View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1870_low_9 (Length: 355)
Name: NF1870_low_9
Description: NF1870
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1870_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 37 - 340
Target Start/End: Original strand, 36568080 - 36568383
Alignment:
| Q |
37 |
aacaacaataaccatacctttttccactatcatcatcatatttcctcttcttcaccaccttctcctcctctaagagaagaactacctcttttaaacctaa |
136 |
Q |
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| T |
36568080 |
aacaacaataaccatacctttttccactatcatcatcatatttcctcttcttcaccaccttctcctcctctaagagaagaactacctcttttaaacctaa |
36568179 |
T |
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| Q |
137 |
ttccaacaaaacaagaaaaatatgatgaagatcaacaagaacatgaggtggatattcaagaccttccttgcactgccatggatttagaagaaagggaaga |
236 |
Q |
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| T |
36568180 |
ttccaacaaaacaagaaaaatatgatgaagatcaacaagaacatgaggtggatattcaagaccttccttgcactgccatggatttagaagaaagggaaga |
36568279 |
T |
|
| Q |
237 |
agatggtagtagtagaactactactgttactgttgcacttcacataggtttgccaaaccctagtgctgctgaaatggcttctgtactttcttcctctaat |
336 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36568280 |
agatggtagtagtagaactactactgttactgttgcacttcacataggtttgccaaaccctagtgctgctgaaatggcttctgtactttcttcctctaat |
36568379 |
T |
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| Q |
337 |
aact |
340 |
Q |
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|||| |
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| T |
36568380 |
aact |
36568383 |
T |
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