232-279)||(18449238-18449285)
chr7 (242-277)||(20582265-20582300)
chr7 (232-271)||(23093306-23093345)
chr7 (232-278)||(4785833-4785878)
chr7 (232-278)||(4818833-4818878)
chr7 (229-271)||(14196036-14196078)
chr7 (238-268)||(26134814-26134844)
chr7 (230-275)||(1587675-1587720)
chr7 (230-275)||(12329676-12329721)
chr7 (238-271)||(15303684-15303717)
chr7 (241-278)||(21227184-21227221)
chr7 (230-278)||(6013587-6013635)
chr7 (242-278)||(8313452-8313488)
chr7 (232-276)||(12391181-12391225)
chr7 (238-278)||(14755187-14755227)
chr7 (238-278)||(18495375-18495415)
chr7 (238-278)||(18662443-18662483)
chr7 (230-278)||(21230306-21230354)
[»] chr6 (40 HSPs)
chr6 (230-278)||(9726016-9726064)
chr6 (230-278)||(17729146-17729194)
chr6 (238-278)||(12183388-12183428)
chr6 (230-278)||(21672492-21672540)
chr6 (230-278)||(21907426-21907474)
chr6 (230-278)||(25927360-25927408)
chr6 (235-275)||(27124552-27124592)
chr6 (230-278)||(27737746-27737794)
chr6 (231-278)||(5624635-5624682)
chr6 (231-278)||(14079501-14079548)
chr6 (230-276)||(18075447-18075493)
chr6 (238-276)||(20005938-20005976)
chr6 (232-278)||(21932109-21932155)
chr6 (230-271)||(15466364-15466405)
chr6 (241-278)||(23645824-23645861)
chr6 (231-279)||(2586716-2586764)
chr6 (230-278)||(8241271-8241319)
chr6 (238-278)||(9516787-9516827)
chr6 (230-278)||(20145117-20145165)
chr6 (230-278)||(21679908-21679956)
chr6 (230-278)||(21688852-21688900)
chr6 (230-278)||(22187674-22187722)
chr6 (230-278)||(23143716-23143764)
chr6 (238-278)||(23844522-23844562)
chr6 (230-271)||(8039195-8039236)
chr6 (241-278)||(17299888-17299925)
chr6 (229-278)||(19244578-19244627)
chr6 (230-279)||(22567834-22567883)
chr6 (237-274)||(34092327-34092364)
chr6 (230-278)||(7543017-7543065)
chr6 (230-278)||(11176944-11176992)
chr6 (233-277)||(20002440-20002484)
chr6 (230-278)||(28933717-28933765)
chr6 (232-270)||(20722240-20722278)
chr6 (232-278)||(28589487-28589533)
chr6 (241-278)||(22566219-22566256)
chr6 (238-278)||(4339737-4339777)
chr6 (238-270)||(9899024-9899056)
chr6 (238-278)||(26587622-26587662)
chr6 (238-278)||(28586087-28586127)
[»] chr3 (32 HSPs)
chr3 (230-278)||(21301912-21301960)
chr3 (230-278)||(10917912-10917960)
chr3 (230-278)||(12805947-12805995)
chr3 (231-278)||(10744897-10744944)
chr3 (231-277)||(3116476-3116522)
chr3 (230-279)||(21325334-21325383)
chr3 (230-278)||(6289897-6289945)
chr3 (238-278)||(12759389-12759429)
chr3 (230-278)||(13908283-13908330)
chr3 (238-278)||(16245786-16245826)
chr3 (238-278)||(22349411-22349451)
chr3 (230-274)||(41508361-41508405)
chr3 (243-278)||(821571-821606)
chr3 (231-277)||(5508331-5508377)
chr3 (229-271)||(21825932-21825974)
chr3 (229-278)||(2167674-2167722)
chr3 (238-279)||(19908309-19908350)
chr3 (239-275)||(10923150-10923186)
chr3 (238-278)||(11518018-11518058)
chr3 (238-278)||(18458481-18458521)
chr3 (238-270)||(18736736-18736768)
chr3 (229-271)||(8143608-8143650)
chr3 (230-276)||(19171893-19171939)
chr3 (229-278)||(8319033-8319081)
chr3 (238-271)||(12752209-12752242)
chr3 (230-263)||(22245344-22245377)
chr3 (238-271)||(31286078-31286111)
chr3 (238-278)||(8770022-8770061)
chr3 (238-278)||(11533032-11533072)
chr3 (238-278)||(12411153-12411193)
chr3 (230-278)||(20429704-20429752)
chr3 (238-278)||(21303411-21303451)
[»] chr1 (36 HSPs)
chr1 (230-277)||(17359156-17359203)
chr1 (230-277)||(23038069-23038116)
chr1 (238-278)||(15544023-15544063)
chr1 (238-278)||(21449091-21449131)
chr1 (230-278)||(27117775-27117823)
chr1 (231-275)||(32383058-32383102)
chr1 (231-278)||(22664201-22664248)
chr1 (231-278)||(24281272-24281319)
chr1 (230-278)||(9787936-9787984)
chr1 (238-278)||(12208603-12208643)
chr1 (238-278)||(13345393-13345433)
chr1 (238-278)||(17610313-17610353)
chr1 (230-278)||(17837511-17837559)
chr1 (238-278)||(18736297-18736337)
chr1 (238-278)||(24306362-24306402)
chr1 (238-278)||(25405687-25405727)
chr1 (230-277)||(15813212-15813259)
chr1 (229-268)||(16359864-16359903)
chr1 (231-270)||(21847629-21847668)
chr1 (232-271)||(26540892-26540931)
chr1 (230-275)||(3591713-3591758)
chr1 (241-278)||(34480974-34481011)
chr1 (230-278)||(12012857-12012905)
chr1 (238-278)||(21988039-21988079)
chr1 (238-278)||(29242521-29242561)
chr1 (231-278)||(51473933-51473978)
chr1 (239-278)||(16179010-16179049)
chr1 (238-277)||(26649028-26649067)
chr1 (237-276)||(31236107-31236146)
chr1 (238-268)||(10064637-10064667)
chr1 (240-278)||(33190681-33190719)
chr1 (238-275)||(14779567-14779604)
chr1 (229-277)||(147624-147672)
chr1 (246-278)||(16787783-16787815)
chr1 (238-278)||(18825658-18825697)
chr1 (250-278)||(24214558-24214586)
[»] chr5 (34 HSPs)
chr5 (229-278)||(25550561-25550610)
chr5 (230-274)||(15469930-15469974)
chr5 (238-278)||(19086236-19086276)
chr5 (231-275)||(20419951-20419995)
chr5 (230-277)||(19051543-19051590)
chr5 (230-278)||(17171610-17171658)
chr5 (230-278)||(18937742-18937790)
chr5 (230-278)||(19283912-19283960)
chr5 (231-271)||(24267018-24267058)
chr5 (231-271)||(24343649-24343689)
chr5 (238-277)||(19004284-19004323)
chr5 (230-273)||(24662212-24662255)
chr5 (232-278)||(23380314-23380360)
chr5 (230-271)||(18208312-18208353)
chr5 (238-271)||(36175136-36175169)
chr5 (238-278)||(15375939-15375979)
chr5 (232-268)||(15544047-15544083)
chr5 (230-278)||(15690772-15690819)
chr5 (238-274)||(20744872-20744908)
chr5 (238-278)||(24140445-24140484)
chr5 (238-269)||(17769461-17769492)
chr5 (231-270)||(26120860-26120899)
chr5 (232-271)||(32417419-32417458)
chr5 (236-271)||(34487638-34487673)
chr5 (230-268)||(26121390-26121428)
chr5 (241-271)||(28253286-28253316)
chr5 (238-271)||(17431885-17431918)
chr5 (230-279)||(24852228-24852277)
chr5 (238-278)||(17185465-17185505)
chr5 (238-278)||(20315487-20315526)
chr5 (238-278)||(22755523-22755563)
chr5 (230-270)||(24167649-24167689)
chr5 (238-278)||(34128639-34128678)
chr5 (238-278)||(39434465-39434504)
[»] scaffold0090 (1 HSPs)
scaffold0090 (231-278)||(7469-7516)
[»] scaffold0048 (1 HSPs)
scaffold0048 (231-277)||(78589-78635)
[»] scaffold0042 (1 HSPs)
scaffold0042 (237-271)||(29908-29942)
[»] scaffold0016 (1 HSPs)
scaffold0016 (232-278)||(12105-12151)
[»] scaffold0620 (1 HSPs)
scaffold0620 (237-274)||(7661-7698)
[»] scaffold0063 (1 HSPs)
scaffold0063 (230-275)||(51117-51162)
[»] scaffold0838 (1 HSPs)
scaffold0838 (238-278)||(2372-2412)
[»] scaffold0832 (1 HSPs)
scaffold0832 (238-278)||(2403-2443)
[»] scaffold0672 (1 HSPs)
scaffold0672 (230-278)||(1728-1776)
[»] scaffold0054 (1 HSPs)
scaffold0054 (238-278)||(72074-72114)
[»] scaffold0035 (1 HSPs)
scaffold0035 (238-278)||(69915-69955)
[»] scaffold0024 (1 HSPs)
scaffold0024 (230-278)||(39578-39626)
[»] scaffold0001 (2 HSPs)
scaffold0001 (230-278)||(81481-81529)
scaffold0001 (230-277)||(69076-69122)
[»] scaffold0650 (1 HSPs)
scaffold0650 (231-278)||(6282-6329)
[»] scaffold0638 (1 HSPs)
scaffold0638 (235-278)||(880-922)
[»] scaffold0957 (1 HSPs)
scaffold0957 (230-271)||(3147-3188)
[»] scaffold0043 (1 HSPs)
scaffold0043 (238-271)||(89917-89950)
[»] scaffold0019 (1 HSPs)
scaffold0019 (238-275)||(181765-181802)
[»] scaffold0136 (1 HSPs)
scaffold0136 (230-270)||(15530-15570)


