View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18718_high_10 (Length: 250)

Name: NF18718_high_10
Description: NF18718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18718_high_10
NF18718_high_10
[»] chr3 (16 HSPs)
chr3 (1-242)||(19581317-19581558)
chr3 (11-240)||(19549158-19549387)
chr3 (17-240)||(19538989-19539216)
chr3 (14-223)||(19563421-19563634)
chr3 (56-242)||(19593462-19593648)
chr3 (35-242)||(19603635-19603842)
chr3 (11-132)||(18479233-18479354)
chr3 (12-214)||(19557181-19557384)
chr3 (14-132)||(19626157-19626274)
chr3 (11-132)||(32150895-32151017)
chr3 (38-231)||(19653528-19653723)
chr3 (2-132)||(19646657-19646788)
chr3 (63-215)||(19609555-19609705)
chr3 (26-132)||(19612269-19612375)
chr3 (205-240)||(18479389-18479424)
chr3 (54-217)||(19617208-19617373)
[»] chr6 (1 HSPs)
chr6 (17-240)||(18025102-18025325)
[»] chr7 (5 HSPs)
chr7 (24-132)||(21605006-21605114)
chr7 (26-218)||(21594229-21594420)
chr7 (26-132)||(21581836-21581942)
chr7 (30-109)||(21601493-21601569)
chr7 (146-218)||(21587317-21587389)


Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 19581558 - 19581317
Alignment:
Q  1 atttataaagccgaagtgcaagaaaaagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19581558 atttataaagccgaagtgcaagaaaaagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcc 19581459  T
Q  101 caagagaaagtaccgggaaatgtgttttgccannnnnnngtgaaaattttatcttaggactctattattgcttgttctcgcagtatgcatagcaaacttc 200  Q
    ||||||||||||| ||||||||||||||||||       ||||||||||||||||| ||||||||||||  ||||||||||| |||||||||||||||||    
T  19581458 caagagaaagtactgggaaatgtgttttgccatttttttgtgaaaattttatcttaagactctattattttttgttctcgcaatatgcatagcaaacttc 19581359  T
Q  201 aacttcattatatagtactcatgatatgattttacctttgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19581358 aacttcattatatagtactcatgatatgattttacctttgct 19581317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 240
Target Start/End: Complemental strand, 19549387 - 19549158
Alignment:
Q  11 ccgaagtgcaagaaaaagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaag 110  Q
    ||||||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||    
T  19549387 ccgaagtgcaagagaatgaaatagaacttaaggttcaaagttcgtatgtttcttacctgaagttagaaccaacgcaatgcataaaattcccaagagacag 19549288  T
Q  111 taccgggaaatgtgttttgccannnnnnngtgaaaattttatcttaggactctattattgcttgttctcgcagtatgcatagcaaacttcaacttcatta 210  Q
    ||| | ||||||||||||||||       ||||| ||||||| |||| ||||||||||   ||||||| | | |||| ||| |||||||||| |||||||    
T  19549287 tactgagaaatgtgttttgccatttttttgtgaagattttattttagaactctattatcttttgttcttgaaatatgaataacaaacttcaagttcatta 19549188  T
Q  211 tatagtactcatgatatgattttacctttg 240  Q
    ||||||||||||||||||||||||| ||||    
T  19549187 tatagtactcatgatatgattttacttttg 19549158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 19539216 - 19538989
Alignment:
Q  17 tgcaagaaaaagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtaccgg 116  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||| |||||||||| |||||| ||||| ||    
T  19539216 tgcaagaaaaagaaatagaacttaaggttcaaagttcatatgtttcttacctgaagctagaaccaacgcaatgcataaaattcctaagagacagtactgg 19539117  T
Q  117 gaaatgtgttttgccannnnnnngtgaaaa----ttttatcttaggactctattattgcttgttctcgcagtatgcatagcaaacttcaacttcattata 212  Q
     |||||||||||||||       ||||| |    ||||||||||| ||||||||||   ||||||||| | |||| ||| |||||||||| |||||||||    
T  19539116 aaaatgtgttttgccatttttttgtgaagaattcttttatcttagaactctattatcttttgttctcgtaatatgaataacaaacttcaagttcattata 19539017  T
Q  213 tagtactcatgatatgattttacctttg 240  Q
    ||||||||||||||||||||||||||||    
T  19539016 tagtactcatgatatgattttacctttg 19538989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 19563634 - 19563421
Alignment:
Q  14 aagtgcaagaaaaagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtac 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||  ||||| ||||||||||||||||| ||||     
