View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1871_low_21 (Length: 250)

Name: NF1871_low_21
Description: NF1871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1871_low_21
NF1871_low_21
[»] chr4 (34 HSPs)
chr4 (57-250)||(15734077-15734269)
chr4 (13-57)||(49923874-49923918)
chr4 (13-60)||(37560377-37560424)
chr4 (12-57)||(11113736-11113781)
chr4 (13-58)||(39590934-39590979)
chr4 (13-57)||(6616289-6616333)
chr4 (12-56)||(11115057-11115101)
chr4 (13-57)||(39592367-39592411)
chr4 (13-56)||(54372741-54372784)
chr4 (15-53)||(1273512-1273550)
chr4 (13-55)||(27408759-27408801)
chr4 (12-57)||(31711086-31711131)
chr4 (13-58)||(37642619-37642664)
chr4 (13-57)||(29688052-29688096)
chr4 (12-60)||(29833363-29833411)
chr4 (13-57)||(33376212-33376256)
chr4 (13-57)||(33377442-33377486)
chr4 (13-57)||(37558992-37559036)
chr4 (15-59)||(46796106-46796150)
chr4 (13-57)||(54374030-54374074)
chr4 (13-56)||(29686251-29686294)
chr4 (13-56)||(47668675-47668718)
chr4 (12-58)||(12396951-12396997)
chr4 (13-58)||(10403494-10403539)
chr4 (12-61)||(15446747-15446796)
chr4 (12-57)||(15786946-15786991)
chr4 (12-57)||(21104387-21104432)
chr4 (12-57)||(30672141-30672186)
chr4 (13-58)||(38371883-38371928)
chr4 (13-54)||(55953930-55953971)
chr4 (12-56)||(28103563-28103607)
chr4 (12-56)||(29834509-29834553)
chr4 (12-56)||(30670989-30671033)
chr4 (12-60)||(30682711-30682759)
[»] chr5 (27 HSPs)
chr5 (13-56)||(19523978-19524021)
chr5 (12-58)||(1273417-1273463)
chr5 (12-58)||(41905168-41905214)
chr5 (13-58)||(19525366-19525411)
chr5 (13-57)||(19825868-19825912)
chr5 (14-57)||(5382936-5382979)
chr5 (13-56)||(18677971-18678014)
chr5 (12-55)||(40059405-40059448)
chr5 (12-54)||(12933748-12933790)
chr5 (12-58)||(12936179-12936225)
chr5 (13-58)||(30912307-30912352)
chr5 (13-57)||(6629725-6629769)
chr5 (13-57)||(30916196-30916240)
chr5 (22-58)||(33362654-33362690)
chr5 (25-60)||(6629813-6629848)
chr5 (12-54)||(1273086-1273128)
chr5 (13-59)||(1663179-1663225)
chr5 (12-58)||(4568051-4568097)
chr5 (12-54)||(12947909-12947951)
chr5 (12-58)||(12950337-12950383)
chr5 (12-58)||(15510340-15510386)
chr5 (12-58)||(21389218-21389264)
chr5 (15-57)||(24805285-24805327)
chr5 (22-55)||(8762487-8762520)
chr5 (22-58)||(10085932-10085968)
chr5 (26-54)||(24805373-24805401)
chr5 (22-58)||(38394790-38394826)
[»] chr3 (33 HSPs)
chr3 (12-59)||(8372693-8372740)
chr3 (13-58)||(41387511-41387556)
chr3 (13-58)||(51825699-51825744)
chr3 (13-57)||(48338195-48338239)
chr3 (12-56)||(49122079-49122123)
chr3 (15-55)||(53808314-53808354)
chr3 (13-56)||(17350180-17350223)
chr3 (22-60)||(54752607-54752645)
chr3 (13-58)||(41386123-41386168)
chr3 (13-58)||(42633964-42634009)
chr3 (12-68)||(8371203-8371259)
chr3 (12-56)||(10987730-10987774)
chr3 (22-58)||(30838557-30838593)
chr3 (12-56)||(54654043-54654087)
chr3 (13-56)||(17345306-17345349)
chr3 (13-56)||(32980530-32980573)
chr3 (13-56)||(42632701-42632744)
chr3 (13-56)||(48336342-48336385)
chr3 (12-58)||(32973132-32973178)
chr3 (21-55)||(36626727-36626761)
chr3 (12-46)||(43101899-43101933)
chr3 (12-58)||(53047890-53047936)
chr3 (12-57)||(11483064-11483109)
chr3 (15-56)||(26798986-26799027)
chr3 (12-57)||(52292588-52292633)
chr3 (12-57)||(53809570-53809615)
chr3 (12-56)||(19579371-19579415)
chr3 (22-58)||(25585920-25585956)
chr3 (12-56)||(32974300-32974344)
chr3 (22-58)||(43103383-43103419)
chr3 (12-56)||(48035401-48035445)
chr3 (13-57)||(51400209-51400253)
chr3 (22-54)||(51824123-51824155)
[»] chr6 (13 HSPs)
chr6 (13-59)||(5311271-5311317)
chr6 (13-56)||(683618-683661)
chr6 (13-55)||(18139565-18139607)
chr6 (13-59)||(31738355-31738401)
chr6 (13-55)||(33802095-33802137)
chr6 (22-57)||(15435686-15435721)
chr6 (13-56)||(34084210-34084253)
chr6 (12-57)||(8447215-8447260)
chr6 (12-57)||(8456019-8456064)
chr6 (12-53)||(27438788-27438829)
chr6 (22-55)||(27440262-27440295)
chr6 (12-56)||(19368595-19368639)
chr6 (13-57)||(33807683-33807727)
[»] chr1 (24 HSPs)
chr1 (13-59)||(25787242-25787288)
chr1 (14-56)||(47411527-47411569)
chr1 (13-57)||(25785962-25786006)
chr1 (13-65)||(52439363-52439415)
chr1 (13-56)||(34653430-34653473)
chr1 (13-59)||(14071281-14071327)
chr1 (13-54)||(13929292-13929333)
chr1 (13-57)||(47560133-47560177)
chr1 (12-60)||(48935187-48935235)
chr1 (14-58)||(49139794-49139838)
chr1 (13-57)||(49619897-49619941)
chr1 (22-54)||(52741485-52741517)
chr1 (22-57)||(3978038-3978073)
chr1 (13-56)||(21276989-21277032)
chr1 (13-56)||(33793774-33793817)
chr1 (13-56)||(38451547-38451590)
chr1 (13-56)||(44977216-44977259)
chr1 (12-58)||(2236806-2236852)
chr1 (13-51)||(13930753-13930791)
chr1 (12-57)||(2238055-2238100)
chr1 (12-57)||(48974483-48974528)
chr1 (12-56)||(35683050-35683094)
chr1 (13-57)||(47136765-47136809)
chr1 (22-58)||(50678359-50678395)
[»] chr8 (28 HSPs)
chr8 (13-57)||(16363890-16363934)
chr8 (13-57)||(31623900-31623944)
chr8 (13-56)||(39544925-39544968)
chr8 (15-57)||(8395018-8395060)
chr8 (13-55)||(36940111-36940153)
chr8 (12-57)||(3237717-3237762)
chr8 (13-58)||(10053822-10053867)
chr8 (13-58)||(11081110-11081155)
chr8 (24-56)||(10052099-10052131)
chr8 (12-56)||(35943902-35943946)
chr8 (22-58)||(38589814-38589850)
chr8 (22-58)||(43278008-43278044)
chr8 (13-57)||(43386780-43386824)
chr8 (22-57)||(36756058-36756093)
chr8 (13-56)||(37323343-37323386)
chr8 (13-56)||(38591085-38591128)
chr8 (12-58)||(24068323-24068369)
chr8 (22-60)||(41178471-41178509)
chr8 (21-58)||(39323780-39323817)
chr8 (22-58)||(3271891-3271927)
chr8 (12-56)||(6844650-6844694)
chr8 (22-54)||(15989141-15989173)
chr8 (13-57)||(29739721-29739765)
chr8 (22-58)||(30864542-30864578)
chr8 (12-56)||(35945514-35945558)
chr8 (12-56)||(38790330-38790374)
chr8 (13-57)||(41866888-41866932)
chr8 (13-57)||(43275744-43275788)
[»] chr7 (33 HSPs)
chr7 (13-57)||(43006379-43006423)
chr7 (13-56)||(25153653-25153696)
chr7 (12-58)||(33458303-33458349)
chr7 (12-62)||(33459620-33459670)
chr7 (13-58)||(13446736-13446781)
chr7 (13-54)||(35128240-35128281)
chr7 (13-54)||(43930316-43930357)
chr7 (12-57)||(44114732-44114777)
chr7 (13-58)||(46675012-46675057)
chr7 (12-56)||(19278348-19278392)
chr7 (13-53)||(25155014-25155054)
chr7 (13-60)||(22061873-22061920)
chr7 (13-56)||(22744741-22744784)
chr7 (21-60)||(32894883-32894922)
chr7 (22-57)||(36703038-36703073)
chr7 (13-56)||(40926597-40926640)
chr7 (13-55)||(4858422-4858464)
chr7 (12-54)||(18802466-18802508)
chr7 (22-56)||(22060458-22060492)
chr7 (15-61)||(28325063-28325108)
chr7 (12-58)||(35480201-35480247)
chr7 (13-54)||(19279690-19279731)
chr7 (13-54)||(38408352-38408393)
chr7 (12-57)||(43936217-43936262)
chr7 (13-58)||(46457063-46457108)
chr7 (13-57)||(4973507-4973551)
chr7 (12-56)||(14107827-14107871)
chr7 (12-56)||(14417784-14417828)
chr7 (22-58)||(18670590-18670626)
chr7 (19-59)||(36673920-36673960)
chr7 (12-56)||(41616619-41616663)
chr7 (13-57)||(43007727-43007771)
chr7 (26-58)||(46672470-46672502)
[»] scaffold0046 (2 HSPs)
scaffold0046 (13-60)||(23397-23444)
scaffold0046 (13-59)||(24893-24939)
[»] scaffold0034 (2 HSPs)
scaffold0034 (13-60)||(98040-98087)
scaffold0034 (13-57)||(98759-98802)
[»] chr2 (20 HSPs)
chr2 (13-56)||(37867751-37867794)
chr2 (12-57)||(7038409-7038454)
chr2 (15-56)||(42596555-42596596)
chr2 (12-56)||(23177668-23177712)
chr2 (12-56)||(23588925-23588969)
chr2 (12-56)||(42029035-42029079)
chr2 (15-58)||(11575535-11575578)
chr2 (22-57)||(21010581-21010616)
chr2 (22-57)||(32614379-32614414)
chr2 (12-58)||(3666345-3666390)
chr2 (13-59)||(4701565-4701611)
chr2 (12-57)||(3254850-3254895)
chr2 (12-57)||(3665218-3665263)
chr2 (13-58)||(7036959-7037004)
chr2 (13-54)||(28109947-28109988)
chr2 (13-58)||(37869118-37869163)
chr2 (12-57)||(42027187-42027232)
chr2 (15-59)||(12958409-12958452)
chr2 (21-57)||(20921475-20921511)
chr2 (15-59)||(29424692-29424736)
[»] scaffold0290 (2 HSPs)
scaffold0290 (13-58)||(8372-8417)
scaffold0290 (22-57)||(9565-9600)
[»] scaffold0024 (1 HSPs)
scaffold0024 (13-57)||(73064-73108)
[»] scaffold0013 (2 HSPs)
scaffold0013 (13-57)||(96154-96198)
