View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18710_low_12 (Length: 233)
Name: NF18710_low_12
Description: NF18710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18710_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 212
Target Start/End: Original strand, 36192578 - 36192773
Alignment:
| Q |
17 |
cagattcacctccttcatttccctccccttattctccatcttactagcttcaattccattcataacagaatccaaatgcacaaaaggctgttcacttgct |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36192578 |
cagattcacctccttcatttccctccccttattctccatctttctagcttcaattccattcataacagaatccaaatgcacaaaaggctgttcacttgct |
36192677 |
T |
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| Q |
117 |
ttagccaacttttatgtatcccaaggctccaacctcacttatatttcaagtaagccaccttattacttctaataaatactctcgttgccaccagac |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36192678 |
ttagccaacttttatgtatcccaaggctccaacctcacttatatttcaagtaagccaccttattacttctaataaatactctcgttgccaccagac |
36192773 |
T |
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