T  19563634 aagtgcaagaaaaagaaatagaacttaaggttcaaagttcatatgtttcttacctgaagctagaatcaacacaatgcataaaattcccaagagacagtat 19563535  T
Q  114 cgggaaatgtgttttgccannnnnnngtgaaaa----ttttatcttaggactctattattgcttgttctcgcagtatgcatagcaaacttcaacttcatt 209  Q
     ||||||||||||||||||       ||||| |    ||||||||||| ||||||||||   ||||||||| | |||| ||| |||||||||| ||||||    
T  19563534 tgggaaatgtgttttgccatttttttgtgaagaattcttttatcttagaactctattatcttttgttctcgtaatatgaataacaaacttcaagttcatt 19563435  T
Q  210 atatagtactcatg 223  Q
    ||||||||||||||    
T  19563434 atatagtactcatg 19563421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 56 - 242
Target Start/End: Complemental strand, 19593648 - 19593462
Alignment:
Q  56 atgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtaccgggaaatgtgttttgccannnnnnngtgaaaattttatctt 155  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||| |||||||| ||  |||||||||||  |||||       |||||  |||||||      
T  19593648 atgtttcttacctgaagctagaaccaacgcaatgcataaaattcctaagagaaaatattgggaaatgtgtcctgccatttttttgtgaattttttatcca 19593549  T
Q  156 aggactctattattgcttgttctcgcagtatgcatagcaaacttcaacttcattatatagtactcatgatatgattttacctttgct 242  Q
    || |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19593548 agaactctattattgtttgttctcgcaatatgtatagcaaacttcaacttcattatatagtactcatgatatgattttacctttgct 19593462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 35 - 242
Target Start/End: Complemental strand, 19603842 - 19603635
Alignment:
Q  35 aacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtaccgggaaatgtgttttgccann 134  Q
    ||||| ||||| |||||||||||||||||||||  ||| |||||||||  ||||| ||||||||||||||||||| ||  | ||||||||||||||||      
T  19603842 aacttgaggttcaaagttcatatgtttcttacccaaagctagaaccaacacaatgcataaaattcccaagagaaaatattgcgaaatgtgttttgccatt 19603743  T
Q  135 nnnnngtgaaaattttatcttaggactctattattgcttgttctcgcagtatgcatagcaaacttcaacttcattatatagta-ctcatgatatgatttt 233  Q
         || ||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| | || || ||||||||    
T  19603742 tttt-gttaaaattttatcttagaactctattattgtttgttctcgcaatatgcataacaaacttcaacttcattatatagtaccccacgacatgatttt 19603644  T
Q  234 acctttgct 242  Q
    |||||||||    
T  19603643 acctttgct 19603635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 18479233 - 18479354
Alignment:
Q  11 ccgaagtgcaagaaaaagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaag 110  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||| | ||    
T  18479233 ccgaagtgcaagagaaagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagctagaaccaacgcaatgcataaaattcccaagaaacag 18479332  T
Q  111 taccgggaaatgtgttttgcca 132  Q
    | | ||||||||||||||||||    
T  18479333 tgctgggaaatgtgttttgcca 18479354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 19557384 - 19557181
Alignment:
Q  12 cgaagtgcaagaaaaagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagt 111  Q
    ||||||||| |||| ||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| | |    
T  19557384 cgaagtgcaggaaagagaaattaaacttaaggttgaaagttcatatgtttcttacctgaagctagaaccaaggcaatgtataaaattcccaagagacaat 19557285  T
Q  112 accgggaaatgtgttttgcca-nnnnnnngtgaaaattttatcttaggactctattattgcttgttctcgcagtatgcatagcaaacttcaacttcatta 210  Q
    |  |||||||| |||| | ||        ||||| |||||||||||| ||||||||||   ||||||||| | |||| ||| |||||||||| || ||||    
T  19557284 attgggaaatgggtttcgacattttttttgtgaagattttatcttagaactctattatcttttgttctcgtaatatgaataacaaacttcaagtttatta 19557185  T
Q  211 tata 214  Q
    ||||    
T  19557184 tata 19557181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 19626274 - 19626157
Alignment:
Q  14 aagtgcaagaaaaagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtac 113  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||| ||| ||||     
T  19626274 aagtgcaagaaaaagaaatagaacttaaggtttaaa-ttcatatgtttcttacctgaagttagaaccaacgcaatgcataaaattgccaatagacagtaa 19626176  T
