View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18718_high_6 (Length: 305)
Name: NF18718_high_6
Description: NF18718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18718_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 80 - 288
Target Start/End: Original strand, 9049373 - 9049581
Alignment:
| Q |
80 |
gtacttcaaaaaattctgtaaatttttcatttgtctttgtagttttaatgacccttttgtttttactatctaattcatggaaatgaagtattgaaagaat |
179 |
Q |
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| T |
9049373 |
gtacttaaaaaaattctgttaatttttcatttttgtttatagttttagtgacccttttgtttctactttgtaattcatggaaatgaagcattgaaagaat |
9049472 |
T |
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| Q |
180 |
gaaaacaatgnnnnnnnnntcnnnnnnnnnnnngtagaagagagaaaaaagaaggtggatttttaggaaaccagtgaatcatgaaacagtgaataatact |
279 |
Q |
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| T |
9049473 |
gaaaacaacgtaaataaaatatttcttatttttgtagaagagagaaaaaagaaggtggatttttaggaaaccagtgaatcatgaaacagtgaataatact |
9049572 |
T |
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| Q |
280 |
caacaaagt |
288 |
Q |
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| T |
9049573 |
caacaaagt |
9049581 |
T |
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