View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18715_low_15 (Length: 261)

Name: NF18715_low_15
Description: NF18715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18715_low_15
NF18715_low_15
[»] chr1 (51 HSPs)
chr1 (79-191)||(46320480-46320592)
chr1 (78-233)||(32161283-32161432)
chr1 (79-194)||(20114539-20114654)
chr1 (79-194)||(253301-253416)
chr1 (79-194)||(26944413-26944528)
chr1 (79-194)||(32160666-32160781)
chr1 (79-194)||(33206027-33206142)
chr1 (78-178)||(46319683-46319783)
chr1 (79-170)||(253028-253119)
chr1 (73-194)||(15354582-15354703)
chr1 (79-182)||(51271624-51271730)
chr1 (78-189)||(44596794-44596908)
chr1 (79-159)||(471122-471202)
chr1 (79-186)||(15354118-15354223)
chr1 (79-168)||(4031540-4031629)
chr1 (79-164)||(29765583-29765668)
chr1 (79-164)||(46886441-46886526)
chr1 (79-136)||(50117895-50117952)
chr1 (79-139)||(44598985-44599045)
chr1 (79-186)||(94344-94453)
chr1 (79-186)||(29438049-29438159)
chr1 (13-58)||(48455444-48455489)
chr1 (74-189)||(2425711-2425828)
chr1 (15-58)||(12627188-12627231)
chr1 (147-194)||(52427517-52427564)
chr1 (8-58)||(4208345-4208395)
chr1 (79-189)||(23913791-23913904)
chr1 (79-137)||(27487717-27487775)
chr1 (75-185)||(49874938-49875047)
chr1 (79-184)||(6562192-6562300)
chr1 (79-140)||(9711729-9711790)
chr1 (137-182)||(21263361-21263406)
chr1 (200-233)||(33205554-33205587)
chr1 (79-160)||(49924790-49924871)
chr1 (201-233)||(15354267-15354299)
chr1 (78-122)||(16281691-16281735)
chr1 (79-159)||(44465530-44465610)
chr1 (76-152)||(51268898-51268973)
chr1 (15-58)||(5329072-5329115)
chr1 (141-184)||(15660260-15660303)
chr1 (143-186)||(26770582-26770625)
chr1 (79-137)||(21144685-21144743)
chr1 (76-118)||(31783816-31783858)
chr1 (78-184)||(51288820-51288929)
chr1 (5-58)||(21140974-21141027)
chr1 (200-233)||(26944572-26944605)
chr1 (135-184)||(33205474-33205523)
chr1 (79-140)||(37014884-37014945)
chr1 (79-123)||(31779963-31780007)
chr1 (79-123)||(44336187-44336231)
chr1 (79-159)||(52805592-52805672)
[»] chr8 (53 HSPs)
chr8 (79-194)||(7577612-7577727)
chr8 (77-194)||(27704554-27704671)
chr8 (79-194)||(7577050-7577165)
chr8 (79-194)||(27703995-27704110)
chr8 (77-152)||(44052292-44052367)
chr8 (78-164)||(41250126-41250211)
chr8 (82-193)||(37577268-37577379)
chr8 (79-184)||(34366846-34366953)
chr8 (78-140)||(43262358-43262420)
chr8 (79-139)||(39604398-39604458)
chr8 (78-137)||(39939296-39939355)
chr8 (78-159)||(34234516-34234597)
chr8 (79-184)||(39601638-39601746)
chr8 (5-58)||(40740855-40740908)
chr8 (79-159)||(20546787-20546867)
chr8 (78-184)||(1114676-1114785)
chr8 (8-58)||(7120849-7120899)
chr8 (77-123)||(28694513-28694559)
chr8 (77-135)||(44050747-44050805)
chr8 (200-233)||(7577195-7577228)
chr8 (200-233)||(7577538-7577571)
chr8 (200-233)||(27704137-27704170)
chr8 (200-233)||(27704480-27704513)
chr8 (5-58)||(41472085-41472138)
chr8 (79-184)||(41743824-41743932)
chr8 (14-59)||(42731779-42731824)
chr8 (82-137)||(204752-204805)
chr8 (82-137)||(319589-319642)
chr8 (82-186)||(20549261-20549368)
chr8 (15-55)||(31745134-31745174)
chr8 (83-194)||(37577754-37577855)
chr8 (78-121)||(10749770-10749813)
chr8 (15-58)||(16939329-16939372)
chr8 (14-53)||(20861946-20861985)
chr8 (79-154)||(41276924-41276999)
chr8 (77-159)||(18441500-18441582)
chr8 (80-186)||(31957769-31957878)
chr8 (77-159)||(35966808-35966890)
chr8 (5-59)||(36345976-36346030)
chr8 (16-58)||(39277543-39277585)
chr8 (75-182)||(39753031-39753140)
chr8 (200-233)||(203924-203957)
chr8 (200-233)||(204168-204201)
chr8 (200-233)||(318761-318794)
chr8 (200-233)||(319005-319038)
chr8 (79-136)||(545869-545926)
chr8 (79-140)||(3641580-3641641)
chr8 (79-124)||(26451420-26451465)
chr8 (143-184)||(32585024-32585065)
chr8 (200-233)||(37577408-37577441)
chr8 (75-159)||(35389438-35389522)
chr8 (79-123)||(45409806-45409850)
chr8 (76-184)||(45454337-45454448)
[»] chr6 (26 HSPs)
chr6 (79-233)||(11687393-11687545)
chr6 (79-194)||(11687916-11688031)
chr6 (77-164)||(11840304-11840391)
chr6 (79-189)||(29076349-29076462)
chr6 (79-189)||(29109882-29109995)
chr6 (79-189)||(29111322-29111435)
chr6 (79-164)||(14012429-14012513)
chr6 (77-140)||(28362812-28362875)
chr6 (79-189)||(29065674-29065787)
chr6 (79-189)||(29074687-29074800)
chr6 (79-189)||(29079451-29079564)
chr6 (79-189)||(29107260-29107373)
chr6 (75-139)||(117913-117977)
chr6 (79-159)||(29061230-29061310)
chr6 (75-159)||(29286159-29286243)
chr6 (102-184)||(18610237-18610321)
chr6 (94-137)||(3502718-3502761)
chr6 (17-59)||(15888882-15888924)
chr6 (79-184)||(13164291-13164395)
chr6 (79-184)||(18605979-18606086)
chr6 (79-159)||(31768687-31768767)
chr6 (27-59)||(35096619-35096651)
chr6 (77-184)||(2050961-2051070)
chr6 (8-42)||(34634134-34634168)
chr6 (80-136)||(29068341-29068397)
chr6 (80-136)||(29083588-29083644)
[»] chr2 (37 HSPs)
chr2 (77-193)||(17688218-17688334)
chr2 (76-184)||(39378348-39378456)
chr2 (79-186)||(17688790-17688897)
chr2 (77-194)||(28138309-28138426)
chr2 (79-194)||(28137791-28137906)
chr2 (79-167)||(39377635-39377723)
chr2 (78-184)||(7189982-7190090)
chr2 (79-164)||(43870175-43870260)
chr2 (79-184)||(3943223-3943330)
chr2 (73-184)||(23346709-23346822)
chr2 (79-186)||(23347357-23347466)
chr2 (135-194)||(43978142-43978201)
chr2 (102-164)||(10825175-10825237)
chr2 (77-159)||(35493400-35493482)
chr2 (78-159)||(1149405-1149486)
chr2 (5-58)||(16544320-16544373)
chr2 (79-184)||(25184861-25184968)
chr2 (80-124)||(29093927-29093971)
chr2 (135-186)||(43977583-43977635)
chr2 (5-58)||(28139628-28139681)
chr2 (23-68)||(29406911-29406956)
chr2 (139-191)||(16340571-16340623)
chr2 (76-152)||(32956419-32956495)
chr2 (75-126)||(3085967-3086018)
chr2 (76-159)||(24749617-24749700)
chr2 (77-184)||(27276405-27276515)
chr2 (75-138)||(29090539-29090602)
chr2 (135-185)||(432085-432135)
chr2 (83-184)||(1096533-1096637)
chr2 (200-233)||(28138242-28138275)
chr2 (79-140)||(34639392-34639453)
chr2 (147-184)||(39033552-39033589)
chr2 (80-136)||(3940873-3940929)
chr2 (143-186)||(6637532-6637578)
chr2 (78-126)||(29074094-29074142)
chr2 (79-159)||(41181371-41181451)
chr2 (79-123)||(41273342-41273386)
[»] chr5 (30 HSPs)
chr5 (78-193)||(2532526-2532641)
chr5 (79-184)||(35777049-35777154)
chr5 (79-186)||(2532020-2532127)
chr5 (79-184)||(13568106-13568214)
chr5 (79-164)||(7762298-7762382)
chr5 (79-163)||(9784205-9784289)
chr5 (79-184)||(7757259-7757367)
chr5 (8-58)||(35564210-35564260)
chr5 (79-184)||(43094607-43094715)
chr5 (80-184)||(34123966-34124073)
chr5 (135-194)||(18848036-18848095)
chr5 (77-136)||(38407131-38407190)
chr5 (78-124)||(11699258-11699304)
chr5 (82-184)||(34122461-34122566)
chr5 (82-154)||(1397414-1397486)
chr5 (79-184)||(25897110-25897218)
chr5 (141-194)||(29413300-29413353)
chr5 (200-233)||(35776766-35776799)
chr5 (79-184)||(43093942-43094050)
chr5 (79-135)||(25877556-25877612)
chr5 (77-125)||(39743241-39743289)
chr5 (82-137)||(30887441-30887496)
chr5 (78-160)||(3600269-3600351)
chr5 (16-58)||(35651364-35651406)
chr5 (78-184)||(41798751-41798860)
chr5 (77-122)||(30705069-30705114)
chr5 (79-140)||(41799845-41799906)
chr5 (102-138)||(11345965-11346001)
chr5 (79-159)||(27867879-27867959)
chr5 (79-123)||(28388614-28388658)
[»] chr3 (44 HSPs)
chr3 (79-233)||(5136520-5136673)
chr3 (79-194)||(33304984-33305097)
chr3 (79-194)||(44687475-44687588)
chr3 (78-194)||(1388121-1388244)
chr3 (79-184)||(5138301-5138406)
chr3 (79-233)||(13742683-13742833)
chr3 (79-184)||(43476125-43476234)
chr3 (77-184)||(43478861-43478971)
chr3 (82-184)||(55385074-55385179)
chr3 (79-163)||(13743160-13743244)
chr3 (79-154)||(48250933-48251008)
chr3 (79-184)||(16647178-16647286)
chr3 (79-139)||(16484535-16484595)
chr3 (135-194)||(3350037-3350096)
chr3 (79-140)||(50216932-50216993)
chr3 (78-184)||(46989480-46989589)
chr3 (79-139)||(47070402-47070462)
chr3 (79-154)||(46993235-46993310)
chr3 (78-184)||(41137651-41137760)
chr3 (79-164)||(600598-600683)
chr3 (15-59)||(2062334-2062378)
chr3 (79-159)||(51696574-51696654)
chr3 (152-186)||(44685870-44685904)
chr3 (199-233)||(44685942-44685976)
chr3 (200-233)||(33304234-33304267)
chr3 (78-123)||(42166504-42166549)
chr3 (135-186)||(3349481-3349533)
chr3 (15-59)||(14043979-14044023)
chr3 (138-194)||(54203494-54203550)
chr3 (23-58)||(7941059-7941094)
chr3 (15-58)||(20485617-20485660)
chr3 (79-126)||(47074202-47074249)
chr3 (74-184)||(23443137-23443250)
chr3 (8-58)||(30294928-30294978)
chr3 (79-125)||(36817614-36817660)
chr3 (8-58)||(45076324-45076374)
chr3 (79-125)||(49217045-49217091)
chr3 (79-184)||(4002536-4002643)
chr3 (79-186)||(36812770-36812881)
chr3 (5-58)||(44523372-44523425)
chr3 (79-123)||(4331914-4331958)
chr3 (79-123)||(8475761-8475805)
chr3 (79-123)||(14403065-14403109)
chr3 (79-123)||(52387719-52387763)
[»] chr7 (35 HSPs)
chr7 (79-184)||(40323665-40323770)
chr7 (77-191)||(36185583-36185697)
chr7 (79-184)||(46738736-46738844)
chr7 (79-161)||(40323202-40323284)
chr7 (79-176)||(36185124-36185220)
chr7 (79-151)||(48194640-48194712)
chr7 (77-140)||(47741712-47741775)
chr7 (87-184)||(34139839-34139939)
chr7 (135-194)||(4997851-4997910)
chr7 (77-140)||(48829895-48829958)
chr7 (135-193)||(35200785-35200844)
chr7 (9-58)||(30845900-30845949)
chr7 (79-136)||(46740575-46740632)
chr7 (8-58)||(28115547-28115597)
chr7 (79-125)||(29593421-29593467)
chr7 (149-186)||(19804629-19804666)
chr7 (79-140)||(40587608-40587669)
chr7 (14-58)||(13644370-13644414)
chr7 (75-159)||(40590550-40590634)
chr7 (79-139)||(43686927-43686987)
chr7 (147-186)||(31873853-31873892)
chr7 (137-186)||(4997347-4997397)
chr7 (139-185)||(31873395-31873441)
chr7 (199-233)||(36185228-36185262)
chr7 (79-136)||(5537800-5537857)
chr7 (9-58)||(11886959-11887008)
chr7 (79-124)||(17834422-17834467)
chr7 (79-140)||(28980251-28980312)
chr7 (14-47)||(29097937-29097970)
chr7 (82-184)||(36186504-36186608)
chr7 (200-229)||(40323292-40323321)
chr7 (79-140)||(41623893-41623954)
chr7 (78-126)||(13921355-13921403)
chr7 (16-48)||(31512292-31512324)
chr7 (8-56)||(38555487-38555535)
[»] chr4 (31 HSPs)
chr4 (78-184)||(44674098-44674206)
chr4 (78-137)||(51492005-51492064)
chr4 (78-159)||(37015864-37015945)
chr4 (79-164)||(39590622-39590707)
chr4 (78-164)||(16983455-16983541)
chr4 (79-184)||(16984192-16984300)
chr4 (79-159)||(39588026-39588106)
chr4 (78-136)||(37022131-37022189)
chr4 (15-58)||(48806434-48806477)
chr4 (77-136)||(50278880-50278939)
chr4 (79-184)||(50274694-50274802)
chr4 (78-159)||(56138180-56138261)
chr4 (79-184)||(9889928-9890036)
chr4 (5-58)||(43176699-43176752)
chr4 (79-139)||(6280791-6280851)
chr4 (79-123)||(37880661-37880705)
chr4 (80-123)||(16473774-16473817)
chr4 (16-58)||(8111497-8111539)
chr4 (16-58)||(18411147-18411189)
chr4 (79-125)||(19073732-19073778)
chr4 (102-164)||(28081416-28081477)
chr4 (78-123)||(28235655-28235700)
chr4 (79-124)||(28320493-28320538)
chr4 (78-123)||(37880597-37880642)
chr4 (79-124)||(49889617-49889662)
chr4 (79-139)||(1041869-1041929)
chr4 (79-135)||(4980000-4980056)
chr4 (14-58)||(37856824-37856868)
chr4 (82-154)||(37959784-37959856)
chr4 (88-164)||(56140686-56140762)
chr4 (79-139)||(56304811-56304871)
[»] scaffold0153 (2 HSPs)
scaffold0153 (135-193)||(16883-16941)
scaffold0153 (200-233)||(16977-17010)
[»] scaffold0176 (1 HSPs)
scaffold0176 (87-184)||(764-864)
[»] scaffold0184 (2 HSPs)
scaffold0184 (79-164)||(18347-18432)
scaffold0184 (78-140)||(17964-18026)
[»] scaffold0078 (2 HSPs)
scaffold0078 (79-164)||(54412-54497)
scaffold0078 (78-140)||(54818-54880)
[»] scaffold0206 (1 HSPs)
scaffold0206 (79-126)||(13299-13346)
[»] scaffold0341 (1 HSPs)
scaffold0341 (79-184)||(17382-17490)
[»] scaffold0217 (1 HSPs)
scaffold0217 (27-59)||(8750-8782)
[»] scaffold0361 (1 HSPs)
scaffold0361 (79-125)||(4493-4539)
[»] scaffold0340 (1 HSPs)
scaffold0340 (77-123)||(19161-19207)
[»] scaffold0116 (2 HSPs)
scaffold0116 (79-184)||(11235-11343)
scaffold0116 (78-123)||(16050-16095)
[»] scaffold0169 (1 HSPs)
scaffold0169 (76-140)||(1723-1787)
[»] scaffold0011 (1 HSPs)
scaffold0011 (79-123)||(235867-235911)


Alignment Details
Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 79 - 191
Target Start/End: Complemental strand, 46320592 - 46320480
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46320592 gagaattgctgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 46320493  T
Q  179 ttaactactgaag 191  Q
    |||||||| ||||    
T  46320492 ttaactaccgaag 46320480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 78 - 233
Target Start/End: Complemental strand, 32161432 - 32161283
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgca 177  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  32161432 agagaattgttgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgcccctgcggcagttaactaccgaagtttggaaccggctgca 32161333  T
Q  178 gttaactactgaagttcgacggaaaaaaaaacctcggcactttactgccgaggaac 233  Q
    ||||||||| ||    |||   |||||||||||||| |||||||||||||||||||    
T  32161332 gttaactaccga----cga--aaaaaaaaaacctcgtcactttactgccgaggaac 32161283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 20114539 - 20114654
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  20114539 gagaattgttgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttgggaaccggctgcag 20114638  T
Q  179 ttaactactgaagttc 194  Q
    |||||||| |||||||    
T  20114639 ttaactaccgaagttc 20114654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 253416 - 253301
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  253416 gagaattgttgttcccacattacgtaaggctgtgccacacgagtaaatgacatttttgcccctgcggtagttaactaccgaagtttggaaccggctgcag 253317  T
Q  179 ttaactactgaagttc 194  Q
    |||||||| |||||||    
T  253316 ttaactaccgaagttc 253301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 26944413 - 26944528
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||||||||||    
T  26944413 gagaattgttgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgcccctacggcagttaactatcgaagtttggaaccggctgcag 26944512  T
Q  179 ttaactactgaagttc 194  Q
    |||||| | |||||||    
T  26944513 ttaactcccgaagttc 26944528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 32160666 - 32160781
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| || ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  32160666 gagaattgctgatcccacattacataaggctgtgccacacgagtaaatgtcgtttttacccctgcggcagttaactaccgaagtttggaaccggctgcag 32160765  T
Q  179 ttaactactgaagttc 194  Q
    |||||| | |||||||    
T  32160766 ttaacttccgaagttc 32160781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 33206142 - 33206027
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| |||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||||| |||||| |||||||||||| ||||||||||||    
T  33206142 gagaattgctgttcccacattacataagactgtgccacacgagtaaatgacatttttacccctgcggcagttaattaccgaagtttggaaccggctgcag 33206043  T
