View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18721_high_18 (Length: 227)

Name: NF18721_high_18
Description: NF18721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18721_high_18
NF18721_high_18
[»] chr4 (49 HSPs)
chr4 (172-227)||(16482209-16482264)
chr4 (173-227)||(18454275-18454329)
chr4 (173-227)||(45900707-45900761)
chr4 (173-227)||(53231855-53231909)
chr4 (172-227)||(1386160-1386215)
chr4 (172-227)||(22273010-22273064)
chr4 (172-227)||(56467494-56467548)
chr4 (172-225)||(16493645-16493698)
chr4 (173-226)||(51965451-51965504)
chr4 (170-222)||(16482133-16482185)
chr4 (171-227)||(43751125-43751180)
chr4 (175-227)||(44519541-44519592)
chr4 (172-227)||(15156997-15157052)
chr4 (172-227)||(17289823-17289877)
chr4 (172-227)||(21780278-21780332)
chr4 (172-227)||(21798489-21798543)
chr4 (172-227)||(39868548-39868602)
chr4 (172-222)||(9791572-9791621)
chr4 (172-218)||(16493598-16493644)
chr4 (172-222)||(17289903-17289953)
chr4 (172-222)||(21798413-21798462)
chr4 (189-227)||(29431502-29431540)
chr4 (172-222)||(43751207-43751256)
chr4 (182-227)||(5401853-5401898)
chr4 (172-209)||(6439265-6439302)
chr4 (172-209)||(10682762-10682799)
chr4 (172-209)||(10717989-10718026)
chr4 (172-209)||(10896402-10896439)
chr4 (172-209)||(10931758-10931795)
chr4 (177-226)||(11563377-11563426)
chr4 (173-226)||(18320619-18320672)
chr4 (182-227)||(24215660-24215705)
chr4 (172-227)||(51396239-51396291)
chr4 (172-221)||(56467576-56467624)
chr4 (173-220)||(13334905-13334951)
chr4 (172-227)||(47321065-47321119)
chr4 (174-221)||(56216873-56216919)
chr4 (172-202)||(9001524-9001554)
chr4 (172-202)||(10682864-10682894)
chr4 (172-202)||(10896504-10896534)
chr4 (172-202)||(17313007-17313037)
chr4 (172-222)||(18320542-18320592)
chr4 (172-222)||(18454356-18454405)
chr4 (173-227)||(19875894-19875947)
chr4 (175-221)||(44519622-44519667)
chr4 (172-202)||(45900601-45900631)
chr4 (172-202)||(45900631-45900661)
chr4 (182-227)||(27579666-27579710)
chr4 (175-227)||(37273351-37273402)
[»] chr7 (51 HSPs)
chr7 (170-222)||(31186831-31186883)
chr7 (172-227)||(1693298-1693353)
chr7 (172-227)||(31186749-31186804)
chr7 (172-222)||(13286791-13286841)
chr7 (172-227)||(13286710-13286765)
chr7 (172-227)||(15037308-15037363)
chr7 (172-227)||(23371603-23371657)
chr7 (172-227)||(23784735-23784790)
chr7 (172-227)||(26050253-26050307)
chr7 (172-227)||(26059612-26059666)
chr7 (176-227)||(45163997-45164048)
chr7 (172-222)||(13279265-13279315)
chr7 (172-222)||(19410591-19410641)
chr7 (172-222)||(24205278-24205328)
chr7 (172-222)||(24206796-24206846)
chr7 (170-227)||(16902182-16902238)
chr7 (173-221)||(23784663-23784711)
chr7 (172-227)||(13279339-13279394)
chr7 (172-227)||(19272298-19272353)
chr7 (175-222)||(35913210-35913257)
chr7 (172-227)||(38193041-38193096)
chr7 (172-227)||(43251590-43251644)
chr7 (172-222)||(12814672-12814722)
chr7 (173-227)||(21298095-21298148)
chr7 (180-222)||(21298171-21298213)
chr7 (172-222)||(38193122-38193171)
chr7 (172-225)||(19979730-19979782)
chr7 (182-227)||(20040991-20041036)
chr7 (173-222)||(24555786-24555834)
chr7 (182-227)||(44569002-44569046)
chr7 (170-222)||(19272377-19272429)
chr7 (170-222)||(39118955-39119007)
chr7 (175-227)||(48104651-48104702)
chr7 (172-227)||(3951528-3951582)
chr7 (172-219)||(5021711-5021757)
chr7 (170-201)||(23314802-23314833)
chr7 (170-201)||(24204892-24204923)
chr7 (172-227)||(26930788-26930842)
chr7 (172-222)||(34857662-34857710)
chr7 (175-222)||(48104585-48104631)
chr7 (172-202)||(1693399-1693429)
chr7 (176-222)||(4518027-4518073)
chr7 (172-202)||(13638119-13638149)
chr7 (172-202)||(13701806-13701836)
chr7 (172-222)||(16902265-16902314)
chr7 (172-202)||(19410699-19410729)
chr7 (172-222)||(26050332-26050382)
chr7 (172-222)||(26059691-26059741)
chr7 (172-202)||(26930714-26930744)
