View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18714_low_31 (Length: 224)

Name: NF18714_low_31
Description: NF18714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18714_low_31
NF18714_low_31
[»] chr8 (11 HSPs)
chr8 (51-208)||(16398885-16399035)
chr8 (20-121)||(27475527-27475627)
chr8 (15-55)||(15961324-15961364)
chr8 (16-55)||(23353620-23353659)
chr8 (17-55)||(6299019-6299057)
chr8 (18-55)||(995815-995852)
chr8 (18-55)||(10478129-10478166)
chr8 (18-55)||(18175573-18175610)
chr8 (18-55)||(30473884-30473921)
chr8 (18-55)||(32110861-32110898)
chr8 (23-55)||(11142659-11142691)
[»] chr5 (13 HSPs)
chr5 (18-119)||(1671836-1671936)
chr5 (17-57)||(8179752-8179792)
chr5 (13-55)||(20874880-20874922)
chr5 (14-55)||(20655045-20655086)
chr5 (16-55)||(34110844-34110883)
chr5 (16-55)||(40177233-40177272)
chr5 (17-107)||(3006629-3006719)
chr5 (17-55)||(17373160-17373198)
chr5 (18-55)||(2398942-2398979)
chr5 (18-55)||(10729442-10729479)
chr5 (18-55)||(16526306-16526343)
chr5 (18-55)||(34107338-34107375)
chr5 (18-55)||(38246865-38246902)
[»] chr1 (12 HSPs)
chr1 (25-99)||(21981173-21981247)
chr1 (13-55)||(29942210-29942252)
chr1 (16-55)||(4266573-4266612)
chr1 (18-53)||(21219660-21219695)
chr1 (16-55)||(38913745-38913784)
chr1 (17-55)||(1231988-1232026)
chr1 (17-55)||(2951365-2951403)
chr1 (18-55)||(9216223-9216260)
chr1 (18-55)||(18855233-18855270)
chr1 (18-55)||(31018200-31018237)
chr1 (18-55)||(34888686-34888723)
chr1 (18-54)||(26497649-26497685)
[»] chr7 (12 HSPs)
chr7 (18-71)||(40966404-40966456)
chr7 (16-55)||(13786362-13786401)
chr7 (18-57)||(27903417-27903456)
chr7 (17-55)||(21342015-21342053)
chr7 (17-55)||(38163338-38163376)
chr7 (18-55)||(16376545-16376582)
chr7 (18-55)||(21804572-21804609)
chr7 (18-55)||(31373648-31373685)
chr7 (18-55)||(33916947-33916984)
chr7 (18-55)||(40969083-40969120)
chr7 (18-55)||(42242154-42242191)
chr7 (15-55)||(21670173-21670213)
[»] chr6 (10 HSPs)
chr6 (13-70)||(4157747-4157804)
chr6 (16-55)||(8539745-8539784)
chr6 (17-55)||(28099596-28099634)
chr6 (17-55)||(33646134-33646172)
chr6 (18-55)||(162669-162706)
chr6 (18-55)||(2266968-2267005)
chr6 (16-53)||(2965457-2965494)
chr6 (18-55)||(3593085-3593122)
chr6 (18-55)||(12597265-12597302)
chr6 (15-55)||(15044914-15044954)
[»] chr3 (15 HSPs)
chr3 (15-55)||(26948990-26949030)
chr3 (17-55)||(3898614-3898652)
chr3 (17-55)||(21098496-21098534)
chr3 (17-55)||(34121547-34121585)
chr3 (17-55)||(40014652-40014690)
chr3 (17-55)||(49672754-49672792)
chr3 (18-55)||(1941720-1941757)
chr3 (18-55)||(4584434-4584471)
chr3 (18-55)||(6460168-6460205)
chr3 (18-55)||(12264392-12264429)
chr3 (18-55)||(36076454-36076491)
chr3 (18-55)||(38653927-38653964)
chr3 (18-55)||(43363611-43363648)
chr3 (18-55)||(54073222-54073259)
chr3 (14-54)||(25437286-25437326)
[»] chr4 (11 HSPs)
chr4 (16-55)||(12090457-12090496)
chr4 (16-55)||(33139469-33139508)
chr4 (17-55)||(30824921-30824959)
chr4 (17-55)||(37651858-37651896)
chr4 (18-55)||(16904952-16904989)
chr4 (18-55)||(18209703-18209740)
chr4 (18-47)||(26724144-26724173)
chr4 (18-55)||(31965969-31966006)
chr4 (18-55)||(37590804-37590841)
chr4 (18-55)||(52434816-52434853)
chr4 (18-55)||(53143262-53143299)
[»] chr2 (9 HSPs)
chr2 (16-55)||(2988913-2988952)
chr2 (16-55)||(41664702-41664741)
chr2 (17-55)||(44902273-44902311)
chr2 (18-55)||(6120744-6120781)
chr2 (18-55)||(8700453-8700490)
chr2 (18-55)||(18351743-18351780)
chr2 (18-55)||(19596363-19596400)
chr2 (18-55)||(20545017-20545054)
chr2 (18-55)||(27944796-27944833)
[»] scaffold0022 (1 HSPs)
scaffold0022 (17-55)||(149049-149087)
[»] scaffold0031 (1 HSPs)
scaffold0031 (18-55)||(46466-46503)


