View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18719_low_11 (Length: 298)

Name: NF18719_low_11
Description: NF18719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18719_low_11
NF18719_low_11
[»] chr1 (42 HSPs)
chr1 (150-289)||(51087203-51087342)
chr1 (71-289)||(35954902-35955120)
chr1 (71-289)||(36731149-36731367)
chr1 (150-289)||(7153407-7153546)
chr1 (150-289)||(24781548-24781686)
chr1 (150-289)||(29521389-29521528)
chr1 (150-289)||(29649067-29649206)
chr1 (155-289)||(46118723-46118857)
chr1 (150-287)||(44511807-44511944)
chr1 (150-247)||(7556716-7556813)
chr1 (150-224)||(5327259-5327333)
chr1 (150-252)||(12768687-12768789)
chr1 (151-289)||(25656324-25656462)
chr1 (150-289)||(33705087-33705226)
chr1 (155-254)||(30302407-30302506)
chr1 (151-234)||(52405141-52405224)
chr1 (151-234)||(52406574-52406657)
chr1 (150-289)||(10773218-10773357)
chr1 (150-289)||(36308325-36308468)
chr1 (150-241)||(33005839-33005930)
chr1 (150-289)||(14488205-14488344)
chr1 (71-124)||(51087368-51087421)
chr1 (150-287)||(48128265-48128401)
chr1 (71-126)||(10773381-10773436)
chr1 (71-126)||(7153570-7153625)
chr1 (71-126)||(30302324-30302379)
chr1 (71-126)||(52405231-52405286)
chr1 (71-126)||(52406664-52406719)
chr1 (72-126)||(25656486-25656540)
chr1 (73-126)||(14488128-14488181)
chr1 (73-126)||(14536717-14536770)
chr1 (71-126)||(12768813-12768868)
chr1 (71-121)||(29521310-29521360)
chr1 (72-126)||(33005761-33005815)
chr1 (72-126)||(33705250-33705304)
chr1 (72-126)||(46118884-46118938)
chr1 (150-182)||(14536794-14536826)
chr1 (71-126)||(29648988-29649043)
chr1 (71-126)||(36308492-36308547)
chr1 (71-126)||(44511733-44511788)
chr1 (71-126)||(48128425-48128480)
chr1 (75-124)||(24781394-24781443)
[»] chr8 (51 HSPs)
chr8 (71-285)||(43694489-43694703)
chr8 (71-289)||(13140637-13140855)
chr8 (150-289)||(45408620-45408759)
chr8 (150-289)||(18955984-18956123)
chr8 (150-289)||(6093861-6094000)
chr8 (155-289)||(30556098-30556233)
chr8 (150-289)||(42736126-42736265)
chr8 (150-289)||(277267-277406)
chr8 (150-289)||(638443-638582)
chr8 (150-289)||(824249-824388)
chr8 (151-254)||(42645881-42645984)
chr8 (150-289)||(2081675-2081814)
chr8 (150-289)||(38060640-38060779)
chr8 (151-289)||(27912927-27913065)
chr8 (151-289)||(27959346-27959484)
chr8 (150-247)||(39858554-39858651)
chr8 (150-247)||(40303771-40303868)
chr8 (150-241)||(28085299-28085390)
chr8 (150-289)||(15882833-15882972)
chr8 (150-289)||(44256623-44256762)
chr8 (150-241)||(18088921-18089012)
chr8 (150-241)||(30111304-30111395)
chr8 (150-251)||(40617093-40617194)
chr8 (71-126)||(3850713-3850768)
chr8 (150-289)||(23346562-23346701)
chr8 (171-289)||(25583023-25583141)
chr8 (150-206)||(3850646-3850702)
chr8 (71-126)||(30556011-30556066)
chr8 (71-126)||(36192116-36192171)
chr8 (71-126)||(39858675-39858730)
chr8 (71-126)||(41545534-41545589)
chr8 (71-126)||(42646011-42646066)
chr8 (71-126)||(42736271-42736326)
chr8 (71-126)||(45408554-45408609)
chr8 (150-289)||(36191953-36192092)
chr8 (71-126)||(638364-638419)
chr8 (72-126)||(15882755-15882809)
chr8 (71-124)||(6095493-6095546)
chr8 (195-289)||(16096423-16096517)
chr8 (71-126)||(277430-277485)
chr8 (71-126)||(824170-824225)
chr8 (71-126)||(27913090-27913145)
chr8 (71-126)||(27959509-27959564)
chr8 (71-126)||(38060561-38060616)
chr8 (72-126)||(30111419-30111473)
chr8 (71-109)||(40303693-40303731)
chr8 (150-182)||(26950212-26950244)
chr8 (150-190)||(41545488-41545528)
chr8 (150-197)||(4622158-4622205)
chr8 (71-125)||(18956148-18956203)
chr8 (85-126)||(2081610-2081651)
[»] chr4 (45 HSPs)
chr4 (71-289)||(23932892-23933110)
chr4 (71-289)||(46718202-46718420)
chr4 (150-289)||(34073514-34073653)
chr4 (150-289)||(16665153-16665292)
chr4 (150-289)||(23418718-23418857)
chr4 (150-289)||(52447882-52448021)
chr4 (150-289)||(41040960-41041099)
chr4 (150-250)||(31292108-31292208)
chr4 (150-282)||(13533983-13534115)
chr4 (150-289)||(30826918-30827057)
chr4 (150-289)||(7487762-7487903)
chr4 (151-289)||(3035230-3035367)
chr4 (150-289)||(17361595-17361734)
chr4 (150-289)||(20786509-20786648)
chr4 (150-289)||(54919893-54920031)
chr4 (154-253)||(50495679-50495778)
chr4 (150-289)||(4653465-4653604)
chr4 (150-289)||(49874230-49874368)
chr4 (150-254)||(35825063-35825168)
chr4 (154-289)||(20342759-20342894)
chr4 (154-289)||(20353484-20353619)
chr4 (150-247)||(35045516-35045613)
chr4 (71-124)||(49874394-49874447)
chr4 (71-126)||(13533904-13533959)
chr4 (71-126)||(31292030-31292085)
chr4 (71-126)||(35045619-35045672)
chr4 (71-126)||(16665316-16665371)
chr4 (71-126)||(20342676-20342731)
chr4 (71-126)||(20353401-20353456)
chr4 (71-126)||(30826839-30826894)
chr4 (71-126)||(34073659-34073714)
chr4 (71-126)||(35825192-35825247)
chr4 (71-126)||(41040881-41040936)
chr4 (71-126)||(52448045-52448100)
chr4 (71-126)||(20786430-20786485)
chr4 (71-126)||(27958824-27958879)
chr4 (71-126)||(54920055-54920110)
chr4 (72-126)||(17361758-17361812)
chr4 (150-188)||(27958903-27958941)
chr4 (183-285)||(27961891-27961993)
chr4 (71-126)||(3035150-3035205)
chr4 (71-126)||(23418639-23418694)
chr4 (71-126)||(50495596-50495651)
chr4 (71-117)||(4653637-4653683)
chr4 (75-124)||(4653312-4653361)
[»] chr2 (29 HSPs)
chr2 (71-289)||(2291628-2291846)
chr2 (150-289)||(38281666-38281805)
chr2 (150-287)||(39068416-39068554)
chr2 (150-253)||(39774574-39774677)
chr2 (150-289)||(1054550-1054689)
chr2 (150-289)||(3906309-3906448)
chr2 (150-289)||(39966564-39966703)
chr2 (150-287)||(77035-77172)
chr2 (154-254)||(27551009-27551109)
chr2 (71-247)||(15399518-15399694)
chr2 (150-252)||(3851205-3851307)
chr2 (150-253)||(3754345-3754448)
chr2 (150-289)||(4737645-4737784)
chr2 (150-289)||(37724910-37725049)
chr2 (150-253)||(42080275-42080378)
chr2 (150-228)||(6645208-6645286)
chr2 (150-289)||(15153051-15153190)
chr2 (71-126)||(1054471-1054526)
chr2 (71-126)||(38281587-38281642)
chr2 (71-126)||(4737566-4737621)
chr2 (71-126)||(6645310-6645365)
chr2 (75-126)||(39774517-39774568)
chr2 (71-126)||(3754266-3754321)
chr2 (71-126)||(3851126-3851181)
chr2 (71-126)||(3906230-3906285)
chr2 (71-126)||(37724831-37724886)
chr2 (73-109)||(39068335-39068371)
chr2 (71-126)||(76956-77011)
chr2 (71-104)||(39966485-39966518)
[»] chr3 (77 HSPs)
chr3 (73-289)||(38697354-38697570)
chr3 (154-289)||(3892086-3892222)
chr3 (150-289)||(23020297-23020436)
chr3 (150-289)||(45170506-45170645)
chr3 (150-289)||(4232476-4232615)
chr3 (150-289)||(8851185-8851324)
chr3 (150-289)||(11122112-11122251)
chr3 (150-241)||(55411762-55411853)
chr3 (154-289)||(18410727-18410862)
chr3 (150-289)||(40906648-40906787)
chr3 (150-289)||(41697494-41697633)
chr3 (150-289)||(43338859-43338998)
chr3 (150-289)||(44842594-44842733)
chr3 (150-289)||(50547881-50548020)
chr3 (150-289)||(51722198-51722337)
chr3 (71-289)||(40424203-40424421)
chr3 (150-240)||(10827123-10827213)
chr3 (150-289)||(22605381-22605520)
chr3 (150-289)||(30439689-30439828)
chr3 (150-289)||(45053117-45053256)
chr3 (150-289)||(50609950-50610089)
chr3 (150-254)||(22428330-22428437)
chr3 (150-254)||(42826527-42826631)
chr3 (150-241)||(53777760-53777851)
chr3 (150-289)||(37785944-37786083)
chr3 (150-289)||(41102183-41102322)
chr3 (150-289)||(47912340-47912479)
chr3 (157-254)||(6175057-6175154)
chr3 (151-292)||(30363081-30363223)
chr3 (150-254)||(27325084-27325188)
chr3 (150-254)||(27331321-27331425)
chr3 (150-254)||(37219600-37219704)
chr3 (150-286)||(30042889-30043025)
chr3 (150-289)||(2218501-2218640)
chr3 (150-289)||(16464429-16464568)
chr3 (150-247)||(31313020-31313117)
chr3 (150-247)||(38236062-38236159)
chr3 (150-254)||(27126723-27126827)
chr3 (150-241)||(16009347-16009438)
chr3 (71-126)||(31312959-31313014)
chr3 (71-126)||(51722137-51722192)
chr3 (71-126)||(30362931-30362986)
chr3 (71-126)||(37181323-37181378)
chr3 (71-126)||(43339022-43339077)
chr3 (71-126)||(55411877-55411932)
chr3 (171-289)||(13213972-13214090)
chr3 (71-126)||(4232397-4232452)
chr3 (71-126)||(10827062-10827117)
chr3 (71-126)||(18410890-18410945)
chr3 (71-126)||(27126851-27126906)
chr3 (71-126)||(27325005-27325060)
chr3 (71-126)||(27331242-27331297)
chr3 (71-126)||(37219521-37219576)
chr3 (71-126)||(40906811-40906866)
chr3 (71-126)||(41697415-41697470)
chr3 (71-126)||(47912279-47912334)
chr3 (154-204)||(37181406-37181456)
chr3 (72-126)||(53777700-53777754)
chr3 (71-126)||(2218664-2218719)
chr3 (71-126)||(3892003-3892058)
chr3 (71-126)||(16464592-16464647)
chr3 (71-126)||(18762597-18762652)
chr3 (71-126)||(22428251-22428306)
chr3 (71-126)||(22605544-22605599)
chr3 (71-126)||(23020460-23020515)
chr3 (71-126)||(30042810-30042865)
chr3 (71-126)||(42826652-42826707)
chr3 (71-126)||(45053038-45053093)
chr3 (71-126)||(50547802-50547857)
chr3 (72-126)||(16009462-16009516)
chr3 (72-126)||(37786107-37786161)
chr3 (71-126)||(8851106-8851161)
chr3 (71-126)||(30439610-30439665)
chr3 (71-126)||(38236183-38236238)
chr3 (71-126)||(41102346-41102401)
chr3 (151-180)||(18762542-18762571)
chr3 (155-191)||(30363017-30363053)
[»] chr7 (54 HSPs)
chr7 (71-286)||(48606906-48607121)
chr7 (151-289)||(30759450-30759589)
chr7 (154-289)||(47504110-47504245)
chr7 (150-288)||(48683752-48683890)
chr7 (150-287)||(5373905-5374042)
chr7 (150-289)||(724887-725026)
chr7 (150-289)||(44458657-44458796)
chr7 (154-254)||(23593930-23594030)
chr7 (150-289)||(3415507-3415646)
chr7 (150-289)||(40015041-40015180)
chr7 (154-289)||(46554855-46554990)
chr7 (150-289)||(20120515-20120653)
chr7 (150-254)||(41858007-41858111)
chr7 (150-254)||(48951636-48951740)
chr7 (150-282)||(9662959-9663091)
chr7 (150-289)||(28588968-28589107)
chr7 (150-289)||(33245993-33246132)
chr7 (154-241)||(17967679-17967766)
chr7 (150-289)||(18994320-18994459)
chr7 (150-251)||(41336831-41336932)
chr7 (150-241)||(21730241-21730332)
chr7 (150-289)||(4925434-4925573)
chr7 (150-289)||(21815891-21816030)
chr7 (150-289)||(44883233-44883372)
chr7 (150-254)||(46935631-46935735)
chr7 (150-289)||(47908360-47908499)
chr7 (150-241)||(16276924-16277015)
chr7 (72-124)||(21730358-21730410)
chr7 (168-289)||(44522310-44522431)
chr7 (71-126)||(5373826-5373881)
chr7 (71-126)||(9662880-9662935)
chr7 (71-126)||(4925597-4925652)
chr7 (71-126)||(16276845-16276900)
chr7 (71-126)||(17967595-17967650)
chr7 (71-126)||(44458578-44458633)
chr7 (71-126)||(44883396-44883451)
chr7 (71-122)||(46935570-46935621)
chr7 (71-126)||(48683914-48683969)
chr7 (72-126)||(44521366-44521420)
chr7 (71-109)||(47504291-47504329)
chr7 (73-126)||(48951559-48951612)
chr7 (71-126)||(20120677-20120732)
chr7 (71-126)||(21816054-21816109)
chr7 (71-126)||(33245914-33245969)
chr7 (71-126)||(41336956-41337011)
chr7 (71-126)||(41857928-41857983)
chr7 (71-126)||(46554772-46554827)
chr7 (71-126)||(47908281-47908336)
chr7 (71-126)||(724808-724863)
chr7 (71-126)||(18994241-18994296)
chr7 (71-126)||(23593847-23593902)
chr7 (71-126)||(30759370-30759425)
chr7 (150-200)||(8392831-8392881)
chr7 (71-109)||(40014962-40015000)
[»] chr6 (23 HSPs)
chr6 (150-289)||(28579086-28579225)
chr6 (150-289)||(955041-955180)
chr6 (150-289)||(11154087-11154226)
chr6 (150-292)||(23573543-23573684)
chr6 (71-247)||(25118782-25118958)
chr6 (150-253)||(21860795-21860898)
chr6 (150-254)||(27782986-27783090)
chr6 (154-289)||(11837051-11837186)
chr6 (150-289)||(14104475-14104614)
chr6 (150-289)||(4589277-4589416)
chr6 (150-224)||(27440445-27440519)
chr6 (78-126)||(28579231-28579279)
chr6 (71-126)||(11836967-11837022)
chr6 (71-126)||(15288440-15288495)
chr6 (71-126)||(4589216-4589271)
chr6 (72-126)||(11154009-11154063)
chr6 (71-126)||(954962-955017)
chr6 (71-126)||(23573708-23573763)
chr6 (71-126)||(24083749-24083804)
chr6 (71-126)||(27440543-27440598)
chr6 (72-126)||(14104625-14104679)
chr6 (150-191)||(24083702-24083743)
chr6 (150-214)||(15288501-15288565)
[»] chr5 (33 HSPs)
chr5 (150-289)||(9592285-9592424)
chr5 (150-289)||(39588936-39589075)
chr5 (150-292)||(12499882-12500024)
chr5 (154-254)||(9986752-9986852)
chr5 (150-289)||(30130345-30130484)
chr5 (71-289)||(13304777-13304995)
chr5 (150-254)||(31551555-31551659)
chr5 (150-289)||(19665438-19665577)
chr5 (150-289)||(27019522-27019661)
chr5 (150-289)||(42611654-42611793)
chr5 (150-254)||(37270928-37271032)
chr5 (151-254)||(27551296-27551399)
chr5 (150-289)||(744994-745133)
chr5 (150-289)||(15420828-15420967)
chr5 (150-289)||(824235-824373)
chr5 (150-239)||(11985175-11985263)
chr5 (154-241)||(37939895-37939982)
chr5 (71-126)||(11985287-11985342)
chr5 (71-126)||(37271056-37271111)
chr5 (150-289)||(20545581-20545719)
chr5 (71-126)||(9986668-9986723)
chr5 (71-126)||(15420991-15421046)
chr5 (71-126)||(27551423-27551478)
chr5 (72-126)||(9592448-9592502)
chr5 (71-126)||(744915-744970)
chr5 (71-126)||(12500048-12500103)
chr5 (71-126)||(20545520-20545575)
chr5 (71-126)||(27019443-27019498)
chr5 (71-126)||(37939811-37939866)
chr5 (71-126)||(39589081-39589136)
chr5 (71-126)||(42611575-42611630)
chr5 (72-126)||(31551478-31551532)
chr5 (71-126)||(19665601-19665656)
[»] scaffold0208 (2 HSPs)
scaffold0208 (150-227)||(5226-5303)
scaffold0208 (71-118)||(5147-5194)
[»] scaffold0060 (2 HSPs)
scaffold0060 (150-252)||(56765-56867)
scaffold0060 (71-126)||(56896-56951)
[»] scaffold0075 (2 HSPs)
scaffold0075 (151-289)||(18704-18843)
scaffold0075 (71-126)||(18637-18692)
[»] scaffold0003 (2 HSPs)
scaffold0003 (150-224)||(46842-46916)
scaffold0003 (71-126)||(46763-46818)
[»] scaffold0115 (2 HSPs)
scaffold0115 (166-254)||(21423-21511)
scaffold0115 (71-126)||(22634-22689)
[»] scaffold0259 (1 HSPs)
scaffold0259 (172-227)||(5497-5552)


Alignment Details
Target: chr1 (Bit Score: 99; Significance: 7e-49; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 51087342 - 51087203
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||||||    
T  51087342 cttggttgtgaggtagttaattataacaattgagtaagtcatgtgttgtactttgagggctgctagcaggtgttgccgttgtgattttgtgggagtctgc 51087243  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||||||||||||||||    
T  51087242 tagcatttttttggttgctgctgaaattgttatgtgatga 51087203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 71 - 289
Target Start/End: Complemental strand, 35955120 - 35954902
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttgannnnnnnnnnnnnnnnnnnnnnncttggttgtgaggtagttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                       |||||||||||||||||||||    
T  35955120 caaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttcttttttatttgatttttcttggttgtgaggtagttaat 35955021  T
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgc 270  Q
    |||||||||||| |||||||| ||||||||||||||  ||||||| |||||||||||||||||| |||||| ||||||||||||       |||||||||    
T  35955020 tataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgttgtgatgttgtgggagtctgctagcatttttttggttgctgc 35954921  T
Q  271 tgaaattgttatgtgatga 289  Q
    |||||| ||||||||||||    
T  35954920 tgaaatagttatgtgatga 35954902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 71 - 289
Target Start/End: Complemental strand, 36731367 - 36731149
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttgannnnnnnnnnnnnnnnnnnnnnncttggttgtgaggtagttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                       ||||||||||| |||||||||    
T  36731367 caaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctttttgatttgatttttcttggttgtgaagtagttaat 36731268  T
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgc 270  Q
    |||||||||||| |||||||| ||||||||||||||  ||||||| || |||||||| |||||| |||||| ||||||||||||       |||||||||    
T  36731267 tataacaattgagtaagtcatctgttgtactttgagggctgctagcagctgttgccgctgtgatgttgtgggagtctgctagcatttttttggttgctgc 36731168  T
Q  271 tgaaattgttatgtgatga 289  Q
    |||||| ||||| ||||||    
T  36731167 tgaaatggttatctgatga 36731149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 7153546 - 7153407
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  7153546 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 7153447  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  7153446 tagcatttttttggttgctgctgaaatggttatgtgatga 7153407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 24781686 - 24781548
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||||||| ||||||||||| |||||| |||| | ||| |||    
T  24781686 cttggttgtgaggtagttaattataacaattgagtaa-tcatctgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtaggagtttgc 24781588  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  24781587 tagcatttttttggttgctgctgaaatggttatgtgatga 24781548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 29521389 - 29521528
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||  |||||  ||||||| ||||||||||| |||||| || ||| |||||||    
T  29521389 cttggttgtgaggtagttaattgtaacaattgagtaagtcatctgttgtatattgagggctgctagcaggtgttgccgctgtgatgttatgggagtctgc 29521488  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  29521489 tagcatttttttggttgctgctgaaatggttatgtgatga 29521528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 29649067 - 29649206
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| |||||||| ||||||||| | |||||| |||||| ||| |||    
T  29649067 cttggttgtgaggtagttaattattacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgctgctgtgatgttgtgggagtttgc 29649166  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       | ||||||||||||| ||||||| ||||    
T  29649167 tagcattttttcgcttgctgctgaaatggttatgttatga 29649206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 46118857 - 46118723
Alignment:
Q  155 ttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagca 254  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| |  ||| |||||| ||| ||||||||    
T  46118857 ttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgccgcttcgatgttgtgggagtttgctagca 46118758  T
Q  255 nnnnnnnggttgctgctgaaattgttatgtgatga 289  Q
           ||||||||||||||| ||||||| ||||    
T  46118757 ttttttcggttgctgctgaaatggttatgtcatga 46118723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 287