scaffold0013 (13-57)||(96893-96937)
[»] scaffold1974 (1 HSPs)
scaffold1974 (22-57)||(715-750)
[»] scaffold1878 (1 HSPs)
scaffold1878 (22-57)||(524-559)
[»] scaffold0177 (1 HSPs)
scaffold0177 (12-59)||(1747-1794)
[»] scaffold0065 (1 HSPs)
scaffold0065 (21-60)||(35354-35393)
[»] scaffold0178 (1 HSPs)
scaffold0178 (12-58)||(2342-2388)
[»] scaffold0003 (2 HSPs)
scaffold0003 (22-55)||(47066-47099)
scaffold0003 (12-53)||(48533-48574)
[»] scaffold2127 (1 HSPs)
scaffold2127 (13-57)||(593-637)
[»] scaffold0839 (1 HSPs)
scaffold0839 (22-58)||(18-54)
[»] scaffold0025 (1 HSPs)
scaffold0025 (22-54)||(56787-56819)


Alignment Details
Target: chr4 (Bit Score: 129; Significance: 7e-67; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 57 - 250
Target Start/End: Complemental strand, 15734269 - 15734077
Alignment:
Q  57 ttaacataattaccaaattctatcaatctgataaccaattgttaacaatcctttcctnnnnnnnngtgttaacaatcctaacaatctctattccaattga 156  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  15734269 ttaacataattaccaaattctatcaaactgataaccaattgttaacaatcctttcctaaaaaaaagtgttaacaatcctaacaatctctattccaattga 15734170  T
Q  157 attnnnnnnnntagtgtttaaatcaattagaataaccataagcatgataatgatcaccaataaataaggtcaaaattgatatgaataaagttca 250  Q
    |||        |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15734169 attaaaaaaa-tagtatttaaatcaattagaataaccataagcatgatcatgatcaccaataaataaggtcaaaattgatatgaataaagttca 15734077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 49923874 - 49923918
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  49923874 tgaaaactgaaaataagttaagggaccaaatgatatattaagcct 49923918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 37560377 - 37560424
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagccttaa 60  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||    
T  37560377 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagccttaa 37560424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 11113781 - 11113736
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  11113781 atgaaaaccgaaaataagttaagtgaccaaatgatgtattaagcct 11113736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 39590979 - 39590934
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||    
T  39590979 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 39590934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 6616289 - 6616333
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||    
T  6616289 tgaaaacggaaaataagttaagggaccaaatgatgtattaagcct 6616333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 11115057 - 11115101
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  11115057 atgaaaactgaaaataagttaagggaccaaatgatgtattaagcc 11115101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 39592367 - 39592411
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||  ||||||||||||||||||||||||||||||||||||    
T  39592367 tgaaaacataaaataagttaagggaccaaatgatatattaagcct 39592411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 54372784 - 54372741
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  54372784 tgaaaacggaaaataagttaagggaccaaatgatgtattaagcc 54372741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 1273512 - 1273550
Alignment:
Q  15 aaaaccgaaaataagttaagggaccaaatgatatattaa 53  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  1273512 aaaaccaaaaataagttaagggaccaaatgatatattaa 1273550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 27408801 - 27408759
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagc 55  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  27408801 tgaaaactgaaaataagttaagggaccaaatgatgtattaagc 27408759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 31711131 - 31711086
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||    
T  31711131 atgaaatccaaaaataagttaagggaccaaatgatgtattaagcct 31711086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 37642619 - 37642664
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||| ||||||||||||||||||||||| || |||||||||||    
T  37642619 tgaaaacagaaaataagttaagggaccaaataatgtattaagcctt 37642664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 29688052 - 29688096
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| |||||||||||||||||||||| || ||||||||||    
T  29688052 tgaaaaccaaaaataagttaagggaccaaataatgtattaagcct 29688096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 29833411 - 29833363
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagccttaa 60  Q
    |||||| ||||||||||||||||||||||||  || |||||||||||||    
T  29833411 atgaaatccgaaaataagttaagggaccaaagcatgtattaagccttaa 29833363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 33376256 - 33376212
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||    
T  33376256 tgaaaaccaaaaataagttaagagaccaaatgatgtattaagcct 33376212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 33377442 - 33377486
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| | ||||||||||||||||||||||||| ||||||||||    
T  33377442 tgaaaatcaaaaataagttaagggaccaaatgatgtattaagcct 33377486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 37559036 - 37558992
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||    
T  37559036 tgaaaaccaaaaataagttaaggaaccaaatgatgtattaagcct 37558992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 46796106 - 46796150
Alignment:
Q  15 aaaaccgaaaataagttaagggaccaaatgatatattaagcctta 59  Q
    |||||| ||||||||||||||||||||| ||| ||||||||||||    
T  46796106 aaaaccaaaaataagttaagggaccaaacgatgtattaagcctta 46796150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 54374030 - 54374074
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||||    
T  54374030 tgaaaactgaaaataagttaagggatcaaatgatgtattaagcct 54374074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 29686294 - 29686251
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||    
T  29686294 tgaaaaccaaaaataagttaagggactaaatgatgtattaagcc 29686251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 47668675 - 47668718
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||    
T  47668675 tgaaaacagaaaataagttaaaggaccaaatgatgtattaagcc 47668718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 12396951 - 12396997
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||| ||||||||||||||||||||||||  || |||||||||||    
T  12396951 atgaaatccgaaaataagttaagggaccaaaacatgtattaagcctt 12396997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 10403494 - 10403539
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||||    
T  10403494 tgaaaaccaaaaataagttaagagactaaatgatgtattaagcctt 10403539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 15446747 - 15446796
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagccttaac 61  Q
    |||||| || |||||||||||||||||||||  || ||||||||||||||    
T  15446747 atgaaatccaaaaataagttaagggaccaaagcatgtattaagccttaac 15446796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 15786991 - 15786946
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||||  |||||||||||| |||||||||||| ||||||||||    
T  15786991 atgaaaacaaaaaataagttaatggaccaaatgatgtattaagcct 15786946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 21104387 - 21104432
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||||  ||||||| |||||| |||||||||||||||||||||    
T  21104387 atgaaaacaaaaaataatttaaggaaccaaatgatatattaagcct 21104432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 30672141 - 30672186
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| ||||||||||||||||||||||||  || ||||||||||    
T  30672141 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 30672186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 38371883 - 38371928
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||| |||||||||||||| |||| |||||| |||||||||||    
T  38371883 tgaaaacagaaaataagttaagagaccgaatgatgtattaagcctt 38371928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 55953930 - 55953971
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaag 54  Q
    |||||| | |||||||||||||||| ||||||||||||||||    