Alignment Details
Target: chr8 (Bit Score: 87; Significance: 7e-42; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 51 - 208
Target Start/End: Complemental strand, 16399035 - 16398885
Alignment:
Q  51 atatataattctaaacattacttacctcttttattaaaaactataggtgcgaaatataatccggtcttttannnnnnngagtgaatcatccggactttta 150  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||       | ||||||||||| ||||||||    
T  16399035 atatatagttctaaacattacctaccttttttattaaaaactataggtgcgaaatataatccggtcttttatttttttgggtgaatcatccagactttta 16398936  T
Q  151 taaaaacacatgttataacttatacgtatatacaataattgtttagtataaaaaagct 208  Q
    ||||||||||||       ||||||||| |||||||||||||||||||||||||||||    
T  16398935 taaaaacacatg-------ttatacgtacatacaataattgtttagtataaaaaagct 16398885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 27475627 - 27475527
Alignment:
Q  20 tagacttttcacccgtgctgccgcacggatcatatataattctaaacattacttacctcttttattaaaaactataggtgcgaaatataatccggtcttt 119  Q
    ||||||||| |||| ||||| |||||| |||||||||||||||||||||||| | |   |||||||||||| |||||||| ||||||| ||  |||||||    
T  27475627 tagactttttacccatgctgtcgcacgaatcatatataattctaaacattacctgcactttttattaaaaa-tataggtgtgaaatatcatgtggtcttt 27475529  T
Q  120 ta 121  Q
    ||    
T  27475528 ta 27475527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 15961364 - 15961324
Alignment:
Q  15 aatactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  15961364 aatactagactttccacccgtgctgccgcacgggtcatata 15961324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 23353620 - 23353659
Alignment:
Q  16 atactagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  23353620 atactagactttccacccgtgctgccgcacgggtcatata 23353659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 6299019 - 6299057
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  6299019 tactagactttccacccgtgctgccgcacgggtcatata 6299057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 995815 - 995852
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  995815 actagactttccacccgtgctgccgcacgggtcatata 995852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 10478166 - 10478129
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  10478166 actagactttccacccgtgctgccgcacgggtcatata 10478129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 18175610 - 18175573
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  18175610 actagactttccacccgtgctgccgcacgggtcatata 18175573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 30473884 - 30473921
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  30473884 actagactttccacccgtgctgccgcacgggtcatata 30473921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 32110861 - 32110898
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  32110861 actagactttccacccgtgctgccgcacgggtcatata 32110898  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 11142691 - 11142659
Alignment:
Q  23 acttttcacccgtgctgccgcacggatcatata 55  Q
    ||||| |||||||||||||||||||||||||||    
T  11142691 actttccacccgtgctgccgcacggatcatata 11142659  T