Target Start/End: Original strand, 44511807 - 44511944
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  44511807 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 44511906  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgat 287  Q
    || ||       ||||||||||||||| ||||||||||    
T  44511907 tatcatttttttggttgctgctgaaatggttatgtgat 44511944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 7556813 - 7556716
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtct 247  Q
    ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||  ||||||| ||||||||||| |||||| |||||| |||||    
T  7556813 cttggttgtgatgtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtct 7556716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 5327333 - 5327259
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttg 224  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||    
T  5327333 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttg 5327259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 12768789 - 12768687
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||| ||| ||||||||| | |||||| |||||| ||| |||    
T  12768789 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgaggactgttagcaggtgttgcagctgtgatgttgtgggagtttgc 12768690  T
Q  250 tag 252  Q
    |||    
T  12768689 tag 12768687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 289
Target Start/End: Complemental strand, 25656462 - 25656324
Alignment:
Q  151 ttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgct 250  Q
    |||||||||||||||||||||||||||||||| |||||||| | |||||||||||| |||||||| |||||| | || |||||| |||||| ||| ||||    
T  25656462 ttggttgtgaggtagttaattataacaattgagtaagtcatctattgtactttgaggactgctagcaggtgtcg-cgctgtgatgttgtgggagtttgct 25656364  T
Q  251 agca-nnnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    ||||        ||||||||||||||| ||||||||||||    
T  25656363 agcatttttttcggttgctgctgaaatggttatgtgatga 25656324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 33705226 - 33705087
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| ||||||  || |||    
T  33705226 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggtgtttgc 33705127  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| | |||||||| |||||||||||    
T  33705126 tagcatttttttggttgtttctgaaatttttatgtgatga 33705087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 254
Target Start/End: Original strand, 30302407 - 30302506
Alignment:
Q  155 ttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagca 254  Q
    |||||||||||||||||||||||||||| |||||||| | |||||||||||| |||||||| ||||||||||| |  ||| |||||| ||| ||||||||    
T  30302407 ttgtgaggtagttaattataacaattgagtaagtcatctattgtactttgaggactgctagcaggtgttgccgcttcgatgttgtgggagtttgctagca 30302506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 52405224 - 52405141
Alignment:
Q  151 ttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgat 234  Q
    |||||| ||||||| |||||||||| |||||| |||||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  52405224 ttggttatgaggtaattaattataataattgagtaagtcatttgttgtactttgaggactgctagtaggtgttgccgctgtgat 52405141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 52406657 - 52406574
Alignment:
Q  151 ttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgat 234  Q
    |||||| ||||||| |||||||||| |||||| |||||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  52406657 ttggttatgaggtaattaattataataattgagtaagtcatttgttgtactttgaggactgctagtaggtgttgccgctgtgat 52406574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 10773357 - 10773218
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||| |  ||||||| ||||||||||| |||||| ||||||  || |||    
T  10773357 cttggttgtgaggtagttaattataacaattgagtaaatcattcgttgtactttgggggctgctagcaggtgttgccgctgtgatgttgtgggtgtttgc 10773258  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| | ||||||| ||||||||||||    
T  10773257 tagcatttttttggttgttactgaaatggttatgtgatga 10773218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 36308468 - 36308325
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaac----tgctagtaggtgttgccgttgtgattttgtggtagt 245  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  |     ||||| |||||||||||||||||| |||||| |||    
T  36308468 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggccgctagctagcaggtgttgccgttgtgatgttgtgggagt 36308369  T
Q  246 ctgctagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
     ||||||||       ||||||||||||||| ||||||| ||||    
T  36308368 ttgctagcatttttttggttgctgctgaaatggttatgttatga 36308325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 33005839 - 33005930
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtgg 241  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||  ||| ||||||||  |||||||| ||||||||||| |||||| ||||||    
T  33005839 cttggttgtgaagtagttaattatatcaattgagtaagtcatccgttatactttgatgactgctagcaggtgttgccgctgtgatgttgtgg 33005930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 14488205 - 14488344
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||||||||||||||||||||||||  || ||||  |||||| ||||||  ||  ||| ||||||| ||| |||||| |||||| ||| |||    
T  14488205 cttggttgtgaggtagttaattataacaattgagaaaatcatccgttgtattttgagggctaatagcaggtgttaccgctgtgatgttgtgggagtttgc 14488304  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  14488305 tagcatttttttggttgttgctgaaatggttatgtgatga 14488344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 51087421 - 51087368
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgactt 124  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  51087421 caaatatcgtgagaattgtcgttatttccagtaccacgtcagatatggtgactt 51087368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 287
Target Start/End: Complemental strand, 48128401 - 48128265
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||| |||||||||||||||||||| ||| ||||  |||||| ||||||   |||||| ||||||||||| |  ||| |||||| ||| |||    
T  48128401 cttggttgtgag-tagttaattataacaattgagtaaatcatccgttgtaatttgagggttgctagcaggtgttgccgctacgatgttgtgggagtttgc 48128303  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgat 287  Q
    |||||       ||||||||||||||| ||||||||||    
T  48128302 tagcatttttttggttgctgctgaaatggttatgtgat 48128265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 10773436 - 10773381
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  10773436 caaatatcgtgagaattgtcgttatttccagtacaacgtcaggtatgatgacttga 10773381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 7153625 - 7153570
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  7153625 caaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 7153570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 30302324 - 30302379
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||||| |||||    
T  30302324 caaatatcgtgagaattgccgttatttccagaaccacgtcaggtatggtggcttga 30302379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 52405286 - 52405231
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||| |||||||||||||||||||| || ||||||| ||||||||||||||||    
T  52405286 caaatattgtgagaattgtcgttatttctagaaccacgtcaggtatggtgacttga 52405231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 52406719 - 52406664
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||| |||||||||||||||||||| || ||||||| ||||||||||||||||    
T  52406719 caaatattgtgagaattgtcgttatttctagaaccacgtcaggtatggtgacttga 52406664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 25656540 - 25656486
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||||||||| | ||||| ||| ||||    
T  25656540 aaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatgttgatttga 25656486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 14488128 - 14488181
Alignment:
Q  73 aatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||| || | ||||||| ||||||||    
T  14488128 aatatcgtgagaattgtcgttatttccagtacaacttcaggtatgatgacttga 14488181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 14536717 - 14536770
Alignment:
Q  73 aatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||| || | ||||||| ||||||||    
T  14536717 aatatcgtgagaattgtcgttatttccagtacaacttcaggtatgatgacttga 14536770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 12768868 - 12768813
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||||||| ||||| | | ||||||||||||||    
T  12768868 caaatatcgtgagaattgccgttatttccagaaccacatcaagtatggtgacttga 12768813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 29521310 - 29521360
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtga 121  Q
    |||||||| ||||||||||| ||||||| |||||||||| |||||||||||    
T  29521310 caaatatcatgagaattgtcattatttctagtaccacgtcaggtatggtga 29521360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 33005761 - 33005815
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||| |||||||||||||||||||||| ||||| | | ||||||||||||||    
T  33005761 aaatatcttgagaattgtcgttatttccagaaccacatcacgtatggtgacttga 33005815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 33705304 - 33705250
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||||||||| |||| ||||||| || |||||    
T  33705304 aaatatcgtgagaattgttgttatttccagtacaacgtcaggtatgatggcttga 33705250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 46118938 - 46118884
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||  |||||||||| | ||||||| ||||||||||||||||    
T  46118938 aaatatcgtgagaattaccgttatttcctgaaccacgtcaggtatggtgacttga 46118884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 182
Target Start/End: Original strand, 14536794 - 14536826
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattga 182  Q
    |||||||||||||||||||||||||||||||||    
T  14536794 cttggttgtgaggtagttaattataacaattga 14536826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 29648988 - 29649043
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||| |||||||||||||||||  ||||||| |||||  |||||||||    
T  29648988 caaatatcgtgataattgtcgttatttccataaccacgtcaggtacagtgacttga 29649043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 36308547 - 36308492
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||  |||| || |||| ||||||||    
T  36308547 caaatatcgtgagaattgccgttatttccagtataacgtcagatatgatgacttga 36308492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 44511733 - 44511788
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||  ||||| |||| ||||||| ||||||||    
T  44511733 caaatatcgtgagaattgccgttatttttagtacaacgtcaggtatgatgacttga 44511788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 48128480 - 48128425
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||| |||||| |||| || |||| ||||||||    
T  48128480 caaatatcgtgagaattgccgttattttcagtacaacgtcagttatgatgacttga 48128425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 24781394 - 24781443
Alignment:
Q  75 tatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgactt 124  Q
    ||||||||||||||||||| |||| || ||||||| |||||| |||||||    
T  24781394 tatcgtgagaattgtcgttgtttctagaaccacgtcaggtatcgtgactt 24781443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 71 - 285
Target Start/End: Original strand, 43694489 - 43694703
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttgannnnnnnnnnnnnnnnnnnnnnncttggttgtgaggtagttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||                       |||||||||||||||||||||    
T  43694489 caaatatcgtgagaattgtcgttatttccagtaccacgtcagatatggtgacttgatttttctttttgatttaatttttcttggttgtgaggtagttaat 43694588  T
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgc 270  Q
    |||| ||||||| |||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| ||||||||||||       |||||||||    
T  43694589 tatagcaattgagtaagtcatgtgttgtactttgagggctgctagcaggtgttgccgttgtgattttgtgggagtctgctagcatttttttggttgctgc 43694688  T
Q  271 tgaaattgttatgtg 285  Q
    |||||||||||||||    
T  43694689 tgaaattgttatgtg 43694703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 289
Target Start/End: Original strand, 13140637 - 13140855
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttgannnnnnnnnnnnnnnnnnnnnnncttggttgtgaggtagttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                       |||||||||||||||||||||    
T  13140637 caaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctttttgatttgatatttcttggttgtgaggtagttaat 13140736  T
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgc 270  Q
    ||||| |||||| |||||||||||||||||||| ||  ||||| | ||||||||||| | ||||||||||| ||||||||||||       |||||||||    
T  13140737 tataataattgagtaagtcatgtgttgtactttaagggctgcttgcaggtgttgccgctttgattttgtggaagtctgctagcatttttttggttgctgc 13140836  T
Q  271 tgaaattgttatgtgatga 289  Q
    |||||||||||||||||||    
T  13140837 tgaaattgttatgtgatga 13140855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 45408620 - 45408759
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||| |||||| |||||| ||| |||    
T  45408620 cttggttgtgaggtagttaattataacaattgagtaagtcatgtgttgtactttgagcactgctagcagatgttgccgctgtgatgttgtgggagtttgc 45408719  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       |||||||| |||||| ||||||||||||    
T  45408720 tagcattttttcggttgctgttgaaatggttatgtgatga 45408759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 18956123 - 18955984
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  |||||||||||||||||||||||||| ||||||  || |||    
T  18956123 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagcgctgctagtaggtgttgccgttgtgatgttgtgggggtttgc 18956024  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  18956023 tagcatttttttggttgttgctgaaatggttatgtgatga 18955984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 6094000 - 6093861
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||  ||| |||    
T  6094000 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgtgagtttgc 6093901  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  6093900 tagcatttttttggttgctgctgaaatggttatgtgatga 6093861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 30556098 - 30556233
Alignment:
Q  155 ttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagca 254  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| |||||| |||||| ||||||||| ||    
T  30556098 ttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtctgctaaca 30556197  T
Q  255 -nnnnnnnggttgctgctgaaattgttatgtgatga 289  Q
            ||||||||||||||| ||||||||||||    
T  30556198 tttttttcggttgctgctgaaatggttatgtgatga 30556233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 42736265 - 42736126
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  42736265 cttggttgtgaagtagtaaattataacaattgagtaagtcatatgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 42736166  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  42736165 tagcatttttttggttgctgctgaaatggttatgtgatga 42736126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 277406 - 277267
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||||||| | ||||||||| |||||| |||||| ||| |||    
T  277406 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagcaagtgttgccgctgtgatgttgtgggagtttgc 277307  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  277306 tagcatttttttggttgatgctgaaatggttatgtgatga 277267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 638443 - 638582
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||||||| | ||||||||| |||||| |||||| ||| |||    
T  638443 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagcaagtgttgccgctgtgatgttgtgggagtttgc 638542  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  638543 tagcatttttttggttgatgctgaaatggttatgtgatga 638582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 824249 - 824388
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||||||| | ||||||||| |||||| |||||| ||| |||    
T  824249 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagcaagtgttgccgctgtgatgttgtgggagtttgc 824348  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  824349 tagcatttttttggttgatgctgaaatggttatgtgatga 824388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 151 - 254
Target Start/End: Complemental strand, 42645984 - 42645881
Alignment:
Q  151 ttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgct 250  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| |||||  |||||| ||| || |    
T  42645984 ttggttgtgaggtagttaattataacaattgagtaagtcatttgttgtactttgaggactgctagcaggtgttgccgctgtgacgttgtgggagtttgtt 42645885  T
Q  251 agca 254  Q
    ||||    
T  42645884 agca 42645881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 2081675 - 2081814
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| | |||| |||||| ||| |||    
T  2081675 cttggttgtgaggtagttaattataacaattgagtaaatcattcgttgtactttgagggctgctagcaggtgttgccgctctgatgttgtgggagtttgc 2081774  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  2081775 tagcatttttttggttgttgctgaaatggttatgtgatga 2081814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 38060640 - 38060779
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| | ||||||||||||  ||||||| |||| |||||| |||||| |||||| ||| |||    
T  38060640 cttggttgtgaggtagttaattataacaattgagtaaatcatctattgtactttgagggctgctagcaggttttgccgctgtgatgttgtgggagtttgc 38060739  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  38060740 tagcatttttttggttgatgctgaaatggttatgtgatga 38060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 289
Target Start/End: Complemental strand, 27913065 - 27912927
Alignment:
Q  151 ttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgct 250  Q
    ||||||||||| |||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| ||||    
T  27913065 ttggttgtgagatagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgct 27912966  T
Q  251 agcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    ||||        |||||||||||||| ||||||||||||    
T  27912965 agcattttttttgttgctgctgaaatggttatgtgatga 27912927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 289
Target Start/End: Complemental strand, 27959484 - 27959346
Alignment:
Q  151 ttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgct 250  Q
    ||||||||||| |||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| ||||    
T  27959484 ttggttgtgagatagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgct 27959385  T
Q  251 agcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    ||||        |||||||||||||| ||||||||||||    
T  27959384 agcattttttttgttgctgctgaaatggttatgtgatga 27959346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 39858651 - 39858554
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtct 247  Q
    ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||  ||||||| ||||||||||| |||||| |||||| |||||    
T  39858651 cttggttgtgatgtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtct 39858554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 40303771 - 40303868
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtct 247  Q
    ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||  ||||||| ||||||||||| |||||| |||||| |||||    
T  40303771 cttggttgtgatgtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtct 40303868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 28085299 - 28085390
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtgg 241  Q
    |||| |||||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| |||||| ||||||    
T  28085299 cttgattgtgaagtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgg 28085390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 15882833 - 15882972
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||| ||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  15882833 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtaatttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 15882932  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
     ||||       |||| |||||||||| ||||||||||||    
T  15882933 aagcatttttttggttcctgctgaaatggttatgtgatga 15882972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 44256762 - 44256623
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||||||||||||||||||||||||  |  ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  44256762 cttggttgtgaggtagttaattataacaattgaggatatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 44256663  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||| ||||    
T  44256662 tagcatttttttggttgctgctgaaatggttatgttatga 44256623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 18088921 - 18089012
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtgg 241  Q
    ||||||| ||||| ||||| ||||||||||||| |||||||| |||||||||||||| |||| ||| |||||||||||||||||| ||||||    
T  18088921 cttggttatgaggcagttatttataacaattgagtaagtcatctgttgtactttgaggactgatagcaggtgttgccgttgtgatgttgtgg 18089012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 30111395 - 30111304
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtgg 241  Q
    ||||||||||| ||||||||||||||||||| | ||||||||  ||||||||||||| |||||||| ||||||||||| |||||| ||||||    
T  30111395 cttggttgtgaagtagttaattataacaattaagtaagtcatccgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgg 30111304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 40617194 - 40617093
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||| ||||||||||| | |||||||||  ||||| |||||| ||| |||    
T  40617194 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttaagaactgctagcaagtgttgccgcagtgatgttgtgggagtttgc 40617095  T
Q  250 ta 251  Q
    ||    
T  40617094 ta 40617093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 3850768 - 3850713
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3850768 caaatatcgtgagaattgtcgttatttccagtaccacttaaggtatggtgacttga 3850713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 23346562 - 23346701
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||| |||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| |||| |||||| | |||| |||||| ||||| |    
T  23346562 cttggttgtgagttagttaattataacaattgagtaaatcatcagttgtactttgagggctgctagcaggttttgccgctctgatgttgtgggagtctcc 23346661  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||        |||| ||||||||| ||||||||||||    
T  23346662 tagcattttttttgttgttgctgaaatggttatgtgatga 23346701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 25583023 - 25583141
Alignment:
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgc 270  Q
    |||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||  |||||| |||||| ||| ||||||||       |||||||||    
T  25583023 tataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgcctctgtgatgttgtgggagtttgctagcatttttttggttgctgc 25583122  T
Q  271 tgaaattgttatgtgatga 289  Q
    |||||||||||||||||||    
T  25583123 tgaaattgttatgtgatga 25583141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 3850702 - 3850646
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgag 206  Q
    ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||    
T  3850702 cttggttgtgatgtagttaattataacaattgagtaagtcatatgttgtactttgag 3850646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 30556011 - 30556066
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  30556011 caaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatggtgatttga 30556066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 36192171 - 36192116
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  36192171 caaatatcgtgagaattgccgttatttccagtatcacgtcaggtatggtgacttga 36192116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 39858730 - 39858675
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  39858730 caaatatcgtgaaaattgttgttatttccagtaccacgtcaggtatggtgacttga 39858675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 41545589 - 41545534
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  41545589 caaatatcgtgagaattatcgttatttccagtaccacgtcaggtatgatgacttga 41545534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 42646066 - 42646011
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  42646066 caaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatggtgatttga 42646011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 42736326 - 42736271
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  42736326 caaatatcatgagaattgtcgttatttccagtatcacgtcaggtatggtgacttga 42736271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 45408554 - 45408609
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  45408554 caaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatggtgatttga 45408609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 36192092 - 36191953
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||| | ||||| ||  |||||||||||||   |||||| |||||| |||  || ||| |||||| ||| |||    
T  36192092 cttggttgtgaggtagttaattataacaattaagtaagttatccgttgtactttgagggttgctagcaggtgtagcccctgcgatgttgtgggagtttgc 36191993  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       | |||||| |||||| ||||||||||||    
T  36191992 tagcatttttttgattgctgttgaaatggttatgtgatga 36191953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 638364 - 638419
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  638364 caaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 638419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 15882755 - 15882809
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  15882755 aaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 15882809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 6095546 - 6095493
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgactt 124  Q
    |||||||||||||||||| |||||||||||||||||||| | ||||| ||||||    
T  6095546 caaatatcgtgagaattgccgttatttccagtaccacgtcaagtatgatgactt 6095493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 289
Target Start/End: Complemental strand, 16096517 - 16096423
Alignment:
Q  195 ttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    ||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| ||||||||       ||||||||||||||| |||| |||||||    
T  16096517 ttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgctagcatttttttggttgctgctgaaatggttaagtgatga 16096423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 277485 - 277430
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||| ||| ||||||||    
T  277485 caaatatcgtgagaattgccgttatttccagtacaacgtcaggcatgatgacttga 277430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 824170 - 824225
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||| ||| ||||||||    
T  824170 caaatatcgtgagaattgccgttatttccagtacaacgtcaggcatgatgacttga 824225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 27913145 - 27913090
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||| |||||||||||||||||| |||| |||| ||||||| ||||||||    
T  27913145 caaatatcgttagaattgtcgttatttccggtacaacgtcaggtatgatgacttga 27913090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 27959564 - 27959509
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||| |||||||||||||||||| |||| |||| ||||||| ||||||||    
T  27959564 caaatatcgttagaattgtcgttatttccggtacaacgtcaggtatgatgacttga 27959509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 38060561 - 38060616
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||||    
T  38060561 caaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 38060616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 30111473 - 30111419
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||| ||| ||||||| ||||||  ||||||||    
T  30111473 aaatatcgtgagaattgtcgttattttcagaaccacgtcaggtattatgacttga 30111419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 109
Target Start/End: Original strand, 40303693 - 40303731
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgt 109  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  40303693 caaatatcgtgaaaattgtcgttatttccagtaccacgt 40303731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 182
Target Start/End: Original strand, 26950212 - 26950244
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattga 182  Q
    |||||||||||||||||||||||||||||||||    
T  26950212 cttggttgtgaggtagttaattataacaattga 26950244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 41545528 - 41545488
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtca 190  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  41545528 cttggttgcgaggtagttaattataacaattgagtaagtca 41545488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 4622158 - 4622205
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttg 197  Q
    ||||||||||||||| ||||||||||||||||| ||| |||| |||||    
T  4622158 cttggttgtgaggtaattaattataacaattgagtaaatcatctgttg 4622205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 18956203 - 18956148
Alignment:
Q  71 caaatatcgtgagaattgtcgtta-tttccagtaccacgtaaggtatggtgacttg 125  Q
    |||||||||||||||||||||||| |||||||||| |||| | ||||| |||||||    
T  18956203 caaatatcgtgagaattgtcgttattttccagtacaacgtcaagtatgatgacttg 18956148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 2081610 - 2081651
Alignment:
Q  85 attgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||| |||| ||||||| ||||||||    
T  2081610 attgtcgttatttccagtacaacgtcaggtatgatgacttga 2081651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 3e-45; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 71 - 289
Target Start/End: Original strand, 23932892 - 23933110
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttgannnnnnnnnnnnnnnnnnnnnnncttggttgtgaggtagttaat 170  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||                       |||||||||||||||||||||    
T  23932892 caaatatcgtgagaattctcgttatttccagtaccacgtcaggtatggtgacttgatttttctttttgatttgatttttcttggttgtgaggtagttaat 23932991  T
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgc 270  Q
    |||||||||||| |||||||||||||||||||||||  ||||| | ||||||||||| ||||||||||||| ||||||||||||       |||||||||    
T  23932992 tataacaattgagtaagtcatgtgttgtactttgagggctgctggcaggtgttgccgctgtgattttgtgggagtctgctagcattttttcggttgctgc 23933091  T
Q  271 tgaaattgttatgtgatga 289  Q
    |||||||||||||||||||    
T  23933092 tgaaattgttatgtgatga 23933110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 71 - 289
Target Start/End: Complemental strand, 46718420 - 46718202
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttgannnnnnnnnnnnnnnnnnnnnnncttggttgtgaggtagttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                       |||||||||||||||||||||    
T  46718420 caaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctttttgatttgatttttcttggttgtgaggtagttaat 46718321  T
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgc 270  Q
    |||||||||||| ||||||||  |||||||||||||  ||| ||| |||||||| ||||||||| |||||| ||| ||||||||       |||||||||    
T  46718320 tataacaattgagtaagtcatccgttgtactttgagggctgatagcaggtgttgtcgttgtgatgttgtgggagtttgctagcatttttttggttgctgc 46718221  T
Q  271 tgaaattgttatgtgatga 289  Q
    |||||| ||||||||||||    
T  46718220 tgaaatggttatgtgatga 46718202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 34073653 - 34073514
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||| | |||||| |||||| ||| |||    
T  34073653 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgctgctgtgatgttgtgggagtttgc 34073554  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||        |||||||||||||| ||||||||||||    
T  34073553 tagcattttttttgttgctgctgaaatggttatgtgatga 34073514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 16665292 - 16665153
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  16665292 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 16665193  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  16665192 tagcatttttttggttgctgctgaaatggttatgtgatga 16665153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 23418718 - 23418857
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||| |||||||| ||||||||||| |||||| |||||| ||| |||    
T  23418718 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtttgc 23418817  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       |||||||| |||||| ||||||||||||    
T  23418818 tagcatttttttggttgctgttgaaatggttatgtgatga 23418857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 52448021 - 52447882
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  52448021 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 52447922  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  52447921 tagcatttttttggttgctgctgaaatggttatgtgatga 52447882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 41040960 - 41041099
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  41040960 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 41041059  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    || ||       ||||||||||||||| ||||||||||||    
T  41041060 taccatttttttggttgctgctgaaatggttatgtgatga 41041099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 31292108 - 31292208
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||   ||||||||||||||||||||||||| |||||| ||| |||    
T  31292108 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgagggttgctagtaggtgttgccgttgtgatgttgtgggagtttgc 31292207  T
Q  250 t 250  Q
    |    
T  31292208 t 31292208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 150 - 282
Target Start/End: Original strand, 13533983 - 13534115
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||  || |||| ||||||| ||| |||| | |||||| |||||||    
T  13533983 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagggcttctagcaggtgttaccgctgtgttgttgtgggagtctgc 13534082  T
Q  250 tagcannnnnnnggttgctgctgaaattgttat 282  Q
    |||||       ||||||||||||||| |||||    
T  13534083 tagcatatttttggttgctgctgaaatggttat 13534115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 30826918 - 30827057
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||  ||| |||    
T  30826918 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgtgagtttgc 30827017  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       |||||| |||||||| ||||||||||||    
T  30827018 tagcatttttttggttgcagctgaaatggttatgtgatga 30827057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 7487903 - 7487762
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttg--tactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtct 247  Q
    |||| |||||||||||||||||||||||||||| ||| |||| |||||  |||||||||  ||||||| |||||||||||||||||| |||||  ||| |    
T  7487903 cttgattgtgaggtagttaattataacaattgagtaaatcatctgttgtatactttgagggctgctagcaggtgttgccgttgtgatgttgtgagagttt 7487804  T
Q  248 gctagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||||       ||||||||||||||| ||||||||||||    
T  7487803 gctagcatttttttggttgctgctgaaatggttatgtgatga 7487762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 289
Target Start/End: Original strand, 3035230 - 3035367
Alignment:
Q  151 ttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgct 250  Q
    |||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  || |||| ||||||||||| |||||| |||||| ||| ||||    
T  3035230 ttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctactagcaggtgttgccgctgtgatgttgtgggagtttgct 3035329  T
Q  251 agcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    ||||       ||||||||||||||| ||||||||||||    
T  3035330 agca-ttttttggttgctgctgaaatggttatgtgatga 3035367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 17361734 - 17361595
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  || |||| ||||||||||| |||||| |||||| ||| |||    
T  17361734 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggcttctagcaggtgttgccgctgtgatgttgtgggagtttgc 17361635  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||        |||||||||||||| ||||| ||||||    
T  17361634 tagcatttttttagttgctgctgaaatggttatatgatga 17361595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 20786509 - 20786648
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||||||||||||||||| |||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  20786509 cttggttgtgaggtagttaattataaaaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatattgtgggagtttgc 20786608  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       || || ||||||||| ||||||||||||    