chr7 (175-223)||(34857739-34857786)
chr7 (175-222)||(44414009-44414054)
[»] scaffold0450 (2 HSPs)
scaffold0450 (172-227)||(8017-8072)
scaffold0450 (175-222)||(7944-7991)
[»] chr8 (35 HSPs)
chr8 (172-227)||(7988945-7989000)
chr8 (173-227)||(14329522-14329576)
chr8 (172-227)||(8307943-8307998)
chr8 (171-221)||(43945328-43945378)
chr8 (173-222)||(25601795-25601844)
chr8 (172-227)||(27198224-27198280)
chr8 (172-227)||(8388197-8388252)
chr8 (172-227)||(12330413-12330467)
chr8 (172-227)||(25601870-25601925)
chr8 (172-227)||(40770606-40770661)
chr8 (172-222)||(27198302-27198352)
chr8 (176-222)||(27987457-27987502)
chr8 (176-222)||(28044759-28044804)
chr8 (172-221)||(960351-960399)
chr8 (170-227)||(3900167-3900223)
chr8 (182-227)||(25277564-25277609)
chr8 (182-227)||(27543483-27543528)
chr8 (173-222)||(34019052-34019100)
chr8 (182-227)||(41565363-41565408)
chr8 (172-221)||(43121159-43121208)
chr8 (182-227)||(43400761-43400806)
chr8 (175-227)||(4105203-4105254)
chr8 (175-227)||(9513882-9513933)
chr8 (173-221)||(29726185-29726233)
chr8 (175-227)||(38500435-38500487)
chr8 (175-222)||(4105131-4105177)
chr8 (172-227)||(4482201-4482256)
chr8 (172-222)||(12330495-12330543)
chr8 (172-202)||(2696681-2696711)
chr8 (172-221)||(26447513-26447560)
chr8 (172-222)||(38500364-38500414)
chr8 (182-227)||(3912343-3912388)
chr8 (170-227)||(34985198-34985254)
chr8 (185-226)||(42406313-42406354)
chr8 (182-222)||(27543551-27543591)
[»] chr6 (26 HSPs)
chr6 (172-227)||(30245986-30246041)
chr6 (172-222)||(4840764-4840814)
chr6 (173-227)||(7576157-7576211)
chr6 (177-227)||(13357440-13357490)
chr6 (172-222)||(24062323-24062373)
chr6 (172-222)||(33561885-33561935)
chr6 (172-227)||(3593495-3593550)
chr6 (172-227)||(12321103-12321158)
chr6 (172-222)||(13357514-13357564)
chr6 (174-227)||(9286355-9286407)
chr6 (182-227)||(17156948-17156993)
chr6 (173-209)||(33561806-33561842)
chr6 (172-227)||(1319271-1319326)
chr6 (173-208)||(5334724-5334759)
chr6 (172-227)||(10827144-10827199)
chr6 (175-222)||(29942373-29942420)
chr6 (172-202)||(1319195-1319225)
chr6 (185-227)||(16206882-16206923)
chr6 (172-209)||(3593420-3593457)
chr6 (175-227)||(5953312-5953362)
chr6 (172-201)||(12321029-12321058)
chr6 (182-227)||(25400633-25400677)
chr6 (170-227)||(29964575-29964631)
chr6 (182-227)||(31851850-31851894)
chr6 (182-222)||(19325765-19325805)
chr6 (175-222)||(30245918-30245966)
[»] chr5 (42 HSPs)
chr5 (172-227)||(20688875-20688930)
chr5 (172-227)||(31861571-31861626)
chr5 (172-222)||(31861653-31861703)
chr5 (5-45)||(26835046-26835086)
chr5 (172-227)||(9227006-9227061)
chr5 (173-227)||(24329438-24329492)
chr5 (173-221)||(12330935-12330983)
chr5 (172-227)||(21148878-21148934)
chr5 (173-225)||(39153469-39153521)
chr5 (182-225)||(16304968-16305011)
chr5 (172-227)||(21149022-21149077)
chr5 (172-227)||(22551671-22551724)
chr5 (172-227)||(36354706-36354761)
chr5 (177-227)||(711324-711374)
chr5 (172-222)||(9226930-9226980)
chr5 (173-227)||(26035005-26035058)
chr5 (172-222)||(39153551-39153601)
chr5 (172-222)||(40339411-40339460)
chr5 (172-222)||(42119217-42119266)
chr5 (182-227)||(33658962-33659007)
chr5 (174-227)||(35798605-35798658)
chr5 (172-227)||(37204830-37204886)
chr5 (174-222)||(12382908-12382956)
chr5 (175-227)||(20698443-20698494)
chr5 (5-45)||(26745996-26746036)
chr5 (179-227)||(29754135-29754183)
chr5 (170-222)||(39418879-39418930)
chr5 (175-226)||(18229804-18229854)
chr5 (172-227)||(33052971-33053026)
chr5 (185-227)||(5718382-5718424)
chr5 (172-222)||(20688958-20689007)
chr5 (172-202)||(33052897-33052927)
chr5 (172-202)||(37204927-37204957)
chr5 (182-227)||(10976669-10976714)
chr5 (170-199)||(11664150-11664179)
chr5 (172-201)||(22642199-22642228)
chr5 (173-222)||(24098592-24098640)
chr5 (182-222)||(5718317-5718357)
chr5 (172-227)||(24098513-24098566)