T  55953930 tgaaaatcaaaaataagttaagggatcaaatgatatattaag 55953971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 28103563 - 28103607
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| || ||||||||||||||||||||||||| | |||||||    
T  28103563 atgaaatccaaaaataagttaagggaccaaatgatgtgttaagcc 28103607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 29834509 - 29834553
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| ||||||||||||||||||||||||  || |||||||||    
T  29834509 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 29834553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 30671033 - 30670989
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| |||||||||||||||| |||||||  ||||||||||||    
T  30671033 atgaaatccgaaaataagttaagagaccaaaacatatattaagcc 30670989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 30682759 - 30682711
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagccttaa 60  Q
    ||||||||  |||||||||||||||||||||| || |||||||| ||||    
T  30682759 atgaaaactaaaaataagttaagggaccaaattatgtattaagctttaa 30682711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 19524021 - 19523978
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  19524021 tgaaaaccaaaaataagttaagggaccaaatgatatattaagcc 19523978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 1273417 - 1273463
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||    
T  1273417 atgaaaaccaaaaataagttaagggaccaaacgatatattaagcctt 1273463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 41905214 - 41905168
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  41905214 atgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 41905168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 19525366 - 19525411
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||    
T  19525366 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 19525411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 19825912 - 19825868
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  19825912 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagcct 19825868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 5382979 - 5382936
Alignment:
Q  14 gaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||    
T  5382979 gaaaaccaaaaataagttaagggaccaaatgatgtattaagcct 5382936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 18678014 - 18677971
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||| ||||||||||||||||||||||||| |||||||||    
T  18678014 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagcc 18677971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 40059405 - 40059448
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagc 55  Q
    ||||||||| |||||||||||||||||||||| |||||||||||    
T  40059405 atgaaaaccaaaaataagttaagggaccaaattatatattaagc 40059448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 12933790 - 12933748
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaag 54  Q
    ||||||||| ||||||||||||||||| |||||||||||||||    
T  12933790 atgaaaaccaaaaataagttaagggactaaatgatatattaag 12933748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 12936179 - 12936225
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  12936179 atgaaaaccaaaaataagttaagggactaaatgatgtattaagcctt 12936225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 30912352 - 30912307
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||| ||||||||||||||| |||||||||| |||||||||||    
T  30912352 tgaaaacagaaaataagttaaggaaccaaatgatgtattaagcctt 30912307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 6629769 - 6629725
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||    
T  6629769 tgaaaaccacaaataagttaagggaccaaatgatgtattaagcct 6629725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 30916196 - 30916240
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||  ||||||||||||||||||||||||| ||||||||||    
T  30916196 tgaaaacataaaataagttaagggaccaaatgatgtattaagcct 30916240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 33362654 - 33362690
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||||||||||||||||||||||||||| ||||    
T  33362654 aaaataagttaagggaccaaatgatatattaaacctt 33362690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 6629813 - 6629848
Alignment:
Q  25 ataagttaagggaccaaatgatatattaagccttaa 60  Q
    |||||||| |||||||||||||||||||||||||||    
T  6629813 ataagttaggggaccaaatgatatattaagccttaa 6629848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 1273128 - 1273086
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaag 54  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||    
T  1273128 atgaaaaccaaaaataaattaagggaccaaatgatgtattaag 1273086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 1663225 - 1663179
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctta 59  Q
    ||||| || ||||||||||||||||| ||||||| ||||||||||||    
T  1663225 tgaaatccaaaaataagttaagggactaaatgatgtattaagcctta 1663179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 4568051 - 4568097
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||| ||||||||||||||||||||||||  || |||||||||||    
T  4568051 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 4568097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 12947951 - 12947909
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaag 54  Q
    ||||||| | ||||||||||||||||| |||||||||||||||    
T  12947951 atgaaaatcaaaaataagttaagggactaaatgatatattaag 12947909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 12950337 - 12950383
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||||  |||||||||||||||| ||||||| |||||||||||    
T  12950337 atgaaaaccataaataagttaagggactaaatgatgtattaagcctt 12950383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 15510340 - 15510386
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||| ||||||||||||||||||||||||  || |||||||||||    
T  15510340 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 15510386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 21389218 - 21389264
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||||| |||||||||||||||||||||  || |||||||||||    
T  21389218 atgaaaaccaaaaataagttaagggaccaaagcatgtattaagcctt 21389264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 24805327 - 24805285
Alignment:
Q  15 aaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||    
T  24805327 aaaaccaaaaataagttaagagaccaaatgatgtattaagcct 24805285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 8762487 - 8762520
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagc 55  Q
    ||||||||||||||||||||| ||||||||||||    
T  8762487 aaaataagttaagggaccaaacgatatattaagc 8762520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 10085932 - 10085968
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  10085932 aaaataagttaagggaccaaatgatgtattaaacctt 10085968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 54
Target Start/End: Original strand, 24805373 - 24805401
Alignment:
Q  26 taagttaagggaccaaatgatatattaag 54  Q
    |||||||||||||||||||||||||||||    
T  24805373 taagttaagggaccaaatgatatattaag 24805401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 38394790 - 38394826
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||||||||||||||||  ||||||||||||||    
T  38394790 aaaataagttaagggaccaaaacatatattaagcctt 38394826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 8372693 - 8372740
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctta 59  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  8372693 atgaaaaccaaaaataagttaagggaccaaacgatatattaagcctta 8372740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 41387511 - 41387556
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||    
T  41387511 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 41387556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 51825699 - 51825744
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  51825699 tgaaatccaaaaataagttaagggaccaaatgatatattaagcctt 51825744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 48338195 - 48338239
