View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18715_high_15 (Length: 241)
Name: NF18715_high_15
Description: NF18715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18715_high_15 |
 |  |
|
| [»] scaffold0400 (2 HSPs) |
 |  |  |
|
| [»] scaffold0365 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 15009631 - 15009416
Alignment:
| Q |
1 |
gaacaactccgtacaagaagttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
15009631 |
gaacaactccgtacaagaagttgtttgttaaaactaaagtgtggatttttggaagtgatgagaagttgagactctgaagtgtaccttttagtccaatatt |
15009532 |
T |
 |
| Q |
101 |
ggtgagatttaccttgttgatggactttgattcataatcacacgtgattccttcccaaccacaaggattattaccaatccatgaagagagaaatgccctg |
200 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15009531 |
ggtgagatttaccttgttgatggacttcgattcataatcacacgtgattccttcccaaccacaaggattattaccaatccatgaagagagaaatgccctg |
15009432 |
T |
 |
| Q |
201 |
ctatggttgtcaaggc |
216 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
15009431 |
ctatggttgtcaaggc |
15009416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 15030729 - 15030514
Alignment:
| Q |
1 |
gaacaactccgtacaagaagttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
15030729 |
gaacaactccgtacaagaagttgtttgttaaaactaaagtgtggatttttggaagtgatgagaagttgagactctgaagtgtaccttttagtccaatatt |
15030630 |
T |
 |
| Q |
101 |
ggtgagatttaccttgttgatggactttgattcataatcacacgtgattccttcccaaccacaaggattattaccaatccatgaagagagaaatgccctg |
200 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15030629 |
ggtgagatttaccttgttgatggacttcgattcataatcacacgtgattccttcccaaccacaaggattattaccaatccatgaagagagaaatgccctg |
15030530 |
T |
 |
| Q |
201 |
ctatggttgtcaaggc |
216 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
15030529 |
ctatggttgtcaaggc |
15030514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 15023744 - 15023533
Alignment:
| Q |
5 |
aactccgtacaagaagttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatattggtg |
104 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||| |
|
|
| T |
15023744 |
aactccatacaaggagttgtttgttaaaactaaggtgtgtattttcggaagtgatgagaaattgagactttgaagagtaccgtttaatccaatattggtg |
15023645 |
T |
 |
| Q |
105 |
agatttaccttgttgatggactttgattcataatcacacgtgattccttcccaaccacaaggattattaccaatccatgaagagagaaatgccctgctat |
204 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15023644 |
agatttaccttgttgatggacttcgattcataatcacacgtgattccttcccaaccacaaggattattaccaatccatgaagagagaaatgccctgctat |
15023545 |
T |
 |
| Q |
205 |
ggttgtcaaggc |
216 |
Q |
| |
|
|||||||||||| |
|
|
| T |
15023544 |
ggttgtcaaggc |
15023533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 14534586 - 14534804
Alignment:
| Q |
1 |
gaacaactccgtacaagaagttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
14534586 |
gaacaactccgtacaagaagttgtttgttaaaactaaagtgtggatttttgtaagtgatgagaaattgagactttgaagcgtaccttttagtccaatatc |
14534685 |
T |
 |
| Q |
101 |
ggtgagatttaccttgttgatggactttgattcataatcacacgtgattccttccca---accacaaggattattaccaatccatgaagagagaaatgcc |
197 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||| ||||||||||||||||| || || |
|
|
| T |
14534686 |
agtgagatttaccttgttgatggactttgatttataatcacacgtgattccttcccaactactacaaggattattgccaatccatgaagagagcaaagca |
14534785 |
T |
 |
| Q |
198 |
ctgctatggttgtcaaggc |
216 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
14534786 |
ttgctatggttgtcaaggc |
14534804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 15001028 - 15000810
Alignment:
| Q |
1 |
gaacaactccgtacaagaagttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatatt |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
15001028 |
gaacaactccgtgcaagaagttgtttgttaaaactaaggtgtggatttttgtaagtgatgagaaattgagagtttgaagcgtaccttttagtccaatatt |
