View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18709_low_20 (Length: 287)
Name: NF18709_low_20
Description: NF18709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18709_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 12 - 274
Target Start/End: Original strand, 43487205 - 43487467
Alignment:
| Q |
12 |
aattcttgactattgtaaaatgcaaaagtttaataacatgataaactaattaaagaactaaagcatagataatgtatataattcatgttaagagtaaaat |
111 |
Q |
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| T |
43487205 |
aattcttgactattgtaaaatgcaaaagtttaataacatgataaactaattaaagaactaaagcatagataatgtatataattcatgttaagagtaaaat |
43487304 |
T |
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| Q |
112 |
tcatgaccaacccagtaggatctttcaagctaataggttgccaacacataggacattgggagcttctttgacccctacaaataagagcaaataccaattg |
211 |
Q |
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| T |
43487305 |
tcatgaccaacccagtaggatctttcaagctaataggttgccaacacataggacattgggagcttctttgacccctacaaataagagcaaataccaattg |
43487404 |
T |
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| Q |
212 |
cttaagcatatctgttcattttgaaatatttttatgaaaatttagactttaagatgtaattag |
274 |
Q |
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| T |
43487405 |
cttaagcatatttgttcattttgaaatatttttatgaaaatttagactttaagatgtaattag |
43487467 |
T |
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