Alignment Details
Target: scaffold0155 (Bit Score: 144; Significance: 9e-76; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 42 - 225
Target Start/End: Complemental strand, 36320 - 36138
Alignment:
Q  42 tgtttctcctagattctcttgataatcatgcatacccaatcgaagttggctgaaatagagaataaattttactcatcatataactaaataattcaaaaat 141  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||| ||||||||||||| ||||||||| |||||||||||    
T  36320 tgtttctcctagattctcttgataatcatgcatacccactcgaagttggatgaaacagggaatagattttactcatcagataactaaagaattcaaaaat 36221  T
Q  142 gaagttggcgagatcatccagattgctaaatgagatccaaaagttgatgatgttcttaggtcgcattttttgcccatgctctaa 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  36220 gaagttggcgagatcatccagattgctaaatgagatccaaaagttgatgatg-tctcaggtcgcattttttgcccatgctctaa 36138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 36099 - 36052
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||| |||| ||||| ||||| ||||||||||||||||||||    
T  36099 attaggaaagcgtactaaatcatttactaagtaataaagtgataagta 36052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 20174741 - 20174692
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20174741 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 20174692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 29719336 - 29719288
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29719336 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 29719288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 45553123 - 45553172
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  45553123 agattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagta 45553172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 17743573 - 17743533
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17743573 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 17743533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 25888325 - 25888277
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  25888325 gattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagta 25888277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 27909216 - 27909176
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27909216 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 27909176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 32085457 - 32085505
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  32085457 gattaggtaagtgtaccaaattgtttaccaagtaataaagtgataagta 32085505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 31805004 - 31804957
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||    
T  31805004 attaggaaagtgtaccaaattgtttaccaaataataaagtgataagta 31804957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 8503173 - 8503127
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  8503173 ttaggcaagtgtaccaaatcgtttaccaagtaataacgtgataagta 8503127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 15339232 - 15339280
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||| |||||||||||||||||||| |||||    
T  15339232 gattaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagta 15339280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 45621986 - 45621938
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||| |||||||||| |||||||||||||||||||||||||| |||||    
T  45621986 gattaagaaagtgtacaaaatcgtttaccaagtaataaagtgagaagta 45621938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 8447152 - 8447114
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagt 270  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  8447152 ttaggcaagtgtaccaaatcgtttaccaagtaataaagt 8447114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 20173402 - 20173357
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataag 276  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  20173402 gattaggaaagtgtaccaaatcg-ttaccaagttataaagtgataag 20173357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 12953400 - 12953351
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||||||||||||| |||| ||||||||||||| |||||||    
T  12953400 agattaggcaagtgtaccaaatcatttatcaagtaataaagtaataagta 12953351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 25196013 - 25196052
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  25196013 aagtgtaccaa-tcgtttaccaagtaataaagtgataagta 25196052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 26603455 - 26603407
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||||||||| ||||| ||||||| |||||||||||||    
T  26603455 gattaggcaagtgtaccaaattgtttatcaagtaaaaaagtgataagta 26603407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 12557811 - 12557772
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  12557811 ttaggcaagtgtaccaaatcttttaccaagtaataaagtg 12557772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 28770538 - 28770500
Alignment:
Q  240 gtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  28770538 gtgtaccaaatcctttaccaaataataaagtgataagta 28770500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 19200237 - 19200192
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    ||||| |||||||||||||| |||||||| |||||| |||||||||    
T  19200237 ttaggcaagtgtaccaaatcttttaccaaataataatgtgataagt 19200192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 11382850 - 11382810
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||||||||||  |||||||||||||||||    
T  11382850 aagtgtatcaaatcgtttaccagataataaagtgataagta 11382810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 25618551 - 25618598
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||| ||| ||||||||| |||||||||||||||||||||||    
T  25618551 gattaggcaagcgtatcaaatcgtt-accaagtaataaagtgataagta 25618598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 28925524 - 28925563
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||||||| |||||||||||||||||||||||    
T  28925524 aagtgtactaaatcgtt-accaagtaataaagtgataagta 28925563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 30411680 - 30411720
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| ||||| ||||||| ||||||||||||||||||    
T  30411680 aagtgtacgaaatcttttaccatgtaataaagtgataagta 30411720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 54854 - 54902
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  54854 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 54902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 48284 - 48247
Alignment:
Q  241 tgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||| |||||||||||||||||||||||||||||||||    
T  48284 tgtatcaaatcgtttaccaagtaataaagtgataagta 48247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 721 - 770
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  721 agattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 168404 - 168355
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  168404 agattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 168355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 13692775 - 13692726
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13692775 agattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 13692726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 14648888 - 14648937
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14648888 agattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 14648937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 15047122 - 15047170
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15047122 gattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagta 15047170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 15107302 - 15107254
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15107302 gattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagta 15107254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 17671996 - 17672044
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17671996 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 17672044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 20829843 - 20829798
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  20829843 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 20829798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 9737614 - 9737566
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  9737614 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagta 9737566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 11490526 - 11490574
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  11490526 gattaggaaagtgtaccaaattgtttatcaagtaataaagtgataagta 11490574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 13908856 - 13908896
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13908856 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 13908896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 17709759 - 17709799
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17709759 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 17709799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 7582296 - 7582339
Alignment:
Q  235 ggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  7582296 ggaaagtgtaccaaatcatttaccaagtaataaagtgataagta 7582339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 13128978 - 13128931
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  13128978 attaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagta 13128931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 22176064 - 22176019
Alignment:
Q  233 taggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  22176064 taggcaagtgtaccaaatcgtttatcaagtaataaagtgataagta 22176019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 22357641 - 22357592
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  22357641 agattaggtaagtgtactaaatcatttaccaagtaataaagtgataagta 22357592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 25121330 - 25121289
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  25121330 gattaggaaagtgttccaaatcgtttaccaagtaataaagtg 25121289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 5679207 - 5679247
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  5679207 aagtgtaccaaatcgtttaccaagtaataaagtgattagta 5679247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 12318427 - 12318475
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||| || |||||||||||||||||||||||    
T  12318427 gattaggcaagtgtaccaaatcattaaccaagtaataaagtgataagta 12318475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 17951393 - 17951353
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  17951393 aagtgtaccaaatcgtttaccaagtactaaagtgataagta 17951353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 17955245 - 17955205
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  17955245 aagtgtaccaaatcgtttaccaagtactaaagtgataagta 17955205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 19492797 - 19492757