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||    
T  48338195 tgaaaactgaaaataagttaagggaccaaatgatgtattaagcct 48338239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 49122079 - 49122123
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  49122079 atgaaaaccaaaaataagttaaaggaccaaatgatatattaagcc 49122123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 53808354 - 53808314
Alignment:
Q  15 aaaaccgaaaataagttaagggaccaaatgatatattaagc 55  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  53808354 aaaaccgaaaataagttaagggaccaaatgatgtattaagc 53808314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 17350180 - 17350223
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||| ||||||||||||||||||||||||| |||||||||    
T  17350180 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagcc 17350223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 54752645 - 54752607
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagccttaa 60  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  54752645 aaaataagttaagggaccaaatgatgtattaagccttaa 54752607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 41386168 - 41386123
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||| ||||||||||||||||||||| ||| |||||||||||    
T  41386168 tgaaaaccaaaaataagttaagggaccaaacgatgtattaagcctt 41386123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 42633964 - 42634009
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||    
T  42633964 tgaaaatcaaaaataagttaagggaccaaatgatgtattaagcctt 42634009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 8371259 - 8371203
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagccttaacataatta 68  Q
    ||||||||  |||||||||||||||| |||||||| |||||||||| || |||||||    
T  8371259 atgaaaacaaaaaataagttaagggatcaaatgatgtattaagcctaaaaataatta 8371203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 10987730 - 10987774
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||    
T  10987730 atgaaaaccaaaaataagttaagggatcaaatgatgtattaagcc 10987774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 30838557 - 30838593
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||||||||||||||||| ||||||||||||||    
T  30838557 aaaataagttaagggaccaaatcatatattaagcctt 30838593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 54654043 - 54654087
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| || ||||||||||||||||||||||||| |||||||||    
T  54654043 atgaaatccaaaaataagttaagggaccaaatgatgtattaagcc 54654087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 17345349 - 17345306
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||| |||||||||||||||||||||| || |||||||||    
T  17345349 tgaaaaccaaaaataagttaagggaccaaataatgtattaagcc 17345306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 32980530 - 32980573
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||||    
T  32980530 tgaaaacagaaaataagttaatggatcaaatgatatattaagcc 32980573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 42632744 - 42632701
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||    
T  42632744 tgaaaaccaaaagtaagttaagggaccaaatgatgtattaagcc 42632701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 48336385 - 48336342
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||    
T  48336385 tgaaaactgaaaataagttaagggagcaaatgatgtattaagcc 48336342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 32973178 - 32973132
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||| ||||||||||||||||||||||||  || |||||||||||    
T  32973178 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 32973132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 36626761 - 36626727
Alignment:
Q  21 gaaaataagttaagggaccaaatgatatattaagc 55  Q
    ||||||||||||| |||||||||||||||||||||    
T  36626761 gaaaataagttaaaggaccaaatgatatattaagc 36626727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 43101933 - 43101899
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgat 46  Q
    ||||||||| |||||||||||||||||||||||||    
T  43101933 atgaaaaccaaaaataagttaagggaccaaatgat 43101899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 53047936 - 53047890
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||| ||||||||||||||||||||||||  || |||||||||||    
T  53047936 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 53047890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 11483064 - 11483109
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| | ||||||||||||||||||||||  |||||||||||||    
T  11483064 atgaaatctgaaaataagttaagggaccaaagcatatattaagcct 11483109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 26798986 - 26799027
Alignment:
Q  15 aaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| ||||||||||||| ||||||||||| |||||||||    
T  26798986 aaaaccaaaaataagttaagagaccaaatgatgtattaagcc 26799027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 52292633 - 52292588
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| ||||||||||||||||||||||||  || ||||||||||    
T  52292633 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 52292588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 53809570 - 53809615
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||||  ||||||||||||||||| ||||||| ||||||||||    
T  53809570 atgaaaacaaaaaataagttaagggactaaatgatgtattaagcct 53809615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 19579371 - 19579415
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| ||||||||||||||||||||||||  || |||||||||    
T  19579371 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 19579415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 25585920 - 25585956
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  25585920 aaaataaattaagggaccaaataatatattaagcctt 25585956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 32974300 - 32974344
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| ||||||||||||||||||||||||  || |||||||||    
T  32974300 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 32974344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 43103383 - 43103419
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  43103383 aaaataagttaagggatcaaataatatattaagcctt 43103419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 48035401 - 48035445
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| ||||||||||||||||||||||||  || |||||||||    
T  48035401 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 48035445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 51400253 - 51400209
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| |||||||||||||||||||||  || ||||||||||    
T  51400253 tgaaaaccaaaaataagttaagggaccaaaacatgtattaagcct 51400209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 51824155 - 51824123
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaag 54  Q
    ||||||||||||| |||||||||||||||||||    
T  51824155 aaaataagttaagagaccaaatgatatattaag 51824123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 5311317 - 5311271
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctta 59  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  5311317 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctta 5311271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 683618 - 683661
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||    
T  683618 tgaaaacagaaaataagttaaaggaccaaatgatatattaagcc 683661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 18139565 - 18139607
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagc 55  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  18139565 tgaaaacggaaaataagttaagggaccaaatgatgtattaagc 18139607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 31738401 - 31738355
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctta 59  Q
    |||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  31738401 tgaaaaccaaaaataagttaagggaccaaaggatgtattaagcctta 31738355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 33802095 - 33802137
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagc 55  Q