Q  179 ttaactactgaagttc 194  Q
    |||||||| |||||||    
T  33206042 ttaactaccgaagttc 33206027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 78 - 178
Target Start/End: Original strand, 46319683 - 46319783
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgca 177  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||    
T  46319683 agagaattgttgttcccacattacatatggctgtgccacacgagtaaatgacgtttttgttcctgcggtagttaactaccgaagtttagaaccggctgca 46319782  T
Q  178 g 178  Q
    |    
T  46319783 g 46319783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 253028 - 253119
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaacc 170  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  253028 gagaattgctgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgcccctgcggtagttatctaccgaagtttggaacc 253119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 15354703 - 15354582
Alignment:
Q  73 tcaaaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccgg 172  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| | |||||| ||  |||||||  ||||||    
T  15354703 tcaaatgagaattgctgttcccacattacataaggttgtgtcacacgagtaaatgacgtttttatccctgcagcagttaaatattgaagtttagaaccgg 15354604  T
Q  173 ctgcagttaactactgaagttc 194  Q
    |||| ||||||||| |||||||    
T  15354603 ctgcggttaactaccgaagttc 15354582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 79 - 182
Target Start/End: Complemental strand, 51271730 - 51271624
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||  ||| |||||||| |||||||||  |||| |||||||    
T  51271730 gagaattgttgttcccaaattacataaggttgtgccacacgggtaaatgacgtttttgccccctcggcagttaactgccgaagttttagaaatccggctg 51271631  T
Q  176 cagttaa 182  Q
    |||||||    
T  51271630 cagttaa 51271624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 44596794 - 44596908
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggct 174  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||   ||| |||||||| |||||||||  |||| |||| |    
T  44596794 agagaattgttgttcccacattacataagactgtgccacacgagtaaatgacgtttttgcccgctcggcagttaactgccgaagttttagaaatccggtt 44596893  T
Q  175 gcagttaactactga 189  Q
    |||||||||| ||||    
T  44596894 gcagttaactgctga 44596908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 471202 - 471122
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||  ||| |||||||| ||||    
T  471202 gagaattgttgttcccacattacataaggttgtgccacgcgggtaaatgacgtttttgccccatcggcagttaactgccga 471122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 15354118 - 15354223
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| | ||||||||||||||||||||||  |||||||||||||||| ||||| | ||| || |||||||||| ||||||||| |||||||| |||    
T  15354118 gagaattgctattcccacattacataaggttgt--cacacgagtaaatgacatttttactcctacgatagttaactatcgaagtttggaaccggctacag 15354215  T
Q  179 ttaactac 186  Q
    ||||||||    
T  15354216 ttaactac 15354223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 4031629 - 4031540
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaa 168  Q
    ||||||||||||||||| ||||||||||||| |||||||| |||||||||  |||||| |||||| | ||||||||| ||||||||||||    
T  4031629 gagaattgttgttcccatattacataaggttatgccacacaagtaaatgatatttttgtccctgcagcagttaactatcgaagtttgaaa 4031540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 29765668 - 29765583
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||  ||| |||||||| |||||||||    
T  29765668 gagaattgttgttcccacattgcataaggttgtaccacacgaataaatgacgtttttgtcccctcggcagttaactgccgaagttt 29765583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 46886526 - 46886441
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    |||||||||||||  ||||||  |||||||||||| ||||||||||||||||||||||||||  ||| |||||||| |||||||||    
T  46886526 gagaattgttgtttacacatttgataaggttgtgctacacgagtaaatgacgtttttgccccctcggcagttaactgccgaagttt 46886441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 50117952 - 50117895
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttg 136  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50117952 gagaattgctgttcccacattacataaggttgtgccacacgagtaaatgacatttttg 50117895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 44599045 - 44598985
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccc 139  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  44599045 gagaattgttgtacccacattacatagggttgtgccacacgagtaaatgacatttttgccc 44598985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 94344 - 94453
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    |||||||||||||  ||||||  |||||| ||||||||| |||||||||||||||||| |||| ||| |||||||| |||||||||  |||| || ||||    
T  94344 gagaattgttgtttacacatttgataaggctgtgccacatgagtaaatgacgtttttg-cccttcggcagttaactgccgaagttttagaaatccagctg 94442  T
Q  176 cagttaactac 186  Q
    |||||||||||    
T  94443 cagttaactac 94453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 29438159 - 29438049
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt---gaaaccggctg 175  Q
    |||||||||||||||||||||  ||||||||||| ||||||| ||| | |||||||||||||  ||| |||||||| | ||| | |    ||||||||||    
T  29438159 gagaattgttgttcccacatttgataaggttgtggcacacgaataatttacgtttttgccccctcggcagttaactgcagaaatattaaaaaaccggctg 29438060  T
Q  176 cagttaactac 186  Q
    |||||||||||    
T  29438059 cagttaactac 29438049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 48455489 - 48455444
Alignment:
Q  13 aatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||    
T  48455489 aatatttgggtaaattactcgtgtttctcaaccaaatcaaatgtgt 48455444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 2425828 - 2425711
Alignment:
Q  74 caaaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-cc 170  Q
    |||| ||||||||||||||||||||| |  ||||  ||| ||||||||||||| ||  |||| ||||| ||| |||||||| |||||||||  |||| ||    
T  2425828 caaatgagaattgttgttcccacattgcggaaggccgtgacacacgagtaaataacccttttacccct-cggcagttaactgccgaagttttggaaatcc 2425730  T
Q  171 ggctgcagttaactactga 189  Q
    |||||||||||||| ||||    
T  2425729 ggctgcagttaactgctga 2425711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 12627231 - 12627188
Alignment:
Q  15 tatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||||| |||||||||||||||||||| |||||||||||||||    
T  12627231 tatttgggtaaattactcgtgtttctcagccaaaccaaatgtgt 12627188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 52427564 - 52427517
Alignment:
Q  147 agttaactaccgaagtttgaaaccggctgcagttaactactgaagttc 194  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||    
T  52427564 agttaactaccgaagtttggaaccggctgcagttaactatcgaagttc 52427517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 4208395 - 4208345
Alignment:
Q  8 cgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||| |||||||  ||||||||||||||||||||| ||||||||||||||    
T  4208395 cgaaggatatttgagtaaattactcgtgtttctcaatcaaaccaaatgtgt 4208345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 23913791 - 23913904
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaa-accggctg 175  Q
    ||||||||||||||||||||   ||||||||||||||||| ||||||  ||| |||| ||||  | | |||||||||||||  | ||||||  |||||||    
T  23913791 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcagcagttaactaccgaggaatttgaattccggctg 23913890  T
Q  176 cagttaactactga 189  Q
    ||||||||| ||||    
T  23913891 cagttaactgctga 23913904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 27487775 - 27487717
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgc 137  Q
    |||||||| ||||||||||||  ||||||||||| ||||||||||| | ||||||||||    
T  27487775 gagaattgatgttcccacatttgataaggttgtggcacacgagtaatttacgtttttgc 27487717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 49874938 - 49875047
Alignment:
Q  75 aaaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggct 174  Q
    |||||||||||||||||  |||||| |||||||||||| ||||||||||| | ||    ||| |||| ||  |||||||| ||||| | || ||||||||    
T  49874938 aaaagagaattgttgttgacacattgcataaggttgtgtcacacgagtaatttactaaattgtccct-cgacagttaactgccgaattatggaaccggct 49875036  T
Q  175 gcagttaacta 185  Q
    |||||||||||    
T  49875037 gcagttaacta 49875047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 6562300 - 6562192
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctg 175  Q
    |||||||| |||||||||||   ||||||||||||||||| ||||||  ||| |||| ||||  ||| |||||||| ||||  | ||||||| |||||||    
T  6562300 gagaattgctgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctg 6562201  T
Q  176 cagttaact 184  Q
    |||||||||    
T  6562200 cagttaact 6562192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 9711790 - 9711729
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    |||||||||||||||||||||  ||||||||||| ||||| ||||||  ||| |||||||||    
T  9711790 gagaattgttgttcccacatttgataaggttgtggcacactagtaaaatacgattttgcccc 9711729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 21263361 - 21263406
Alignment:
Q  137 cccctgcggtagttaactaccgaagtttgaaaccggctgcagttaa 182  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  21263361 cccctgcggcagttaactaccgaagtttggaaccgactgcagttaa 21263406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 33205554 - 33205587
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    ||||||||||||||||||||||||||||||||||    
T  33205554 aaaaaaaaacctcggcactttactgccgaggaac 33205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 49924790 - 49924871
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaa 160  Q
    |||||||||||||  |||||| ||||||| || | ||||||||||| | |||||||||||||| ||| | |||||| |||||    
T  49924790 gagaattgttgttgacacattgcataaggctgaggcacacgagtaatttacgtttttgccccttcggcaattaactgccgaa 49924871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 15354267 - 15354299
Alignment:
Q  201 aaaaaaaacctcggcactttactgccgaggaac 233  Q
    |||||||||||||||||||||||||||||||||    
T  15354267 aaaaaaaacctcggcactttactgccgaggaac 15354299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 16281691 - 16281735
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagt 122  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||    
T  16281691 agagaattgatgttcccacattacataaggttgtggcacatgagt 16281735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 44465530 - 44465610
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    ||||||||||||||||||||   |||||||||||||| || ||||||  ||| |||| ||||  ||| |||||||||||||    
T  44465530 gagaattgttgttcccacatgtgataaggttgtgccatactagtaaaatacgattttaccccctcggcagttaactaccga 44465610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 51268898 - 51268973
Alignment:
Q  76 aaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaa 152  Q
    ||||||||||||||||  |||||| ||||||  |||| |||||  |||||||||||||||| |||| ||||||||||    
T  51268898 aaagagaattgttgttggcacattgcataagaatgtgtcacacatgtaaatgacgtttttgtccct-cggtagttaa 51268973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 5329115 - 5329072
Alignment:
Q  15 tatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||||| ||||||| |||||||||||| |||||||||||||||    
T  5329115 tatttgggtaaattattcgtgtttctcagccaaaccaaatgtgt 5329072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 15660303 - 15660260
Alignment:
Q  141 tgcggtagttaactaccgaagtttgaaaccggctgcagttaact 184  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||    
T  15660303 tgcggcagttaactaccgatgtttggaaccggctgcagttaact 15660260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 26770625 - 26770582
Alignment:
Q  143 cggtagttaactaccgaagtttgaaaccggctgcagttaactac 186  Q
    |||||||||||| ||||| | |||||||||||||||||||||||    
T  26770625 cggtagttaactgccgaattatgaaaccggctgcagttaactac 26770582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 21144743 - 21144685
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgc 137  Q
    |||||||||||||||||||||  |||||||| || ||||||| ||| | ||||||||||    
T  21144743 gagaattgttgttcccacatttgataaggttctggcacacgactaatttacgtttttgc 21144685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 31783858 - 31783816
Alignment:
Q  76 aaagagaattgttgttcccacattacataaggttgtgccacac 118  Q
    ||||||||||||||||  ||||||||||||||||||| |||||    
T  31783858 aaagagaattgttgtttacacattacataaggttgtgtcacac 31783816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 51288820 - 51288929
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggct 174  Q
    ||||||||| | ||||||||||  |||||| |||| ||||||| ||| | | |||||||||||  ||| |||||||||||||  | || |||| ||||||    
T  51288820 agagaattgctattcccacatttgataaggctgtggcacacgaataatttatgtttttgccccctcggcagttaactaccgaggaattagaaatccggct 51288919  T
Q  175 gcagttaact 184  Q
    ||||||||||    
T  51288920 gcagttaact 51288929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 21141027 - 21140974
Alignment:
Q  5 tgtcgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    |||||||| | |||| | |||||||||||||| ||||| |||||||||||||||    
T  21141027 tgtcgaaggacatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgt 21140974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 26944572 - 26944605
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    ||||||||| ||||||||||||||||||||||||    
T  26944572 aaaaaaaaatctcggcactttactgccgaggaac 26944605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 33205474 - 33205523
Alignment:
Q  135 tgcccctgcggtagttaactaccgaagtttgaaaccggctgcagttaact 184  Q
    |||| |||||| ||||| ||||||||||||| ||||||||| ||||||||    
T  33205474 tgcctctgcggcagttacctaccgaagtttggaaccggctgtagttaact 33205523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 37014884 - 37014945
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    |||||||||||||||||||||  |||| |||||| ||||| ||||||  ||| |||||||||    
T  37014884 gagaattgttgttcccacatttgataatgttgtggcacactagtaaaatacgattttgcccc 37014945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 31779963 - 31780007
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    |||||||||||||  |||||||||||||| ||||||||| |||||    
T  31779963 gagaattgttgtttacacattacataaggctgtgccacatgagta 31780007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 44336187 - 44336231
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    |||||||||||||||||||||  |||||||| || ||||||||||    
T  44336187 gagaattgttgttcccacatttgataaggttatgacacacgagta 44336231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 52805672 - 52805592
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    |||||||| ||||||||||||  ||||||||||| ||||| ||||| | |  ||||||||||  ||| |||||||| ||||    
T  52805672 gagaattgatgttcccacatttgataaggttgtggcacacaagtaatttatttttttgccccctcggcagttaactgccga 52805592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 9e-45; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 7577727 - 7577612
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||    
T  7577727 gagaattgctgttcccacattacataaggctgtgccacacgagtaaatgacgtttttacccctgcggcaattaactaccgaagtttgaaaccggctgcag 7577628  T