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  19492797 aagtgtaccaaatcgtttaccaagtaataaagggataagta 19492757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 19562275 - 19562235
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  19562275 aagtgtaccaaatcatttaccaagtaataaagtgataagta 19562235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 20315002 - 20315042
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  20315002 aagtgtaccaaatcgtttaccaagtaataaattgataagta 20315042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 19092288 - 19092335
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataag 276  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  19092288 agattaggcaagtgtaccaaattgtttatcaagtaataaagtgataag 19092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 40227771 - 40227817
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  40227771 gattaggcaagtgtaccaaatcgtt-accaagtaataaagtgataagt 40227817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 12578371 - 12578326
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||||    
T  12578371 gattaggcaagtgtaccaaatcatttaccaaataataaagtgataa 12578326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 13587233 - 13587270
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  13587233 aagtgtaccaaatcgtttaccaaataataaagtgataa 13587270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 17216822 - 17216859
Alignment:
Q  241 tgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  17216822 tgtaccaaatcgtttaccaagcaataaagtgataagta 17216859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 1833682 - 1833650
Alignment:
Q  246 caaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||||||||||    
T  1833682 caaatcgtttaccaagtaataaagtgataagta 1833650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 11521288 - 11521248
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  11521288 aagtgtaccaaatcgtttatcaaataataaagtgataagta 11521248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 13992973 - 13992933
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  13992973 aagtgtaccaaattgtttaccaagtaataaagtggtaagta 13992933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 19882634 - 19882682
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||| |||||||||| |||||||||||||||| ||||    
T  19882634 gattaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagta 19882682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 19900576 - 19900615
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  19900576 ttaggcaagtgtaccaaattgtttaccaagtaataaagtg 19900615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 268
Target Start/End: Original strand, 9052668 - 9052706
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaa 268  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  9052668 gattaggcaagtgtaccaaatcatttaccaagtaataaa 9052706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 11933414 - 11933460
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    |||||| |||||| || |||||||||||||||||| |||||||||||    
T  11933414 attaggcaagtgttcctaatcgtttaccaagtaatgaagtgataagt 11933460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 19929777 - 19929735
Alignment:
Q  233 taggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    |||| |||||||||||||| |||||||||||| ||||||||||    
T  19929777 taggcaagtgtaccaaatcatttaccaagtaacaaagtgataa 19929735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 11700666 - 11700629
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  11700666 aagtgtaccaaattgtttaccaagtaataaaatgataa 11700629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 22526369 - 22526406
Alignment:
Q  241 tgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  22526369 tgtaccaaatcgtttatcaaataataaagtgataagta 22526406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 268
Target Start/End: Original strand, 10107007 - 10107043
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaa 268  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  10107007 ttaggcaagtgtagcaaatcgtttaccaagtaataaa 10107043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 11093966 - 11094002
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgata 274  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  11093966 aagtgtatcaaatcgtttaccaagtaataaaatgata 11094002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 12839885 - 12839841
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgata 274  Q
    |||||||||||||||| |||||| ||||||| ||||||| |||||    
T  12839885 gattaggaaagtgtacaaaatcgcttaccaattaataaaatgata 12839841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 21323980 - 21323932
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||| |||||||||||||| |||||| ||||| ||||    
T  21323980 gattaggcaagtgtactaaatcgtttaccaaataataatgtgatcagta 21323932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 29382466 - 29382418
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29382466 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 29382418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 30235371 - 30235419
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  30235371 gattaggcaagtgtacaaaatcgtttaccaagtaataaagtgataagta 30235419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 17101993 - 17101950
Alignment:
Q  235 ggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  17101993 ggaaagtgtatcaaatcgtttaccaagtaataaagtgataagta 17101950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 31288354 - 31288393
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31288354 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtg 31288393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 26008019 - 26008065
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  26008019 ttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagta 26008065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 30783835 - 30783798
Alignment:
Q  241 tgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagta 30783798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 5850943 - 5850983
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  5850943 aagtgtacctaatcgtttaccaagtaataaagtgataagta 5850983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 14528143 - 14528187
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgata 274  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||    
T  14528143 gattaggcaagtgtgccaaatcgtttaccaagtaataaagtgata 14528187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 24114387 - 24114339
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  24114387 gattaggcaagtgtaccaaattgtttaccaagtaataaaatgataagta 24114339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 14075590 - 14075636
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| ||||||||||| |||||||||||| |||||||||||||    
T  14075590 ttaggaaattgtaccaaatcttttaccaagtaagaaagtgataagta 14075636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 5053027 - 5052978
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||||||||||||||||||||  ||||||||||| ||||||    
T  5053027 agattaggcaagtgtaccaaatcgtttaccgggtaataaagtgctaagta 5052978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 13315089 - 13315048
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagtat 279  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  13315089 aagtgtaccagatcatttaccaagtaataaagtgataagtat 13315048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 24904630 - 24904675
Alignment:
Q  233 taggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||| |||||||||||||| |||||||| |||||||||||||||||    
T  24904630 taggcaagtgtaccaaatcatttaccaaataataaagtgataagta 24904675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 34497108 - 34497157
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||| || |||||||||||||||||||||||||||| ||||    
T  34497108 agattaggcaagtctatcaaatcgtttaccaagtaataaagtgattagta 34497157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 17976613 - 17976661
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||| ||||||| |||| |||||||||||||||||||||    
T  17976613 gattaggcaagtgtgccaaatcatttatcaagtaataaagtgataagta 17976661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 19786733 - 19786773
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  19786733 aagtataccaaatcgtttaccaagtaataaagtgacaagta 19786773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 30806602 - 30806554
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||| |||||||||||  ||||||||||||||||||||    
T  30806602 gattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagta 30806554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 6884952 - 6884999
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    ||||||| |||||||| ||||||| |||| ||||||||||||||||||    
T  6884952 gattaggcaagtgtactaaatcgtgtacccagtaataaagtgataagt 6884999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 231 - 270
Target Start/End: Original strand, 13697857 - 13697896
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagt 270  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  13697857 attaggcaagtgtaccaaatcgtttaccaattaataaagt 13697896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 18448641 - 18448602
Alignment:
Q  236 gaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  18448641 gaaagtgtaccaaatcatttaccaagtaataaagtaataa 18448602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 25226138 - 25226177
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  25226138 aagtgtactaaatcgtttatcaagtaataaagtgataagt 25226177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 28276862 - 28276815
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    ||||||| ||||||| ||||||||||||||| ||| ||||||||||||    
T  28276862 gattaggcaagtgtatcaaatcgtttaccaaataaaaaagtgataagt 28276815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 24269591 - 24269633
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||||| |||||||||||||  |||||||||||||||||||    
T  24269591 agattaggcaagtgtaccaaattatttaccaagtaataaagtg 24269633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 24110752 - 24110712
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||| |||||||||||||||| |||||||||    
T  24110752 aagtgtatcaaatcatttaccaagtaataaaatgataagta 24110712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 10587129 - 10587081
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10587129 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 10587081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 7318267 - 7318315
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  7318267 gattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagta 7318315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 9864431 - 9864383