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Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 1671836 - 1671936
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatatataattctaaacattacttacctcttttattaaaaactataggtgcgaaatataatccggtct 117  Q
    ||||||||||| ||||||| || ||||||  ||||||||| ||||||||||||| | |   |||||||||||| ||||| |||||||||| |||||||||    
T  1671836 actagactttttacccgtgttgtcgcacgagtcatatatagttctaaacattacatgcactttttattaaaaa-tatagctgcgaaatatcatccggtct 1671934  T
Q  118 tt 119  Q
    ||    
T  1671935 tt 1671936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 8179752 - 8179792
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatatata 57  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  8179752 tactagactttccacccgtgctgccgcacggatcatatata 8179792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 20874922 - 20874880
Alignment:
Q  13 ataatactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||||||| ||||||||||||||||||| |||||||    
T  20874922 ataatactagactttccacccgtgctgccgcacgggtcatata 20874880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 20655045 - 20655086
Alignment:
Q  14 taatactagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  20655045 taatactagactttccacccgtgctgccgcacgggtcatata 20655086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 34110883 - 34110844
Alignment:
Q  16 atactagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  34110883 atactagactttccacccgtgctgccgcacgggtcatata 34110844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 40177272 - 40177233
Alignment:
Q  16 atactagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  40177272 atactagactttccacccgtgctgccgcacgggtcatata 40177233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 3006719 - 3006629
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatatataattctaaacattacttacctcttttattaaaaactataggtgcgaaatat 107  Q
    |||||||||||||| ||||  |||||||| | ||||||||| | | ||||||||| | |   |||||||||||| ||||||||||| ||||    
T  3006719 tactagacttttcatccgtcttgccgcacaggtcatatatagtacaaaacattacctgcactttttattaaaaaatataggtgcgatatat 3006629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 17373160 - 17373198
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  17373160 tactagactttccacccgtgctgccgcacgggtcatata 17373198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 2398942 - 2398979
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  2398942 actagactttccacccgtgctgccgcacgggtcatata 2398979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 10729442 - 10729479
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  10729442 actagactttccacccgtgctgccgcacgggtcatata 10729479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 16526306 - 16526343
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  16526306 actagactttccacccgtgctgccgcacgggtcatata 16526343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 34107338 - 34107375
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  34107338 actagactttccacccgtgctgccgcacgggtcatata 34107375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 38246865 - 38246902
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  38246865 actagactttccacccgtgctgccgcacgggtcatata 38246902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 21981247 - 21981173
Alignment:
Q  25 ttttcacccgtgctgccgcacggatcatatataattctaaacattacttacctcttttattaaaaactataggtg 99  Q
    ||||||||||||||||||||||| ||||| ||| ||| ||||||||| | |   |||||||||||| ||||||||    
T  21981247 ttttcacccgtgctgccgcacgggtcatagatagttcaaaacattacctgcactttttattaaaaaatataggtg 21981173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 29942252 - 29942210
Alignment:
Q  13 ataatactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||||||| ||||||||||||||||||| |||||||    
T  29942252 ataatactagactttccacccgtgctgccgcacgggtcatata 29942210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 4266612 - 4266573
Alignment:
Q  16 atactagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  4266612 atactagactttccacccgtgctgccgcacgggtcatata 4266573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 21219660 - 21219695
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcata 53  Q
    |||||||| |||||||||||||||||||||||||||    
T  21219660 actagactattcacccgtgctgccgcacggatcata 21219695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 38913745 - 38913784
Alignment:
Q  16 atactagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  38913745 atactagactttccacccgtgctgccgcacgggtcatata 38913784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 1232026 - 1231988
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  1232026 tactagactttccacccgtgctgccgcacgggtcatata 1231988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 2951365 - 2951403
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  2951365 tactagactttccacccgtgctgccgcacgggtcatata 2951403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 9216260 - 9216223
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  9216260 actagactttccacccgtgctgccgcacgggtcatata 9216223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 18855233 - 18855270
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  18855233 actagactttccacccgtgctgccgcacgggtcatata 18855270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 31018200 - 31018237
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  31018200 actagactttccacccgtgctgccgcacgggtcatata 31018237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 34888686 - 34888723
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  34888686 actagactttccacccgtgctgccgcacgggtcatata 34888723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 26497685 - 26497649
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatat 54  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  26497685 actagactttgcacccgtgctgccgcacgggtcatat 26497649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 40966456 - 40966404
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatatataattctaaacattac 71  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||| |||||||||    
T  40966456 actagacttttcacc-gtgctgccgcacgggtcatatatagttcaaaacattac 40966404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 13786401 - 13786362
Alignment:
Q  16 atactagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  13786401 atactagactttccacccgtgctgccgcacgggtcatata 13786362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 27903417 - 27903456
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatatata 57  Q
    |||||||||| ||||||||||||||||||| |||||||||    
T  27903417 actagactttccacccgtgctgccgcacgggtcatatata 27903456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 21342053 - 21342015
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  21342053 tactagactttccacccgtgctgccgcacgggtcatata 21342015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 38163338 - 38163376
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  38163338 tactagactttccacccgtgctgccgcacgggtcatata 38163376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 16376545 - 16376582
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  16376545 actagactttccacccgtgctgccgcacgggtcatata 16376582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 21804572 - 21804609
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  21804572 actagactttccacccgtgctgccgcacgggtcatata 21804609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 31373685 - 31373648
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  31373685 actagactttccacccgtgctgccgcacgggtcatata 31373648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 33916947 - 33916984