Q  179 ttaactactgaagttc 194  Q
    |||||||| |||||||    
T  7577627 ttaactaccgaagttc 7577612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 27704671 - 27704554
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgc 176  Q
    |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  27704671 aagagaattgctgttcccacattacataaggctgtgccacacgaataaatgacgtttttacccctgcagcagttaactaccgaagtttgaaaccggctgc 27704572  T
Q  177 agttaactactgaagttc 194  Q
    |||||||||| |||||||    
T  27704571 agttaactaccgaagttc 27704554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 7577050 - 7577165
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||  ||||||||||||||||||| |||||||||||     
T  7577050 gagaattgctgttcccacattacataaggctgtgccacatgagtaaatgacgtttttacccctgcgacagttaactaccgaagtttggaaccggctgcaa 7577149  T
Q  179 ttaactactgaagttc 194  Q
    |||||| | |||||||    
T  7577150 ttaactcccgaagttc 7577165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 27703995 - 27704110
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| |||||||||||||||||||| |||||||||| | |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||     
T  27703995 gagaattgctgttcccacattacataaggctgtgccacacaaataaatgacgtttttacccctgcggcagttaactaccgaagtttggaaccggctgcaa 27704094  T
Q  179 ttaactactgaagttc 194  Q
    |||||| | |||||||    
T  27704095 ttaactcccgaagttc 27704110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 44052367 - 44052292
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaa 152  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  44052367 aagagaattgttgttcccacattacataaggttgtggcacacgagtaaatgacgtttttgccccctcggtagttaa 44052292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 41250211 - 41250126
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||| ||||||||||||  ||||||||    
T  41250211 agagaattgttgttcccacattgcataaggttgtggcacacgagtaattgacgtttttgcccct-cggtagttaactgtcgaagttt 41250126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 82 - 193
Target Start/End: Original strand, 37577268 - 37577379
Alignment:
Q  82 aattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcagtta 181  Q
    ||||| ||||| ||||||||| |||| |||| ||||||| |||||| || ||||||| |||| ||||||||||||| ||||||| ||||| || ||| ||    
T  37577268 aattgctgttctcacattacacaaggctgtgtcacacgaataaatgccgattttgcctctgcagtagttaactacctaagtttggaaccgactacaggta 37577367  T
Q  182 actactgaagtt 193  Q
    ||||||||||||    
T  37577368 actactgaagtt 37577379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 34366846 - 34366953
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtt---tgaaaccggctg 175  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||  |||||||| ||||||||   | || |||||||    
T  34366846 gagaattgatgttcccacattacataaggctgtgccacacgagtaaaagacctttttgcccct-cgtcagttaactgccgaagttttataaatccggctg 34366944  T
Q  176 cagttaact 184  Q
    |||||||||    
T  34366945 cagttaact 34366953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 43262358 - 43262420
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||    
T  43262358 agagaattgttgttctcacattacataaggctgtgccacacgagtaaatgacgtttttacccc 43262420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 39604458 - 39604398
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccc 139  Q
    |||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  39604458 gagaattgttgtccccacattacataaggctgtgccacacgagtaattgacgtttttgccc 39604398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 39939355 - 39939296
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgc 137  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  39939355 agagaattattgttcccacattacataaggatgtgtcacacgagtaaatgacgtttttgc 39939296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 34234516 - 34234597
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    ||||||||||||||  ||||||  |||||| ||||||||||||||||||||||||||| ||||  |||||||||||| ||||    
T  34234516 agagaattgttgtttacacatttgataaggctgtgccacacgagtaaatgacgtttttaccccctcggtagttaactgccga 34234597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 39601638 - 39601746
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    |||||||| | |||||||||||||||||| ||||||||||||||||||||||||||| ||    ||  |||||||| |||||||||  |||| |||||||    
T  39601638 gagaattgctattcccacattacataaggctgtgccacacgagtaaatgacgtttttaccttctcgacagttaactgccgaagttttagaaatccggctg 39601737  T
Q  176 cagttaact 184  Q
    |||||||||    
T  39601738 cagttaact 39601746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 40740908 - 40740855
Alignment:
Q  5 tgtcgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    |||||||| |||||||| |||||||||||||||||||| |||||||||||||||    
T  40740908 tgtcgaaggatatttgggtaaattactcgtgtttctcagccaaaccaaatgtgt 40740855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 20546787 - 20546867
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    ||||||||||||||||||||   ||||||||||||||||| ||||||  ||| |||| ||||  ||| |||||||||||||    
T  20546787 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcggcagttaactaccga 20546867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 1114676 - 1114785
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactacc--gaagtttgaaa-ccggct 174  Q
    |||||||||||||||||||||   |||||| |||||||||| ||||||  ||| |||| ||||  ||| |||||||| ||  ||| ||||||| ||||||    
T  1114676 agagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaatacgattttaccccctcggcagttaactgccgagaaatttgaaatccggct 1114775  T
Q  175 gcagttaact 184  Q
    ||||||||||    
T  1114776 gcagttaact 1114785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 7120899 - 7120849
Alignment:
Q  8 cgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||| |||||| |||||||||||||||||||||| |||||| ||||||||    
T  7120899 cgaaggatatttagataaattactcgtgtttctcagccaaactaaatgtgt 7120849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 28694559 - 28694513
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||    
T  28694559 aagagaattgctgttaacacattacataaggttgtgccacacgagta 28694513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 44050747 - 44050805
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgttttt 135  Q
    |||||||||| |||||||||||| ||||||| |||| ||||||||||| ||| ||||||    
T  44050747 aagagaattgctgttcccacattgcataaggctgtggcacacgagtaattgatgttttt 44050805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 7577195 - 7577228
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    ||||||||||||||||||||||||||||||||||    
T  7577195 aaaaaaaaacctcggcactttactgccgaggaac 7577228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 7577571 - 7577538
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    ||||||||||||||||||||||||||||||||||    
T  7577571 aaaaaaaaacctcggcactttactgccgaggaac 7577538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 27704137 - 27704170
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    ||||||||||||||||||||||||||||||||||    
T  27704137 aaaaaaaaacctcggcactttactgccgaggaac 27704170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 27704513 - 27704480
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    ||||||||||||||||||||||||||||||||||    
T  27704513 aaaaaaaaacctcggcactttactgccgaggaac 27704480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 41472085 - 41472138
Alignment:
Q  5 tgtcgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||||||  ||||||| |||||||||||||||||||| ||||| |||||||||    
T  41472085 tgtcgaagggtatttgggtaaattactcgtgtttctcagccaaatcaaatgtgt 41472138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 41743824 - 41743932
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctg 175  Q
    |||||||||||||  ||| |||||||||||||| |||||||||||  | ||  |||||||||  || ||||||||| ||||  | ||||||| |||||||    
T  41743824 gagaattgttgtttacactttacataaggttgtaccacacgagtattttactcttttgccccctcgatagttaactgccgaggaatttgaaatccggctg 41743923  T
Q  176 cagttaact 184  Q
    |||||||||    
T  41743924 cagttaact 41743932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 42731824 - 42731779
Alignment:
Q  14 atatttggataaattactcgtgtttctcaaccaaaccaaatgtgta 59  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||||    
T  42731824 atatttgaataaattacttgtgtttctcagccaaaccaaatgtgta 42731779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 204805 - 204752
Alignment:
Q  82 aattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgc 137  Q
    ||||||| |||| |||||||||||||||||||||||  ||||||| ||||||||||    
T  204805 aattgttattccaacattacataaggttgtgccaca--agtaaataacgtttttgc 204752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 319642 - 319589
Alignment:
Q  82 aattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgc 137  Q
    ||||||| |||| |||||||||||||||||||||||  ||||||| ||||||||||    
T  319642 aattgttattccaacattacataaggttgtgccaca--agtaaataacgtttttgc 319589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 20549368 - 20549261
Alignment:
Q  82 aattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctgcag 178  Q
    ||||||||||  ||| ||||||||||||||||||||||||||  | ||  |||||||||  ||| |||||||| ||||  | |||||||  |||||||||    
T  20549368 aattgttgtttacactttacataaggttgtgccacacgagtattttactcttttgccccctcggcagttaactgccgaggaatttgaaattcggctgcag 20549269  T
Q  179 ttaactac 186  Q
    ||||||||    
T  20549268 ttaactac 20549261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 31745174 - 31745134
Alignment:
Q  15 tatttggataaattactcgtgtttctcaaccaaaccaaatg 55  Q
    ||||||| |||||||||||||||||||| ||||||||||||    
T  31745174 tatttgggtaaattactcgtgtttctcagccaaaccaaatg 31745134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 37577855 - 37577754
Alignment:
Q  83 attgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcagttaa 182  Q
    ||||||||||||||||||||||||| ||||          |||| || ||||| ||| ||||  ||||||||||||||||||  ||||||||||| ||||    
T  37577855 attgttgttcccacattacataaggctgtg----------aaataacatttttacccttgcgacagttaactaccgaagttttgaaccggctgcaattaa 37577766  T
Q  183 ctactgaagttc 194  Q
    |||| |||||||    
T  37577765 ctaccgaagttc 37577754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 121
Target Start/End: Complemental strand, 10749813 - 10749770
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgag 121  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||    
T  10749813 agagaattgctgtttacacattacataaggttgtgccacacgag 10749770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 16939372 - 16939329
Alignment:
Q  15 tatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||||| |||||||||||||||||||| | |||||||||||||    
T  16939372 tatttgggtaaattactcgtgtttctcagcaaaaccaaatgtgt 16939329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 20861946 - 20861985
Alignment:
Q  14 atatttggataaattactcgtgtttctcaaccaaaccaaa 53  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  20861946 atatttgggtaaattactcgtgtttctcagccaaaccaaa 20861985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 41276999 - 41276924
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaact 154  Q
    |||||||||||||||||||||  |||||| |||  ||||||||||| | || ||||||||||  ||| ||||||||    
T  41276999 gagaattgttgttcccacatttgataaggatgttgcacacgagtaatttacttttttgccccctcggcagttaact 41276924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 18441582 - 18441500
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    |||||||||||||||  |||||| ||||||| || | ||||| ||||||  |||||||||||||  ||| |||||||| ||||    
T  18441582 aagagaattgttgttgacacatttcataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgccga 18441500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 31957769 - 31957878
Alignment:
Q  80 agaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaa-accggctgc 176  Q
    |||||||||||||||||||   ||||||||||||||||| ||||||  ||| |||| ||||  ||  || ||||||||||  | ||||||  ||||||||    
T  31957769 agaattgttgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcgacagctaactaccgaggaatttgaattccggctgc 31957868  T
Q  177 agttaactac 186  Q
    ||||||||||    
T  31957869 agttaactac 31957878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 35966890 - 35966808
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    ||||||||||||||||||| |||  ||||||||||| ||||| ||||||  ||  |||||||||  ||| |||||||| ||||    
T  35966890 aagagaattgttgttcccatatttgataaggttgtgtcacactagtaaaatacaattttgccccctcggcagttaactgccga 35966808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 36345976 - 36346030
Alignment:
Q  5 tgtcgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgta 59  Q
    |||||||||| |||||  ||| |||||||||||| ||| ||||||||||||||||    
T  36345976 tgtcgaagaacatttgagtaatttactcgtgtttatcagccaaaccaaatgtgta 36346030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 39277543 - 39277585
Alignment:
Q  16 atttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||| |||| |||||||||||||||| |||||||||||||||    
T  39277543 atttgaataatttactcgtgtttctcagccaaaccaaatgtgt 39277585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 182
Target Start/End: Complemental strand, 39753140 - 39753031
Alignment:
Q  75 aaaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaag--tttgaaaccgg 172  Q
    |||||||||||||||||  ||||||  |||||| |  | ||||||||||| | || |||||| |||  ||| |||||||| |||| |  |||||||||||    
T  39753140 aaaagagaattgttgttgacacattgtataaggctcaggcacacgagtaatttacatttttgtcccatcggcagttaactgccgaggaatttgaaaccgg 39753041  T
Q  173 ctgcagttaa 182  Q
    ||||||||||    
T  39753040 ctgcagttaa 39753031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 203924 - 203957
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    ||||||||| ||||||||||||||||||||||||    
T  203924 aaaaaaaaaactcggcactttactgccgaggaac 203957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 204201 - 204168
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    |||||||||| |||||||||||||||||||||||    
T  204201 aaaaaaaaacatcggcactttactgccgaggaac 204168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 318761 - 318794
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    ||||||||| ||||||||||||||||||||||||    
T  318761 aaaaaaaaaactcggcactttactgccgaggaac 318794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 319038 - 319005
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    |||||||||| |||||||||||||||||||||||    
T  319038 aaaaaaaaacatcggcactttactgccgaggaac 319005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 545869 - 545926
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttg 136  Q
    |||||||||||||  ||||||  |||||| ||||||||| | ||||||||||||||||    
T  545869 gagaattgttgtttacacatttgataaggctgtgccacatgtgtaaatgacgtttttg 545926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 3641580 - 3641641
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    |||||||| ||||||||||||  |||||| | || ||||||||||| | |||||||||||||    