15000929 |
T |
 |
| Q |
101 |
ggtgagatttaccttgttgatggactttgattcataatcacacgtgattccttccca---accacaaggattattaccaatccatgaagagagaaatgcc |
197 |
Q |
| |
|
||||||||||| | |||||||||| ||||||| |||||||||||||||||||||||| || |||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
15000928 |
ggtgagatttatcatgttgatggattttgattgataatcacacgtgattccttcccaactactacaaggattattgccaatccatgaagagagcaatgcc |
15000829 |
T |
 |
| Q |
198 |
ctgctatggttgtcaaggc |
216 |
Q |
| |
|
||||| ||||||||||||| |
|
|
| T |
15000828 |
ctgctgtggttgtcaaggc |
15000810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 213
Target Start/End: Complemental strand, 15016026 - 15015819
Alignment:
| Q |
9 |
ccgtacaagaagttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatattggtgagat |
108 |
Q |
| |
|
||||||| |||||||||| |||||||||| || ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
15016026 |
ccgtacaggaagttgtttcttaaaactaaggtacggatttttggaagtgatgagaaattgagactttgaagtgtaccttttagtccaatattggtgagat |
15015927 |
T |
 |
| Q |
109 |
ttaccttgttgatggactttgattcataatcacacgtgattccttccca---accacaaggattattaccaatccatgaagagagaaatgccctgctatg |
205 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||||| |||||||||||||| || |||||||||||||||||||||||||||||| ||||| |||| || |
|
|
| T |
15015926 |
ttaccttgttgatggattttgaatcatcatcacatgtgattccttcccagctactacaaggattattaccaatccatgaagagagtaatgctttgctttg |
15015827 |
T |
 |
| Q |
206 |
gttgtcaa |
213 |
Q |
| |
|
|||||||| |
|
|
| T |
15015826 |
gttgtcaa |
15015819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 216
Target Start/End: Complemental strand, 14502163 - 14501966
Alignment:
| Q |
19 |
agttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatattggtgagatttaccttgtt |
118 |
Q |
| |
|
|||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
14502163 |
agttgttttttaaaactaaggtgcggatttttggaagtgatgataaattgagactttgaagcgtaccttttagtccaatatcagtgagatttaccttgtt |
14502064 |
T |
 |
| Q |
119 |
gatggactttgattcataatcacacgtgattccttcccaaccacaaggattattaccaatccatgaagagagaaatgccctgctatggttgtcaaggc |
216 |
Q |
| |
|
|||||| ||||| |||| |||||| |||||||||||||||| |||||||||||||||| |||||||||| || |||||||| || | ||||||||||| |
|
|
| T |
14502063 |
gatggattttgaatcattatcacatgtgattccttcccaactacaaggattattaccattccatgaagaaagcaatgccctactgttgttgtcaaggc |
14501966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 51 - 216
Target Start/End: Complemental strand, 15035457 - 15035289
Alignment:
| Q |
51 |
ggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatattggtgagatttaccttgttgatggactttgattcataatcacacgtgattc |
150 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| ||||||| |
|
|
| T |
15035457 |
ggaagtgatgagaaattgagagtttgaagcgtaccttttagtccaatattggtgagatttaccttgttgatggattttgaatcatcatcacatgtgattc |
15035358 |
T |
 |
| Q |
151 |
cttccca---accacaaggattattaccaatccatgaagagagaaatgccctgctatggttgtcaaggc |
216 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||||||| ||||||||| | ||||||||||||| |
|
|
| T |
15035357 |
cttcccaactactacaaggattattaccaatccatgaagagagcaatgccctgttgtggttgtcaaggc |
15035289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 5 - 213
Target Start/End: Complemental strand, 14466073 - 14465862
Alignment:
| Q |
5 |
aactccgtacaagaagttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatattggtg |
104 |
Q |
| |
|
|||||| || ||| |||||||| | |||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
14466073 |
aactccatagaaggagttgtttctcaaaactaattcttggatttttggaagtgatgagaaattgagagtttgaagcgtaccttttagtccaatattggtg |
14465974 |
T |
 |
| Q |
105 |
agatttaccttgttgatggactttgattcataatcacacgtgattccttccca---accacaaggattattaccaatccatgaagagagaaatgccctgc |
201 |
Q |
| |
|
||||||||||||| ||| || |||||||||| |||||| |||||||||||||| || |||||||||||||||||||||||||||||| | || | ||| |