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  9864431 gattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagta 9864383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 15869589 - 15869637
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  15869589 gattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagta 15869637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 8979106 - 8979063
Alignment:
Q  235 ggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  8979106 ggaaagtgtaccaaatcatttaccaagtaataaagtgataagta 8979063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 10937598 - 10937645
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtat 279  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  10937598 ttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtat 10937645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 23100056 - 23100009
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||    
T  23100056 attaggcaagtgtaccaaatcgtttaccaaataataaagtgataagta 23100009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 19153291 - 19153337
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  19153291 agattaggcaagtgtaccaaatcttttaccaagtaataaagtgataa 19153337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 20752690 - 20752736
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  20752690 agattaggcaagtgtaccaaatcttttaccaagtaataaagtgataa 20752736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 3734589 - 3734638
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||||||    
T  3734589 agattaggtaagtgtaccaaattttttaccaagtaataaagtgataagta 3734638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 7397190 - 7397231
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  7397190 gattaggaaagtgtaccaaaccgtttaccaagtaataaagtg 7397231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 8054155 - 8054118
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8054155 aagtgtaccaaatcgtttaccaagtaataaagtgataa 8054118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 9574400 - 9574449
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  9574400 agattaggcaagtgtactaaatcgtttaccaaggaataaagtgataagta 9574449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 8054586 - 8054546
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  8054586 aagtgtaccaaatcgtttaccaaataataaagtgataagta 8054546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 13759957 - 13759917
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  13759957 aagtgtaccaaatcgtttaccaattaataaagtgataagta 13759917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 16365699 - 16365739
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagt 270  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  16365699 gattagaaaagtgtaccaaatcgtttaccaagtaataaagt 16365739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 10584583 - 10584545
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataag 276  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  10584583 aagtgtaccaaatcgtttatcaagtaataaagtgataag 10584545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 2563820 - 2563853
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||||||||||||||||||||||||||||||||    
T  2563820 aagtgtaccaaatcgtttaccaagtaataaagtg 2563853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 4986557 - 4986590
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||||||||||||||||||||||||||||||||    
T  4986557 aagtgtaccaaatcgtttaccaagtaataaagtg 4986590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 4990655 - 4990688
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||||||||||||||||||||||||||||||||    
T  4990655 aagtgtaccaaatcgtttaccaagtaataaagtg 4990688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 9720966 - 9721003
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  9720966 aagtgtaccaaatcgtttaccaaataataaagtgataa 9721003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 10648572 - 10648617
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    |||||||||||  || ||||||||||||||||||||||||||||||    
T  10648572 gattaggaaagcatatcaaatcgtttaccaagtaataaagtgataa 10648617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 16297926 - 16297877
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||||||||||||  ||||||||||||||| ||||||||||    
T  16297926 agattaggcaagtgtaccaaataatttaccaagtaataatgtgataagta 16297877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 1814109 - 1814153
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgata 274  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||    
T  1814109 gattaggcaagtgtaccaaattatttaccaagtaataaagtgata 1814153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 2350852 - 2350804
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||| |||||||||||||||| || ||||||    
T  2350852 gattaggcaagtgtaccaaatcatttaccaagtaataaactgctaagta 2350804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 3329763 - 3329715
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||| |||||  ||||||||||||||||||||||||||    
T  3329763 gattaggtaagtgtatcaaattatttaccaagtaataaagtgataagta 3329715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 5530015 - 5530063
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| | ||||||||||| ||||||||||||||||| |||||||||    
T  5530015 gattaggcaggtgtaccaaattgtttaccaagtaataaaatgataagta 5530063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 5797505 - 5797553
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  5797505 gattaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagta 5797553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 9731732 - 9731684
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||||||||  ||||| ||||||||||||||    
T  9731732 gattaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagta 9731684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 11221261 - 11221221
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  11221261 aagtgtaccaaatcgtttactaagtaataaattgataagta 11221221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 17153259 - 17153211
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||| |||||||| ||||| ||||||||||||| |||||||||||||    
T  17153259 gattagaaaagtgtatcaaatagtttaccaagtaagaaagtgataagta 17153211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 18369077 - 18369037
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||| |||||||||||||||||||||||||||    
T  18369077 aagtgtactaaatagtttaccaagtaataaagtgataagta 18369037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 18661592 - 18661632
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  18661592 aagtgtaccaaatcgtttaccaaacaataaagtgataagta 18661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 31492932 - 31492972
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||| ||||||||||||||||||    
T  31492932 aagtgtatcaaatcgtttaccaggtaataaagtgataagta 31492972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 1584539 - 1584585
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||    
T  1584539 gattaggcaagtgtaccaa-tcatttaccaagtaataaagtgataagt 1584585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 5047489 - 5047450
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  5047489 ttaggcaagtgtaccaaatcatttaccaagtaataaagtg 5047450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 18449238 - 18449285
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtat 279  Q
    ||||| ||||||| ||||| ||||||||||||||||||||| ||||||    
T  18449238 ttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtat 18449285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 277
Target Start/End: Original strand, 20582265 - 20582300
Alignment:
Q  242 gtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20582265 gtaccaaatcgtttaccaattaataaagtgataagt 20582300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 23093306 - 23093345
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  23093306 ttaggcaagtgtaccaaatcgtttactaagtaataaagtg 23093345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 4785833 - 4785878
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  4785833 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagta 4785878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 4818833 - 4818878
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  4818833 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagta 4818878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 14196078 - 14196036
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||    
T  14196078 agattaggcaagtgtaccaaatcgtttatcaaataataaagtg 14196036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 268
Target Start/End: Complemental strand, 26134844 - 26134814
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaa 268  Q
    |||||||||||||||||||||||||||||||    
T  26134844 aagtgtaccaaatcgtttaccaagtaataaa 26134814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 1587675 - 1587720
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    ||||||| || ||||||||||||||||| ||||| |||||||||||    
T  1587675 gattaggcaaatgtaccaaatcgtttactaagtagtaaagtgataa 1587720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 12329676 - 12329721
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    ||||||| || |||||||||||||||||||||||| ||| ||||||    
T  12329676 gattaggcaaatgtaccaaatcgtttaccaagtaagaaattgataa 12329721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 271
Target Start/End: Complemental strand, 15303717 - 15303684
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||||||||||||||||||| |||||||||||    
T  15303717 aagtgtaccaaatcgtttaccaggtaataaagtg 15303684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 21227184 - 21227221
Alignment:
Q  241 tgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  21227184 tgtaccaaatcatttacaaagtaataaagtgataagta 21227221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 6013587 - 6013635
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||| |||| |||||| | ||||||||||||    
T  6013587 gattaggcaagtgtaccaaatcatttatcaagtacttaagtgataagta 6013635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 8313488 - 8313452
Alignment:
Q  242 gtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  8313488 gtacaaaatcatttaccaagtaataaagtgataagta 8313452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 12391181 - 12391225
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataag 276  Q
    ||||| ||||||||||||| ||||| ||| |||||||||||||||    
T  12391181 ttaggcaagtgtaccaaatagtttatcaaataataaagtgataag 12391225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 14755227 - 14755187
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||| |||||| |||||||| |||||    
T  14755227 aagtgtaccaaatcgtttatcaagtagtaaagtgagaagta 14755187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 18495375 - 18495415