chr5 (182-222)||(26034938-26034978)
chr5 (170-222)||(33483052-33483104)
chr5 (173-209)||(41797677-41797713)
[»] chr3 (36 HSPs)
chr3 (172-227)||(30271624-30271679)
chr3 (173-227)||(3548277-3548331)
chr3 (172-222)||(30586244-30586294)
chr3 (173-227)||(49872871-49872925)
chr3 (172-227)||(29313866-29313921)
chr3 (172-226)||(5417190-5417244)
chr3 (173-227)||(8355488-8355542)
chr3 (173-227)||(27432741-27432795)
chr3 (172-226)||(30586320-30586374)
chr3 (172-222)||(49872796-49872845)
chr3 (170-227)||(19623932-19623989)
chr3 (174-227)||(25109984-25110037)
chr3 (174-222)||(3548204-3548252)
chr3 (170-222)||(5416139-5416190)
chr3 (173-221)||(51252130-51252178)
chr3 (172-227)||(22949327-22949382)
chr3 (172-222)||(7584327-7584376)
chr3 (172-222)||(12767095-12767144)
chr3 (173-227)||(27760444-27760497)
chr3 (172-222)||(30271705-30271755)
chr3 (175-209)||(32012014-32012048)
chr3 (172-222)||(51252210-51252260)
chr3 (182-227)||(5205275-5205320)
chr3 (170-222)||(25109909-25109959)
chr3 (172-221)||(27760369-27760418)
chr3 (182-226)||(27521613-27521657)
chr3 (171-227)||(43767739-43767794)
chr3 (175-227)||(46902025-46902077)
chr3 (174-221)||(10979928-10979974)
chr3 (172-227)||(12767017-12767071)
chr3 (185-227)||(10521761-10521802)
chr3 (185-227)||(10668001-10668043)
chr3 (172-202)||(22949429-22949459)
chr3 (172-222)||(36867716-36867766)
chr3 (173-222)||(14248742-14248791)
chr3 (182-222)||(49880594-49880634)
[»] chr1 (41 HSPs)
chr1 (172-227)||(27794438-27794493)
chr1 (172-227)||(28724451-28724506)
chr1 (172-227)||(29018518-29018573)
chr1 (172-227)||(5330500-5330555)
chr1 (172-222)||(4646838-4646888)
chr1 (172-222)||(5330581-5330631)
chr1 (172-222)||(5348296-5348346)
chr1 (173-227)||(21853921-21853975)
chr1 (172-222)||(36343313-36343363)
chr1 (182-227)||(10027847-10027892)
chr1 (172-227)||(5348215-5348271)
chr1 (170-222)||(13154658-13154709)
chr1 (170-222)||(28724374-28724426)
chr1 (172-219)||(36343236-36343283)
chr1 (173-227)||(2059349-2059402)
chr1 (173-227)||(7112575-7112629)
chr1 (172-222)||(27794520-27794570)
chr1 (173-227)||(30434402-30434455)
chr1 (172-222)||(31532417-31532467)
chr1 (172-209)||(2059274-2059311)
chr1 (172-221)||(16699033-16699081)
chr1 (182-227)||(18458726-18458771)
chr1 (172-209)||(35167948-35167985)
chr1 (173-226)||(42736745-42736798)
chr1 (175-227)||(35034218-35034269)
chr1 (173-227)||(47021993-47022044)
chr1 (172-227)||(4646915-4646970)
chr1 (172-219)||(6540799-6540846)
chr1 (172-202)||(9043621-9043651)
chr1 (172-222)||(15336436-15336486)
chr1 (172-202)||(21853467-21853497)
chr1 (172-222)||(28411074-28411124)
chr1 (183-225)||(31955413-31955455)
chr1 (172-222)||(42736669-42736719)
chr1 (185-227)||(42847669-42847711)
chr1 (172-222)||(44826243-44826292)
chr1 (182-227)||(44826170-44826215)
chr1 (173-222)||(51904060-51904109)
chr1 (172-200)||(7112671-7112699)
chr1 (182-222)||(33573805-33573845)
chr1 (172-200)||(46561465-46561493)
[»] scaffold0041 (1 HSPs)
scaffold0041 (173-227)||(38130-38183)
[»] chr2 (37 HSPs)
chr2 (172-226)||(28484439-28484493)
chr2 (170-227)||(16577193-16577250)
chr2 (175-227)||(37147634-37147686)
chr2 (172-227)||(3364483-3364538)
chr2 (172-227)||(25227980-25228035)
chr2 (172-227)||(25926964-25927018)
chr2 (172-222)||(28149514-28149564)
chr2 (172-222)||(30371465-30371515)
chr2 (172-227)||(85520-85574)
chr2 (175-222)||(25227908-25227955)
chr2 (171-222)||(37147712-37147763)
chr2 (172-227)||(39227874-39227928)
chr2 (172-222)||(12693655-12693705)
chr2 (173-227)||(28149589-28149642)
chr2 (172-222)||(38386089-38386139)
chr2 (173-222)||(1498967-1499015)
chr2 (173-222)||(9011911-9011960)
chr2 (173-222)||(22535610-22535659)
chr2 (175-227)||(22535535-22535586)
chr2 (179-227)||(30371534-30371582)
chr2 (170-222)||(39227954-39228006)
chr2 (172-227)||(17328172-17328227)