T  3641580 gagaattgatgttcccacatttgataaggctatggcacacgagtaatttacgtttttgcccc 3641641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 26451420 - 26451465
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaa 124  Q
    |||||||||| ||||||||||  ||||||||||| |||||||||||    
T  26451420 gagaattgttcttcccacatttgataaggttgtggcacacgagtaa 26451465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 32585065 - 32585024
Alignment:
Q  143 cggtagttaactaccgaagtttgaaaccggctgcagttaact 184  Q
    |||||||||||| ||||| | |||||||||||||||||||||    
T  32585065 cggtagttaactgccgaattatgaaaccggctgcagttaact 32585024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 37577408 - 37577441
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    ||||||||| ||||||||||||||||||||||||    
T  37577408 aaaaaaaaatctcggcactttactgccgaggaac 37577441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 35389438 - 35389522
Alignment:
Q  75 aaaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    |||||||||||||||||  |||||| ||||||| || | || |||||||| | ||||||||||| || ||  |||||||| ||||    
T  35389438 aaaagagaattgttgttgacacattgcataaggctgagacatacgagtaatttacgtttttgcctcttcgacagttaactgccga 35389522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 45409806 - 45409850
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    |||||||| ||||  |||||||||||||| |||||||||||||||    
T  45409806 gagaattgctgtttacacattacataaggctgtgccacacgagta 45409850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 45454337 - 45454448
Alignment:
Q  76 aaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccgg 172  Q
    ||||||||||||||||||||||||  |||||  |||| ||||| ||||||  ||| ||||||| |  ||| |||||||| ||||  | ||||||| ||||    
T  45454337 aaagagaattgttgttcccacatttgataagactgtggcacactagtaaaatacgattttgcctcctcggcagttaactgccgaggaatttgaaatccgg 45454436  T
Q  173 ctgcagttaact 184  Q
     |||||||||||    
T  45454437 atgcagttaact 45454448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 9e-45; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 79 - 233
Target Start/End: Original strand, 11687393 - 11687545
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  11687393 gagaattgctgttcccacattatataaagttgtgccacacgagtaaatgacgtttttacccctgcggcagttaactaccgaagtttaaaaccggctgcag 11687492  T
Q  179 ttaactactgaagttcgacggaaaaaaaaacctcggcactttactgccgaggaac 233  Q
    |||||| | |||    ||   ||||||||||||||||||||||||||||||||||    
T  11687493 ttaactcccgaaaaaaga--aaaaaaaaaacctcggcactttactgccgaggaac 11687545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 11688031 - 11687916
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||||||||     
T  11688031 gagaattgctgttcccacattacataaggctgtgccacacgagtaaatgacgtttttacccctgcggcagttaactaccgaagtttggaatcggctgcaa 11687932  T
Q  179 ttaactactgaagttc 194  Q
    |||||| | |||||||    
T  11687931 ttaactcccgaagttc 11687916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 11840391 - 11840304
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||||| ||| |||||||||||   ||||||||||| |||||||||    
T  11840391 aagagaattgttgttcccacattgcataaggctgtgacacacgagtaattgatgtttttgcccccttggtagttaactgccgaagttt 11840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 29076462 - 29076349
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    |||||||||||||||||| || ||||||| |||| ||||| ||||| |||||||||||||||| ||| ||||||||  ||||||||  |||| |||||||    
T  29076462 gagaattgttgttcccacgttgcataaggctgtggcacacaagtaattgacgtttttgccccttcggcagttaactgtcgaagttttagaaatccggctg 29076363  T
Q  176 cagttaactactga 189  Q
    ||||||||| ||||    
T  29076362 cagttaactgctga 29076349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 29109995 - 29109882
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    |||||||||||||||||| || ||||||| |||| ||||| ||||| |||||||||||||||| ||| ||||||||  ||||||||  |||| |||||||    
T  29109995 gagaattgttgttcccacgttgcataaggctgtggcacacaagtaattgacgtttttgccccttcggcagttaactgtcgaagttttagaaatccggctg 29109896  T
Q  176 cagttaactactga 189  Q
    ||||||||| ||||    
T  29109895 cagttaactgctga 29109882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 29111435 - 29111322
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    |||||||||||||||||| || ||||||| |||| ||||| ||||| |||||||||||||||| ||| ||||||||  ||||||||  |||| |||||||    
T  29111435 gagaattgttgttcccacgttgcataaggctgtggcacacaagtaattgacgtttttgccccttcggcagttaactgtcgaagttttagaaatccggctg 29111336  T
Q  176 cagttaactactga 189  Q
    ||||||||| ||||    
T  29111335 cagttaactgctga 29111322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 14012513 - 14012429
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||||||||||||| |||| | | |||||||| |||||||||    
T  14012513 gagaattgttgttcccacatttaataaggctgtgccacacgagtaaatgacgtttttg-cccttcagcagttaactgccgaagttt 14012429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 28362875 - 28362812
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    |||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  28362875 aagagaattgctattcccacattacataaggctgtgccacacgagtaaatgacgtttttacccc 28362812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 29065674 - 29065787
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctg 175  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||| | || ||||||||||  ||| |||||||| ||||  | || |||| |||||||    
T  29065674 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29065773  T
Q  176 cagttaactactga 189  Q
    ||||||||||||||    
T  29065774 cagttaactactga 29065787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 29074687 - 29074800
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctg 175  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||| | || ||||||||||  ||| |||||||| ||||  | || |||| |||||||    
T  29074687 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29074786  T
Q  176 cagttaactactga 189  Q
    ||||||||||||||    
T  29074787 cagttaactactga 29074800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 29079451 - 29079564
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctg 175  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||| | || ||||||||||  ||| |||||||| ||||  | || |||| |||||||    
T  29079451 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29079550  T
Q  176 cagttaactactga 189  Q
    ||||||||||||||    
T  29079551 cagttaactactga 29079564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 29107260 - 29107373
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctg 175  Q
    |||||||||||||||||||||| |||||| |||| ||||||||||| | || ||||||||||  ||| |||||||| ||||  | || |||| |||||||    
T  29107260 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaatccggctg 29107359  T
Q  176 cagttaactactga 189  Q
    ||||||||||||||    
T  29107360 cagttaactactga 29107373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 117977 - 117913
Alignment:
Q  75 aaaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccc 139  Q
    |||||||||||| ||||||||||||  ||||||||||| ||||||||||| | ||||||||||||    
T  117977 aaaagagaattgatgttcccacatttgataaggttgtgtcacacgagtaatttacgtttttgccc 117913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 29061230 - 29061310
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    |||||||| |||||||||||||||||||| |||| ||||||||||| | || ||||||||||  ||| |||||||| ||||    
T  29061230 gagaattggtgttcccacattacataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccga 29061310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 29286159 - 29286243
Alignment:
Q  75 aaaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    |||||||||||||||||  |||||| |||||||||| | ||||| ||||| | |||||||||||||  |||||||||||| ||||    
T  29286159 aaaagagaattgttgttgacacattgcataaggttgaggcacacaagtaatttacgtttttgccccctcggtagttaactgccga 29286243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 18610321 - 18610237
Alignment:
Q  102 ataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaaccggctgcagttaact 184  Q
    |||||| |||| ||||||||||||  |||||||||||||| |||||||||| | ||||  | |||||||||||||||| ||||||    
T  18610321 ataaggctgtgtcacacgagtaaaatacgtttttgccccttcggtagttaaatgccgaggaatttgaaaccggctgcatttaact 18610237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 3502761 - 3502718
Alignment:
Q  94 cacattacataaggttgtgccacacgagtaaatgacgtttttgc 137  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  3502761 cacatttcataaggttgtgtcacacgagtaaatgacgtttttgc 3502718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 15888882 - 15888924
Alignment:
Q  17 tttggataaattactcgtgtttctcaaccaaaccaaatgtgta 59  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  15888882 tttgggtaaattactcgtgtttctcagccaaaccaaatgtgta 15888924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 13164395 - 13164291
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||||||||||||||||   |  || | |||||||||||||||| ||     ||||||| ||| |||||||||||||| | |||||||||||||||    
T  13164395 gagaattgttgttcccacatttagtttggctatgccacacgagtaaattactcaaatgcccct-cggcagttaactaccgaattatgaaaccggctgcag 13164297  T
Q  179 ttaact 184  Q
    ||||||    
T  13164296 ttaact 13164291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 18605979 - 18606086
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactacc--gaagtttgaaaccggctgc 176  Q
    |||||||||||||  ||||||  || ||| || | ||||||||||||  |||||||||||||  |||||||||||| ||  | | ||||| |||||||||    
T  18605979 gagaattgttgttgacacattgtatgaggctgaggcacacgagtaaaatacgtttttgccccctcggtagttaactgcctaggaatttgacaccggctgc 18606078  T
Q  177 agttaact 184  Q
    ||||||||    
T  18606079 agttaact 18606086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 31768687 - 31768767
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    |||||||||||||||||||||  |||||| ||||  |||||||||| | || ||||||||||  ||| |||||||| ||||    
T  31768687 gagaattgttgttcccacatttgataaggctgtgtaacacgagtaatttacttttttgccccctcggcagttaactgccga 31768767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 35096651 - 35096619
Alignment:
Q  27 ttactcgtgtttctcaaccaaaccaaatgtgta 59  Q
    |||||||||||||||||||||||||||||||||    
T  35096651 ttactcgtgtttctcaaccaaaccaaatgtgta 35096619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 2050961 - 2051070
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaaccggct 174  Q
    |||||||||| | ||  |||||| ||||||| ||   ||||||||||||  |||||||||| ||| ||| |||||||| ||||  | ||||||||||| |    
T  2050961 aagagaattgctattgacacattgcataaggctgatgcacacgagtaaaatacgtttttgctccttcggcagttaactgccgatgaatttgaaaccggtt 2051060  T
Q  175 gcagttaact 184  Q
    ||||||||||    
T  2051061 gcagttaact 2051070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 34634168 - 34634134
Alignment:
Q  8 cgaagaatatttggataaattactcgtgtttctca 42  Q
    ||||||||||||||||||||||||| |||||||||    
T  34634168 cgaagaatatttggataaattactcctgtttctca 34634134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 29068397 - 29068341
Alignment:
Q  80 agaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttg 136  Q
    ||||||| ||||||||| || ||||| |||||| |||| |||||| |||||||||||    
T  29068397 agaattgctgttcccacgttgcataatgttgtggcacatgagtaattgacgtttttg 29068341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 29083644 - 29083588
Alignment:
Q  80 agaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttg 136  Q
    ||||||| ||||||||| || ||||| |||||| |||| |||||| |||||||||||    
T  29083644 agaattgctgttcccacgttgcataatgttgtggcacatgagtaattgacgtttttg 29083588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 5e-43; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 77 - 193
Target Start/End: Original strand, 17688218 - 17688334
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgc 176  Q
    |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  17688218 aagagaattgctgttcccacattacataaggctgtgccacacgaataaatgacgtttttgctcctgcggtagttaactactgaagtttggaaccggctgc 17688317  T
Q  177 agttaactactgaagtt 193  Q
    |||||||||| ||||||    
T  17688318 agttaactaccgaagtt 17688334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 76 - 184
Target Start/End: Complemental strand, 39378456 - 39378348
Alignment:
Q  76 aaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctg 175  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||  ||||||||||||||||||||||||| || ||||||    
T  39378456 aaagagaattgttgttcccacattacatatggccgtgccacacgagtaaatgacgtttttgcctttgcggtagttaactaccgaagtttggaatcggctg 39378357  T
Q  176 cagttaact 184  Q
    |||||||||    
T  39378356 cagttaact 39378348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 17688897 - 17688790
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||||||||||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  17688897 gagaattgttgttcccacatcacataaggctatgccacacgtgtaaatgacgtttttgcccctgcggtagttaactaccgaagtttggaactggcggcag 17688798  T
Q  179 ttaactac 186  Q
    ||||||||    
T  17688797 ttaactac 17688790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 28138426 - 28138309
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgc 176  Q
    |||||||||| ||||||||||||||| |||| | |||||||||||||||||||||||||| |||||||  ||||||||||||| ||||| ||||||||||    
T  28138426 aagagaattgctgttcccacattacaaaaggctatgccacacgagtaaatgacgtttttgtccctgcgacagttaactaccgatgtttggaaccggctgc 28138327  T
Q  177 agttaactactgaagttc 194  Q
    |||||||| | |||||||    
T  28138326 agttaactcccgaagttc 28138309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 28137791 - 28137906
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| | | | |||||||||| |||||||||||| || |||||    
T  28137791 gagaattgctgttcccacattatataaggttgtgccacacgagtaaatgacgtttttgcccttacagcagttaactactgaagtttgaaactggttgcag 28137890  T
Q  179 ttaactactgaagttc 194  Q
    |||||| | |||||||    
T  28137891 ttaactcccgaagttc 28137906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 39377635 - 39377723
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaa 167  Q
    |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  39377635 gagaattgctgtttccacattacataaggctgtgccacacgagtaaatgacgtttttgcctctgcggtagttaactatcgaagtttgaa 39377723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 78 - 184
Target Start/End: Complemental strand, 7190090 - 7189982
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggct 174  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| |||||||||  |||| ||||||    
T  7190090 agagaattgatgttcccacattacataaggttgtgccacacgagtaaattacgtttttgcccct-cggcagttaactgccgaagttttagaaatccggct 7189992  T
Q  175 gcagttaact 184  Q
    ||||||||||    
T  7189991 gcagttaact 7189982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 43870260 - 43870175
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| |||||||||    
T  43870260 gagaattgatgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccccatcggcagttaactgccgaagttt 43870175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 3943330 - 3943223