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||| |||||| ||||||||||||||||||||    
T  18495375 aagtgtactaaattgtttactaagtaataaagtgataagta 18495415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 18662443 - 18662483
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||||| | ||||||||||||||    
T  18662443 aagtgtatcaaatcgtttaccaagcactaaagtgataagta 18662483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 21230306 - 21230354
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||| || ||||||||||||||| ||||||| |||||||||    
T  21230306 gattaggcaagtatatcaaatcgtttaccaaataataaaatgataagta 21230354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 9726016 - 9726064
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9726016 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 9726064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 17729146 - 17729194
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17729146 gattaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagta 17729194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 12183428 - 12183388
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12183428 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 12183388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 21672540 - 21672492
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  21672540 gattaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagta 21672492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 21907426 - 21907474
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  21907426 gattaggcaagtataccaaatcgtttaccaagtaataaagtgataagta 21907474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 25927408 - 25927360
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  25927408 gattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagta 25927360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 27124592 - 27124552
Alignment:
Q  235 ggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27124592 ggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 27124552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 27737794 - 27737746
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  27737794 gattaggcaagtgtactaaatcgtttaccaagtaataaagtgataagta 27737746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 278
Target Start/End: Original strand, 5624635 - 5624682
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||    
T  5624635 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagta 5624682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 14079548 - 14079501
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  14079548 attaggcaagtgtaccaaatcgtttaccaagttataaagtgataagta 14079501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 18075493 - 18075447
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataag 276  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||    
T  18075493 gattaggaaagtgtacgaaattgtttaccaagtaataaagtgataag 18075447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 20005976 - 20005938
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataag 276  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20005976 aagtgtaccaaatcgtttaccaagtaataaagtgataag 20005938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 21932155 - 21932109
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  21932155 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagta 21932109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 15466364 - 15466405
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  15466364 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtg 15466405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 23645861 - 23645824
Alignment:
Q  241 tgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagta 23645824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 2586716 - 2586764
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtat 279  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  2586716 attaggcaagtgtaccaaattgtttaccaagtaatgaagtgataagtat 2586764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 8241271 - 8241319
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||||||||| |||||| |||||||||||||    
T  8241271 gattaggcaagtgtaccaaatcgtttacgaagtaagaaagtgataagta 8241319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 9516787 - 9516827
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  9516787 aagtgtaccaaatcgtttacctagtaataaagtgataagta 9516827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 20145165 - 20145117
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  20145165 gattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagta 20145117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 21679956 - 21679908
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  21679956 gattaggcaagtgcaccaaatcgtttactaagtaataaagtgataagta 21679908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 21688900 - 21688852
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  21688900 gattaggaaagtgtacccaatcgtttactaagtaatcaagtgataagta 21688852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 22187674 - 22187722
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  22187674 gattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagta 22187722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 23143716 - 23143764
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  23143716 gattaggcaagtgtaccaaatcatttaccaattaataaagtgataagta 23143764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 23844562 - 23844522
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  23844562 aagtgtaccaaatcgtttaccaagtaataaaatgataagta 23844522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 8039236 - 8039195
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||||| |||||| |||||||||||||||||||||||||||    
T  8039236 gattaggcaagtgtgccaaatcgtttaccaagtaataaagtg 8039195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 17299925 - 17299888
Alignment:
Q  241 tgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||| |||||||||||||||||||||||||||||||||    
T  17299925 tgtagcaaatcgtttaccaagtaataaagtgataagta 17299888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 19244578 - 19244627
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||| ||| | ||||||||||||||||||||||||||||||    
T  19244578 agattaggcaagtttactagatcgtttaccaagtaataaagtgataagta 19244627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 22567834 - 22567883
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtat 279  Q
    ||||||| ||||||||||||| |||||||||||||||| |||| ||||||    
T  22567834 gattaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtat 22567883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 34092364 - 34092327
Alignment:
Q  237 aaagtgtaccaaatcgtttaccaagtaataaagtgata 274  Q
    |||||||| |||||||||||||||||||||||||||||    
T  34092364 aaagtgtatcaaatcgtttaccaagtaataaagtgata 34092327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 7543065 - 7543017
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| || |||| ||||| |||||||||||||||||||||||||||    
T  7543065 gattaggcaaatgtatcaaattgtttaccaagtaataaagtgataagta 7543017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 11176944 - 11176992
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||||| ||||||||||| |||| ||||||||||||||    
T  11176944 gattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagta 11176992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 20002484 - 20002440
Alignment:
Q  233 taggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||    
T  20002484 taggcaagtgtaccaaatcaattaccaagtaataaagtgataagt 20002440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 28933765 - 28933717
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||| || ||||| ||| |||||||||||||||||    
T  28933765 gattaggaaagtgtaccatattgtttagcaaataataaagtgataagta 28933717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 20722278 - 20722240
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagt 270  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  20722278 ttaggcaaatgtaccaaatcgtttaccaagtaataaagt 20722240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 28589533 - 28589487
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||| ||||||||||||||||||| ||| ||| |||||||||||||    
T  28589533 ttaggcaagtgtaccaaatcgtttatcaaataacaaagtgataagta 28589487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 22566256 - 22566219
Alignment:
Q  241 tgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  22566256 tgtaccaaattatttaccaagtaataaagtgataagta 22566219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 4339737 - 4339777
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||| ||||| ||| |||||||||||||||||    
T  4339737 aagtgtaccaaattgtttatcaaataataaagtgataagta 4339777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 9899056 - 9899024
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagt 270  Q
    ||||||||||||| |||||||||||||||||||    
T  9899056 aagtgtaccaaattgtttaccaagtaataaagt 9899024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 26587622 - 26587662
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||| ||||| ||||||||||||||||||    
T  26587622 aagtgtatcaaatcgtataccacgtaataaagtgataagta 26587662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 28586127 - 28586087
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||| |||||||||||||||| ||||||||| |||||||||    
T  28586127 aagtataccaaatcgtttaccgagtaataaattgataagta 28586087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 21301912 - 21301960
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21301912 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 21301960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 10917912 - 10917960
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  10917912 gattaggcaagtgtaccaaatcgtttaccaaataataaagtgataagta 10917960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 12805995 - 12805947
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  12805995 gattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagta 12805947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 278
Target Start/End: Original strand, 10744897 - 10744944
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||    
T  10744897 attaggcaagtttaccaaatcgtttaccaagtaataaagtgataagta 10744944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 231 - 277
Target Start/End: Complemental strand, 3116522 - 3116476
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  3116522 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagt 3116476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 21325334 - 21325383