chr2 (175-222)||(19052099-19052146)
chr2 (172-227)||(19493401-19493455)
chr2 (184-227)||(43302036-43302079)
chr2 (172-222)||(3364406-3364456)
chr2 (172-222)||(17328252-17328302)
chr2 (185-227)||(20182352-20182394)
chr2 (172-202)||(23260399-23260429)
chr2 (182-227)||(7894121-7894166)
chr2 (174-227)||(9011838-9011890)
chr2 (172-221)||(29098177-29098226)
chr2 (182-227)||(34635797-34635842)
chr2 (182-222)||(18555668-18555708)
chr2 (182-226)||(18555732-18555775)
chr2 (172-200)||(29098098-29098126)
chr2 (182-222)||(34635868-34635908)
[»] scaffold0031 (2 HSPs)
scaffold0031 (173-222)||(1985-2034)
scaffold0031 (173-227)||(1909-1959)
[»] scaffold0809 (2 HSPs)
scaffold0809 (172-227)||(3921-3975)
scaffold0809 (172-222)||(3846-3896)
[»] scaffold0727 (1 HSPs)
scaffold0727 (172-227)||(912-966)
[»] scaffold0079 (1 HSPs)
scaffold0079 (175-225)||(6902-6952)
[»] scaffold0032 (1 HSPs)
scaffold0032 (170-227)||(91203-91260)
[»] scaffold0740 (1 HSPs)
scaffold0740 (175-227)||(3729-3781)
[»] scaffold0416 (1 HSPs)
scaffold0416 (5-45)||(6475-6515)
[»] scaffold0010 (2 HSPs)
scaffold0010 (170-222)||(26462-26514)
scaffold0010 (175-227)||(26390-26441)
[»] scaffold0384 (1 HSPs)
scaffold0384 (172-227)||(4352-4407)
[»] scaffold0113 (2 HSPs)
scaffold0113 (172-227)||(28806-28860)
scaffold0113 (172-202)||(28151-28181)
[»] scaffold0759 (1 HSPs)
scaffold0759 (7-45)||(2721-2759)
[»] scaffold0026 (1 HSPs)
scaffold0026 (175-227)||(4585-4636)
[»] scaffold0233 (1 HSPs)
scaffold0233 (7-41)||(17966-18000)
[»] scaffold0769 (2 HSPs)
scaffold0769 (182-227)||(4072-4117)
scaffold0769 (182-222)||(4006-4046)
[»] scaffold0092 (1 HSPs)
scaffold0092 (185-222)||(44512-44548)


Alignment Details
Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 16482264 - 16482209
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  16482264 ctgtaaaatatttttgttttgatttacccccataataggttaaacaaaaacgaaaa 16482209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 18454275 - 18454329
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  18454275 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 18454329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 45900761 - 45900707
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  45900761 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 45900707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 53231855 - 53231909
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||||||||||    
T  53231855 tgtaaaatatttttgttttcatttacccccctaataggctaaacaaaaacgaaaa 53231909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 1386215 - 1386160
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||| |||||||||| |||||| | |||||||||||||||    
T  1386215 ctgtaaaatatttttgttttaatttacccccctaataggccaaacaaaaacgaaaa 1386160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 22273010 - 22273064
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||||||||    
T  22273010 ctgtaaaatatttttgttttgattta-ccccataataggccaaacaaaaacgaaaa 22273064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 56467494 - 56467548
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  56467494 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaacgaaaa 56467548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 16493698 - 16493645
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaa 225  Q
    ||||||||||||||||||||||||||||||| ||||||   |||||||||||||    
T  16493698 ctgtaaaatatttttgttttgatttacccccttaataggtcaaacaaaaacgaa 16493645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 51965451 - 51965504
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaa 226  Q
    ||||||||||||||||||||||||||| || |||||| | ||||||||||||||    
T  51965451 tgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaacgaaa 51965504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 16482133 - 16482185