    |||||||| ||||||||||||||||||||||||| ||||||||    
T  33802095 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagc 33802137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 15435721 - 15435686
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||||||||||||||||||||| ||||||||||    
T  15435721 aaaataagttaagggaccaaatgatgtattaagcct 15435686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 34084210 - 34084253
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||||  |||||||||||||||||||||||| |||||||||    
T  34084210 tgaaaaccagaaataagttaagggaccaaatgatgtattaagcc 34084253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 8447260 - 8447215
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| |||||||||||||||||||| |||  |||||||||||||    
T  8447260 atgaaatccgaaaataagttaagggactaaagcatatattaagcct 8447215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 8456064 - 8456019
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| |||||||||||||||||||| |||  |||||||||||||    
T  8456064 atgaaatccgaaaataagttaagggactaaagcatatattaagcct 8456019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 27438829 - 27438788
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaa 53  Q
    |||||| || ||||||||||||||||||||||||| ||||||    
T  27438829 atgaaatccaaaaataagttaagggaccaaatgatgtattaa 27438788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 27440262 - 27440295
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagc 55  Q
    ||||||||||||||||||||||||| ||||||||    
T  27440262 aaaataagttaagggaccaaatgatgtattaagc 27440295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 19368595 - 19368639
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| ||||||||||||||||||||||||  || |||||||||    
T  19368595 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 19368639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 33807727 - 33807683
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| |||||||||||||||| ||||| || ||||||||||    
T  33807727 tgaaaaccaaaaataagttaagggatcaaataatgtattaagcct 33807683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 25787242 - 25787288
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctta 59  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  25787242 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctta 25787288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 47411527 - 47411569
Alignment:
Q  14 gaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  47411527 gaaaaccgaaaataagttaagggaccaaatgatgtattaagcc 47411569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 25786006 - 25785962
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  25786006 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagcct 25785962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 52439363 - 52439415
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagccttaacataa 65  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| ||| ||||    
T  52439363 tgaaaacagaaaataagttaagggaccaaatgatgtattaagccataaaataa 52439415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 34653473 - 34653430
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||||||||||||||||||||||||||||| |||| ||||    
T  34653473 tgaaaaccgaaaataagttaagggaccaaatgatgtattgagcc 34653430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 14071281 - 14071327
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctta 59  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  14071281 tgaaaaccaaaaataaattaagggaccaaatgatgtattaagcctta 14071327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 13929333 - 13929292
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaag 54  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  13929333 tgaaaaccaaaaataagttaagggaccaaatgatgtattaag 13929292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 47560177 - 47560133
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||    
T  47560177 tgaaaatcgaaaataaggtaagggaccaaatgatgtattaagcct 47560133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 48935187 - 48935235
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagccttaa 60  Q
    |||||| |||||||||||||||||||| |||  ||||||||||||||||    
T  48935187 atgaaatccgaaaataagttaagggacgaaagcatatattaagccttaa 48935235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 49139838 - 49139794
Alignment:
Q  14 gaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||    
T  49139838 gaaaaccaaaaataagttaagggaccaaatgatgtattaaacctt 49139794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 49619897 - 49619941
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||    
T  49619897 tgaaaactgaaaataaattaagggaccaaatgatgtattaagcct 49619941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 52741517 - 52741485
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaag 54  Q
    |||||||||||||||||||||||||||||||||    
T  52741517 aaaataagttaagggaccaaatgatatattaag 52741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 3978073 - 3978038
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||||||||||||||||||||| ||||||||||    
T  3978073 aaaataagttaagggaccaaatgatgtattaagcct 3978038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 21277032 - 21276989
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||| |||||||||||||||||||||| || |||||||||    
T  21277032 tgaaaaccaaaaataagttaagggaccaaataatgtattaagcc 21276989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 33793817 - 33793774
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||| |||||||||||||||| |||||||| |||||||||    
T  33793817 tgaaaaccaaaaataagttaagggatcaaatgatgtattaagcc 33793774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 38451590 - 38451547
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||  ||||||||||||||||||||||||| |||||||||    
T  38451590 tgaaaacataaaataagttaagggaccaaatgatgtattaagcc 38451547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 44977259 - 44977216
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||| |||||||||||||||||||||| || |||||||||    
T  44977259 tgaaaaccaaaaataagttaagggaccaaataatgtattaagcc 44977216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 2236852 - 2236806
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||| ||||||||||||||||||||||||  || |||||||||||    
T  2236852 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 2236806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 13930753 - 13930791
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatatt 51  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  13930753 tgaaaaccaaaaataagttaagggaccaaatgatgtatt 13930791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 2238055 - 2238100
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| ||||||||||||||||||||||||  || ||||||||||    
T  2238055 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 2238100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 48974483 - 48974528
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| ||||||||||||||||||||||||  || ||||||||||    
T  48974483 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 48974528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 35683094 - 35683050
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| ||||||||||||||||||||||||  || |||||||||    
T  35683094 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 35683050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 47136765 - 47136809
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| |||||||||||| ||| |||||||| ||||||||||    
T  47136765 tgaaaaccaaaaataagttaatggatcaaatgatgtattaagcct 47136809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 50678395 - 50678359
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||||||||||||||||| || |||||||||||    
T  50678395 aaaataagttaagggaccaaatcatgtattaagcctt 50678359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 16363890 - 16363934
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  16363890 tgaaaaccaaaaataagttaagggaccaaattatatattaagcct 16363934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 31623944 - 31623900