Q  114 cgggaaatgtgttttgcca 132  Q
     | ||||||||||||||||    
T  19626175 tgagaaatgtgttttgcca 19626157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 32150895 - 32151017
Alignment:
Q  11 ccgaagtgcaagaaaaagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagtt-agaaccaatgcaatgaataaaattcccaagagaaa 109  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||| |||||| |||||||| |||||||| |    
T  32150895 ccgaagtacaagaaaaagaaatagaacttaaggttcaaagttcatatgtttcttaattgaagttaagaaccaacgcaatgcataaaattgccaagagaca 32150994  T
Q  110 gtaccgggaaatgtgttttgcca 132  Q
    ||||  |||||||||||||||||    
T  32150995 gtactcggaaatgtgttttgcca 32151017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 231
Target Start/End: Complemental strand, 19653723 - 19653528
Alignment:
Q  38 ttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtaccgggaaatgtgttttgccannnnn 137  Q
    |||||||| |||||||||||||||||||||| ||||||||||||| |||||| |||||||| |||||||| ||||| ||||||||||||||||||         
T  19653723 ttaaggttcaaagttcatatgtttcttacctaaagttagaaccaacgcaatgcataaaattgccaagagacagtactgggaaatgtgttttgccattttt 19653624  T
Q  138 nngtgaaaattttatcttaggactctattattgcttgttctcgcagtatgcatagcaaacttcaacttcattatat---agtactcatgatatgatt 231  Q
       |||| |||||||||||   |||||||||   ||||| ||||| ||||||||| ||||| ||| ||||||||||   || |||||||||||||||    
T  19653623 ta-tgaagattttatcttatagctctattatcttttgttttcgcaatatgcatagaaaactccaagttcattatatagcagaactcatgatatgatt 19653528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 19646788 - 19646657
Alignment:
Q  2 tttataaagccgaagtgcaagaaaaagaaatagaactt-aaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcc 100  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||| ||  |||||||||| |||||||||||||| ||||||||| |||||| |||||||| |    
T  19646788 tttacaaaaccgaagtgcaagaaaaagaaataaaactttaagattcgaagttcatatatttcttacctgaagctagaaccaacgcaatgcataaaattgc 19646689  T
Q  101 caagagaaagtaccgggaaatgtgttttgcca 132  Q
     |||||| ||||| || |||||| ||||||||    
T  19646688 taagagacagtactggaaaatgttttttgcca 19646657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 215
Target Start/End: Complemental strand, 19609705 - 19609555
Alignment:
Q  63 ttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtaccgggaaatgtgttttgccannnnnnngtgaaaattttatcttaggactc 162  Q
    |||||| ||| |||||||||  ||||| ||||||||||||||||| | ||| ||||||||||||||||||       ||||| ||||||||||||  |||    
T  19609705 ttacctaaagctagaaccaacacaatgcataaaattcccaagagacaatactgggaaatgtgttttgccattttt--gtgaagattttatcttagagctc 19609608  T
Q  163 tattattgcttgttctcgcagtatgcatagcaaacttcaacttcattatatag 215  Q
    |||||||| ||||| ||||| |||||| ||||||||| || ||||||||||||    
T  19609607 tattattgtttgttttcgcaatatgcacagcaaacttaaagttcattatatag 19609555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 19612375 - 19612269
Alignment:
Q  26 aagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtaccgggaaatgtgt 125  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||| ||||||||| |||||| | ||||||||||| ||| | ||  |||||||||||    
T  19612375 aagaaatataacttaatgttgaaagtttatatgtttcttacctgaagctagaaccaacgcaatgcagaaaattcccaaaagacaatattgggaaatgtgt 19612276  T
Q  126 tttgcca 132  Q
    |||||||    
T  19612275 tttgcca 19612269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 240
Target Start/End: Original strand, 18479389 - 18479424
Alignment:
Q  205 tcattatatagtactcatgatatgattttacctttg 240  Q
    ||||||||||||||||||||||||||||||||||||    
T  18479389 tcattatatagtactcatgatatgattttacctttg 18479424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 19617373 - 19617208
Alignment:
Q  54 atatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtaccgggaaatgtgttttgccannnnnnngt---gaaaatttt 150  Q
    |||||||||||||| |||| ||||||||| |||||| |||||| ||| |||||||| ||  || |||| | ||||||||        |   ||| |||||    