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||| ||| ||| |||||||| |||||||||  |||| |||||||    
T  3943330 gagaattgttgttcccacattagataaggctatgccacacgagtaaatgacgtttttgctcct-cggcagttaactgccgaagttttagaaatccggctg 3943232  T
Q  176 cagttaact 184  Q
    |||||||||    
T  3943231 cagttaact 3943223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 23346709 - 23346822
Alignment:
Q  73 tcaaaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtt---tgaaac 169  Q
    |||| ||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||   | || |    
T  23346709 tcaatagagaattgttgtttacacatttgataaggttgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactgccgaagttttataaatc 23346807  T
Q  170 cggctgcagttaact 184  Q
    |||||||||||||||    
T  23346808 cggctgcagttaact 23346822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 186
Target Start/End: Complemental strand, 23347466 - 23347357
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    |||||||| ||||  ||||||  |||||| |||||||||||||||||||||||||||| |||| ||| |||||||| |||||||||  |||| |||||||    
T  23347466 gagaattgctgtttacacatttgataaggctgtgccacacgagtaaatgacgtttttg-cccttcggcagttaactgccgaagttttagaaatccggctg 23347368  T
Q  176 cagttaactac 186  Q
    |||||||||||    
T  23347367 cagttaactac 23347357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 43978201 - 43978142
Alignment:
Q  135 tgcccctgcggtagttaactaccgaagtttgaaaccggctgcagttaactactgaagttc 194  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||    
T  43978201 tgcccctgcggtagttaactaccgaagtttgaaatcggctgcagttaactatcgaagttc 43978142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 10825175 - 10825237
Alignment:
Q  102 ataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    |||||||||||||| || ||||||| |||||||||| ||  ||||||||||||||||||||||    
T  10825175 ataaggttgtgccatacaagtaaataacgtttttgctccctcggtagttaactaccgaagttt 10825237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 35493482 - 35493400
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    |||||||||||||||  |||||| |||||||||| | ||||||||||||  ||| |||||||||  |||||||||||| ||||    
T  35493482 aagagaattgttgttgacacattgcataaggttgagacacacgagtaaaatacgcttttgccccctcggtagttaactgccga 35493400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 1149405 - 1149486
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||  ||| |||||| ||  ||| |||||||| ||||    
T  1149405 agagaattgttgttcccacatttgataaggttgtgccacactagtaaaatacgattttgctccctcggcagttaactgccga 1149486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 16544373 - 16544320
Alignment:
Q  5 tgtcgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    |||||||| |||||| |||||||||||||||||||||  |||||||||||||||    
T  16544373 tgtcgaaggatatttagataaattactcgtgtttctcggccaaaccaaatgtgt 16544320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 25184968 - 25184861
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaaccggctgc 176  Q
    |||||||||||||  || ||| |||||||||| | ||||||||||||  |||||||||||||  | | ||||||||  |||  | |||||||||||||||    
T  25184968 gagaattgttgttgacagattgcataaggttgaggcacacgagtaaaatacgtttttgccccctcagcagttaactgtcgaggaatttgaaaccggctgc 25184869  T
Q  177 agttaact 184  Q
    ||||||||    
T  25184868 agttaact 25184861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 29093971 - 29093927
Alignment:
Q  80 agaattgttgttcccacattacataaggttgtgccacacgagtaa 124  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  29093971 agaattgttgttcccacattacataaggctgtggcacacgagtaa 29093927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 43977583 - 43977635
Alignment:
Q  135 tgcccctgcggtagttaactaccgaagttt-gaaaccggctgcagttaactac 186  Q
    ||||||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  43977583 tgcccctgcggcagctaactaccgaagttttgaaaccggctgcagttaactac 43977635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 28139628 - 28139681
Alignment:
Q  5 tgtcgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||||||  |||||| ||||||||||||||||||||| ||||| |||||||||    
T  28139628 tgtcgaagggtatttgaataaattactcgtgtttctcagccaaatcaaatgtgt 28139681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 29406956 - 29406911
Alignment:
Q  23 taaattactcgtgtttctcaaccaaaccaaatgtgtagtaatactc 68  Q
    |||||||||||||||||||| ||||||||||||||| | |||||||    
T  29406956 taaattactcgtgtttctcagccaaaccaaatgtgttgcaatactc 29406911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 16340623 - 16340571
Alignment:
Q  139 cctgcggtagttaactaccgaagtttgaaaccggctgcagttaactactgaag 191  Q
    ||||||| ||||||||||||||||  | |||||| ||||||||||||||||||    
T  16340623 cctgcggcagttaactaccgaagtaaggaaccggttgcagttaactactgaag 16340571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 32956495 - 32956419
Alignment:
Q  76 aaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaa 152  Q
    ||||| ||||||||||||||| ||| ||| || | || ||||||||||| ||||||||||| |||  ||||||||||    
T  32956495 aaagaaaattgttgttcccacgttagatacggctctggcacacgagtaattgacgtttttgtcccctcggtagttaa 32956419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 3085967 - 3086018
Alignment:
Q  75 aaaagagaattgttgttcccacattacataaggttgtgccacacgagtaaat 126  Q
    |||||||||||||||||||||||||   |  |||||||||||||||||||||    
T  3085967 aaaagagaattgttgttcccacatttagtttggttgtgccacacgagtaaat 3086018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 24749617 - 24749700
Alignment:
Q  76 aaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    ||||||||||| |||||||||||   |||||| |||||||||| ||||||  ||| |||| ||||  ||| |||||||||||||    
T  24749617 aaagagaattgctgttcccacatgtgataaggctgtgccacactagtaaaatacgattttaccccctcggcagttaactaccga 24749700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 27276515 - 27276405
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggc 173  Q
    ||||||||||||||||||||||   |||||| |||||||||| ||||||  ||| |||| ||||  ||| |||||||| | ||  | ||||||| |||||    
T  27276515 aagagaattgttgttcccacatgtgataaggctgtgccacactagtaaaatacgattttaccccctcggcagttaactgctgaggaatttgaaatccggc 27276416  T
Q  174 tgcagttaact 184  Q
    |||||||||||    
T  27276415 tgcagttaact 27276405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 29090539 - 29090602
Alignment:
Q  75 aaaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcc 138  Q
    |||| |||||||||||||| |||||  ||||||||||||||||| ||||| | || ||||||||    
T  29090539 aaaaaagaattgttgttcctacatttgataaggttgtgccacactagtaatttacttttttgcc 29090602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 432085 - 432135
Alignment:
Q  135 tgcccctgcggtagttaactaccgaagtttgaaaccggctgcagttaacta 185  Q
    ||||||||||  |||||||||||||||||| ||||||| |||| |||||||    
T  432085 tgcccctgcgacagttaactaccgaagtttaaaaccggttgcaattaacta 432135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 1096533 - 1096637
Alignment:
Q  83 attgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctgcagt 179  Q
    ||||||||| |||||||  ||||||||||| ||||| ||||||  ||| |||||||||  |||  ||||||| ||||  | ||||||| |||||||||||    
T  1096533 attgttgtttccacatttgataaggttgtggcacactagtaaaatacgattttgccccctcggctgttaactgccgaggaatttgaaatccggctgcagt 1096632  T
Q  180 taact 184  Q
    |||||    
T  1096633 taact 1096637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 28138275 - 28138242
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    |||||||||||||||||||||||||| |||||||    
T  28138275 aaaaaaaaacctcggcactttactgcggaggaac 28138242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 34639453 - 34639392
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    |||||||| ||||||||||||  |||||| |||||||||| ||||| | || ||||||||||    
T  34639453 gagaattgatgttcccacatttgataaggctgtgccacactagtaatttacttttttgcccc 34639392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 39033589 - 39033552
Alignment:
Q  147 agttaactaccgaagtttgaaaccggctgcagttaact 184  Q
    |||||||||||||| | |||||||||||||||||||||    
T  39033589 agttaactaccgaattatgaaaccggctgcagttaact 39033552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 3940873 - 3940929
Alignment:
Q  80 agaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttg 136  Q
    ||||||| || |||||| |||||||  ||||||||| |||||| |||||||||||||    
T  3940873 agaattgatgatcccacgttacatagcgttgtgccatacgagtgaatgacgtttttg 3940929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 6637532 - 6637578
Alignment:
Q  143 cggtagttaactaccgaagtttg---aaaccggctgcagttaactac 186  Q
    |||||||||||| ||||||||||   |||||||||||||||||||||    
T  6637532 cggtagttaactgccgaagtttgtggaaaccggctgcagttaactac 6637578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 29074142 - 29074094
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaat 126  Q
    ||||||||||||||||||||||   |  |||||||||||||||||||||    
T  29074142 agagaattgttgttcccacatttggtttggttgtgccacacgagtaaat 29074094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 41181371 - 41181451
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    |||||||| ||||  |||||| ||||||| || | ||||||||||||  |||||||||||||  ||| |||||||| ||||    
T  41181371 gagaattgatgttgacacattgcataaggctgaggcacacgagtaaaatacgtttttgccccctcggcagttaactgccga 41181451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 41273386 - 41273342
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    |||||||||||||  ||||||||||| || |||||||||||||||    
T  41273386 gagaattgttgtttacacattacatatggctgtgccacacgagta 41273342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 2532641 - 2532526
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgca 177  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  2532641 agagaattgctgttcccacattacataaggctgtgccacacgagtaaatgacgtttttacccctgcggtaattaactaccgaagtttggaaccggctgca 2532542  T
Q  178 gttaactactgaagtt 193  Q
    ||||||| | ||||||    
T  2532541 gttaactcccgaagtt 2532526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 35777154 - 35777049
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||    
T  35777154 gagaattgatgttcccacgttacataaggttgtgccacacgagtaaatgacgtttttgcctctgcggcagttaactaccgaagtttggaaccggctgcag 35777055  T
Q  179 ttaact 184  Q
    ||||||    
T  35777054 ttaact 35777049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 2532020 - 2532127
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||     
T  2532020 gagaattgttgttcccacattacataaggctgtgccacacaagtaaatgacgtttttgctcctgcggtagttaactatcgaagtttggaaccggctgcaa 2532119  T
Q  179 ttaactac 186  Q
    ||||||||    
T  2532120 ttaactac 2532127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 13568214 - 13568106
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctg 175  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||||| ||||  | ||||||| |||||||    
T  13568214 gagaattgttgttcccacattacataaggctgtgccatacgagtaaatgacgtttttaccccatcggtagttaactgccgaggaatttgaaatccggctg 13568115  T
Q  176 cagttaact 184  Q
    |||||||||    
T  13568114 cagttaact 13568106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 7762382 - 7762298
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| |||||||| |||||||||    
T  7762382 gagaattgctgttcccacattacataaggctgtgccacacgagtaattgacgtttttgcccct-cggcagttaactgccgaagttt 7762298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 9784289 - 9784205
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtt 163  Q
    ||||||||||||||||||||||||||| |||||| ||||||| ||||||| |||||||||||||||  ||||||||| |||||||    
T  9784289 gagaattgttgttcccacattacataaagttgtgtcacacgaataaatgatgtttttgcccctgcgacagttaactatcgaagtt 9784205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 7757259 - 7757367
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    |||||||| |||||||||||||||||||  | ||||||||||||||||||||||||||||||  ||  |||||||| |||||||||  |||| |||||||    
T  7757259 gagaattgctgttcccacattacataagactatgccacacgagtaaatgacgtttttgccccctcgacagttaactgccgaagttttagaaatccggctg 7757358  T
Q  176 cagttaact 184  Q
    |||||||||    
T  7757359 cagttaact 7757367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 35564260 - 35564210
Alignment:
Q  8 cgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  35564260 cgaagaatatttgagtaaattactcgtgtttctcaaccaaaccaaatgtgt 35564210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 43094715 - 43094607
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    |||||||| ||||  ||||||  |||||||| ||||||||||||||||||||||||| ||||  ||  |||||||| |||||||||  |||| |||||||    
T  43094715 gagaattgctgtttacacatttgataaggttatgccacacgagtaaatgacgtttttaccccatcgacagttaactgccgaagttttagaaatccggctg 43094616  T
Q  176 cagttaact 184  Q
    |||||||||    
T  43094615 cagttaact 43094607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 34124073 - 34123966
Alignment:
Q  80 agaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactacc--gaagtttgaaa-ccggctgc 176  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||  ||| |||||||||  ||| ||||||||  |  ||| ||||||| ||||||||    
T  34124073 agaattgttgttcccacatttaataaggttgtgccacaccagtaaaatacgattttgccccctcggcagttaactgtcgagaaatttgaaatccggctgc 34123974  T
Q  177 agttaact 184  Q
    ||||||||    
T  34123973 agttaact 34123966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 18848095 - 18848036
Alignment:
Q  135 tgcccctgcggtagttaactaccgaagtttgaaaccggctgcagttaactactgaagttc 194  Q
    ||||||||| ||| |||||||||||||||| |||||| |||||||||||||| |||||||    
T  18848095 tgcccctgcagtaattaactaccgaagtttaaaaccgactgcagttaactaccgaagttc 18848036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 38407131 - 38407190
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttg 136  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||| | |||||||||    
T  38407131 aagagaattgttgttcccacatttgataaggttgtggcacacgagtaatttacgtttttg 38407190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 11699258 - 11699304
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaa 124  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  11699258 agagaattgatgttctcacattacataaggttgtgccacacgagtaa 11699304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 34122461 - 34122566
Alignment:
Q  82 aattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctgcag 178  Q
    |||||||||||||| |||  ||||||||||||||||  ||||||  ||| |||||||||| ||| |||||||| ||||  | ||||||| ||||||||||    
T  34122461 aattgttgttcccatatttgataaggttgtgccacattagtaaaatacgattttgccccttcggcagttaactgccgaggaatttgaaatccggctgcag 34122560  T
Q  179 ttaact 184  Q
    ||||||    
T  34122561 ttaact 34122566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 1397486 - 1397414
Alignment:
Q  82 aattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaact 154  Q
    ||||||||||||||||||  ||||||||||| ||||||||||| | || ||||||||||  ||| ||||||||    
T  1397486 aattgttgttcccacatttgataaggttgtggcacacgagtaatttacatttttgccccctcggcagttaact 1397414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 25897218 - 25897110
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaa-accggctg 175  Q