T  20786609 tagcatttttttggctggtgctgaaatggttatgtgatga 20786648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 54920031 - 54919893
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  54920031 cttggttgtgatgtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtggaagtttgc 54919932  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  54919931 tagca-ttttttggttgttgctgaaatggttatgtgatga 54919893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 50495679 - 50495778
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagc 253  Q
    ||||||||||||||||||||||||||||| ||||||||  |||||||||| || |||| ||| ||||||||||| |||||| |||||| ||| |||||||    
T  50495679 gttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttaaggactgttagcaggtgttgccgctgtgatgttgtgggagtttgctagc 50495778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 4653604 - 4653465
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||| ||  ||||||| | ||||| ||| |||||| |||||| ||| |||    
T  4653604 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttaagggctgctagcatgtgtttccgctgtgatgttgtgggagtttgc 4653505  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    || ||       ||||||||||||||| ||||||||||||    
T  4653504 tatcatttttttggttgctgctgaaatggttatgtgatga 4653465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 49874368 - 49874230
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||| |||||||||||| ||||||| ||||||||  |||||| |||||| |||||||| || || ||||| |||||| |||||| ||| |||    
T  49874368 cttggttgtgag-tagttaattatatcaattgagtaagtcatcagttgtattttgaggactgctagcagatgctgccgctgtgatgttgtgggagtttgc 49874270  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  49874269 tagcatttttttggttgctgctgaaatggttatgtgatga 49874230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 254
Target Start/End: Complemental strand, 35825168 - 35825063
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatg-tgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctg 248  Q
    ||||||||||| ||||||||||||||||||||| ||||||||  |  |||||||||||  ||||||| ||||||||||| |||||| |||||| ||||||    
T  35825168 cttggttgtgaagtagttaattataacaattgagtaagtcattataatgtactttgagtgctgctagcaggtgttgccgctgtgatgttgtgggagtctg 35825069  T
Q  249 ctagca 254  Q
    ||||||    
T  35825068 ctagca 35825063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 20342759 - 20342894
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagc 253  Q
    |||||||||||||||||||||| |||||| ||| ||||  |||||||||||||  ||||||| ||||||||  | |||||| |||||| ||| |||||||    
T  20342759 gttgtgaggtagttaattataaaaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgaagatgtgatgttgtgggagtttgctagc 20342858  T
Q  254 annnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |       ||||| ||||||||| ||||||||||||    
T  20342859 atttttttggttgttgctgaaatggttatgtgatga 20342894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 20353484 - 20353619
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagc 253  Q
    |||||||||||||||||||||| |||||| ||| ||||  |||||||||||||  ||||||| ||||||||  | |||||| |||||| ||| |||||||    
T  20353484 gttgtgaggtagttaattataaaaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgttgctgtgatgttgtgggagtttgctagc 20353583  T
Q  254 annnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |       ||||| ||||||||| ||||||||||||    
T  20353584 atttttttggttgttgctgaaatggttatgtgatga 20353619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 35045613 - 35045516
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtct 247  Q
    ||||||||||| |||||| |||||||||||||| |||||||| | ||||||||||||| ||| ||| ||||||||| | |||||| |||||| |||||    
T  35045613 cttggttgtgatgtagtttattataacaattgagtaagtcatattttgtactttgagagctgttagcaggtgttgctgctgtgatgttgtgggagtct 35045516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 49874447 - 49874394
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgactt 124  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  49874447 caaatatcatgagaattgtcgttatttccagtaccacgtcaggtatggtgactt 49874394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 13533904 - 13533959
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||    
T  13533904 caaatatcttgaaaattgtcgttatttccagtaccacgtcaggtatggtgacttga 13533959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 31292030 - 31292085
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||| |||||||||||||||||||||||||||| | ||||||||||||||    
T  31292030 caaatatcgtaagaattgtcgttatttccagtaccacgtcaagtatggtgacttga 31292085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 35045672 - 35045619
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  35045672 caaatatcgtgagaattgtcgttatttccagtac--cgtaaggtacggtgacttga 35045619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 16665371 - 16665316
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  16665371 caaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 16665316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 20342676 - 20342731
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||    
T  20342676 caaatatcgtgagaattgtcgttatttccagtacaacgtcgggtatgatgacttga 20342731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 20353401 - 20353456
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||    
T  20353401 caaatatcgtgagaattgtcgttatttccagtacaacgtcgggtatgatgacttga 20353456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 30826839 - 30826894
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||| ||||||||    
T  30826839 caaatatcgtgagaattgtcgttattttcagtacaacgtcaggtatgatgacttga 30826894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 34073714 - 34073659
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| |||| ||||    
T  34073714 caaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatagtgatttga 34073659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 35825247 - 35825192
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||| |||||| ||||||||||||||||||||| || |||||||||||||    
T  35825247 caaatatcgtaagaattatcgttatttccagtaccacgtcagatatggtgacttga 35825192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 41040881 - 41040936
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||| ||||||||    
T  41040881 caaatatcgtgagaattgtcgttattttcagtacaacgtcaggtatgatgacttga 41040936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 52448100 - 52448045
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  52448100 caaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 52448045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 20786430 - 20786485
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||| ||| ||||    
T  20786430 caaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgatttga 20786485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 27958824 - 27958879
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||| ||||||  ||||||||| |||||||||| ||||||||||||||||    
T  27958824 caaatatcgtcagaattaccgttatttctagtaccacgtcaggtatggtgacttga 27958879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 54920110 - 54920055
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||| |||||||||||||| |||| || |||| ||||||||    
T  54920110 caaatatcgtgagaattgttgttatttccagtacaacgtcagatatgatgacttga 54920055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 17361812 - 17361758
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||| |||||||||||||||| |||||| |||| ||||||| ||||||||    
T  17361812 aaatatcgttagaattgtcgttattttcagtacaacgtcaggtatgatgacttga 17361758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 188
Target Start/End: Original strand, 27958903 - 27958941
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagt 188  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  27958903 cttggttgtgaggtagttaattataacaattgagtaagt 27958941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 285
Target Start/End: Original strand, 27961891 - 27961993
Alignment:
Q  183 ataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgctgaaattgttat 282  Q
    |||||||||  |||||||||||||  ||||||  ||||||||||||||| || |||||| ||| ||||||||       ||||||| ||||||| |||||    
T  27961891 ataagtcatccgttgtactttgagggctgctaccaggtgttgccgttgtcatgttgtgggagtttgctagcatttttttggttgctactgaaatggttat 27961990  T
Q  283 gtg 285  Q
    |||    
T  27961991 gtg 27961993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 3035150 - 3035205
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||| |||||||||||||| |||||||||| || | ||||||| ||||||||    
T  3035150 caaatatcatgagaattgtcgttgtttccagtacaacatcaggtatgatgacttga 3035205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 23418639 - 23418694
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||  ||||||| |||||| |||| ||||||| ||||||||    
T  23418639 caaatatcgtgagaattgctgttattttcagtacaacgttaggtatgatgacttga 23418694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 50495596 - 50495651
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| | |||||||||| ||||||| | |||||| |||||||    
T  50495596 caaatatcgtgagaattgccattatttccagaaccacgtcaagtatggggacttga 50495651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 4653683 - 4653637
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatg 117  Q
    |||||||||||||||||| ||||||||||||||| |||| || ||||    
T  4653683 caaatatcgtgagaattgccgttatttccagtacaacgtcagatatg 4653637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 4653312 - 4653361
Alignment:
Q  75 tatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgactt 124  Q
    ||||||||||||||||||| |||| || ||||||| |||||| |||||||    
T  4653312 tatcgtgagaattgtcgttgtttctagaaccacgttaggtatcgtgactt 4653361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 2e-40; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 289
Target Start/End: Original strand, 2291628 - 2291846
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttgannnnnnnnnnnnnnnnnnnnnnncttggttgtgaggtagttaat 170  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||                       ||||||||||| |||||||||    
T  2291628 caaatatcttgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttcttttcgatttgatttttcttggttgtgaagtagttaat 2291727  T
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgc 270  Q
    |||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| |||||| |||||| ||||||||||||       |||||||||    
T  2291728 tataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtctgctagcatttttttggttgctgc 2291827  T
Q  271 tgaaattgttatgtgatga 289  Q
    |||||| ||||||||||||    
T  2291828 tgaaatggttatgtgatga 2291846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 38281666 - 38281805
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  38281666 cttggttgtgaggtagttaattataacaattgagtaaatcatatgttgtactttgagggctgctagcaggtgttgccgctgtgatattgtgggagtttgc 38281765  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  38281766 tagcatttttttggttgctgctgaaatggttatgtgatga 38281805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 150 - 287
Target Start/End: Original strand, 39068416 - 39068554
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||| | |||||||||||||||||| |||| ||||| |    
T  39068416 cttggttgtgaggtagttaattataacaattgagtaagtcatgtgttgtactttgagggctgctagcatgtgttgccgttgtgatttcgtgggagtcttc 39068515  T
Q  250 tagca-nnnnnnnggttgctgctgaaattgttatgtgat 287  Q
    |||||        ||||| ||||||||||||||||||||    
T  39068516 tagcattttttttggttgttgctgaaattgttatgtgat 39068554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 39774574 - 39774677
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||| |||||||||||||||||||| |||||||| |||||||||||||| |||| ||| ||||||||||| |||||| |||||| ||| |||    
T  39774574 cttggttgtgagttagttaattataacaattgagtaagtcatctgttgtactttgaggactgttagcaggtgttgccgctgtgatgttgtgggagtttgc 39774673  T
Q  250 tagc 253  Q
    ||||    
T  39774674 tagc 39774677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 1054550 - 1054689
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||| ||||||  ||||||| || |||||||| |||||| |||||| ||| |||    
T  1054550 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtattttgagggctgctagcagatgttgccgctgtgatgttgtgggagtttgc 1054649  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||| ||||||    
T  1054650 tagcatttatttggttgctgctgaaatggttatttgatga 1054689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 3906309 - 3906448
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  3906309 cttggttatgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 3906408  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    || ||       ||||||||||||||| ||||||||||||    
T  3906409 taccatttttttggttgctgctgaaatggttatgtgatga 3906448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 39966564 - 39966703
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||  |||||| |||||| ||| |||    
T  39966564 cttggttgtgaggtagttaattataacaattgagtaaatcattcgttgtactttgagggctgctagcaggtgttgccactgtgatgttgtgggagtttgc 39966663  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
     ||||       ||||||||||||||| ||||||||||||    
T  39966664 cagcatttttttggttgctgctgaaatggttatgtgatga 39966703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 287
Target Start/End: Original strand, 77035 - 77172
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||| |||||||||||||||||||||||| ||| |||| ||||||||||||||  |||||||||| |||||||| |||||| |||||| |||  ||    
T  77035 cttggttgcgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagtagttgttgccgctgtgatattgtgggagttcgc 77134  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgat 287  Q
    |||||        |||||||||||||| ||||||||||    
T  77135 tagcattttttttgttgctgctgaaatggttatgtgat 77172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 27551009 - 27551109
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagc 253  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||||  |||| ||| |||||||||||||||||| |||||| ||| |||||||    
T  27551009 gttgtgatgtagttaattataacaattgagtaagtcatctgttgtactttgaagactgttagcaggtgttgccgttgtgatgttgtgggagtttgctagc 27551108  T
Q  254 a 254  Q
    |    
T  27551109 a 27551109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 71 - 247
Target Start/End: Complemental strand, 15399694 - 15399518
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttgannnnnnnnnnnnnnnnnnnnnnncttggttgtgaggtagttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                       ||||||||||| ||| |||||    
T  15399694 caaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctttttgatttgatttttcttggttgtgatgtatttaat 15399595  T
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtct 247  Q
    |||||||||||| |||||||| ||||||||||||||   |||||| ||||||||||| |||||| |||||| |||||    
T  15399594 tataacaattgagtaagtcatctgttgtactttgagggttgctagcaggtgttgccgctgtgatgttgtgggagtct 15399518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 3851205 - 3851307
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||| ||||||||||||||||| ||||||||  ||||||||||||| |||| ||| ||||||||||| |||||| |||||| ||| |||    
T  3851205 cttggttgtgaggtaattaattataacaattgagtaagtcatccgttgtactttgaggactgttagcaggtgttgccgctgtgatgttgtgggagtttgc 3851304  T
Q  250 tag 252  Q
    |||    
T  3851305 tag 3851307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 3754345 - 3754448
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||  |||  ||||||||||| ||||| |||||| ||| |||    
T  3754345 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgaggactattagccggtgttgccgtggtgatgttgtgggagtttgc 3754444  T
Q  250 tagc 253  Q
    ||||    
T  3754445 tagc 3754448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 4737645 - 4737784
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||| ||||||  ||||||| || ||||| || |||||| |||||  ||| |||    
T  4737645 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtattttgagggctgctagcagatgttgtcgctgtgatgttgtgagagtttgc 4737744  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||| ||||||||||| ||||||||||||    
T  4737745 tagcatttttttggtagctgctgaaatggttatgtgatga 4737784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 37724910 - 37725049
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||| |||||||||||||||||||||| |||| ||| |||| ||||||||||| ||   |||||| ||||||||||| | |||| |||||| ||| |||    
T  37724910 cttggctgtgaggtagttaattataacagttgagtaaatcatctgttgtactttaagggttgctagcaggtgttgccgctatgatgttgtgggagtttgc 37725009  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  37725010 tagcatttttttggttgctgctgaaatggttatgtgatga 37725049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 42080275 - 42080378
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||   ||||| |||||| |||| ||| | ||||||||| |||||| |||||| ||| |||    
T  42080275 cttggttgtgaggtagttaattataacaattgagtaagtcattcattgtattttgaggactgttagcaagtgttgccgctgtgatgttgtgggagtttgc 42080374  T
Q  250 tagc 253  Q
    ||||    
T  42080375 tagc 42080378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 6645286 - 6645208
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgt 228  Q
    ||||||||||||||||||||||||||||||||| ||||||||   |||||||||||| ||| |||| ||||||||||||    
T  6645286 cttggttgtgaggtagttaattataacaattgagtaagtcatccattgtactttgaggactcctagaaggtgttgccgt 6645208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 15153190 - 15153051
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||| ||||||||||||||||||||||||| ||||| ||  ||||||| |||||   |||||| || |||||||| |||||| |||||| ||| |||    
T  15153190 cttggttatgaggtagttaattataacaattgagtaagttatccgttgtacattgagggttgctagcagatgttgccgctgtgatgttgtgggagtttgc 15153091  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  15153090 tagcatttttttggttgatgctgaaatggttatgtgatga 15153051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 1054471 - 1054526
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||||||||||    
T  1054471 caaatatgatgagaattgccgttatttccagtaccacgtaaggtatggtgacttga 1054526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 38281587 - 38281642