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  33916947 actagactttccacccgtgctgccgcacgggtcatata 33916984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 40969120 - 40969083
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  40969120 actagactttccacccgtgctgccgcacgggtcatata 40969083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 42242154 - 42242191
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  42242154 actagactttccacccgtgctgccgcacgggtcatata 42242191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 21670213 - 21670173
Alignment:
Q  15 aatactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||||| ||||||||||||||||| | |||||||    
T  21670213 aatactagactttccacccgtgctgccgcacaggtcatata 21670173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 4157747 - 4157804
Alignment:
Q  13 ataatactagacttttcacccgtgctgccgcacggatcatatataattctaaacatta 70  Q
    |||| ||||||||||||||| | |||||||||||| ||||||||| ||| ||||||||    
T  4157747 ataaaactagacttttcacctgggctgccgcacgggtcatatatagttcaaaacatta 4157804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 8539784 - 8539745
Alignment:
Q  16 atactagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  8539784 atactagactttccacccgtgctgccgcacgggtcatata 8539745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 28099596 - 28099634
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  28099596 tactagactttccacccgtgctgccgcacgggtcatata 28099634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 33646172 - 33646134
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  33646172 tactagactttccacccgtgctgccgcacgggtcatata 33646134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 162669 - 162706
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  162669 actagactttccacccgtgctgccgcacgggtcatata 162706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 2267005 - 2266968
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  2267005 actagactttccacccgtgctgccgcacgggtcatata 2266968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 2965457 - 2965494
Alignment:
Q  16 atactagacttttcacccgtgctgccgcacggatcata 53  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  2965457 atactagacttatcacccgtgctgccgcacgggtcata 2965494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 3593122 - 3593085
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  3593122 actagactttccacccgtgctgccgcacgggtcatata 3593085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 12597265 - 12597302
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  12597265 actagactttccacccgtgctgccgcacgggtcatata 12597302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 15044954 - 15044914
Alignment:
Q  15 aatactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||||| ||||||||||||||||| | |||||||    
T  15044954 aatactagactttccacccgtgctgccgcacaggtcatata 15044914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 26949030 - 26948990
Alignment:
Q  15 aatactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  26949030 aatactagactttccacccgtgctgccgcacgggtcatata 26948990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 3898652 - 3898614
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  3898652 tactagactttccacccgtgctgccgcacgggtcatata 3898614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 21098534 - 21098496
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  21098534 tactagactttccacccgtgctgccgcacgggtcatata 21098496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 34121585 - 34121547
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  34121585 tactagactttccacccgtgctgccgcacgggtcatata 34121547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 40014652 - 40014690
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  40014652 tactagactttccacccgtgctgccgcacgggtcatata 40014690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 49672792 - 49672754
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  49672792 tactagactttccacccgtgctgccgcacgggtcatata 49672754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 1941720 - 1941757
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  1941720 actagactttccacccgtgctgccgcacgggtcatata 1941757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 4584434 - 4584471
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  4584434 actagactttccacccgtgctgccgcacgggtcatata 4584471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 6460168 - 6460205
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  6460168 actagactttccacccgtgctgccgcacgggtcatata 6460205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 12264429 - 12264392
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  12264429 actagactttccacccgtgctgccgcacgggtcatata 12264392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 36076454 - 36076491
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  36076454 actagactttccacccgtgctgccgcacgggtcatata 36076491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 38653927 - 38653964
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  38653927 actagactttccacccgtgctgccgcacgggtcatata 38653964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 43363611 - 43363648
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  43363611 actagactttccacccgtgctgccgcacgggtcatata 43363648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 54073259 - 54073222
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  54073259 actagactttccacccgtgctgccgcacgggtcatata 54073222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 25437326 - 25437286
Alignment:
Q  14 taatactagacttttcacccgtgctgccgcacggatcatat 54  Q
    ||||||||||| || ||||||||||||||||||| ||||||    
T  25437326 taatactagaccttgcacccgtgctgccgcacgggtcatat 25437286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000005; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 12090457 - 12090496
Alignment:
Q  16 atactagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  12090457 atactagactttccacccgtgctgccgcacgggtcatata 12090496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 33139469 - 33139508
Alignment:
Q  16 atactagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  33139469 atactagactttccacccgtgctgccgcacgggtcatata 33139508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 30824921 - 30824959
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  30824921 tactagactttccacccgtgctgccgcacgggtcatata 30824959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 37651896 - 37651858
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  37651896 tactagactttccacccgtgctgccgcacgggtcatata 37651858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 16904952 - 16904989
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  16904952 actagactttccacccgtgctgccgcacgggtcatata 16904989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 18209740 - 18209703
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  18209740 actagactttccacccgtgctgccgcacgggtcatata 18209703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 26724173 - 26724144
Alignment:
Q  18 actagacttttcacccgtgctgccgcacgg 47  Q
    ||||||||||||||||||||||||||||||    
T  26724173 actagacttttcacccgtgctgccgcacgg 26724144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 31965969 - 31966006
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  31965969 actagactttccacccgtgctgccgcacgggtcatata 31966006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 37590804 - 37590841
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  37590804 actagactttccacccgtgctgccgcacgggtcatata 37590841  T

