View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18714_low_21 (Length: 251)
Name: NF18714_low_21
Description: NF18714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18714_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 31059237 - 31059462
Alignment:
| Q |
9 |
gaagaatatgatgaaatctgttgaagatgaaaaaatgaaggttccttttcctttgttcattaagcctaagcaaaaggagaaacctcctctttttgatttg |
108 |
Q |
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|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31059237 |
gaagaaaatgatgaaatctgtggaagatgaaaaaatgaaggttccttttcctttgttcattaagcctaagcaaaaggagaaacctcctctttttgatttg |
31059336 |
T |
|
| Q |
109 |
tctgaagccattcgccaagttaaggtatggaaagagattattacccttcattctatcattcattttgtaataattcattggtgattggcctatgttactt |
208 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |
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| T |
31059337 |
tctgaagccattcgccaagttaaggtacggaaagagattattacccttcattctatcattcattttgtaataattcattcgtgattggcctgtgttactt |
31059436 |
T |
|
| Q |
209 |
aatttttaacccatttaagtagaatt |
234 |
Q |
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|||||||||||||||||||||||||| |
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| T |
31059437 |
aatttttaacccatttaagtagaatt |
31059462 |
T |
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