View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1870_low_33 (Length: 204)
Name: NF1870_low_33
Description: NF1870
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1870_low_33 |
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Alignment Details
Target: chr6 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 31 - 188
Target Start/End: Original strand, 33712716 - 33712873
Alignment:
| Q |
31 |
ttagggactccttattcaatacattgatttttgaaaagactcaacaatagaaaaatataaaattaattgaaaatcaatttctctcaatgttggacctatt |
130 |
Q |
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| T |
33712716 |
ttagggactccttattcaatacattgatttttgaaaagactcaacaatagaaaaatataaaattaattgaaaatcaatttctctcaatgttggacctatt |
33712815 |
T |
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| Q |
131 |
caagattcattgcaccaaaatttattactaatgtacaacagaattaagtggacagaac |
188 |
Q |
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| T |
33712816 |
caagattcattgcaccaaaatttattactaatgtacaacagaattaagtggacagaac |
33712873 |
T |
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