    ||||||||||||||||||||   ||||||||||||||||| ||||||  |   |||| ||||| ||| |||||||||||||  | ||||||  |||||||    
T  25897218 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaaatattattttaccccttcggcagttaactaccgaggaatttgaactccggctg 25897119  T
Q  176 cagttaact 184  Q
    |||||||||    
T  25897118 cagttaact 25897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 29413353 - 29413300
Alignment:
Q  141 tgcggtagttaactaccgaagtttgaaaccggctgcagttaactactgaagttc 194  Q
    ||||| ||||||||| ||||||||||||  |||||||||||||||| |||||||    
T  29413353 tgcggcagttaactatcgaagtttgaaattggctgcagttaactaccgaagttc 29413300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 35776766 - 35776799
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    ||||||||||||||||||||||||||||||||||    
T  35776766 aaaaaaaaacctcggcactttactgccgaggaac 35776799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 43093942 - 43094050
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    |||||||||||||  || |||  |||||| |||| |||||||||||||||||||||| ||||| |   |||||||| ||||| |||  |||| |||||||    
T  43093942 gagaattgttgtttacatatttgataaggctgtgtcacacgagtaaatgacgtttttaccccttcaacagttaactgccgaaattttagaaatccggctg 43094041  T
Q  176 cagttaact 184  Q
    |||||||||    
T  43094042 cagttaact 43094050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 25877556 - 25877612
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgttttt 135  Q
    |||||||||||||  |||||| |||||||||||| ||||||||||||  ||||||||    
T  25877556 gagaattgttgttgacacattgcataaggttgtgtcacacgagtaaaatacgttttt 25877612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 39743289 - 39743241
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaa 125  Q
    |||||||||||||||||||||||  |||||| |||||||||| ||||||    
T  39743289 aagagaattgttgttcccacatttgataaggctgtgccacactagtaaa 39743241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 30887496 - 30887441
Alignment:
Q  82 aattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgc 137  Q
    ||||||||||||||||||  |||| |||||| ||||||||||| | ||||||||||    
T  30887496 aattgttgttcccacatttgataacgttgtggcacacgagtaatttacgtttttgc 30887441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 3600269 - 3600351
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaa 160  Q
    ||||||||||||||  |||||| ||||| |||| ||||||| ||||||  | |||||||||||  ||| |||||||| |||||    
T  3600269 agagaattgttgttgacacatttcataaagttgagccacacaagtaaaatatgtttttgccccctcggcagttaactgccgaa 3600351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 35651406 - 35651364
Alignment:
Q  16 atttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||| |||| |||||||||||||||| |||||||||||||||    
T  35651406 atttgaataatttactcgtgtttctcagccaaaccaaatgtgt 35651364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 41798751 - 41798860
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaag--tttgaaa-ccggct 174  Q
    |||||||||||||||||||| |  ||||||  ||||||||| ||||||  | | |||||||||  ||| |||||||| | ||||  ||||||| ||||||    
T  41798751 agagaattgttgttcccacaattgataaggccgtgccacactagtaaaatatgattttgccccctcggcagttaactgctgaagaatttgaaatccggct 41798850  T
Q  175 gcagttaact 184  Q
    ||||||||||    
T  41798851 gcagttaact 41798860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 30705069 - 30705114
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagt 122  Q
    |||||||||||||||  |||||| ||||||| ||||||||||||||    
T  30705069 aagagaattgttgtttacacatttcataaggctgtgccacacgagt 30705114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 41799906 - 41799845
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    |||||||||||||||||||||  |||||  |||| ||||||||||| | || ||||||||||    
T  41799906 gagaattgttgttcccacatttgataagactgtgacacacgagtaatttacttttttgcccc 41799845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 11345965 - 11346001
Alignment:
Q  102 ataaggttgtgccacacgagtaaatgacgtttttgcc 138  Q
    |||||| |||||||||| |||||||||||||||||||    
T  11345965 ataaggctgtgccacacaagtaaatgacgtttttgcc 11346001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 27867959 - 27867879
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    ||||||||||||||||||||   |||||| |||||||||| ||||||  ||| |||| ||||  ||| |||||||| ||||    
T  27867959 gagaattgttgttcccacatgtgataaggctgtgccacactagtaaaatacgattttaccccctcggcagttaactgccga 27867879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 28388658 - 28388614
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    |||||||||||||  ||| |||||||||| |||||||||||||||    
T  28388658 gagaattgttgtttacactttacataaggctgtgccacacgagta 28388614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 9e-42; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 79 - 233
Target Start/End: Original strand, 5136520 - 5136673
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    ||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||  |||||||||||||| |||| ||||||||||||    
T  5136520 gagaattgttgttcccacattacataagactgtgccacacaagtaaatgacgtttttgcccctgcgacagttaactaccgaaatttggaaccggctgcag 5136619  T
Q  179 ttaactactgaagttcgacggaaaaaaaaacctcggcactttactgccgaggaac 233  Q
    |||||||| || |    |   ||||||||||||||||||||||||||||||||||    
T  5136620 ttaactaccgacg-aaaaaaaaaaaaaaaacctcggcactttactgccgaggaac 5136673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 33305097 - 33304984
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| |||||||||| ||  ||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  33305097 gagaattgctgttcccacacta--taaggttgtgccatacgagtaaatgacgtttttgtccctgcggcagttaactaccgaagtttggaaccggctgcag 33305000  T
Q  179 ttaactactgaagttc 194  Q
    ||||| || |||||||    
T  33304999 ttaacaaccgaagttc 33304984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 44687588 - 44687475
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||  ||||||||||||||||||  ||| ||||||||    
T  44687588 gagaattgttgttcccacattacataagattgtgccac--gagtaaatgacgtttttgcctctgcgacagttaactaccgaagtttagaactggctgcag 44687491  T
Q  179 ttaactactgaagttc 194  Q
    ||||||| ||||||||    
T  44687490 ttaactattgaagttc 44687475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 1388244 - 1388121
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccc-------ctgcggtagttaactaccgaagtttgaaacc 170  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||       |||||| ||||||||||||||||||| || |    
T  1388244 agagaattgttgttcccacattacataaggctgtgccacacaagtaaatgacatttttgcccctgcaagctgcggcagttaactaccgaagtttggaatc 1388145  T
Q  171 ggctgcagttaactactgaagttc 194  Q
    |||||||||||||||| |||||||    
T  1388144 ggctgcagttaactaccgaagttc 1388121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 5138406 - 5138301
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| |||| ||| |||    
T  5138406 gagaattgctgttcccacatgacataaggctgtgccacacgagtaaatgacgtttttgcccctacgacagttaactaccgaagtttggaaccagctacag 5138307  T
Q  179 ttaact 184  Q
    ||||||    
T  5138306 ttaact 5138301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 79 - 233
Target Start/End: Original strand, 13742683 - 13742833
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| ||||||||||||||| |||  | ||||| |||| |||||||||||||| | ||||||  ||||||||||||||||||||||||||||||||    
T  13742683 gagaattgctgttcccacattacaaaagactatgccatacgaataaatgacgtttttactcctgcgacagttaactaccgaagtttgaaaccggctgcag 13742782  T
Q  179 ttaactactgaagttcgacggaaaaaaaaacctcggcactttactgccgaggaac 233  Q
    |||||| ||||    |||   ||||||||| |||||||||||||| |||||||||    
T  13742783 ttaactgctga----cgaaaaaaaaaaaaaactcggcactttactaccgaggaac 13742833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 43476125 - 43476234
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa--ccggct 174  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| |||||||||  ||||  ||||||    
T  43476125 gagaattgttgttctcacattacataaggttgtgccacacgagtaaatgacgtttttgccccctcggaagttaactgccgaagttttagaaaatccggct 43476224  T
Q  175 gcagttaact 184  Q
    ||||||||||    
T  43476225 gcagttaact 43476234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 43478971 - 43478861
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||| |||||||| | |||||||  |||| |||||    
T  43478971 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgatgtttttgtcccctcggcagttaactgctgaagttttagaaatccggc 43478872  T
Q  174 tgcagttaact 184  Q
    |||||||||||    
T  43478871 tgcagttaact 43478861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 55385074 - 55385179
Alignment:
Q  82 aattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctgcag 178  Q
    |||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||  ||| |||||||| |||||||||  |||| ||||||||||    
T  55385074 aattgttgttcccacattgcataaggttgtggcacacgagtaattgacgtttttgccccctcggcagttaactgccgaagttttagaaatccggctgcag 55385173  T
Q  179 ttaact 184  Q
    ||||||    
T  55385174 ttaact 55385179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 13743244 - 13743160
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtt 163  Q
    |||||||| | ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||  |||||||| ||||||||    
T  13743244 gagaattgcttttcccacattacataagattgtgtctcacgagtaaatgacgtttttgcccctgcgacagttaactcccgaagtt 13743160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 48251008 - 48250933
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaact 154  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||  ||| ||||||||    
T  48251008 gagaattgttgttcccacattacataaggttgtgccacataaataaatgacgtttttgccccctcggcagttaact 48250933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 16647286 - 16647178
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||  |||||||||||||||  ||| |||||||| |||| ||||  |||| |||||||    
T  16647286 gagaattgttgttcccacattgcataaggttctggcacacgagtacttgacgtttttgccccctcggcagttaactgccgatgttttagaaatccggctg 16647187  T
Q  176 cagttaact 184  Q
    |||||||||    
T  16647186 cagttaact 16647178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 16484595 - 16484535
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccc 139  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  16484595 gagaattgttgtacccacattacatagggttgtgccacacgagtaaatgacatttttgccc 16484535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 3350096 - 3350037
Alignment:
Q  135 tgcccctgcggtagttaactaccgaagtttgaaaccggctgcagttaactactgaagttc 194  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  3350096 tgcccctgcagtagttaactaccgaagtttgaaatcggctgcagttaactaccgaagttc 3350037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 50216993 - 50216932
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||||||||    
T  50216993 gagaattgttgttcccacatttgataaggttgtggcacacgagtaattgacgtttttgcccc 50216932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 46989480 - 46989589
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactacc--gaagtttgaa-accggct 174  Q
    ||||||||||||||  ||||||  ||||||||||| || |||||||||||||||||||||||   ||| |||||||||||  ||| ||||||  ||||||    
T  46989480 agagaattgttgtttacacatttaataaggttgtgtcatacgagtaaatgacgtttttgccctctcggcagttaactaccgagaaatttgaattccggct 46989579  T
Q  175 gcagttaact 184  Q
    ||||||||||    
T  46989580 gcagttaact 46989589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 47070402 - 47070462
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccc 139  Q
    ||||||||||||||||||||| ||||||  |||| ||||||||||| ||||||||||||||    
T  47070402 gagaattgttgttcccacattgcataagactgtggcacacgagtaattgacgtttttgccc 47070462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 46993310 - 46993235
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaact 154  Q
    |||||||| ||||| ||||||  |||||| ||||||| ||||||||||||||||||||||||  ||| ||||||||    
T  46993310 gagaattgctgttcacacatttgataaggctgtgccatacgagtaaatgacgtttttgccccctcggcagttaact 46993235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 41137651 - 41137760
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggct 174  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||  | |||||||| ||  | | |||||||| ||||  | ||||||| ||||||    
T  41137651 agagaattgttgttcccacatttgataaggttgtgccacactagtaaaatatgtttttgctccatcagcagttaactgccgaggaatttgaaatccggct 41137750  T
Q  175 gcagttaact 184  Q
    ||||||||||    
T  41137751 gcagttaact 41137760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 600683 - 600598
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    |||||||||||||||||||||  | |||| || | |||||||||||||||||||||||| ||  ||  |||||||| |||||||||    
T  600683 gagaattgttgttcccacattgtagaaggctgcggcacacgagtaaatgacgtttttgcgccctcgacagttaactgccgaagttt 600598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 2062378 - 2062334
Alignment:
Q  15 tatttggataaattactcgtgtttctcaaccaaaccaaatgtgta 59  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||    
T  2062378 tatttggataaattactcgtatttctcagccaaaccaaatgtgta 2062334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 51696654 - 51696574
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    ||||||||||||| |||||||  |||||| |||| ||||||||||| | || ||||||||||  |||||||||||| ||||    
T  51696654 gagaattgttgttgccacatttgataaggctgtggcacacgagtaatttacttttttgccccctcggtagttaactgccga 51696574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 186
Target Start/End: Original strand, 44685870 - 44685904
Alignment:
Q  152 actaccgaagtttgaaaccggctgcagttaactac 186  Q
    |||||||||||||||||||||||||||||||||||    
T  44685870 actaccgaagtttgaaaccggctgcagttaactac 44685904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 44685942 - 44685976
Alignment:
Q  199 gaaaaaaaaacctcggcactttactgccgaggaac 233  Q
    |||||||||||||||||||||||||||||||||||    
T  44685942 gaaaaaaaaacctcggcactttactgccgaggaac 44685976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 33304234 - 33304267
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    ||||||||||||||||||||||||||||||||||    
T  33304234 aaaaaaaaacctcggcactttactgccgaggaac 33304267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 42166549 - 42166504
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||    
T  42166549 agagaattgatgtttacacattacataaggttgtgccacacgagta 42166504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 3349481 - 3349533
Alignment:
Q  135 tgcccctgcggtagttaactaccgaagttt-gaaaccggctgcagttaactac 186  Q
    |||| |||||| || ||||||||||||||| ||||||||||||||||||||||    
T  3349481 tgcctctgcggcagctaactaccgaagttttgaaaccggctgcagttaactac 3349533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 14043979 - 14044023
Alignment:
Q  15 tatttggataaattactcgtgtttctcaaccaaaccaaatgtgta 59  Q
    ||||||| |||||||||||||||||||| |||||| |||||||||    
T  14043979 tatttgggtaaattactcgtgtttctcagccaaactaaatgtgta 14044023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 54203494 - 54203550
Alignment:
Q  138 ccctgcggtagttaactaccgaagtttgaaaccggctgcagttaactactgaagttc 194  Q