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  38281587 caaatatcgtgagaattgtcgttatttccagtacaacgtcaggtatgatgacttga 38281642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 4737566 - 4737621
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||||||||| || || ||||||||||||||||    
T  4737566 caaatatcgtgagaattgccgttatttccagtatcatgtcaggtatggtgacttga 4737621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 6645365 - 6645310
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||| ||||||||||||| |||| || ||||||||||||||||    
T  6645365 caaatatcgtgagaattatcgttatttccagaaccatgtcaggtatggtgacttga 6645310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 39774517 - 39774568
Alignment:
Q  75 tatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  39774517 tatcgtgagaattgtcgttatttccagaaccacgtcaagtatggtgacttga 39774568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 3754266 - 3754321
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||| ||||||||| |||||||||||| ||||||| | ||||||||||||||    
T  3754266 caaatatcatgagaattgccgttatttccagaaccacgtcaagtatggtgacttga 3754321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 3851126 - 3851181
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||| ||||||||||||| |||||||||||| ||||||| | ||||||||||||||    
T  3851126 caaaaatcgtgagaattgccgttatttccagaaccacgtcaagtatggtgacttga 3851181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 3906230 - 3906285
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||||    
T  3906230 caaatatcgtgagaattgccgttattttcagtacaacgttaggtatgatgacttga 3906285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 37724831 - 37724886
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||| ||||||||||||||||||||||||| |||| | ||||| ||||||||    
T  37724831 caaatatcatgagaattgtcgttatttccagtacaacgtcaagtatgatgacttga 37724886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 39068335 - 39068371
Alignment:
Q  73 aatatcgtgagaattgtcgttatttccagtaccacgt 109  Q
    |||||||||||||||||||||||||||||||| ||||    
T  39068335 aatatcgtgagaattgtcgttatttccagtactacgt 39068371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 76956 - 77011
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||| ||||| || | ||||||| ||||||||    
T  76956 caaatatcgtgagaattgccgttatttcgagtacaacatcaggtatgatgacttga 77011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 39966485 - 39966518
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtac 104  Q
    |||||||||||||||||| |||||||||||||||    
T  39966485 caaatatcgtgagaattgccgttatttccagtac 39966518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 289
Target Start/End: Complemental strand, 38697570 - 38697354
Alignment:
Q  73 aatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttgannnnnnnnnnnnnnnnnnnnnnncttggttgtgaggtagttaatta 172  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||                       |||||||||||||||||||||||    
T  38697570 aatatcgtgagaattgtcgttatttccagtaccatgtcaggtatggtgacttgatttttctttttgatttgatttttcttggttgtgaggtagttaatta 38697471  T
Q  173 taacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgctg 272  Q
    |||||||||| |||||||| ||||||||||||||  ||||||| ||||||||||| |||||| |||||| ||||||||||||       |||||||||||    
T  38697470 taacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtctgctagcatttttttggttgctgctg 38697371  T
Q  273 aaattgttatgtgatga 289  Q
    |||| ||||||||||||    
T  38697370 aaatggttatgtgatga 38697354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 3892086 - 3892222
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagc 253  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| |||||| |||||| ||| |||||||    
T  3892086 gttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtttgctagc 3892185  T
Q  254 a-nnnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |        ||||||||||||||||||||||||||||    
T  3892186 atttttttcggttgctgctgaaattgttatgtgatga 3892222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 23020436 - 23020297
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  23020436 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 23020337  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||||||||||||||||    
T  23020336 tagcatttttttggttgctgctgaaattgttatgtgatga 23020297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 45170645 - 45170506
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| |||||||||||||||||| |||||| ||| |||    
T  45170645 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgttgtgatgttgtgggagtttgc 45170546  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  45170545 tagcatttttttggttgctgctgaaatggttatgtgatga 45170506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 4232476 - 4232615
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||| | ||||||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  4232476 cttggttgtgaggtagttaattataacaattcagtaagtcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 4232575  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  4232576 tagcatttttttggttgctgctgaaatggttatgtgatga 4232615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 8851185 - 8851324
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  8851185 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 8851284  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  8851285 tagcatttttttggttgctgctgaaatggttatgtgatga 8851324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 11122251 - 11122112
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  11122251 cttggttgtgaggtagttaattataacaattgagtaaatcatcagttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 11122152  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  11122151 tagcatttttttggttgctgctgaaatggttatgtgatga 11122112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 55411853 - 55411762
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtgg 241  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||| |||||| ||||||    
T  55411853 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgctaccaggtgttgccgctgtgatattgtgg 55411762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 18410862 - 18410727
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagc 253  Q
    ||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||||||| ||||||||||| || ||| |||||| ||| |||||||    
T  18410862 gttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagcaggtgttgccgctgcgatgttgtgggagtttgctagc 18410763  T
Q  254 annnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |       ||||||||||||||| ||||||||||||    
T  18410762 atttttttggttgctgctgaaatggttatgtgatga 18410727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 40906787 - 40906648
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||| |||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| |||||||||||||||||| |||||| ||| |||    
T  40906787 cttggttgtgagatagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgttgtgatgttgtgggagtttgc 40906688  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  40906687 tagcatctttttggttgttgctgaaatggttatgtgatga 40906648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 41697494 - 41697633
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| |||||||| ||||||||| |||||| ||| |||    
T  41697494 cttggttgtgaggtagttaattataacaattgagtaaatcattcgttgtactttgagggctgctagcaggtgttgtcgttgtgatgttgtgggagtttgc 41697593  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||        |||||||||||||| ||||||||||||    
T  41697594 tagcatttttttagttgctgctgaaatggttatgtgatga 41697633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 43338998 - 43338859
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||   |||||||||||||||||| |||||| |||||| ||||| |    
T  43338998 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagggttgctagtaggtgttgccgctgtgatgttgtgggagtctac 43338899  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    || ||       | ||| ||||||||| ||||||||||||    
T  43338898 taacatttttttgattgatgctgaaatggttatgtgatga 43338859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 44842594 - 44842733
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  ||| |||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  44842594 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttatactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 44842693  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  44842694 tagcatttttttggttgctgctgaaatggttatgtgatga 44842733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 50547881 - 50548020
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| ||||||  || |||    
T  50547881 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggcgtttgc 50547980  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  50547981 tagcatttttttggttgctgctgaaatggttatgtgatga 50548020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 51722198 - 51722337
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||  ||||||| |||||||||||  ||||| |||||| |||||||    
T  51722198 cttggttgtgaagtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgcggtgatgttgtgggagtctgc 51722297  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    ||| |       ||||| ||||||||| ||||||||||||    
T  51722298 tagtatttttttggttgttgctgaaatggttatgtgatga 51722337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 289
Target Start/End: Complemental strand, 40424421 - 40424203
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttgannnnnnnnnnnnnnnnnnnnnnncttggttgtgaggtagttaat 170  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||                       ||||||||||| |||||||||    
T  40424421 caaatatcgtgagaattgtcgttattttcagtaccacgttaggtatggtgacttgatttttctttttgatttgatttttcttggttgtgaagtagttaat 40424322  T
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgc 270  Q
    |||||||||||| |||||||| ||||||| ||||||  ||| | | |||||||| || |||||| |||||| ||||||||||||       |||||||||    
T  40424321 tataacaattgagtaagtcatctgttgtaatttgagggctgatggcaggtgttgtcgctgtgatgttgtgggagtctgctagcatttttttggttgctgc 40424222  T
Q  271 tgaaattgttatgtgatga 289  Q
    |||||| ||||||||||||    
T  40424221 tgaaatggttatgtgatga 40424203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 10827123 - 10827213
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtg 240  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||||||| ||||||||||| |||||| |||||    
T  10827123 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtg 10827213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 22605520 - 22605381
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||   |||||| | ||||||||| |||||| |||||| ||| |||    
T  22605520 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggttgctagcatgtgttgccgctgtgatgttgtgggagtttgc 22605421  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       || |||||||||||| ||||||||||||    
T  22605420 tagcatttttttggctgctgctgaaatggttatgtgatga 22605381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 30439689 - 30439828
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||   |||||| ||||||||||| |||||| |||||| ||| |||    
T  30439689 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgaggcttgctagcaggtgttgccgatgtgatgttgtgggagtttgc 30439788  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  30439789 tagcatttttttggttgttgctgaaatggttatgtgatga 30439828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 45053117 - 45053256
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| |||||||| || |||||| |||||| ||| |||    
T  45053117 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgtcgctgtgatgttgtgggagtttgc 45053216  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  45053217 tagcatttttttggttgttgctgaaatggttatgtgatga 45053256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 50610089 - 50609950
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| | ||||||||| |||||| |||||| ||| |||    
T  50610089 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcatgtgttgccgctgtgatgttgtgggagtttgc 50609990  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
     ||||       ||||||||||||||| ||||||||||||    
T  50609989 cagcatttttttggttgctgctgaaatagttatgtgatga 50609950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 22428330 - 22428437
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtc---atgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtc 246  Q
    |||||||||||||||||||||||||||| |||||||||||   || |||||||||||||| |||||||| ||||||||||| |||||| |||||| |||     
T  22428330 cttggttgtgaggtagttaattataacatttgaataagtcgtcatttgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtt 22428429  T
Q  247 tgctagca 254  Q
    ||||||||    
T  22428430 tgctagca 22428437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 254
Target Start/End: Complemental strand, 42826631 - 42826527
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||||||| ||| |||||| | ||||||||||| |||||| |||||| ||| |||    
T  42826631 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtacttcgaggactgcttgcaggtgttgccgctgtgatgttgtgggagtttgc 42826532  T
Q  250 tagca 254  Q
    |||||    
T  42826531 tagca 42826527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 53777760 - 53777851
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtgg 241  Q
    ||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||||| | ||||||||| |||||| ||||||    
T  53777760 cttggttgtgaagtagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagcaagtgttgccgctgtgatgttgtgg 53777851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 37786083 - 37785944
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||||||||||| |||||||||||| ||| |||| |||| |||||| ||  ||||||| || |||||||| |||||| |||||| ||| |||    
T  37786083 cttggttgtgaggtagttaagtataacaattgagtaaatcatctgttatactttaagggctgctagcagatgttgccgctgtgatattgtgggagtttgc 37785984  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  37785983 tagcatttttttggttgctgctgaaatggttatgtgatga 37785944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 41102322 - 41102183
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| | ||||||||| ||   |||||| ||||||||||| |||||| |||||| ||| ||     
T  41102322 cttggttgtgaggtagttaattataacaattgagtaaatcatctattgtactttcagggatgctagcaggtgttgccgctgtgatgttgtgggagtttga 41102223  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  41102222 tagcatttttttggttgctgctgaaatggttatgtgatga 41102183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 47912340 - 47912479
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||| |||||| ||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||| ||| |||||| |||||| ||| |||    
T  47912340 cttggttgtgagatagttacttataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttaccgctgtgatgttgtgggagtttgc 47912439  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  47912440 tagcatttttttggttgctgctgaaatggttatgtgatga 47912479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 6175057 - 6175154
Alignment:
Q  157 gtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagca 254  Q
    |||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| |||||||||||||||||| |||||| ||| ||||||||    
T  6175057 gtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgttgtgatgttgtgggagtttgctagca 6175154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 292
Target Start/End: Original strand, 30363081 - 30363223
Alignment:
Q  151 ttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgct 250  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||| || | ||||||| | |||||| |||||| ||| ||||    
T  30363081 ttggttgtgaggtagttaattataacaactgagtaagtcatctgttgtactttgaggactgcgagcaagtgttgctgctgtgatgttgtgggagtttgct 30363180  T
Q  251 agca-nnnnnnnggttgctgctgaaattgttatgtgatgatgc 292  Q
    ||||        ||||||||||||| | |||||||||||||||    
T  30363181 agcattttttttggttgctgctgaagtggttatgtgatgatgc 30363223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 27325084 - 27325188
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||| ||||||| ||| |||| ||||||||||||||  ||||| | || ||||||||||||||| |||||| ||| |||    
T  27325084 cttggttgtgaggtagttaattatatcaattgagtaaatcatttgttgtactttgagggctgctggcagttgttgccgttgtgatgttgtgggagtttgc 27325183  T
Q  250 tagca 254  Q
    |||||    
T  27325184 tagca 27325188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 27331321 - 27331425
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||| ||||||| ||| |||| ||||||||||||||  ||||| | || ||||||||||||||| |||||| ||| |||    
T  27331321 cttggttgtgaggtagttaattatatcaattgagtaaatcatttgttgtactttgagggctgctggcagttgttgccgttgtgatgttgtgggagtttgc 27331420  T
Q  250 tagca 254  Q
    |||||    
T  27331421 tagca 27331425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 37219600 - 37219704
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||| ||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  37219600 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtaatttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 37219699  T
Q  250 tagca 254  Q
    |||||    
T  37219700 tagca 37219704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 286
Target Start/End: Original strand, 30042889 - 30043025
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||||||||||||||||| |||||| ||| ||||  ||||| |||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  30042889 cttggttgtgaggtagttaattataaaaattgagtaaatcatccgttgtgctttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 30042988  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtga 286  Q
    |||||       ||||| ||||||||| |||||||||    
T  30042989 tagcatttttttggttgttgctgaaatggttatgtga 30043025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 2218640 - 2218501
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||| |||||||||||||||||||||||||||| ||| ||||   ||||||||||||  ||||||| ||||||||||| | |||| |||||| ||| |||    