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  31623944 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagcct 31623900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 39544968 - 39544925
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  39544968 tgaaaacagaaaataagttaagggaccaaatgatgtattaagcc 39544925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 8395060 - 8395018
Alignment:
Q  15 aaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  8395060 aaaaccaaaaataagttaagagaccaaatgatatattaagcct 8395018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 36940111 - 36940153
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagc 55  Q
    |||||||| ||||||||||||||||||||||||| ||||||||    
T  36940111 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagc 36940153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 3237717 - 3237762
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||    
T  3237717 atgaaatccaaaaataagttaagggaccaaatgatgtattaagcct 3237762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 10053822 - 10053867
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||    
T  10053822 tgaaaaccaaaaataagttaagggactaaatgatgtattaagcctt 10053867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 11081110 - 11081155
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||    
T  11081110 tgaaaacagaaaataagttaagggatcaaatgatgtattaagcctt 11081155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 10052131 - 10052099
Alignment:
Q  24 aataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||||||||||||||||||||||||||||    
T  10052131 aataagttaagggaccaaatgatatattaagcc 10052099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 35943946 - 35943902
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||    
T  35943946 atgaaaaccaaaaataagttaagggaccaaacgatgtattaagcc 35943902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 38589850 - 38589814
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||||||||||||||||||||| |||||||||||    
T  38589850 aaaataagttaagggaccaaatgatgtattaagcctt 38589814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 43278008 - 43278044
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||||||||||| ||||||||||||||||||||    
T  43278008 aaaataagttaagggatcaaatgatatattaagcctt 43278044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 43386780 - 43386824
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||    
T  43386780 tgaaaaccaaaaataagttaagggaccatatgatgtattaagcct 43386824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 36756093 - 36756058
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||||||||||||||||||||| ||||||||||    
T  36756093 aaaataagttaagggaccaaatgatgtattaagcct 36756058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 37323386 - 37323343
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||    
T  37323386 tgaaaaccaaaaataaattaagggaccaaatgatgtattaagcc 37323343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 38591085 - 38591128
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| | ||||||||||||||||||||||||| |||||||||    
T  38591085 tgaaaatcaaaaataagttaagggaccaaatgatgtattaagcc 38591128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 24068369 - 24068323
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||||| |||||||||||||||||||||  || |||||||||||    
T  24068369 atgaaaaccaaaaataagttaagggaccaaagcatgtattaagcctt 24068323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 41178509 - 41178471
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagccttaa 60  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  41178509 aaaataagttaagggaccaaaacatatattaagccttaa 41178471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 39323817 - 39323780
Alignment:
Q  21 gaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||||||||||||  |||||||||||||||||||    
T  39323817 gaaaataagttaagggattaaatgatatattaagcctt 39323780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 3271927 - 3271891
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||||||||||||||||| || |||||||||||    
T  3271927 aaaataagttaagggaccaaatcatgtattaagcctt 3271891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 6844650 - 6844694
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| ||||||||||||||||||||||||  || |||||||||    
T  6844650 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 6844694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 15989173 - 15989141
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaag 54  Q
    |||||||||||||||||||||| ||||||||||    
T  15989173 aaaataagttaagggaccaaatcatatattaag 15989141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 29739721 - 29739765
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| ||||||| ||||| ||||||||||| ||||||||||    
T  29739721 tgaaaaccaaaaataaattaagagaccaaatgatgtattaagcct 29739765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 30864542 - 30864578
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||||||||||||||||| || |||||||||||    
T  30864542 aaaataagttaagggaccaaatcatgtattaagcctt 30864578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 35945514 - 35945558
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||||  |||||||||||||||||||||| || |||||||||    
T  35945514 atgaaaacaaaaaataagttaagggaccaaataatgtattaagcc 35945558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 38790330 - 38790374
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||| |||||||||||||||||| ||| |||| |||||||||    
T  38790330 atgaaaaacgaaaataagttaagggatcaactgatgtattaagcc 38790374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 41866932 - 41866888
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| | ||||||||||||||||||||||| | ||||||||||    
T  41866932 tgaaaatcaaaaataagttaagggaccaaatggtgtattaagcct 41866888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 43275788 - 43275744
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||  ||||||||||||| ||||||||||| ||||||||||    
T  43275788 tgaaaacaaaaaataagttaagagaccaaatgatgtattaagcct 43275744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 43006423 - 43006379
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||    
T  43006423 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagcct 43006379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 25153696 - 25153653
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| ||||||||||||||||||||||||||| |||||||||    
T  25153696 tgaaaatcgaaaataagttaagggaccaaatgatgtattaagcc 25153653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 33458349 - 33458303
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||    
T  33458349 atgaaaaccaaaaataagttaaaggaccaaatgatgtattaagcctt 33458303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 33459620 - 33459670
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagccttaaca 62  Q
    ||||||||| ||||||||||| ||||| ||||||| |||||||||||||||    
T  33459620 atgaaaaccaaaaataagttatgggactaaatgatgtattaagccttaaca 33459670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 13446736 - 13446781
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||||    
T  13446736 tgaaaaccaaaaataagttaagtgaccaaatgatgtattaagcctt 13446781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 35128240 - 35128281
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaag 54  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  35128240 tgaaaaccaaaaataagttaagggaccaaatgatgtattaag 35128281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 43930357 - 43930316
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaag 54  Q
    |||||| | |||||||||||||||||||||||||||||||||    
T  43930357 tgaaaatcaaaaataagttaagggaccaaatgatatattaag 43930316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 44114732 - 44114777
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||||    
T  44114732 atgaaaactaaaaataagttaagggaccaaatgatgtattaagcct 44114777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 46675012 - 46675057