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Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 52434853 - 52434816
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  52434853 actagactttccacccgtgctgccgcacgggtcatata 52434816  T

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Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 53143262 - 53143299
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  53143262 actagatttttcacccgtgctgccgcacgggtcatata 53143299  T

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Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 2988952 - 2988913
Alignment:
Q  16 atactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  2988952 atactagacttttcacccgtgctgccgcatgggtcatata 2988913  T

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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 41664741 - 41664702
Alignment:
Q  16 atactagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  41664741 atactagactttccacccgtgctgccgcacgggtcatata 41664702  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 44902311 - 44902273
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  44902311 tactagactttccacccgtgctgccgcacgggtcatata 44902273  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 6120781 - 6120744
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  6120781 actagactttccacccgtgctgccgcacgggtcatata 6120744  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 8700490 - 8700453
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  8700490 actagactttccacccgtgctgccgcacgggtcatata 8700453  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 18351780 - 18351743
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  18351780 actagactttccacccgtgctgccgcacgggtcatata 18351743  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 19596363 - 19596400
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  19596363 actagactttccacccgtgctgccgcacgggtcatata 19596400  T

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Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 20545054 - 20545017
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  20545054 actagactttccacccgtgctgccgcacgggtcatata 20545017  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 27944796 - 27944833
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  27944796 actagactttccacccgtgctgccgcacgggtcatata 27944833  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 149049 - 149087
Alignment:
Q  17 tactagacttttcacccgtgctgccgcacggatcatata 55  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  149049 tactagactttccacccgtgctgccgcacgggtcatata 149087  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 46503 - 46466
Alignment:
Q  18 actagacttttcacccgtgctgccgcacggatcatata 55  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  46503 actagactttccacccgtgctgccgcacgggtcatata 46466  T

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