View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18714_high_22 (Length: 244)
Name: NF18714_high_22
Description: NF18714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18714_high_22 |
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Alignment Details
Target: chr2 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 27644130 - 27643943
Alignment:
| Q |
20 |
attgcggtcacggatgtgattgcgctcattacagtttaatagtgtgaagatttgaaccaaaatggctgaaatcctctgatgtggttcatgatttggtcac |
119 |
Q |
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| T |
27644130 |
attgcggtcacagatgtgattgtgctcattacagtttaatagtgtgaagatttgaaccaaaatggctgaaatcctctgatgtggttcatgatttggtcac |
27644031 |
T |
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| Q |
120 |
aatccggctgtacacatgattgaaaatcgcgctgcaatgttgcgaggatattataacagcaacattgcgacaacaacaacatctctgc |
207 |
Q |
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| T |
27644030 |
aatccggttgtacgcatgattgaaaatcacactgcaatgttgcgaggatattataacagcaacattgcgacaagaacaacatctctgc |
27643943 |
T |
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