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtat 279  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  21325334 gattaggcaagtgtaccaaattgtttaccaagtaataaactgataagtat 21325383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 6289897 - 6289945
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| || |||| |||||||||||||||||||||||||||||||||    
T  6289897 gattaggcaaatgtatcaaatcgtttaccaagtaataaagtgataagta 6289945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 12759389 - 12759429
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  12759389 aagtgtaccaaattgtttaccaagtaataaagtgataagta 12759429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 13908330 - 13908283
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  13908330 gattaggaaagtgtaccaaatctttt-ccaagtaataaagtgataagta 13908283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 16245826 - 16245786
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  16245826 aagtgtaccaactcgtttaccaagtaataaagtgataagta 16245786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 22349411 - 22349451
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  22349411 aagtgtaccaaatcgtttaccaaataataaagtgataagta 22349451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 41508361 - 41508405
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgata 274  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||    
T  41508361 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgata 41508405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 278
Target Start/End: Complemental strand, 821606 - 821571
Alignment:
Q  243 taccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||||||||||||||||||    
T  821606 taccaaatcgtttaccaagtaataaagtgataagta 821571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 5508331 - 5508377
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||    
T  5508331 attaggcaagtgtaccaaatcatttgccaagtaataaagtgataagt 5508377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 21825974 - 21825932
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||||| ||||||||||||||||||||| ||||||||||||    
T  21825974 agattaggtaagtgtaccaaatcgtttaccgagtaataaagtg 21825932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 2167722 - 2167674
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||||    
T  2167722 agattagacaagtgtaccaaatcgtt-accaagtaataaagtgataagta 2167674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 19908309 - 19908350
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagtat 279  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  19908309 aagtgtaccaaatcgtttaccaaataataaaatgataagtat 19908350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 10923150 - 10923186
Alignment:
Q  239 agtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10923150 agtgtaccaaatcatttaccaagtaataaagtgataa 10923186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 11518058 - 11518018
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  11518058 aagtgtaccaaatcgttcatcaagtaataaagtgataagta 11518018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 18458521 - 18458481
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  18458521 aagtgtaccaaattgtttatcaagtaataaagtgataagta 18458481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 18736768 - 18736736
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagt 270  Q
    |||||||||||||||||||||||||||||||||    
T  18736768 aagtgtaccaaatcgtttaccaagtaataaagt 18736736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 8143608 - 8143650
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||||| |||||||||||||||||||| ||| |||||||||    
T  8143608 agattaggtaagtgtaccaaatcgtttactaagcaataaagtg 8143650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 19171939 - 19171893
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataag 276  Q
    ||||||| |||| ||| |||| |||||||||||||||||||||||||    
T  19171939 gattaggcaagtatactaaattgtttaccaagtaataaagtgataag 19171893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 8319033 - 8319081
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| |||| |||||| |||||||||||||||| ||||||||||||    
T  8319033 agattaggcaagtataccaa-tcgtttaccaagtaatgaagtgataagta 8319081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 12752209 - 12752242
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||||||||||||||||||||||||| |||||    
T  12752209 aagtgtaccaaatcgtttaccaagtaatgaagtg 12752242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 22245344 - 22245377
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagta 263  Q
    ||||||| ||||||||||||||||||||||||||    
T  22245344 gattaggcaagtgtaccaaatcgtttaccaagta 22245377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 271
Target Start/End: Complemental strand, 31286111 - 31286078
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||||||||||| |||||||||||||||||||    
T  31286111 aagtgtaccaaatcatttaccaagtaataaagtg 31286078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 8770022 - 8770061
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  8770022 aagtgtaccaa-tcgttaaccaagtaataaagtgataagta 8770061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 11533072 - 11533032
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||| | |||||||| |||||||||||||||||    
T  11533072 aagtgtaccaaaacatttaccaaataataaagtgataagta 11533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 12411153 - 12411193
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||  |||||||||||||||||||| ||||    
T  12411153 aagtgtaccaaatcacttaccaagtaataaagtgattagta 12411193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 20429704 - 20429752
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| | |||||| |||| ||||||||||||||||| |||||||||    
T  20429704 gattaggcatgtgtactaaattgtttaccaagtaataaaatgataagta 20429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 21303451 - 21303411
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||||||||||| ||||||| |||||||||    
T  21303451 aagtgtatcaaatcgtttaccaaataataaaatgataagta 21303411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 17359156 - 17359203
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17359156 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt 17359203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 23038116 - 23038069
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23038116 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt 23038069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 15544063 - 15544023
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15544063 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 15544023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 21449091 - 21449131
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21449091 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 21449131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 27117823 - 27117775
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  27117823 gattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagta 27117775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 32383102 - 32383058
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  32383102 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 32383058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 278
Target Start/End: Original strand, 22664201 - 22664248
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||    
T  22664201 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagta 22664248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 278
Target Start/End: Original strand, 24281272 - 24281319
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||    
T  24281272 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagta 24281319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 9787984 - 9787936
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  9787984 gattaggcaagtgtaccaaatcatttagcaagtaataaagtgataagta 9787936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 12208603 - 12208643
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  12208603 aagtgtactaaatcgtttaccaagtaataaagtgataagta 12208643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 13345433 - 13345393
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  13345433 aagtgtaccaaattgtttaccaagtaataaagtgataagta 13345393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 17610353 - 17610313
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  17610353 aagtgtaccaaatcgtttaccaagtaataaagttataagta 17610313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 17837511 - 17837559
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  17837511 gattaggcaagtgtaccaaattgtttaccaagtaataaagttataagta 17837559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 18736337 - 18736297
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  18736337 aagtgtaccaaatcgtttaacaagtaataaagtgataagta 18736297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 24306402 - 24306362
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  24306402 aagtgtaccaagtcgtttaccaagtaataaagtgataagta 24306362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 25405727 - 25405687
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  25405727 aagtgtaccaagtcgtttaccaagtaataaagtgataagta 25405687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 15813259 - 15813212
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||||    
T  15813259 gattaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagt 15813212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 16359864 - 16359903
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaa 268  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  16359864 agattaggcaagtgtaccaaatcgtttaccaagtaataaa 16359903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 270
Target Start/End: Original strand, 21847629 - 21847668
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagt 270  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  21847629 attaggcaagtgtaccaaatcgtttaccaagtaataaagt 21847668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 26540892 - 26540931
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  26540892 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg 26540931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 3591758 - 3591713
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||    
T  3591758 gattaggcaagtgtacaaaatcgtttatcaagtaataaagtgataa 3591713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 34480974 - 34481011
Alignment:
Q  241 tgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  34480974 tgtacaaaatcgtttaccaagtaataaagtgataagta 34481011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 12012905 - 12012857
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||| ||||||||||| |||||| ||||||||||||||    