T  2218640 cttgattgtgaggtagttaattataacaattgagtaaatcattcattgtactttgagggctgctagcaggtgttgccgctctgatgttgtgggagtttgc 2218541  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    || ||       ||||||||||||||| ||||||||||||    
T  2218540 taccattcttttggttgctgctgaaatggttatgtgatga 2218501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 16464568 - 16464429
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||| | ||| ||||  |||||||||||||  ||||||| | ||||||||| |||||| |||||| ||| | |    
T  16464568 cttggttgtgaggtagttaattataacaattaagtaaatcatccgttgtactttgagggctgctagcatgtgttgccgctgtgatgttgtgggagtttcc 16464469  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    || ||       ||||||||||||||| ||||||||||||    
T  16464468 taccatttttttggttgctgctgaaatggttatgtgatga 16464429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 31313020 - 31313117
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtct 247  Q
    ||||||||| | ||||||||||||||||||||| |||||||| ||||||||||||||   |||||| ||||||||||| |||||| |||||| |||||    
T  31313020 cttggttgtaatgtagttaattataacaattgagtaagtcatctgttgtactttgagggttgctagcaggtgttgccgctgtgatgttgtgggagtct 31313117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 38236159 - 38236062
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtct 247  Q
    ||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||||  ||| ||| ||||||||||| |||||| |||||| |||||    
T  38236159 cttggttgtgatgtagttaattataacaattaagtaagtcatctgttgtactttgagggctgttagcaggtgttgccgctgtgatgttgtgggagtct 38236062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 254
Target Start/End: Complemental strand, 27126827 - 27126723
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| || |||||||| |||||| |||||  ||| |||    
T  27126827 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcagatgttgccgctgtgatgttgtgagagtttgc 27126728  T
Q  250 tagca 254  Q
    |||||    
T  27126727 tagca 27126723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 16009438 - 16009347
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtgg 241  Q
    ||||||||||||||||||||||||||||||||| |||  |||   ||||||||||||  ||||||| ||||||||||| |||||| ||||||    
T  16009438 cttggttgtgaggtagttaattataacaattgagtaaaacatccattgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgg 16009347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 31312959 - 31313014
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  31312959 caaatatcgtgagaattgtcgttatttccagtatcacgtcaggtatggtgacttga 31313014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 51722137 - 51722192
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51722137 caaatgtcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttga 51722192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 30362931 - 30362986
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  30362931 caaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatggtgatttga 30362986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 37181323 - 37181378
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  37181323 caaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatggtgatttga 37181378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 43339077 - 43339022
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  43339077 caaatatcgtgagaattgtcgttattatcagtaccacgtcaggtatggtgacttga 43339022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 55411932 - 55411877
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  55411932 caaatatcgtgagaattgtcgttatttccagaaccacgtcaggtacggtgacttga 55411877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 13214090 - 13213972
Alignment:
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgc 270  Q
    |||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||  |||||| |||||| ||| ||||||||       |||||||||    
T  13214090 tataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgcctctgtgatgttgtgggagtttgctagcatttttttggttgctgc 13213991  T
Q  271 tgaaattgttatgtgatga 289  Q
    |||||| ||||||| ||||    
T  13213990 tgaaatggttatgtaatga 13213972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 4232397 - 4232452
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||    
T  4232397 caaatatcgtgagaattgttgttatttccagtacaacgtcaggtatgatgacttga 4232452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 10827062 - 10827117
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||  ||||||| | ||||||||||||||    
T  10827062 caaatatcgtgagaattgtcgttatttccataaccacgtcaagtatggtgacttga 10827117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 18410945 - 18410890
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||||| |||| | ||||| ||||||||    
T  18410945 caaatatcgtgagaattgtcgttatttccagtacaacgtcatgtatgatgacttga 18410890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 27126906 - 27126851
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  27126906 caaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 27126851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 27325005 - 27325060
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||    
T  27325005 caaatatcgtgagaattgttgttatttccagtacaacgtcaggtatgatgacttga 27325060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 27331242 - 27331297
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||    
T  27331242 caaatatcgtgagaattgttgttatttccagtacaacgtcaggtatgatgacttga 27331297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 37219521 - 37219576
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  37219521 caaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 37219576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 40906866 - 40906811
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||| ||||||||    
T  40906866 caaatatcgtgagaattgtcgttattttcagtacaacgtcaggtatgatgacttga 40906811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 41697415 - 41697470
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  41697415 caaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 41697470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 47912279 - 47912334
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  47912279 caaatattgtgagaattgtcgttatttccagtacaacgtcaggtatgatgacttga 47912334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 37181406 - 37181456
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttg 204  Q
    ||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  37181406 gttgtgaggtagttaattataacaattgagtgagtcatctgttgtactttg 37181456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 53777700 - 53777754
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||| |||||||||||  ||||||| ||||||||||||||||    
T  53777700 aaatatcgtgagaattgccgttatttccataaccacgtcaggtatggtgacttga 53777754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 2218719 - 2218664
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||||    
T  2218719 caaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 2218664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 3892003 - 3892058
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||| ||||| ||||||||||||||||||||| | ||||||||| ||||    
T  3892003 caaatatcgtgtgaattttcgttatttccagtaccacgtcaagtatggtgatttga 3892058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 16464647 - 16464592
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||||    
T  16464647 caaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 16464592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 18762652 - 18762597
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||||| || | ||| ||||||||||    
T  18762652 caaatatcgtgagaattgccgttatttccagtaccatgttatgtacggtgacttga 18762597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 22428251 - 22428306
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||| |||||||||| || |||| || ||||||||||||||||    
T  22428251 caaatatcgtgagaattatcgttatttcgagaaccatgtcaggtatggtgacttga 22428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 22605599 - 22605544
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||  |||||||||||||| |||| ||||||| ||||||||    
T  22605599 caaatatcgtgagaattgcagttatttccagtacaacgtcaggtatgatgacttga 22605544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 23020515 - 23020460
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||  ||| |||| ||||||| ||||||||    
T  23020515 caaatatcgtgagaattgtcgttatttcctatacaacgtcaggtatgttgacttga 23020460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 30042810 - 30042865
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||||    
T  30042810 caaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 30042865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 42826707 - 42826652
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||| ||||||||||  |||||||||||||||| || ||||||||||||||||    
T  42826707 caaatattgtgagaattgctgttatttccagtaccatgtcaggtatggtgacttga 42826652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 45053038 - 45053093
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||| ||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  45053038 caaatatcgttagaattgccgttatttccagtacaacgtcaggtatgatgacttga 45053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 50547802 - 50547857
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||||| |  | ||||||| ||||||||    
T  50547802 caaatatcgtgagaattgtcgttatttccagtacaatatcaggtatgatgacttga 50547857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 16009516 - 16009462
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||| ||||| |||| ||||||| ||||||||    
T  16009516 aaatatcgtgagaattgttgttatttctagtacaacgtcaggtatgatgacttga 16009462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 37786161 - 37786107
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||  |||||||||||||| |||| ||||||| ||||||||    
T  37786161 aaatatcgtgagaattgctgttatttccagtacaacgtcaggtatgatgacttga 37786107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 8851106 - 8851161
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||| |||||||||||||||||| |||| | || ||||||| ||||||||    
T  8851106 caaatatcgttagaattgtcgttatttccggtacaatgtcaggtatgatgacttga 8851161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 30439610 - 30439665
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||| | ||||||||||||||||||||| |||| |||| || ||||||||    
T  30439610 caaatatcgtaaaaattgtcgttatttccagtacaacgtcaggtctgatgacttga 30439665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 38236238 - 38236183
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||| ||||||||||| ||||||||| |||||| | | ||||||||||||||    
T  38236238 caaatatcttgagaattgtcattatttccaataccacatcaagtatggtgacttga 38236183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 41102401 - 41102346
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||| |||||| || | ||||||| ||||||||    
T  41102401 caaatatcgtgagaattgccgttattttcagtacaacatcaggtatgatgacttga 41102346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 180
Target Start/End: Complemental strand, 18762571 - 18762542
Alignment:
Q  151 ttggttgtgaggtagttaattataacaatt 180  Q
    ||||||||||||||||||||||||||||||    
T  18762571 ttggttgtgaggtagttaattataacaatt 18762542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 30363017 - 30363053
Alignment:
Q  155 ttgtgaggtagttaattataacaattgaataagtcat 191  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  30363017 ttgtgaggtagttaattataacaactgagtaagtcat 30363053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 1e-38; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 71 - 286
Target Start/End: Original strand, 48606906 - 48607121
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttgannnnnnnnnnnnnnnnnnnnnnncttggttgtgaggtagttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                       |||||||||||||||||||||    
T  48606906 caaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctttttgatttgatttttcttggttgtgaggtagttaat 48607005  T
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgc 270  Q
    ||| |||||||| |||||||| ||||||||||||||  ||||||| |||||||||||||||||| |||||| ||||||||||||       ||| |||||    
T  48607006 tatgacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgttgtgatgttgtgggagtctgctagcatttttttggtggctgc 48607105  T
Q  271 tgaaattgttatgtga 286  Q
    |||||| |||||||||    
T  48607106 tgaaatggttatgtga 48607121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 289
Target Start/End: Original strand, 30759450 - 30759589
Alignment:
Q  151 ttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgct 250  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| |||||| |||||| ||| ||||    
T  30759450 ttggttgtgaggtagttaattataacaattgagtaagtcatttgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtttgct 30759549  T
Q  251 agca-nnnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    ||||        ||||||||||||||| ||||||||||||    
T  30759550 agcatttttttcggttgctgctgaaatggttatgtgatga 30759589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 47504245 - 47504110
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagc 253  Q
    ||||||||||||||||||||||||||||| |||||||| | |||||||||||| |||||||| ||||||||||| |||||| |||||| ||| |||||||    
T  47504245 gttgtgaggtagttaattataacaattgagtaagtcatctattgtactttgaggactgctaggaggtgttgccgctgtgatgttgtgggagtttgctagc 47504146  T
Q  254 annnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |       ||||||||||||||| ||||||||||||    
T  47504145 attttttcggttgctgctgaaatggttatgtgatga 47504110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 150 - 288
Target Start/End: Complemental strand, 48683890 - 48683752
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  48683890 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 48683791  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatg 288  Q
    |||||       ||||||||||||||| |||||||||||    
T  48683790 tagcatttttttggttgctgctgaaatggttatgtgatg 48683752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 150 - 287
Target Start/End: Original strand, 5373905 - 5374042
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||| ||||||||||||||||||||||||||| |||||||| | ||||||||||||  ||||||| |||||||||||||||||| |||||| |||||||    
T  5373905 cttgggtgtgaggtagttaattataacaattgagtaagtcatctattgtactttgagggctgctagcaggtgttgccgttgtgatgttgtgggagtctgc 5374004  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgat 287  Q
    |||||       ||||| ||||||||| ||||||||||    
T  5374005 tagcatttttttggttgatgctgaaatggttatgtgat 5374042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 724887 - 725026
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||| |||||||| ||||||||||| |||||| |||||| ||| |||    
T  724887 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtttgc 724986  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       |||||||| |||||| ||||||||||||    
T  724987 tagcatttttttggttgctgttgaaatggttatgtgatga 725026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 44458657 - 44458796
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  44458657 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 44458756  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  44458757 tagcatttttttggttgctgctgaaatggttatgtgatga 44458796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 23593930 - 23594030
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagc 253  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||| |||||| |||||| ||| |||||||    
T  23593930 gttgtgaggtagttaattataacaattgaagaagtcatctgttgtactttgagtactgctagcaggtgttgccgctgtgatgttgtgggagtttgctagc 23594029  T
Q  254 a 254  Q
    |    
T  23594030 a 23594030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 3415507 - 3415646
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  3415507 cttggttgtgaggtacttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 3415606  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  3415607 tagcatttttttggttgctgctgaaatggttatgtgatga 3415646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 40015041 - 40015180
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| || ||||||||||||||| |||||| ||| |||    
T  40015041 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcagatgttgccgttgtgatgttgtgggagtttgc 40015140  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  40015141 tagcatttttttggttgttgctgaaatggttatgtgatga 40015180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 46554855 - 46554990
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagc 253  Q
    ||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||||||    
T  46554855 gttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgctagc 46554954  T
Q  254 annnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |       ||||||||||||||| ||||||||||||    
T  46554955 atttttttggttgctgctgaaatggttatgtgatga 46554990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 20120653 - 20120515
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||||||||||||||||| | |||||| |||||| ||| |||    
T  20120653 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagtaggtgttgctgctgtgatgttgtgggagtttgc 20120554  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       |||||||||||||||  |||||||||||    
T  20120553 tagca-ttttttggttgctgctgaaatgattatgtgatga 20120515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 41858007 - 41858111
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||||||||||||||||| | |||||| |||||| ||| |||    
T  41858007 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagtaggtgttgctgctgtgatgttgtgggagtttgc 41858106  T
Q  250 tagca 254  Q
    |||||    
T  41858107 tagca 41858111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 48951636 - 48951740
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||||||||||||||||| | |||||| |||||| ||| |||    
T  48951636 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagtaggtgttgctgctgtgatgttgtgggagtttgc 48951735  T
Q  250 tagca 254  Q
    |||||    
T  48951736 tagca 48951740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 150 - 282