T  19617373 atatgtttcttacccgaagctagaaccaacgcaatgcataaaactccaaagagaaaatattggaaaatatattttgccattttttttttttgaagatttt 19617274  T
Q  151 atcttaggactctattattgcttgttctcgcagtatgcatagcaaacttcaacttcattatatagta 217  Q
    ||||| | | | |||||| | ||||| ||||| ||||||||||||||||||| ||||||||||||||    
T  19617273 atctttg-agtttattatcgtttgttttcgcaatatgcatagcaaacttcaagttcattatatagta 19617208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 18025325 - 18025102
Alignment:
Q  17 tgcaagaaaaagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtaccgg 116  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| |||||| |||||||| |||| ||| | ||  |     
T  18025325 tgcaagaaaaagaaatagaacctaaggttgaaagttcatatgtttcttacctgaggctagaaccaacgcaatgcataaaattgccaacagacaatattga 18025226  T
Q  117 gaaatgtgttttgccannnnnnngtgaaaattttatcttaggactctattattgcttgttctcgcagtatgcatagcaaacttcaacttcattatatagt 216  Q
    ||||| ||||||||||       ||||| |||||||||||| ||||||||||   |||||||| || |||| ||| ||||||| || |||||||||||||    
T  18025225 gaaatatgttttgccatttttttgtgaagattttatcttagaactctattatcttttgttctcccaatatgaataacaaactttaaattcattatatagt 18025126  T
Q  217 actcatgatatgattttacctttg 240  Q
    ||| |||||||||| || ||||||    
T  18025125 acttatgatatgatattgcctttg 18025102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 21605114 - 21605006
Alignment:
Q  24 aaaagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtaccgggaaatgt 123  Q
    |||||||||||||||||||||| ||| || ||||||||||||||||||| | ||||||| |||||| | |||| |||||||||||| ||  |||||||||    
T  21605114 aaaagaaatagaacttaaggttcaaaattaatatgtttcttacctgaagcttgaaccaacgcaatgcacaaaagtcccaagagaaaatattgggaaatgt 21605015  T
Q  124 gttttgcca 132  Q
    | |||||||    
T  21605014 ggtttgcca 21605006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 218
Target Start/End: Original strand, 21594229 - 21594420
Alignment:
Q  26 aagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtaccgggaaatgtgt 125  Q
    |||||||||||| |||| || ||| || ||| |||||||||| |||| ||||||||| |||||||| |||| | |||||| ||| ||  |||  || |||    
T  21594229 aagaaatagaacgtaagattaaaattttatacgtttcttacccgaagctagaaccaacgcaatgaacaaaagtgccaagaaaaaatattgggctatatgt 21594328  T
Q  126 tttgccannnnnnngtgaaaattttatcttaggactctattattgcttgttctcgcagtatgcatagcaaacttcaacttcattatatagtac 218  Q
    |||||||        || | |||||||||||| ||||||||||   ||||||||| | ||||||  |||||||||||  ||||||||||||||    
T  21594329 tttgccatttttct-tgtagattttatcttagaactctattatattttgttctcgtattatgcaatgcaaacttcaagctcattatatagtac 21594420  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 21581942 - 21581836
Alignment:
Q  26 aagaaatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaagtaccgggaaatgtgt 125  Q
    |||||||||||| ||||  | ||||||||||| |||||||||  |||||||  |||| |||||||| |||| ||||| |||||| ||  ||||||| |||    
T  21581942 aagaaatagaacgtaagaatcaaagttcatatatttcttacccaaagttagggccaacgcaatgaacaaaagtcccacgagaaaatattgggaaatatgt 21581843  T
Q  126 tttgcca 132  Q
    |||||||    
T  21581842 tttgcca 21581836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 21601569 - 21601493
Alignment:
Q  30 aatagaacttaaggttgaaagttcatatgtttcttacctgaagttagaaccaatgcaatgaataaaattcccaagagaaa 109  Q
    |||||||||||||||| |||||||| |||   |||||| ||||  |||||||| |||||| |||||| ||||||||||||    
T  21601569 aatagaacttaaggttcaaagttcagatg---cttacccgaagccagaaccaacgcaatgcataaaagtcccaagagaaa 21601493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 21587317 - 21587389
Alignment:
Q  146 attttatcttaggactctattattgcttgttctcgcagtatgcatagcaaacttcaacttcattatatagtac 218  Q
    |||||||||||| ||||||||||   ||||||| ||| ||||||| ||||||||| | || ||||||||||||    
T  21587317 attttatcttagaactctattatcttttgttcttgcattatgcattgcaaacttctagttgattatatagtac 21587389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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