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||| |||||||||||||||||||||||| |||||||  ||||||||||    
T  16482133 ctctgtaagatatttttgttttgatttacccccctaatagagcaaacaaaaac 16482185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 43751125 - 43751180
Alignment:
Q  171 tctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||| |||| |||||| | |||||||||||||||    
T  43751125 tctgtaaaatatttttgttttgattta-ccccttaataggccaaacaaaaacgaaaa 43751180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 44519541 - 44519592
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||||||    
T  44519541 taaaatatttttgttttgattta-ccccataataggccaaacaaaaacgaaaa 44519592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 15157052 - 15156997
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||| |||| |||||| | ||||||||| |||||    
T  15157052 ctgtaaaatatttttgttttgatttaaccccttaataggccaaacaaaaatgaaaa 15156997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 17289823 - 17289877
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | || ||||||||||||    
T  17289823 ctgtaaaatatttttgttttgatttaccccc-taataggccaatcaaaaacgaaaa 17289877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 21780332 - 21780278
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||| |||||||||||||||| |||||| | |||||||||||||||    
T  21780332 ctgtaaaatattttggttttgatttaccccc-taataggccaaacaaaaacgaaaa 21780278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 21798543 - 21798489
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||| |||||||| |||||| | |||||||||||||||    
T  21798543 ctgtaaaatatttttgttttga-ttacccccctaataggccaaacaaaaacgaaaa 21798489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 39868548 - 39868602
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| ||||||   |||||||||||||||    
T  39868548 ctgtaaaatatttttgttttgatttaccccc-taatagggcaaacaaaaacgaaaa 39868602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 9791621 - 9791572
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  9791621 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 9791572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 16493598 - 16493644
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaa 218  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||    
T  16493598 ctgtaaaatatttttgttttgatttacccccttaataggccaaacaa 16493644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 17289953 - 17289903
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||| ||| |||||| | ||||||||||    
T  17289953 ctgtaaaatatttttgttttgatttacgcccctaataggccaaacaaaaac 17289903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 21798413 - 21798462
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  21798413 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 21798462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 29431502 - 29431540
Alignment:
Q  189 tttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  29431502 tttgatttacccccctaatagactaaacaaaaacgaaaa 29431540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 43751256 - 43751207
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  43751256 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 43751207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 5401853 - 5401898
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  5401853 tttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 5401898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 6439265 - 6439302
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatag 209  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  6439265 ctgtaaaatatttttgttttgatttacccccctaatag 6439302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 10682762 - 10682799