T  12012905 gattaggcaagtgtatcaaatcgtttatcaagtattaaagtgataagta 12012857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 21988079 - 21988039
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  21988079 aagtgtaccaaatcctttaccaaataataaagtgataagta 21988039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 29242521 - 29242561
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  29242521 aagtgtaccaaattgtttatcaagtaataaagtgataagta 29242561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 51473978 - 51473933
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  51473978 attaggaaaatgtaccaaatcgtttacc--gtaataaagtgataagta 51473933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 16179010 - 16179049
Alignment:
Q  239 agtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagta 16179049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 277
Target Start/End: Complemental strand, 26649067 - 26649028
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  26649067 aagtgtatcaaatcgtttaccaagtaataaaatgataagt 26649028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 237 - 276
Target Start/End: Complemental strand, 31236146 - 31236107
Alignment:
Q  237 aaagtgtaccaaatcgtttaccaagtaataaagtgataag 276  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  31236146 aaagtgtaccgaatcgtttactaagtaataaagtgataag 31236107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 268
Target Start/End: Complemental strand, 10064667 - 10064637
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaa 268  Q
    |||||||||||||||||||||||||||||||    
T  10064667 aagtgtaccaaatcgtttaccaagtaataaa 10064637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 33190681 - 33190719
Alignment:
Q  240 gtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  33190681 gtgtaccaaatcgtttatcaagtaataaaatgataagta 33190719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 14779567 - 14779604
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  14779567 aagtgtaccaaatcatttaccaagtaataatgtgataa 14779604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 147624 - 147672
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    |||||||  ||||||| ||||||||||  ||||||||||||||||||||    
T  147624 agattagacaagtgtatcaaatcgtttcacaagtaataaagtgataagt 147672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 16787815 - 16787783
Alignment:
Q  246 caaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||| |||||||||||||||||||||    
T  16787815 caaatcgtttatcaagtaataaagtgataagta 16787783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 18825658 - 18825697
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  18825658 aagtgtaccaa-tcgttgaccaagtaataaagtgataagta 18825697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 278
Target Start/End: Original strand, 24214558 - 24214586
Alignment:
Q  250 tcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||||||    
T  24214558 tcgtttaccaagtaataaagtgataagta 24214586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 25550610 - 25550561
Alignment:
Q  229 agattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  25550610 agattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagta 25550561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 15469930 - 15469974
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgata 274  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  15469930 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgata 15469974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 19086276 - 19086236
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19086276 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 19086236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 20419951 - 20419995
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  20419951 attaggtaagtgtaccaaatcgtttaccaagtaataaagtgataa 20419995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 19051543 - 19051590
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  19051543 gattagaaaagtgtaccaaatcgtttacaaagtaataaagtgataagt 19051590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 17171658 - 17171610
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  17171658 gattaggtaagtgtaccaaatcttttatcaagtaataaagtgataagta 17171610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 18937742 - 18937790
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  18937742 gattaggcaagtgtaccaaatcgtttattaagtaataaagtgataagta 18937790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 19283960 - 19283912
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||| || |||||||||||||| |||||||||||||||||    
T  19283960 gattaggaaagtgcactaaatcgtttaccaaataataaagtgataagta 19283912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 24267058 - 24267018
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  24267058 attaggcaagtgtaccaaatcgtttaccaagtaataaagtg 24267018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 24343689 - 24343649
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  24343689 attaggcaagtgtaccaaatcgtttaccaagtaataaagtg 24343649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 277
Target Start/End: Complemental strand, 19004323 - 19004284
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  19004323 aagtgtactaaatcgtttaccaagtaataaagtgataagt 19004284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 273
Target Start/End: Complemental strand, 24662255 - 24662212
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgat 273  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||    
T  24662255 gattaggtaagtgtaccaaatcgtttatcaagtaataaagtgat 24662212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 23380360 - 23380314
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  23380360 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagta 23380314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 18208353 - 18208312
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  18208353 gattaggcaagtgtaccaaatcgtttacaaagtaataaagtg 18208312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 36175136 - 36175169
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||||||||||||||||||||||||||||||||    
T  36175136 aagtgtaccaaatcgtttaccaagtaataaagtg 36175169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 15375979 - 15375939
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  15375979 aagtgtaccaaatcgtttaccaaataataaaatgataagta 15375939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 268
Target Start/End: Original strand, 15544047 - 15544083
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaa 268  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15544047 ttaggcaagtgtaccaaatcgtttaccaagtaataaa 15544083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 15690772 - 15690819
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||    
T  15690772 gattaggtaagtttaccaaatcgtttaccaa-taataaagtgataagta 15690819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 20744908 - 20744872
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgata 274  Q
    |||||||||||||| ||||||||||||||||||||||    
T  20744908 aagtgtaccaaatcatttaccaagtaataaagtgata 20744872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 24140445 - 24140484
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  24140445 aagtgtaccaa-tcgtttaccaagtaataaagtgataagta 24140484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 269
Target Start/End: Complemental strand, 17769492 - 17769461
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaag 269  Q
    ||||||||||||||||||||||||||||||||    
T  17769492 aagtgtaccaaatcgtttaccaagtaataaag 17769461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 231 - 270
Target Start/End: Original strand, 26120860 - 26120899
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagt 270  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  26120860 attaggaaagtgtaccaaattgtttaccatgtaataaagt 26120899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 32417458 - 32417419
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  32417458 ttaggtaagtgtaccaaatcgtttatcaagtaataaagtg 32417419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 271
Target Start/End: Original strand, 34487638 - 34487673
Alignment:
Q  236 gaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||||||||||||| ||||||||||||||||||||    
T  34487638 gaaagtgtaccaaattgtttaccaagtaataaagtg 34487673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 268
Target Start/End: Complemental strand, 26121428 - 26121390
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaa 268  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  26121428 gattaggcaagtgtaccaaatcgtttagcaagtaataaa 26121390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 271
Target Start/End: Original strand, 28253286 - 28253316
Alignment:
Q  241 tgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||||||||||||||||||||||||||||    
T  28253286 tgtaccaaatcgtttaccaagtaataaagtg 28253316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 17431885 - 17431918
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||||| |||||||||||||||||||||||||    
T  17431885 aagtgtactaaatcgtttaccaagtaataaagtg 17431918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 24852277 - 24852228
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtat 279  Q
    ||||||| |||| ||| |||||| ||||||||||||||| ||||||||||    
T  24852277 gattaggcaagtctactaaatcgattaccaagtaataaaatgataagtat 24852228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 17185465 - 17185505
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||| ||||| |||||||| |||||||||||||||||    
T  17185465 aagtgtactaaatcatttaccaaataataaagtgataagta 17185505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 20315526 - 20315487
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||| |||||||||||||||||| ||||||||||    
T  20315526 aagtgtaccaa-tcgtttaccaagtaataatgtgataagta 20315487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 22755523 - 22755563
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||| |||||||||||||||||| ||| ||||||||    
T  22755523 aagtgtaccgaatcgtttaccaagtaatgaagagataagta 22755563  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 24167689 - 24167649
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagt 270  Q
    ||||||| |||||||  ||||||||||||||||||||||||    
T  24167689 gattaggtaagtgtattaaatcgtttaccaagtaataaagt 24167649  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 34128639 - 34128678
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  34128639 aagtgtaccaa-tcgttgaccaagtaataaagtgataagta 34128678  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 39434465 - 39434504
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||| ||||||||||||||||||| |||||||||    
T  39434465 aagtgtaccaa-tcgtttaccaagtaataaattgataagta 39434504  T