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||    
T  46675012 tgaaaaccaaaaataagttaagggatcaaatgatgtattaagcctt 46675057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 19278392 - 19278348
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| || ||||||||||||||||||||||||| |||||||||    
T  19278392 atgaaatccaaaaataagttaagggaccaaatgatgtattaagcc 19278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 25155014 - 25155054
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaa 53  Q
    |||||||| ||||||||||||||||||||||||| ||||||    
T  25155014 tgaaaaccaaaaataagttaagggaccaaatgatgtattaa 25155054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 22061873 - 22061920
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagccttaa 60  Q
    |||||||  ||||||||||||||||| ||||||| |||||||||||||    
T  22061873 tgaaaacacaaaataagttaagggacaaaatgatgtattaagccttaa 22061920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 22744784 - 22744741
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| | ||||||||||||||||||||||||| |||||||||    
T  22744784 tgaaaatcaaaaataagttaagggaccaaatgatgtattaagcc 22744741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 32894883 - 32894922
Alignment:
Q  21 gaaaataagttaagggaccaaatgatatattaagccttaa 60  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  32894883 gaaaataagttaagggaccaaatgatacattaaaccttaa 32894922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 36703038 - 36703073
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||||||||||||||||||||| ||||||||||    
T  36703038 aaaataagttaagggaccaaatgatgtattaagcct 36703073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 40926597 - 40926640
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||    
T  40926597 tgaaaaccaaaaataagttaagggactaaatgatgtattaagcc 40926640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 4858422 - 4858464
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagc 55  Q
    |||||||  ||||||||||||||||||||||||| ||||||||    
T  4858422 tgaaaactaaaaataagttaagggaccaaatgatgtattaagc 4858464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 18802466 - 18802508
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaag 54  Q
    ||||||||  ||||||||||||||||||||||||| |||||||    
T  18802466 atgaaaacaaaaaataagttaagggaccaaatgatgtattaag 18802508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 22060492 - 22060458
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||||||||| |||||||||||||||||||||    
T  22060492 aaaataagttaagtgaccaaatgatatattaagcc 22060458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 28325108 - 28325063
Alignment:
Q  15 aaaaccgaaaataagttaagggaccaaatgatatattaagccttaac 61  Q
    |||||| |||||||||||||| |||||||||| ||||||||||||||    
T  28325108 aaaaccaaaaataagttaagg-accaaatgatgtattaagccttaac 28325063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 35480247 - 35480201
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||| ||||||||||||||||||||||||  || |||||||||||    
T  35480247 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 35480201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 19279690 - 19279731
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaag 54  Q
    |||||||| ||||||||||||||||||||| ||| |||||||    
T  19279690 tgaaaaccaaaaataagttaagggaccaaacgatgtattaag 19279731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 38408352 - 38408393
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaag 54  Q
    |||||| | ||||||| |||||||||||||||||||||||||    
T  38408352 tgaaaatcaaaaataaattaagggaccaaatgatatattaag 38408393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 43936217 - 43936262
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| || |||||||||||||||||||||  |||||||||||||    
T  43936217 atgaaatccaaaaataagttaagggaccaaactatatattaagcct 43936262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 46457108 - 46457063
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||| |||||||||||||| |||||| ||| |||||||||||    
T  46457108 tgaaaaccaaaaataagttaaggaaccaaacgatgtattaagcctt 46457063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 4973551 - 4973507
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||| |||||||||||||||||| |||| || ||||||||||    
T  4973551 tgaaaactgaaaataagttaagggactaaataatgtattaagcct 4973507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 14107871 - 14107827
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||||| ||||||||||||  ||||||||||| |||||||||    
T  14107871 atgaaaaccaaaaataagttaaatgaccaaatgatgtattaagcc 14107827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 14417828 - 14417784
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||||| ||||||||||||  ||||||||||| |||||||||    
T  14417828 atgaaaaccaaaaataagttaaatgaccaaatgatgtattaagcc 14417784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 18670590 - 18670626
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  18670590 aaaataagttaagggaccaaaggatgtattaagcctt 18670626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 36673920 - 36673960
Alignment:
Q  19 ccgaaaataagttaagggaccaaatgatatattaagcctta 59  Q
    ||||||||||||||||||||||||  || ||||||||||||    
T  36673920 ccgaaaataagttaagggaccaaagcatgtattaagcctta 36673960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 41616663 - 41616619
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||| ||||||||||||||||||||||||  || |||||||||    
T  41616663 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 41616619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 43007727 - 43007771
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| | |||||||||| | |||||||||||||||||||||||    
T  43007727 tgaaaatcaaaaataagttgaaggaccaaatgatatattaagcct 43007771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 46672502 - 46672470
Alignment:
Q  26 taagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||||||||||||||||| |||||||||||    
T  46672502 taagttaagggaccaaatgatgtattaagcctt 46672470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 23444 - 23397
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagccttaa 60  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||||||    
T  23444 tgaaaaccaaaaataagttaagggaccatatgatgtattaagccttaa 23397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 24893 - 24939
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctta 59  Q
    |||||||| ||||||| ||||||||||||| ||| ||||||||||||    
T  24893 tgaaaaccaaaaataaattaagggaccaaacgatgtattaagcctta 24939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 98087 - 98040
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagccttaa 60  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  98087 tgaaaactgaaaataagttaagggatcaaatgatgtattaagccttaa 98040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 98759 - 98802
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||| ||||||||||||||||||| |||||| ||||||||||    
T  98759 tgaaaactgaaaataagttaagggacc-aatgatgtattaagcct 98802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 37867794 - 37867751
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||||||| ||||||||||||||||||||||||| |||||||||    
T  37867794 tgaaaaccaaaaataagttaagggaccaaatgatgtattaagcc 37867751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 7038409 - 7038454
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||    
T  7038409 atgaaatccaaaaataagttaagggaccaaatgatgtattaagcct 7038454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 42596596 - 42596555
Alignment:
Q  15 aaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  42596596 aaaaacgaaaataagttaagggaccaaatgatgtattaagcc 42596555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 23177712 - 23177668
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||    
T  23177712 atgaaaaccaaaaataaattaagggaccaaatgatgtattaagcc 23177668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 23588969 - 23588925
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||    