    |||||||| | ||||||||| ||||||| |||||||||||||||||| | |||||||    
T  54203494 ccctgcggcaattaactaccaaagtttggaaccggctgcagttaactcccgaagttc 54203550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 7941094 - 7941059
Alignment:
Q  23 taaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    |||||||||||||||||||| |||||||||||||||    
T  7941094 taaattactcgtgtttctcagccaaaccaaatgtgt 7941059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 20485617 - 20485660
Alignment:
Q  15 tatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||    
T  20485617 tatttgggtaaattactcgtgtttctcagccaaactaaatgtgt 20485660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 47074249 - 47074202
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaat 126  Q
    |||||||||||||| || ||||||||| ||| ||||||||||||||||    
T  47074249 gagaattgttgttctcatattacataatgttctgccacacgagtaaat 47074202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 23443250 - 23443137
Alignment:
Q  74 caaaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaa-acc 170  Q
    |||| |||||||||||||||||||||  |||||| |||| ||||| ||||||  ||| |||| ||||  ||| |||||||| ||||  | ||||||  ||    
T  23443250 caaatgagaattgttgttcccacatttgataaggctgtgacacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaattcc 23443151  T
Q  171 ggctgcagttaact 184  Q
    ||||||||||||||    
T  23443150 ggctgcagttaact 23443137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 30294928 - 30294978
Alignment:
Q  8 cgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    |||| |||||||  ||||||||||||||||||||| |||||||||| ||||    
T  30294928 cgaaaaatatttaaataaattactcgtgtttctcagccaaaccaaacgtgt 30294978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 36817660 - 36817614
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaa 125  Q
    ||||||||||||||||||||   ||||||||||||||||| ||||||    
T  36817660 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaa 36817614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 45076324 - 45076374
Alignment:
Q  8 cgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||| |||||||| |||||||||||| ||||||| |||||||||| ||||    
T  45076324 cgaaggatatttgggtaaattactcgtatttctcagccaaaccaaaagtgt 45076374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 49217045 - 49217091
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaa 125  Q
    |||||||||||||||||||||  ||||| ||||||||||| ||||||    
T  49217045 gagaattgttgttcccacatttgataagattgtgccacactagtaaa 49217091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 4002643 - 4002536
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctg 175  Q
    |||||||| ||||  ||| |||||||||| |||||||||||||||  | ||  |||||||||| ||| |||||||||| ||  | ||||||| |||||||    
T  4002643 gagaattgctgtttacactttacataaggctgtgccacacgagtattttactcttttgcccct-cggcagttaactactgaggaatttgaaatccggctg 4002545  T
Q  176 cagttaact 184  Q
    |||||||||    
T  4002544 cagttaact 4002536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 36812770 - 36812881
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa--ccggct 174  Q
    |||||||| ||||  ||| |||||||||| |||||||||||||||  | ||  |||||||||  ||| ||||| |||||||  | |||||||  ||||||    
T  36812770 gagaattgctgtttacactttacataaggatgtgccacacgagtattttactcttttgccccctcggcagttagctaccgaggaatttgaaaatccggct 36812869  T
Q  175 gcagttaactac 186  Q
    ||||||||||||    
T  36812870 gcagttaactac 36812881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 44523425 - 44523372
Alignment:
Q  5 tgtcgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    |||||||| |||||| | |||||||||||||| | |||||| ||||||||||||    
T  44523425 tgtcgaaggatatttaggtaaattactcgtgtgtttcaacctaaccaaatgtgt 44523372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 4331958 - 4331914
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    |||||||| ||||  |||||||||||||| |||||||||||||||    
T  4331958 gagaattgctgtttacacattacataaggctgtgccacacgagta 4331914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 8475761 - 8475805
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    |||||||| ||||  || |||||||||||||||||||||||||||    
T  8475761 gagaattgctgtttacatattacataaggttgtgccacacgagta 8475805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 14403109 - 14403065
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    |||||||||||||  ||| |||||||||| |||||||||||||||    
T  14403109 gagaattgttgtttacactttacataaggctgtgccacacgagta 14403065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 52387719 - 52387763
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    |||||||| ||||  |||||||||||||||||||||||| |||||    
T  52387719 gagaattgctgtttgcacattacataaggttgtgccacatgagta 52387763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 40323770 - 40323665
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgcag 178  Q
    |||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  40323770 gagaattgctgttcccacattacataaggctgtgccacacaagtaaatgacgtttttgcccctgcggcagttaactaccgaagtttggaaccggctgcag 40323671  T
Q  179 ttaact 184  Q
    ||||||    
T  40323670 ttaact 40323665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 36185697 - 36185583
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgc 176  Q
    |||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||| ||||||||||    
T  36185697 aagagaattgctgtttccacattacataaggctgtgccacacgagtaaatgacgtttttgcccctgcggcagttcactaccgaaatttggaaccggctgc 36185598  T
Q  177 agttaactactgaag 191  Q
    |||||||||| ||||    
T  36185597 agttaactaccgaag 36185583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 46738736 - 46738844
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||| |||||||| |||||||||  |||| |||||||    
T  46738736 gagaattgttgttcccacattacataaggttgtgccacacgagcaaatgacgtttttgccctctcggcagttaactgccgaagttttagaaatccggctg 46738835  T
Q  176 cagttaact 184  Q
    |||||||||    
T  46738836 cagttaact 46738844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 40323202 - 40323284
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaag 161  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| | |||||||||||||    
T  40323202 gagaattgttgttcccacattacataaggctgtgccacatgagtaaatgacatttttgcccctgcggcaattaactaccgaag 40323284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 36185124 - 36185220
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagtttgaaaccggctgc 176  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||  |||||  |||||||| ||||||||||||||||||| ||||||||||    
T  36185124 gagaattgcttttcccacattccataaggttgtgccacacgagtaaatgatattttt-accctgcggcagttaactaccgaagtttggaaccggctgc 36185220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 48194712 - 48194640
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagtta 151  Q
    |||||||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||    
T  48194712 gagaattgctgttcccacattacataaggctgtgatacacgagtaaatgacgtttttgccccttcggtagtta 48194640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 47741712 - 47741775
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||  |||||||||||||    
T  47741712 aagagaattgttgttctcacattacataaggttgtgccacactagtaaaatacgtttttgcccc 47741775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 34139839 - 34139939
Alignment:
Q  87 ttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaag--tttgaaa-ccggctgcagttaac 183  Q
    |||||||||||||  ||||||||||| ||||||||||| | |||||||||||||| ||||| |||||| ||||||  || |||| |||||||||||||||    
T  34139839 ttgttcccacatttgataaggttgtggcacacgagtaatttacgtttttgccccttcggtaattaactgccgaagaattagaaatccggctgcagttaac 34139938  T
Q  184 t 184  Q
    |    
T  34139939 t 34139939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 4997910 - 4997851
Alignment:
Q  135 tgcccctgcggtagttaactaccgaagtttgaaaccggctgcagttaactactgaagttc 194  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||  |||||||    
T  4997910 tgcccctgcggtagctaactaccgaagtttgaaatcggctgcagttaactatcgaagttc 4997851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 48829895 - 48829958
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||| | |||||||||||||    
T  48829895 aagagaattgttgttcccacatttgataaggttgtggcacacgagtaatttacgtttttgcccc 48829958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 35200844 - 35200785
Alignment:
Q  135 tgcccctgcggtagttaactaccgaagttt-gaaaccggctgcagttaactactgaagtt 193  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  35200844 tgcccctgcggcagttagctaccgaagttttgaaaccggctgcagttaactaccgaagtt 35200785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 30845949 - 30845900
Alignment:
Q  9 gaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  30845949 gaagaatatttgggtaaattattcgtgtttctcaatcaaaccaaatgtgt 30845900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 46740632 - 46740575
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttg 136  Q
    |||||||||||||||||||||  |||||| |||| |||| ||||||||||||||||||    
T  46740632 gagaattgttgttcccacatttgataaggctgtgacacaagagtaaatgacgtttttg 46740575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 28115547 - 28115597
Alignment:
Q  8 cgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||| |||||||| |||||||||||||||| ||| |||||||||||||||    
T  28115547 cgaaggatatttgggtaaattactcgtgtttttcagccaaaccaaatgtgt 28115597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 29593467 - 29593421
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaa 125  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||    
T  29593467 gagaattgttgttcccacatttgataaggttgtgccacactagtaaa 29593421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 19804666 - 19804629
Alignment:
Q  149 ttaactaccgaagtttgaaaccggctgcagttaactac 186  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  19804666 ttaactaccgaagtttggaaccggctgcagttaactac 19804629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 40587608 - 40587669
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    ||||||||||| |||||||||  |||||| |||| ||||||||||| | |||||||||||||    
T  40587608 gagaattgttgatcccacatttgataaggatgtgacacacgagtaatttacgtttttgcccc 40587669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 13644414 - 13644370
Alignment:
Q  14 atatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||    
T  13644414 atatttgggtaaattactcgtgtttctcagccaaatcaaatgtgt 13644370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 40590634 - 40590550
Alignment:
Q  75 aaaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    |||||||||||||||||||||||||  |||||| || |  |||||| ||||  |||||||||||||  ||| |||||||| ||||    
T  40590634 aaaagagaattgttgttcccacatttgataaggctgagaaacacgaataaaatacgtttttgccccctcggcagttaactgccga 40590550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 43686987 - 43686927
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccc 139  Q
    |||||||| ||||||||||||  ||||||||||||||||| ||||||  ||| ||||||||    
T  43686987 gagaattgctgttcccacatttgataaggttgtgccacactagtaaaatacgattttgccc 43686927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 186
Target Start/End: Complemental strand, 31873892 - 31873853
Alignment:
Q  147 agttaactaccgaagtttgaaaccggctgcagttaactac 186  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  31873892 agttaactaccgatgtttggaaccggctgcagttaactac 31873853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 4997347 - 4997397
Alignment:
Q  137 cccctgcggtagttaactaccgaagttt-gaaaccggctgcagttaactac 186  Q
    ||||| ||| |||||||||||||||||| |||||||||| |||||||||||    
T  4997347 cccctacggcagttaactaccgaagttttgaaaccggctacagttaactac 4997397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 31873395 - 31873441
Alignment:
Q  139 cctgcggtagttaactaccgaagtttgaaaccggctgcagttaacta 185  Q
    ||||||| ||||||||||||||||||  ||||| |||||||||||||    
T  31873395 cctgcggcagttaactaccgaagtttagaaccgactgcagttaacta 31873441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 36185228 - 36185262
Alignment:
Q  199 gaaaaaaaaacctcggcactttactgccgaggaac 233  Q
    ||||||||||||||| |||||||||||||||||||    
T  36185228 gaaaaaaaaacctcgacactttactgccgaggaac 36185262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 5537800 - 5537857
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttg 136  Q
    |||||||||||||||||||||  |||||| |||| ||||||| ||| | |||||||||    
T  5537800 gagaattgttgttcccacatttgataaggctgtggcacacgaataatttacgtttttg 5537857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 11886959 - 11887008
Alignment:
Q  9 gaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    |||| |||||||| |||||||||||||||||| | |||||| ||||||||    
T  11886959 gaaggatatttgggtaaattactcgtgtttcttagccaaactaaatgtgt 11887008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 17834422 - 17834467
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaa 124  Q
    |||||||| ||||  |||||||||||||| ||||||||||||||||    
T  17834422 gagaattgatgtttacacattacataaggctgtgccacacgagtaa 17834467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 28980312 - 28980251
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    |||||||||||||  |||||| ||||||| || | ||||||||||||  |||||||||||||    
T  28980312 gagaattgttgttgacacattgcataaggctgagacacacgagtaaaatacgtttttgcccc 28980251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 29097937 - 29097970
Alignment:
Q  14 atatttggataaattactcgtgtttctcaaccaa 47  Q
    ||||||||||||||||||||||||||||| ||||    
T  29097937 atatttggataaattactcgtgtttctcagccaa 29097970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 36186608 - 36186504
Alignment:
Q  82 aattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaaccggctgcagt 179  Q
    ||||||||||  |||||| ||||||| |||| ||||||||||||  ||| |||||||||  ||| |||||| | ||||  | || |||||||| ||||||    
T  36186608 aattgttgttgacacattgcataaggctgtgtcacacgagtaaaatacgcttttgccccctcggcagttaaatgccgaggaattcgaaaccggttgcagt 36186509  T
Q  180 taact 184  Q
    |||||    
T  36186508 taact 36186504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 229
Target Start/End: Original strand, 40323292 - 40323321
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgag 229  Q
    ||||||||||||||||||||||||||||||    
T  40323292 aaaaaaaaacctcggcactttactgccgag 40323321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 41623954 - 41623893
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    |||||||| ||||  ||||||||||||||||| | ||||| ||||||  |||||||||||||    
T  41623954 gagaattgctgttgacacattacataaggttgaggcacacaagtaaaatacgtttttgcccc 41623893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 13921403 - 13921355
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaat 126  Q
    ||||||||||||||||||||||   |  |||||||||||||||||||||    
T  13921403 agagaattgttgttcccacatttggtttggttgtgccacacgagtaaat 13921355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 31512324 - 31512292
Alignment:
Q  16 atttggataaattactcgtgtttctcaaccaaa 48  Q