|
|
| T |
14465973 |
agatttaccttgtagattgattttgattcatcatcacatgtgattccttcccaactactacaaggattattaccaatccatgaagagagtagtgtcttgc |
14465874 |
T |
 |
| Q |
202 |
tatggttgtcaa |
213 |
Q |
| |
|
| |||||||||| |
|
|
| T |
14465873 |
tttggttgtcaa |
14465862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 14480980 - 14480826
Alignment:
| Q |
5 |
aactccgtacaagaagttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatattggtg |
104 |
Q |
| |
|
|||||| || |||||||||||| | |||||||| | |||||||||||||||||||||||||||||||| ||||| |||||||||||| ||| | ||||| |
|
|
| T |
14480980 |
aactccatagaagaagttgtttctcaaaactaatttttggatttttggaagtgatgagaaattgagactttgaagtgtaccttttagttcaaaactggtg |
14480881 |
T |
 |
| Q |
105 |
agatttaccttgttgatggactttgattcataatcacacgtgattccttcccaac |
159 |
Q |
| |
|
|||| || |||||| || || ||||| | || |||||| ||||||||||||||| |
|
|
| T |
14480880 |
agatctatcttgttaatagattttgagttattatcacatatgattccttcccaac |
14480826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 14524609 - 14524821
Alignment:
| Q |
1 |
gaacaactccgtacaagaagttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatatt |
100 |
Q |
| |
|
|||||||||| || || |||||||| |||||||||| | |||||||||||||||||||||| ||||||| | ||||| |||||||||||||||||| | |
|
|
| T |
14524609 |
gaacaactccatagaatgagttgtttcttaaaactaagctatggatttttggaagtgatgagatattgagattttgaagtgtaccttttagtccaatact |
14524708 |
T |
 |
| Q |
101 |
ggtgagatttaccttgttgatggactttgattcataatcacacgtgattccttcccaaccacaaggattattaccaatccatgaagagagaaatgccctg |
200 |
Q |
| |
|
| |||| || ||||| ||| || ||||| | |||||| |||||||| ||||| ||||| ||||||||||||||||||||||| || | | || |
|
|
| T |
14524709 |
tgcaagatgtatcttgtagatagattttgacttgccatcacatgtgattcccacccaattgcaaggcttattaccaatccatgaagagagcaaagacttg |
14524808 |
T |
 |
| Q |
201 |
ctatggttgtcaa |
213 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
14524809 |
ctttggttgtcaa |
14524821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 190
Target Start/End: Complemental strand, 14480809 - 14480780
Alignment:
| Q |
161 |
acaaggattattaccaatccatgaagagag |
190 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
14480809 |
acaaggattattaccaatccatgaagagag |
14480780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0400
Description:
Target: scaffold0400; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 5482 - 5267
Alignment:
| Q |
1 |
gaacaactccgtacaagaagttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatatt |
100 |
Q |
| |
|
||||||||||||| ||| | |||||| |||||||||| || ||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| |
|
|
| T |
5482 |
gaacaactccgtaaaaggaattgttttttaaaactaagatgcggatttttggaagtgatgagaaattgagactttgaagcataccttttaggccaatatt |
5383 |
T |
 |
| Q |
101 |
ggtgagatttaccttgttgatggactttgattcataatcacacgtgattccttccca---accacaaggattattaccaatccatgaagagagaaatgcc |
197 |
Q |
| |
|
||||||||||| |||| ||| || ||||| |||| | ||| |||||||||||||| || |||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
5382 |
ggtgagatttaacttgcagatagattttgagtcatcacaacatgtgattccttcccaactactacaaggatcgttaccgatccatgaagagagcaatgcc |
5283 |
T |
 |
| Q |
198 |
ctgctatggttgtcaa |
213 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
5282 |
ctactatggttgtcaa |
5267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 10960 - 10766
Alignment:
| Q |
19 |
agttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatattggtgagatttaccttgtt |
118 |
Q |
| |
|
|||||||| |||||||||| | |||||||||||||||||||||| ||||||| | ||||| |||||||||||||||||| | | |||| || ||||| |
|
|
| T |
10960 |
agttgtttcttaaaactaagctatggatttttggaagtgatgagatattgagattttgaagtgtaccttttagtccaatacttgcaagatgtatcttgta |
10861 |
T |
 |
| Q |
119 |