T  23588969 atgaaaaccaaaaataaattaagggaccaaatgatgtattaagcc 23588925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 42029035 - 42029079
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcc 56  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||    
T  42029035 atgaaaaccaaaaatacgttaagggaccaaatgatgtattaagcc 42029079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 11575535 - 11575578
Alignment:
Q  15 aaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||| |||||||||||| |||||||||||| |||||||||||    
T  11575535 aaaaccaaaaataagttaatggaccaaatgatgtattaagcctt 11575578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 21010581 - 21010616
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||||||||||| |||||||||||||||||||    
T  21010581 aaaataagttaagggatcaaatgatatattaagcct 21010616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 32614414 - 32614379
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| |||||||||||||||||||||||||||    
T  32614414 aaaataagctaagggaccaaatgatatattaagcct 32614379  T

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Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 3666345 - 3666390
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||| ||||||||||||||||||||||||| || |||||||||||    
T  3666345 atgaaatccgaaaataagttaagggaccaaattat-tattaagcctt 3666390  T

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Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 4701565 - 4701611
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctta 59  Q
    |||||| | ||||||| ||||||||||||||||||||||||| ||||    
T  4701565 tgaaaatcaaaaataaattaagggaccaaatgatatattaagtctta 4701611  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 3254895 - 3254850
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| ||||||||||||||||||||||||  || ||||||||||    
T  3254895 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 3254850  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 3665263 - 3665218
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| ||||||||||||||||||||||||  || ||||||||||    
T  3665263 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 3665218  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 7037004 - 7036959
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||| || |||||||||||| |||||||||||| |||||||||||    
T  7037004 tgaaatccaaaaataagttaaaggaccaaatgatgtattaagcctt 7036959  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 28109947 - 28109988
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaag 54  Q
    |||||||  |||||||||||||||||||||| ||||||||||    
T  28109947 tgaaaacgaaaaataagttaagggaccaaatcatatattaag 28109988  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 37869118 - 37869163
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||| | |||||||||||||||||||||  ||||||||||||||    
T  37869118 tgaaaatcaaaaataagttaagggaccaaacaatatattaagcctt 37869163  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 42027232 - 42027187
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||| | ||||||||||||||||||||| ||| ||||||||||    
T  42027232 atgaaaatcaaaaataagttaagggaccaaacgatgtattaagcct 42027187  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 12958452 - 12958409
Alignment:
Q  15 aaaaccgaaaataagttaagggaccaaatgatatattaagcctta 59  Q
    |||||| |||||||||||||  |||||||||||||||||||||||    
T  12958452 aaaaccaaaaataagttaaga-accaaatgatatattaagcctta 12958409  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 20921511 - 20921475
Alignment:
Q  21 gaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| |||| |||||||||||||||||||||||    
T  20921511 gaaaataaattaaaggaccaaatgatatattaagcct 20921475  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 29424692 - 29424736
Alignment:
Q  15 aaaaccgaaaataagttaagggaccaaatgatatattaagcctta 59  Q
    |||||| |||||||||||||||||||||  || ||||||||||||    
T  29424692 aaaaccaaaaataagttaagggaccaaacaatgtattaagcctta 29424736  T

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Target: scaffold0290 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 8417 - 8372
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||    
T  8417 tgaaaaccaaaaataagttaagggaccaaatgatggattaagcctt 8372  T

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Target: scaffold0290; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 9565 - 9600
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||||||||||||||||||||| ||||||||||    
T  9565 aaaataagttaagggaccaaatgatgtattaagcct 9600  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 73064 - 73108
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||    
T  73064 tgaaaaccaaaaataagttaagggactaaatgatgtattaagcct 73108  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 96198 - 96154
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||    
T  96198 tgaaaatcgaaaataagttaatggaccaaatgatgtattaagcct 96154  T

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Target: scaffold0013; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 96893 - 96937
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| |||||||||||||||| |||||||| ||||||||||    
T  96893 tgaaaaccaaaaataagttaagggatcaaatgatgtattaagcct 96937  T

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Target: scaffold1974 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 715 - 750
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||||||||||||||||||||| ||||||||||    
T  715 aaaataagttaagggaccaaatgatgtattaagcct 750  T

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Target: scaffold1878 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 559 - 524
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcct 57  Q
    ||||||||||||||||||||||||| ||||||||||    
T  559 aaaataagttaagggaccaaatgatgtattaagcct 524  T

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Target: scaffold0177 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 1794 - 1747
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctta 59  Q
    |||||| ||||||||||||||||||||||||  || ||||||||||||    
T  1794 atgaaatccgaaaataagttaagggaccaaagcatgtattaagcctta 1747  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 35393 - 35354
Alignment:
Q  21 gaaaataagttaagggaccaaatgatatattaagccttaa 60  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  35393 gaaaataaggtaagggaacaaatgatatattaagccttaa 35354  T

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Target: scaffold0178 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 2342 - 2388
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaagcctt 58  Q
    ||||||||| |||||||||||||||||||||  || |||||||||||    
T  2342 atgaaaaccaaaaataagttaagggaccaaagcatgtattaagcctt 2388  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 47099 - 47066
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagc 55  Q
    ||||||||||||||||||||||||| ||||||||    
T  47099 aaaataagttaagggaccaaatgatgtattaagc 47066  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 48533 - 48574
Alignment:
Q  12 atgaaaaccgaaaataagttaagggaccaaatgatatattaa 53  Q
    |||||| || ||||||||||||||||||||||||| ||||||    
T  48533 atgaaatccaaaaataagttaagggaccaaatgatgtattaa 48574  T

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Target: scaffold2127 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 593 - 637
Alignment:
Q  13 tgaaaaccgaaaataagttaagggaccaaatgatatattaagcct 57  Q
    |||||||| |||||||||||| ||| |||||||| ||||||||||    
T  593 tgaaaaccaaaaataagttaatggatcaaatgatgtattaagcct 637  T

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Target: scaffold0839 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 54 - 18
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaagcctt 58  Q
    |||||||||||||||||||||| || |||||||||||    
T  54 aaaataagttaagggaccaaatcatgtattaagcctt 18  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 56787 - 56819
Alignment:
Q  22 aaaataagttaagggaccaaatgatatattaag 54  Q
    ||||||||||||||||||||||||| |||||||    
T  56787 aaaataagttaagggaccaaatgatttattaag 56819  T

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