    |||||||||||||||| ||||||||||||||||    
T  31512324 atttggataaattactagtgtttctcaaccaaa 31512292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 38555487 - 38555535
Alignment:
Q  8 cgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgt 56  Q
    ||||| |||||||  |||||||||||||||||||  |||||||||||||    
T  38555487 cgaaggatatttgagtaaattactcgtgtttctcggccaaaccaaatgt 38555535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 44674098 - 44674206
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggct 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| |||||||||  |||| ||||||    
T  44674098 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccct-tggcagttaactgccgaagtttaagaaacccggct 44674196  T
Q  175 gcagttaact 184  Q
    ||||||||||    
T  44674197 gcagttaact 44674206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 51492005 - 51492064
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgc 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51492005 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgc 51492064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 37015864 - 37015945
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||  ||| |||||||| ||||    
T  37015864 agagaattgttgttcccacattacataaggatgtgccacatgagtaaatgacatttttgccccctcggcagttaactgccga 37015945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 39590707 - 39590622
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    |||||||| |||| |||||||| |||||| |||||||||||||||||||| |||||||||||  ||| |||||||| |||||||||    
T  39590707 gagaattgctgtttccacattatataaggctgtgccacacgagtaaatgatgtttttgccccctcggcagttaactgccgaagttt 39590622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 16983455 - 16983541
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    ||||||||||||||  ||||||  |||||| ||||||||||||||||||||||||||| ||||  ||| |||||||| |||||||||    
T  16983455 agagaattgttgtttacacatttgataaggctgtgccacacgagtaaatgacgtttttaccccctcggcagttaactgccgaagttt 16983541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 16984300 - 16984192
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt--gaaa-ccggctg 175  Q
    |||||||| ||||  ||||||  |||||| ||||||||||||||||||||||||||| ||||  ||| |||||||| |||||||||  |||| |||||||    
T  16984300 gagaattgctgtttacacatttgataaggctgtgccacacgagtaaatgacgtttttaccccctcggcagttaactgccgaagttttagaaatccggctg 16984201  T
Q  176 cagttaact 184  Q
    |||||||||    
T  16984200 cagttaact 16984192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 39588026 - 39588106
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    |||||||||||||| || ||| ||||||| |||| |||||||||||||||||||||||||||  ||| |||||||| ||||    
T  39588026 gagaattgttgttctcatattgcataaggatgtgtcacacgagtaaatgacgtttttgccccctcggcagttaactgccga 39588106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 37022189 - 37022131
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttg 136  Q
    ||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||||||    
T  37022189 agagaattgttcttcccacattatataaggttgtaccacacaagtaaatgacgtttttg 37022131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 48806477 - 48806434
Alignment:
Q  15 tatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  48806477 tatttggataaattactcgtgtttctcagccaaaccaaatgtgt 48806434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 50278939 - 50278880
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttg 136  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||| | |||||||||    
T  50278939 aagagaattgttgttcccacatttgataaggttgtggcacacgagtaatttacgtttttg 50278880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 50274694 - 50274802
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctg 175  Q
    |||||||||||||||||||||  ||| || |||| ||||||||||| | |||||||||||||  ||| |||||||| ||||  | || |||| |||||||    
T  50274694 gagaattgttgttcccacatttgatagggctgtggcacacgagtaatttacgtttttgccccctcggcagttaactgccgaggaattagaaatccggctg 50274793  T
Q  176 cagttaact 184  Q
    |||||||||    
T  50274794 cagttaact 50274802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 56138180 - 56138261
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga 159  Q
    ||||||||| ||||||||||||  ||||||||||||||||| ||||||  ||| |||||||||| ||  |||||||| ||||    
T  56138180 agagaattgctgttcccacatttgataaggttgtgccacactagtaaaatacgattttgccccttcgacagttaactgccga 56138261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 9889928 - 9890036
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctg 175  Q
    ||||||||||||||||||||   |||||| |||||||||| ||||||  ||| |||| ||||  ||| |||||||| ||||  | ||||||| |||||||    
T  9889928 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctg 9890027  T
Q  176 cagttaact 184  Q
    |||||||||    
T  9890028 cagttaact 9890036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 43176699 - 43176752
Alignment:
Q  5 tgtcgaagaatatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||||||  ||||| | |||||||||||||||||||| |||||||||||||||    
T  43176699 tgtcgaagggtatttaggtaaattactcgtgtttctcagccaaaccaaatgtgt 43176752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 6280791 - 6280851
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccc 139  Q
    |||||||||||||  |||||| |||||||||| | ||||||||||| | ||||||||||||    
T  6280791 gagaattgttgttgacacattgcataaggttggggcacacgagtaatttacgtttttgccc 6280851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 37880705 - 37880661
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    |||||||||||||  |||||||||||||| |||||||||||||||    
T  37880705 gagaattgttgtttacacattacataaggctgtgccacacgagta 37880661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 123
Target Start/End: Complemental strand, 16473817 - 16473774
Alignment:
Q  80 agaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||    
T  16473817 agaattgctgtttacacattacataaggttgtgccacacgagta 16473774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 8111497 - 8111539
Alignment:
Q  16 atttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    |||| |||||||||||||||| ||||| |||||||||||||||    
T  8111497 atttagataaattactcgtgtatctcagccaaaccaaatgtgt 8111539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 18411189 - 18411147
Alignment:
Q  16 atttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    ||||| |||| |||||||||||||||| |||||||||||||||    
T  18411189 atttgaataatttactcgtgtttctcagccaaaccaaatgtgt 18411147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 19073778 - 19073732
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaa 125  Q
    ||||||||||||||||||||   ||||||||||||||||| ||||||    
T  19073778 gagaattgttgttcccacatgtgataaggttgtgccacaccagtaaa 19073732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 28081416 - 28081477
Alignment:
Q  102 ataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    |||||| ||| ||||||||||||||| |||||||| |||| ||| |||||||| |||||||||    
T  28081416 ataaggctgtaccacacgagtaaatggcgtttttg-cccttcggcagttaactgccgaagttt 28081477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 28235700 - 28235655
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    ||||||||||||||  |||||||||||||| ||| |||||||||||    
T  28235700 agagaattgttgtttacacattacataaggctgtaccacacgagta 28235655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 28320493 - 28320538
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaa 124  Q
    |||||||||||||  |||||| |||||||||||| |||||||||||    
T  28320493 gagaattgttgttgacacattgcataaggttgtgtcacacgagtaa 28320538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 37880597 - 37880642
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    ||||||||| ||||  |||||||||||||| |||||||||||||||    
T  37880597 agagaattgctgtttacacattacataaggctgtgccacacgagta 37880642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 49889617 - 49889662
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaa 124  Q
    ||||||||| ||||||||||| |||||||||||| || ||||||||    
T  49889617 gagaattgtcgttcccacattgcataaggttgtggcatacgagtaa 49889662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 1041869 - 1041929
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccc 139  Q
    |||||||||||||||||||||  |||||| ||||  |||||||||| | || |||||||||    
T  1041869 gagaattgttgttcccacatttgataaggctgtggtacacgagtaatttacttttttgccc 1041929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 4980056 - 4980000
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgttttt 135  Q
    |||||||||||||  |||||| |||||||||| | ||||||||||| | ||||||||    
T  4980056 gagaattgttgttgacacattgcataaggttgaggcacacgagtaatttacgttttt 4980000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 37856824 - 37856868
Alignment:
Q  14 atatttggataaattactcgtgtttctcaaccaaaccaaatgtgt 58  Q
    |||||| | |||||||||||||||||| | |||||||||||||||    
T  37856824 atatttaggtaaattactcgtgtttcttagccaaaccaaatgtgt 37856868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 37959856 - 37959784
Alignment:
Q  82 aattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaact 154  Q
    ||||||||||  |||||||||||||| || | ||||||||||||  |||||||| ||||  ||| ||||||||    
T  37959856 aattgttgttgacacattacataaggctgaggcacacgagtaaaatacgtttttaccccctcggcagttaact 37959784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 56140762 - 56140686
Alignment:
Q  88 tgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    |||| |||||||  ||||||||||||||||| ||||||   || |||||||||  ||| ||||||||||||| ||||    
T  56140762 tgtttccacatttgataaggttgtgccacactagtaaaattcgattttgccccctcggcagttaactaccgaggttt 56140686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 56304811 - 56304871
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgccc 139  Q
    |||||||||||||||||||||  ||||||||| |  |||||||||||  || |||||||||    
T  56304811 gagaattgttgttcccacatttgataaggttgagaaacacgagtaaaatacatttttgccc 56304871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 16883 - 16941
Alignment:
Q  135 tgcccctgcggtagttaactaccgaagtttgaaaccggctgcagttaactactgaagtt 193  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  16883 tgcccctgcggtagttaactaccgaagtttggaaccggttgcagttaactaccgaagtt 16941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 16977 - 17010
Alignment:
Q  200 aaaaaaaaacctcggcactttactgccgaggaac 233  Q
    |||||||||||||||||||| |||||||||||||    
T  16977 aaaaaaaaacctcggcacttaactgccgaggaac 17010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 764 - 864
Alignment:
Q  87 ttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaag--tttgaaa-ccggctgcagttaac 183  Q
    |||||||||||||  ||||||||||| ||||||||||| | |||||||||||||| ||||| |||||| ||||||  || |||| |||||||||||||||    
T  764 ttgttcccacatttgataaggttgtggcacacgagtaatttacgtttttgccccttcggtaattaactgccgaagaattagaaatccggctgcagttaac 863  T
Q  184 t 184  Q
    |    
T  864 t 864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 18432 - 18347
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    |||||||||||||||||| || ||||||| |||| ||||| ||||| ||||||||||| |||| |||  ||||||| |||||||||    
T  18432 gagaattgttgttcccacgttgcataaggatgtggcacacaagtaattgacgtttttgtcccttcggcggttaactgccgaagttt 18347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 17964 - 18026
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    ||||||||| ||||||||||||  |||| |||||| ||||||||||| | |||||||||||||    
T  17964 agagaattgatgttcccacatttgataaagttgtggcacacgagtaatttacgtttttgcccc 18026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 54412 - 54497
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccgaagttt 164  Q
    |||||||||||||||||| || ||||||| |||| ||||| ||||| ||||||||||| |||| |||  ||||||| |||||||||    
T  54412 gagaattgttgttcccacgttgcataaggatgtggcacacaagtaattgacgtttttgtcccttcggcggttaactgccgaagttt 54497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 54880 - 54818
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    ||||||||| ||||||||||||  |||| |||||| ||||||||||| | |||||||||||||    
T  54880 agagaattgatgttcccacatttgataaagttgtggcacacgagtaatttacgtttttgcccc 54818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 13346 - 13299
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaat 126  Q
    |||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  13346 gagaattgctgtttccacattacataaggctgtgccacacgagtaaat 13299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 17490 - 17382
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaaa-ccggctg 175  Q
    |||||||| |||||||||||   ||||||||||||||||| ||||||  ||| |||| ||||  ||| |||||||| ||||  | ||||||| |||||||    
T  17490 gagaattgctgttcccacatgtgataaggttgtgccacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctg 17391  T
Q  176 cagttaact 184  Q
    |||||||||    
T  17390 cagttaact 17382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 8782 - 8750
Alignment:
Q  27 ttactcgtgtttctcaaccaaaccaaatgtgta 59  Q
    |||||||||||||||||||||||||||||||||    
T  8782 ttactcgtgtttctcaaccaaaccaaatgtgta 8750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 4539 - 4493
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaa 125  Q
    ||||||||||||||||||||   ||||||||||||||||| ||||||    
T  4539 gagaattgttgttcccacatgtgataaggttgtgccacactagtaaa 4493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 19161 - 19207
Alignment:
Q  77 aagagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    |||||||||||||||  ||| |||||||||| |||||||||||||||    
T  19161 aagagaattgttgtttacactttacataaggctgtgccacacgagta 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 11235 - 11343
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccctgcggtagttaactaccga--agtttgaa-accggctg 175  Q
    |||||||| ||||||||||||  |||||| |||||||||| ||||||  ||| |||| ||||  ||| |||||||| ||||  | ||||||  |||||||    
T  11235 gagaattgctgttcccacatttgataaggctgtgccacactagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaattccggctg 11334  T
Q  176 cagttaact 184  Q
    |||||||||    
T  11335 cagttaact 11343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 16095 - 16050
Alignment:
Q  78 agagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    ||||||||| ||||  ||| ||||||||||||||||||||||||||    
T  16095 agagaattgctgtttacactttacataaggttgtgccacacgagta 16050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 1787 - 1723
Alignment:
Q  76 aaagagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcccc 140  Q
    ||||||||||| ||||  |||||| ||||||| || | ||||||||||| | |||||||||||||    
T  1787 aaagagaattgatgttgacacattgcataaggctgaggcacacgagtaatttacgtttttgcccc 1723  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 235867 - 235911
Alignment:
Q  79 gagaattgttgttcccacattacataaggttgtgccacacgagta 123  Q
    |||||||||||||  |||||||||||||| |||| ||||||||||    
T  235867 gagaattgttgtttacacattacataaggctgtgtcacacgagta 235911  T

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