Target Start/End: Original strand, 9662959 - 9663091
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||  || |||| ||||||| ||| |||| | |||||| |||||||    
T  9662959 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagggcttctagcaggtgttaccgctgtgttgttgtgggagtctgc 9663058  T
Q  250 tagcannnnnnnggttgctgctgaaattgttat 282  Q
    |||||       ||||||||||||||| |||||    
T  9663059 tagcatatttttggttgctgctgaaatggttat 9663091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 28588968 - 28589107
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||||||||||||||||||||| || ||| |||| |||| |||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  28588968 cttggttgtgaggtagttaattataacaatggagtaaatcatctgttctactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 28589067  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  28589068 tagcatttttttggttgttgctgaaatggttatgtgatga 28589107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 33245993 - 33246132
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||| ||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  33245993 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttcagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 33246092  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    || ||       ||||||||||||||| ||||||||||||    
T  33246093 taccatttttttggttgctgctgaaatggttatgtgatga 33246132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 17967679 - 17967766
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtgg 241  Q
    ||||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||||| ||||||||||| |||||| ||||||    
T  17967679 gttgtgaggtagttaattataacaattgagtaagtcatatgttgttctttgaggactgctagcaggtgttgccgctgtgatgttgtgg 17967766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 18994320 - 18994459
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| |||  |||   ||||||||||||  ||||||| |||||||||||||||||| ||||||  || |||    
T  18994320 cttggttgtgaggtagttaattataacaattgagtaaaccatccattgtactttgagggctgctagcaggtgttgccgttgtgatgttgtgggtgtttgc 18994419  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  18994420 tagcatttttttggttgttgctgaaatggttatgtgatga 18994459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 41336932 - 41336831
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  || |||| ||||||||||| |||||| |||||| ||| |||    
T  41336932 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggcttctagcaggtgttgccgctgtgatgttgtgggagtttgc 41336833  T
Q  250 ta 251  Q
    ||    
T  41336832 ta 41336831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 21730332 - 21730241
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtgg 241  Q
    ||||||||||| ||||||||||||||||||||| ||||||||  ||||||||||||| |||||||| | ||||||||| |||||| ||||||    
T  21730332 cttggttgtgaagtagttaattataacaattgagtaagtcatccgttgtactttgaggactgctagcaagtgttgccgctgtgatgttgtgg 21730241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 4925573 - 4925434
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||| ||||||||||||||||| ||  ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| ||     
T  4925573 cttggttgtgaggtaattaattataacaattgagtacatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttga 4925474  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  4925473 tagcatttttttggttgttgctgaaatggttatgtgatga 4925434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 21816030 - 21815891
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||| | ||| ||||  |||||||||||||  ||||||| | ||||||||| |||||| |||||| ||| | |    
T  21816030 cttggttgtgaggtagttaattataacaattaagtaaatcatccgttgtactttgagggctgctagcatgtgttgccgctgtgatgttgtgggagtttcc 21815931  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    || ||       ||||||||||||||| ||||||||||||    
T  21815930 taccatttttttggttgctgctgaaatggttatgtgatga 21815891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 44883372 - 44883233
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||||||||||||||||| |||||| ||| ||||  ||||| |||||||  ||||||| ||||||||||| | |||| |||||| ||| |||    
T  44883372 cttggttgtgaggtagttaattataaaaattgagtaaatcatccgttgtgctttgagggctgctagcaggtgttgccgctatgatgttgtgggagtttgc 44883273  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| ||||||||| ||||||||||||    
T  44883272 tagcatttttttggttgttgctgaaatggttatgtgatga 44883233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 46935631 - 46935735
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||||||||||||||||| |||||| ||||||||   |||||||||||| |||||||| | ||||||||| |||||| |||||| ||| ||     
T  46935631 cttggttgtgaggtagttaattataataattgagtaagtcatccattgtactttgaggactgctagcatgtgttgccgctgtgatgttgtgggagtttgt 46935730  T
Q  250 tagca 254  Q
    |||||    
T  46935731 tagca 46935735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 47908360 - 47908499
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||  ||||||| |||||||| || | |||| |||||| |||  ||    
T  47908360 cttggttgtgaggtagttaattataaaaattgagtaaatcatctgttgtactttgagggctgctagcaggtgttgtcgctatgatgttgtgggagttcgc 47908459  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| |||||||||  |||||||||||    
T  47908460 tagcatttttttggttgttgctgaaatgattatgtgatga 47908499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 16276924 - 16277015
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtgg 241  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   |||||||||||||  |||||| ||||||||||  |||||| ||||||    
T  16276924 cttggttgtgaggtagttaattataacaattgagtaaatcatccattgtactttgagagttgctagcaggtgttgccactgtgatgttgtgg 16277015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 21730410 - 21730358
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgactt 124  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  21730410 aaatatcgtgagaattgtcgttatttccagaaccacgtcaggtatggtgactt 21730358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 44522310 - 44522431
Alignment:
Q  168 aattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgc 267  Q
    ||||||||||||||| |||||||| ||||||||||||   |||||||  ||||||||||||| |||| |||||| ||| |||||||        ||||||    
T  44522310 aattataacaattgagtaagtcatctgttgtactttggagactgctaccaggtgttgccgttatgatgttgtgggagtttgctagctttttttcggttgc 44522409  T
Q  268 tgctgaaattgttatgtgatga 289  Q
    |||||| || ||||||||||||    
T  44522410 tgctgatatggttatgtgatga 44522431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 5373826 - 5373881
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  5373826 caaatatcgtgagaattttcgttattttcagtaccacgttaggtatggtgacttga 5373881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 9662880 - 9662935
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||    
T  9662880 caaatatcttgaaaattgtcgttatttccagtaccacgtcaggtatggtgacttga 9662935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 4925652 - 4925597
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||||| |||| || |||| ||||||||    
T  4925652 caaatatcgtgagaattgtcgttatttccagtacaacgtcagatatgatgacttga 4925597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 16276845 - 16276900
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||    
T  16276845 caaatatcgtgagaattgttgttatttccagtacaacgtcaggtatgatgacttga 16276900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 17967595 - 17967650
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||    
T  17967595 caaatatcgtgagaattgtcgttatttccagaaccacgttaagtatggtgatttga 17967650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 44458578 - 44458633
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  44458578 caaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 44458633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 44883451 - 44883396
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  44883451 caaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 44883396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 46935570 - 46935621
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgac 122  Q
    ||||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  46935570 caaatatcgtgagaattgtcgttatttccagaaccacgtcgggtatggtgac 46935621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 48683969 - 48683914
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||||| |||| | ||||| ||||||||    
T  48683969 caaatatcgtgagaattgtcgttatttccagtactacgtcatgtatgatgacttga 48683914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 44521366 - 44521420
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||    
T  44521366 aaatatcgtgagaattgtcgttattttcagtaccacgtcaagtatggtgatttga 44521420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 109
Target Start/End: Complemental strand, 47504329 - 47504291
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgt 109  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47504329 caaatatcgtgagaattgtcgttatttccagtaccacgt 47504291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 48951559 - 48951612
Alignment:
Q  73 aatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  48951559 aatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 48951612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 20120732 - 20120677
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||| |||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  20120732 caaatattgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 20120677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 21816109 - 21816054
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||||    
T  21816109 caaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 21816054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 33245914 - 33245969
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||||    
T  33245914 caaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 33245969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 41337011 - 41336956
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||| ||||||| ||||| |||| ||||||| ||||||||    
T  41337011 caaatatcgtgagaattgtctttatttctagtacaacgtcaggtatgatgacttga 41336956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 41857928 - 41857983
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||| |||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  41857928 caaatattgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 41857983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 46554772 - 46554827
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| | ||||| ||||||||    
T  46554772 caaatatcgtgagaattgccgttatttccagtacaacgtcatgtatgatgacttga 46554827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 47908281 - 47908336
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||  |||||||||||||| |||| ||||||| ||||||||    
T  47908281 caaatatcgtgagaattgcagttatttccagtacaacgtcaggtatgatgacttga 47908336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 724808 - 724863
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||  |||||||||||||| |||| ||||||| ||| ||||    
T  724808 caaatatcgtgagaattgctgttatttccagtacaacgttaggtatgatgatttga 724863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 18994241 - 18994296
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||| ||||||| |||||| |||| | ||||| ||||||||    
T  18994241 caaatatcgtgagaattgttgttattttcagtacaacgtcatgtatgatgacttga 18994296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 23593847 - 23593902
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||| ||||||| |||||||| | | ||||||||| ||||    
T  23593847 caaatatcgtgagaattgtcattatttctagtaccacatcaagtatggtgatttga 23593902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 30759370 - 30759425
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||| |||||| |||||||||||| |||||||||| | ||||||||| ||||    
T  30759370 caaatatcatgagaaatgtcgttatttctagtaccacgtcaagtatggtgatttga 30759425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 8392831 - 8392881
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtac 200  Q
    |||||||||||||||||||||| ||||||| || |||| ||| ||||||||    
T  8392831 cttggttgtgaggtagttaattctaacaatcgagtaaggcatctgttgtac 8392881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 109
Target Start/End: Original strand, 40014962 - 40015000
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgt 109  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  40014962 caaatatcgtgagaattgttgttatttccagtacaacgt 40015000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 6e-37; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 28579225 - 28579086
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||| ||||||||||| |||| | |||||| |||||||    
T  28579225 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgctgtgttgttgtgggagtctgc 28579126  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  28579125 tagcatatttttggttgctgctgaaatggttatgtgatga 28579086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 955041 - 955180
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||  ||| ||  |||||||||||||||||| |||||| ||| |||    
T  955041 cttggttgtgaggtagttaattataacaattgagtaagtcatccgttgtactttgagggctgataacaggtgttgccgttgtgatgttgtgggagtttgc 955140  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  955141 tagcatttctttggttgctgctgaaatggttatgtgatga 955180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 11154087 - 11154226
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||| ||||||||||||||||||||||||| ||||||||  ||||||||||||| |||||||| ||||||||||| |||||| |||||| ||| |||    
T  11154087 cttggttctgaggtagttaattataacaattgagtaagtcatccgttgtactttgaggactgctagcaggtgttgccgctgtgatgttgtgggagtttgc 11154186  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||| ||||    
T  11154187 tagcatttttttggttgctgctgaaatggttatgtaatga 11154226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 292
Target Start/End: Complemental strand, 23573684 - 23573543
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||| ||| |||||||||||||||||| |||||| ||| |||    
T  23573684 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgttagcaggtgttgccgttgtgatgttgtgggagtttgc 23573585  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatgatgc 292  Q
    |||||       ||||||||||||||| |||||||| ||||||    
T  23573584 tagca-ttttttggttgctgctgaaatggttatgtggtgatgc 23573543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 247
Target Start/End: Complemental strand, 25118958 - 25118782
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttgannnnnnnnnnnnnnnnnnnnnnncttggttgtgaggtagttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                       ||||||||||| |||||||||    
T  25118958 caaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctttttgatttgatttttcttggttgtgatgtagttaat 25118859  T
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtct 247  Q
    |||||||||||| |||||||| ||||||||||||||  ||||||| ||||||||||| |||||| |||||| |||||    
T  25118858 tataacaattgagtaagtcatctgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtct 25118782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 150 - 253
Target Start/End: Original strand, 21860795 - 21860898
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| ||||||||||  |||||| |||||| ||| |||    
T  21860795 cttgattgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgagaactgttagcaggtgttgcctctgtgatgttgtgggagtttgc 21860894  T
Q  250 tagc 253  Q
    ||||    
T  21860895 tagc 21860898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 254
Target Start/End: Complemental strand, 27783090 - 27782986
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  27783090 cttggttgtgaggtagttaattataacaattgagtaaatcattcgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtggaagtttgc 27782991  T
Q  250 tagca 254  Q
    |||||    
T  27782990 tagca 27782986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 11837051 - 11837186
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagc 253  Q
    ||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| ||||||  || ||||||     
T  11837051 gttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggtgtttgctaga 11837150  T
Q  254 annnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |       ||||||||||||||| ||||||||||||    
T  11837151 atttttttggttgctgctgaaatggttatgtgatga 11837186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 14104614 - 14104475
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||   |||||| ||||||||||| |||||| |||||| ||| |||    
T  14104614 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggttgctagcaggtgttgccgctgtgatgttgtgggagtttgc 14104515  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    | |||       ||||| ||||||||| ||||||||||||    
T  14104514 tcgcatttttttggttgttgctgaaatggttatgtgatga 14104475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 4589277 - 4589416
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||| |||||| || ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  4589277 cttggttgtgaggtagttaattaaaacaatcgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 4589376  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||| |||||||||  |||||||||||    
T  4589377 tagcatttttttggttgttgctgaaatgattatgtgatga 4589416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 27440519 - 27440445
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttg 224  Q
    ||||||||||||||||||||||||||||||||  ||| ||||  |||||||||||||  ||||||||||||||||    
T  27440519 cttggttgtgaggtagttaattataacaattgggtaaatcatccgttgtactttgagggctgctagtaggtgttg 27440445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 28579279 - 28579231
Alignment:
Q  78 cgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28579279 cgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttga 28579231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 11836967 - 11837022
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  11836967 caaatatcgtgagaattgtcgttatttccagtacaacgtcaggtatgatgacttga 11837022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 15288440 - 15288495