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Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 7516 - 7469
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  7516 attaggaaaatgtactaaatcgtttatcaagtaataaagtgataagta 7469  T

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Target: scaffold0048 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 78589 - 78635
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||    
T  78589 attaggcaagtgtaccatatcgtttaccaagtaataaactgataagt 78635  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 271
Target Start/End: Original strand, 29908 - 29942
Alignment:
Q  237 aaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    |||||||||||||||||||||||||||||||||||    
T  29908 aaagtgtaccaaatcgtttaccaagtaataaagtg 29942  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 12105 - 12151
Alignment:
Q  232 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  12105 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagta 12151  T

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Target: scaffold0620 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 7698 - 7661
Alignment:
Q  237 aaagtgtaccaaatcgtttaccaagtaataaagtgata 274  Q
    |||||||| |||||||||||||||||||||||||||||    
T  7698 aaagtgtatcaaatcgtttaccaagtaataaagtgata 7661  T

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Target: scaffold0063 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 51117 - 51162
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  51117 gattaggcaagtgaaccaaattgtttaccaagtaataaagtgataa 51162  T

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Target: scaffold0838 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 2372 - 2412
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  2372 aagtgtaccaaatcgtttaccaaataataaagggataagta 2412  T

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Target: scaffold0832 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 2403 - 2443
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  2403 aagtgtaccaaatcgtttaccaaataataaagggataagta 2443  T

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Target: scaffold0672 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 1728 - 1776
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| ||||||||||||  ||||||||||||| |||||||||||||    
T  1728 gattaggtaagtgtaccaaactgtttaccaagtaaaaaagtgataagta 1776  T

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Target: scaffold0054 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 72074 - 72114
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  72074 aagtgtaccaaattgttaaccaagtaataaagtgataagta 72114  T

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Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 69915 - 69955
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  69915 aagtgtaccaaatcatttaccaagtaataaagtgacaagta 69955  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 39578 - 39626
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||||||| ||||  ||||||||||||||||||||||||||    
T  39578 gattaggcaagtgtacaaaattatttaccaagtaataaagtgataagta 39626  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 81481 - 81529
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||| |||| ||| |||||||||||||| |||||||||||||||||    
T  81481 gattaggcaagtttacgaaatcgtttaccaaataataaagtgataagta 81529  T

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Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 69076 - 69122
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagt 277  Q
    ||||||| |||||||||||||| || ||||||||||||||||||||||    
T  69076 gattaggcaagtgtaccaaatcatt-accaagtaataaagtgataagt 69122  T

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Target: scaffold0650 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 231 - 278
Target Start/End: Original strand, 6282 - 6329
Alignment:
Q  231 attaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    |||||| ||||||| |||||||||||| |||||||||||| |||||||    
T  6282 attaggcaagtgtatcaaatcgtttacgaagtaataaagtcataagta 6329  T

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Target: scaffold0638 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 922 - 880
Alignment:
Q  235 ggaaagtgtaccaaatcgtttaccaagtaataaagtgataagta 278  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  922 ggaaagtgtactaaatcgtt-accaagtaataaagtgataagta 880  T

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Target: scaffold0957 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 3147 - 3188
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||||| |||||||| |||| ||||||||||||||||||||    
T  3147 gattaggcaagtgtacaaaattgtttaccaagtaataaagtg 3188  T

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Target: scaffold0043 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 271
Target Start/End: Complemental strand, 89950 - 89917
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtg 271  Q
    ||||||| ||||||||||||||||||||||||||    
T  89950 aagtgtatcaaatcgtttaccaagtaataaagtg 89917  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 181802 - 181765
Alignment:
Q  238 aagtgtaccaaatcgtttaccaagtaataaagtgataa 275  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  181802 aagtgtaccaaatcaattaccaagtaataaagtgataa 181765  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 15570 - 15530
Alignment:
Q  230 gattaggaaagtgtaccaaatcgtttaccaagtaataaagt 270  Q
    ||||||| ||||||| |||||| ||||||||||||||||||    
T  15570 gattaggcaagtgtatcaaatcatttaccaagtaataaagt 15530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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