gatggactttgattcataatcacacgtgattccttcccaaccacaaggattattaccaatccatgaagagagaaatgccctgctatggttgtcaa |
213 |
Q |
| |
|
||| || ||||| | |||||| |||||||| ||||| ||||| ||||||||||||||||||||||| |||| | |||| |||||||||| |
|
|
| T |
10860 |
gatagattttgacttgccatcacatgtgattcccacccaattgcaaggcttattaccaatccatgaagagagcaatgacttgctttggttgtcaa |
10766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0365
Description:
Target: scaffold0365; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 6126 - 5911
Alignment:
| Q |
1 |
gaacaactccgtacaagaagttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatatt |
100 |
Q |
| |
|
||||||||||||| ||| | |||||| |||||||||| || ||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| |
|
|
| T |
6126 |
gaacaactccgtaaaaggaattgttttttaaaactaagatgcggatttttggaagtgatgagaaattgagactttgaagcataccttttaggccaatatt |
6027 |
T |
 |
| Q |
101 |
ggtgagatttaccttgttgatggactttgattcataatcacacgtgattccttccca---accacaaggattattaccaatccatgaagagagaaatgcc |
197 |
Q |
| |
|
||||||||||| |||| ||| || ||||| |||| | ||| |||||||||||||| || |||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
6026 |
ggtgagatttaacttgcagatagattttgagtcatcacaacatgtgattccttcccaactactacaaggatcgttaccgatccatgaagagagcaatgcc |
5927 |
T |
 |
| Q |
198 |
ctgctatggttgtcaa |
213 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
5926 |
ctactatggttgtcaa |
5911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 11603 - 11409
Alignment:
| Q |
19 |
agttgtttgttaaaactaaagtgtggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatattggtgagatttaccttgtt |
118 |
Q |
| |
|
|||||||| |||||||||| | |||||||||||||||||||||| ||||||| | ||||| |||||||||||||||||| | | |||| || ||||| |
|
|
| T |
11603 |
agttgtttcttaaaactaagctatggatttttggaagtgatgagatattgagattttgaagtgtaccttttagtccaatacttgcaagatgtatcttgta |
11504 |
T |
 |
| Q |
119 |
gatggactttgattcataatcacacgtgattccttcccaaccacaaggattattaccaatccatgaagagagaaatgccctgctatggttgtcaa |
213 |
Q |
| |
|
||| || ||||| | |||||| |||||||| ||||| ||||| ||||||||||||||||||||||| |||| | |||| |||||||||| |
|
|
| T |
11503 |
gatagattttgacttgccatcacatgtgattcccacccaattgcaaggcttattaccaatccatgaagagagcaatgacttgctttggttgtcaa |
11409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 16023155 - 16023082
Alignment:
| Q |
42 |
tggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatattggtgagatttacctt |
115 |
Q |
| |
|
||||| ||||||||||||||||| || ||||| | |||||||||||| | ||| ||||| |||||||||||||| |
|
|
| T |
16023155 |
tggatatttggaagtgatgagaagttaagactttcaagcgtacctttcaatcccatatttgtgagatttacctt |
16023082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 16101247 - 16101174
Alignment:
| Q |
42 |
tggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatattggtgagatttacctt |
115 |
Q |
| |
|
||||| ||||||||||||||||| || ||||| | |||||||||||| | ||| ||||| |||||||||||||| |
|
|
| T |
16101247 |
tggatatttggaagtgatgagaagttaagactttcaagcgtacctttcaatcccatatttgtgagatttacctt |
16101174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 16170925 - 16170852
Alignment:
| Q |
42 |
tggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatattggtgagatttacctt |
115 |
Q |
| |
|
||||| ||||||||||||||||| || ||||| | |||||||||||| | ||| ||||| |||||||||||||| |
|
|
| T |
16170925 |
tggatatttggaagtgatgagaagttaagactttcaagcgtacctttcaatcccatatttgtgagatttacctt |
16170852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 14603684 - 14603611
Alignment:
| Q |
42 |
tggatttttggaagtgatgagaaattgagactctgaagcgtaccttttagtccaatattggtgagatttacctt |
115 |
Q |
| |
|
||||| ||||||||||||||||| || ||||| | ||||||||||| | ||| ||||| || ||||||||||| |
|
|
| T |
14603684 |
tggatatttggaagtgatgagaagttaagactttcgagcgtacctttcaatcccatatttgtcagatttacctt |
14603611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University