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  15288440 caaatatcgtgagaattgtcgttatttccagaaccacgtcaggtatgatgacttga 15288495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 4589216 - 4589271
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  4589216 caaatatcgtgagaattgccgttatttccagtacaacgtcaggtatgatgacttga 4589271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 11154009 - 11154063
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||| | |||||||||||||||| | ||||||||||||||||    
T  11154009 aaatatcgtgagaattgcctttatttccagtaccacatcaggtatggtgacttga 11154063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 954962 - 955017
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||  |||||||||| ||||||||| ||||||    
T  954962 caaatatcgtgagaattgccgttatttatagtaccacgtcaggtatggtaacttga 955017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 23573763 - 23573708
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||  ||||||||    
T  23573763 caaatatcgtgagaattgccgttatttccagtacaacgtcaggtataatgacttga 23573708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 24083804 - 24083749
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||| ||||||||||||||||||||||| ||||||| | |||||| |||||||    
T  24083804 caaatattgtgagaattgtcgttatttccagaaccacgtcaagtatggcgacttga 24083749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 27440598 - 27440543
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||| |||||||||||| ||||| |||| ||||||| ||||||||    
T  27440598 caaatatcgtgagaaatgtcgttatttctagtacaacgtcaggtatgatgacttga 27440543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 14104679 - 14104625
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||  |||||||||||||| |||| ||||||| ||||||||    
T  14104679 aaatatcgtgagaattgctgttatttccagtacaacgtcaggtatgatgacttga 14104625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 24083743 - 24083702
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcat 191  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  24083743 cttggttgtgaggtagttaattataataattgagtaagtcat 24083702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 15288501 - 15288565
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgcta 214  Q
    |||| |||||||||||||||||||||||||||| |||||| |  ||| ||||||||  |||||||    
T  15288501 cttgattgtgaggtagttaattataacaattgagtaagtcgtccgttttactttgaagactgcta 15288565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 9592424 - 9592285
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||||||| | |||||||||||||||| |||||| ||| |||    
T  9592424 cttggttgtgaggtagttaattataacaattgagtaaatcatctgttgtactttgagggctgctagcaagtgttgccgttgtgatgttgtgggagtttgc 9592325  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  9592324 tagcatttttttggttgctgctgaaatggttatgtgatga 9592285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 39589075 - 39588936
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| |||    
T  39589075 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgc 39588976  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  39588975 tagcatttttttggttgctgctgaaatggttatgtgatga 39588936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 292
Target Start/End: Complemental strand, 12500024 - 12499882
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||  ||||||| |||||||||||  ||||| |||||| ||| |||    
T  12500024 cttggttgtgaggtagttaattataacaattgactaaatcatatgttgtactttgagggctgctagcaggtgttgccgcagtgatgttgtgggagtttgc 12499925  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatgatgc 292  Q
    |||||        |||||||||||||| |||||||||||||||    
T  12499924 tagcattttttttgttgctgctgaaatggttatgtgatgatgc 12499882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 9986752 - 9986852
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagc 253  Q
    ||||||| | ||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||    
T  9986752 gttgtgatgcagttaattataacaattgagtaagtcatctgttgtactttgaggactgctagtaggtgttgccgttgtgatgttgtgggagtttgctagc 9986851  T
Q  254 a 254  Q
    |    
T  9986852 a 9986852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 30130345 - 30130484
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| ||||||  ||||| ||| |||    
T  30130345 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgctgtgggagtttgc 30130444  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  30130445 tagcatttttatggttgctgctgaaatggttatgtgatga 30130484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 289
Target Start/End: Original strand, 13304777 - 13304995
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttgannnnnnnnnnnnnnnnnnnnnnncttggttgtgaggtagttaat 170  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||                       |||||||||||||||||||||    
T  13304777 caaatatcgtgagaattgtcgttatttccagtaccacgtcaggtatggtgacttgatttttctttttgatttgatttttcttggttgtgaggtagttaat 13304876  T
Q  171 tataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagcannnnnnnggttgctgc 270  Q
    |||||||||||| |||||||| | ||||||||||||  ||||||| || |||||||| | || | |||||| |||| |||||||       ||||||||     
T  13304877 tataacaattgagtaagtcatctattgtactttgagggctgctagcagatgttgccgctttgttgttgtgggagtcagctagcatatttttggttgctgt 13304976  T
Q  271 tgaaattgttatgtgatga 289  Q
    |||||| ||||||||||||    
T  13304977 tgaaatggttatgtgatga 13304995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 31551555 - 31551659
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  |||||||| ||||||| ||| |||||| |||||| ||| |||    
T  31551555 cttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgatgactgctagcaggtgttcccgctgtgatgttgtgggagtttgc 31551654  T
Q  250 tagca 254  Q
    |||||    
T  31551655 tagca 31551659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 19665577 - 19665438
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||||||||||| |||||||||||| ||| |||| ||||||||||| ||  ||||||| | ||||||||| |||||| |||||| ||| |||    
T  19665577 cttggttgtgaggtagttaagtataacaattgagtaaatcatttgttgtactttaagggctgctagcaagtgttgccgctgtgatattgtgggagtttgc 19665478  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  19665477 tagcatttttttggttgctgctgaaatcgttatgtgatga 19665438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 27019522 - 27019661
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| ||     
T  27019522 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgt 27019621  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    || ||       ||||||||||||||| ||||||||||||    
T  27019622 taccatttttttggttgctgctgaaatggttatgtgatga 27019661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 42611654 - 42611793
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| ||||||  || |||    
T  42611654 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggtgtttgc 42611753  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    ||| |       ||||||||||||||| ||||||||||||    
T  42611754 tagtatttttttggttgctgctgaaatggttatgtgatga 42611793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 254
Target Start/End: Complemental strand, 37271032 - 37270928
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| |||||||| || |||||||||||  ||||||| |||| |||||| |||||| ||||||  ||||||    
T  37271032 cttggttgtgaggtagttaattataacaattgagtaagtcatctgctgtactttgagggctgctagcaggtattgccgctgtgatgttgtgggtgtctgc 37270933  T
Q  250 tagca 254  Q
    |||||    
T  37270932 tagca 37270928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 254
Target Start/End: Complemental strand, 27551399 - 27551296
Alignment:
Q  151 ttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgct 250  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| |||| || |||||||  |||||| |||||| ||| ||||    
T  27551399 ttggttgtgaggtagttaattataacaattgagtaagtcatctgttgtactttgaggacttctagcagatgttgccactgtgatgttgtgggagtttgct 27551300  T
Q  251 agca 254  Q
    ||||    
T  27551299 agca 27551296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 744994 - 745133
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||  |||||||||||||  ||| ||| ||||||||||| |||||| |||||| ||| |||    
T  744994 cttggttgtgaggtaattaattataacaattgagtaaatcatccgttgtactttgagggctgttagcaggtgttgccgctgtgatgttgtgggagtttgc 745093  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       || |||||||||||| ||||||||||||    
T  745094 tagcatttttttggctgctgctgaaatggttatgtgatga 745133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 15420967 - 15420828
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  || |||| || |||||||| |||||| |||||| ||| |||    
T  15420967 cttggttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctactagcagctgttgccgctgtgatgttgtgggagtttgc 15420868  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| |||||| |||||    
T  15420867 tagcatttttttggttgctgctgaaatggttatgcgatga 15420828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 824235 - 824373
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||  || |||||||||   ||||||| |||||||||||||||||| |||||| ||| |||    
T  824235 cttggttgtgatgtagttaattataacaattgagtaaatcatccgtcgtactttgaaggctgctagcaggtgttgccgttgtgatgttgtgggagtttgc 824334  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    |||||       ||||||||||||||| ||||||||||||    
T  824335 tagca-ttttttggttgctgctgaaatggttatgtgatga 824373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 11985263 - 11985175
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgt 239  Q
    ||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||||  ||||||| ||||||||||| |||||| ||||    
T  11985263 cttggttgtgatgtagttaattataacaattgagtaagtcatccgttgtactttgag-gctgctagcaggtgttgccgctgtgatgttgt 11985175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 37939895 - 37939982
Alignment:
Q  154 gttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtgg 241  Q
    ||||||||||||||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| ||| || ||||||    
T  37939895 gttgtgaggtagttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtaatgttgtgg 37939982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 11985342 - 11985287
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||||||||||||| | ||||||||||||||||    
T  11985342 caaatatcgtgagaattgccgttatttccagtaccacatcaggtatggtgacttga 11985287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 37271111 - 37271056
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||    
T  37271111 caaatatcgtgagaattatcgttatttccaataccacgtaaggtatggtaacttga 37271056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 20545581 - 20545719
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    |||||||||||||||||||||||||||||||| | || ||||  |||||||||||||  ||| ||| ||||||||||  | |||| |||||| ||| |||    
T  20545581 cttggttgtgaggtagttaattataacaattg-agaaatcatccgttgtactttgagggctgttagcaggtgttgccactatgatgttgtggcagtttgc 20545679  T
Q  250 tagcannnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    ||| |       ||||| ||||||||| ||||||||||||    
T  20545680 tagtatttttttggttgatgctgaaatggttatgtgatga 20545719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 9986668 - 9986723
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| |||| ||||    
T  9986668 caaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatagtgatttga 9986723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 15421046 - 15420991
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||||||| || | ||||||| ||||||||    
T  15421046 caaatatcgtgagaattgtcgttatttccagtacaacatcaggtatgatgacttga 15420991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 27551478 - 27551423
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||||| ||||    
T  27551478 caaatatcgtgagaattgtcgttatttccaataccacgtcaagtatggtgatttga 27551423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 9592502 - 9592448
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  9592502 aaatatcgtgagaattgacgttatttccagtacaacgtcaggtatgatgacttga 9592448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 744915 - 744970
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||| | ||||||||    
T  744915 caaatatcgtgagaattgccgttatttccagtacaacgtcaggtaagatgacttga 744970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 12500103 - 12500048
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| ||||||||| ||||| |||| ||||||| ||||||||    
T  12500103 caaatatcgtgagaattgccgttatttctagtacaacgtcaggtatgatgacttga 12500048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 20545520 - 20545575
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||  ||||||||||||||| |||| ||||||| ||||||||    
T  20545520 caaatatcgtgagaattaccgttatttccagtacaacgttaggtatgatgacttga 20545575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 27019443 - 27019498
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||||    
T  27019443 caaatatcgtgagaattgccgttattttcagtacaacgtcaggtatgatgacttga 27019498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 37939811 - 37939866
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||| |||||| | || ||||||| ||||||||    
T  37939811 caaatatcgtgagaattgtcgttattttcagtacaatgtcaggtatgatgacttga 37939866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 39589136 - 39589081
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||  ||||||||||||||| |||| ||||||| ||||||||    
T  39589136 caaatatcgtgagaattaccgttatttccagtacaacgtcaggtatgatgacttga 39589081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 42611575 - 42611630
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||  ||||||||||||||| |||| ||||||| ||||||||    
T  42611575 caaatatcgtgagaattaccgttatttccagtacaacgtcaggtatgatgacttga 42611630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 31551478 - 31551532
Alignment:
Q  72 aaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||| |||||| |||||||||| | ||||||||| ||||    
T  31551478 aaatatcgtgagaattgtcgctatttctagtaccacgtcaagtatggtgatttga 31551532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 19665656 - 19665601
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||  |||||||||||||| || | ||||||| ||||||||    
T  19665656 caaatatcgtgagaattgctgttatttccagtacaacttcaggtatgatgacttga 19665601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 5226 - 5303
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccg 227  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||| |||||||| |||||||||||    
T  5226 cttggttgtgaggtagttaattataacaattgagtaaatcatttgttgtactttgaggactgctagcaggtgttgccg 5303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 5147 - 5194
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatgg 118  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  5147 caaatatcgtgagaattgtcgttatttccagtaccacgtcaagtatgg 5194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 56867 - 56765
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgc 249  Q
    ||||||||||||||||||||||||||||||||| | ||||||  ||||||||||||  |||| ||| ||||||||||| |||||| |||||| ||| |||    
T  56867 cttggttgtgaggtagttaattataacaattgagtgagtcatccgttgtactttgaagactgttagcaggtgttgccgctgtgatgttgtgggagtttgc 56768  T
Q  250 tag 252  Q
    |||    
T  56767 tag 56765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 56951 - 56896
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||| ||||||||||||  ||||| | | ||||||||||||||    
T  56951 caaatatcgtgagaattttcgttatttccataaccacatcaagtatggtgacttga 56896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 289
Target Start/End: Original strand, 18704 - 18843
Alignment:
Q  151 ttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgct 250  Q
    |||||||||||||||||||||||||||||| | || ||||| | || ||||||||| |||||||| | ||||||||| |||||| |||||| ||| ||||    
T  18704 ttggttgtgaggtagttaattataacaattaagtatgtcatttattttactttgaggactgctagcaagtgttgccgctgtgatgttgtgggagtttgct 18803  T
Q  251 agca-nnnnnnnggttgctgctgaaattgttatgtgatga 289  Q
    | ||        ||||||| ||||||||||||||||||||    
T  18804 accatttttttcggttgctactgaaattgttatgtgatga 18843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 18637 - 18692
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||||||||||||||||||| ||||||  | ||||||||| ||||    
T  18637 caaatatcgtgagaattgtcgttatttccagcaccacgacaagtatggtgatttga 18692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 46842 - 46916
Alignment:
Q  150 cttggttgtgaggtagttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttg 224  Q
    ||||||||||||||||||||||||||||||||  ||| ||||  |||||||||||||  ||||||||||||||||    
T  46842 cttggttgtgaggtagttaattataacaattgggtaaatcatccgttgtactttgagggctgctagtaggtgttg 46916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 46763 - 46818
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    ||||||||||||||| |||||||||||| ||||| |||| ||||||| ||||||||    
T  46763 caaatatcgtgagaaatgtcgttatttctagtacaacgtcaggtatgatgacttga 46818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 21511 - 21423
Alignment:
Q  166 ttaattataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccgttgtgattttgtggtagtctgctagca 254  Q
    ||||||||||||||||| ||| ||||  |||||||||||||  ||||||| ||||||||||| |||||| |||||| ||| ||||||||    
T  21511 ttaattataacaattgagtaaatcatccgttgtactttgagggctgctagcaggtgttgccgctgtgatgttgtgggagtttgctagca 21423  T

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Target: scaffold0115; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 22689 - 22634
Alignment:
Q  71 caaatatcgtgagaattgtcgttatttccagtaccacgtaaggtatggtgacttga 126  Q
    |||||||||||||||||||||||||||||| ||| |||| | | ||| ||||||||    
T  22689 caaatatcgtgagaattgtcgttatttccaatacaacgtcaagaatgatgacttga 22634  T

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Target: scaffold0259 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 5497 - 5552
Alignment:
Q  172 ataacaattgaataagtcatgtgttgtactttgagaactgctagtaggtgttgccg 227  Q
    ||||||||||| ||||||||  ||||||||||||| |||| ||| |||||||||||    
T  5497 ataacaattgagtaagtcatccgttgtactttgaggactggtagcaggtgttgccg 5552  T

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