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatag 209  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  10682762 ctgtaaaatatttttgttttgatttacccccttaatag 10682799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 10717989 - 10718026
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatag 209  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  10717989 ctgtaaaatatttttgttttgatttacccccttaatag 10718026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 10896402 - 10896439
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatag 209  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  10896402 ctgtaaaatatttttgttttgatttacccccttaatag 10896439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 10931758 - 10931795
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatag 209  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  10931758 ctgtaaaatatttttgttttgatttacccccttaatag 10931795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 11563377 - 11563426
Alignment:
Q  177 aaatatttttgttttgatttacccccataatagactaaacaaaaacgaaa 226  Q
    |||||||||||||||||||||||||| |||||| | ||||||||| ||||    
T  11563377 aaatatttttgttttgatttacccccctaataggccaaacaaaaatgaaa 11563426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 18320672 - 18320619
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaa 226  Q
    |||||||||||||||| ||||||||||||| |||||| | |||| |||||||||    
T  18320672 tgtaaaatatttttgtcttgatttacccccctaataggccaaaccaaaacgaaa 18320619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 24215705 - 24215660
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||    
T  24215705 tttttgttttgatttacccccttaataaaccaaacaaaaacgaaaa 24215660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 51396239 - 51396291
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||||   |||||| | |||||||||||||||    
T  51396239 ctgtaaaatatttttgttttgatttaccc---taataggccaaacaaaaacgaaaa 51396291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 56467624 - 56467576
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||    
T  56467624 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaa 56467576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 13334905 - 13334951
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaa 220  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||    
T  13334905 tgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaa 13334951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 47321065 - 47321119
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||| |||| |||||| | |||||||||| ||||    
T  47321065 ctgtaaaatatttttgttttgattta-ccccttaataggccaaacaaaaacaaaaa 47321119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 56216919 - 56216873
Alignment:
Q  174 gtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    ||||||||||||||||||||||||||||| |||||| | |||||||||    
T  56216919 gtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaa 56216873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 9001524 - 9001554
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  9001524 ctgtaaaatatttttgttttgatttaccccc 9001554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 10682894 - 10682864
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  10682894 ctgtaaaatatttttgttttgatttaccccc 10682864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 10896534 - 10896504
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  10896534 ctgtaaaatatttttgttttgatttaccccc 10896504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 17313037 - 17313007
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  17313037 ctgtaaaatatttttgttttgatttaccccc 17313007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 18320542 - 18320592
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||| | | |||||| | ||||||||||    
T  18320542 ctgtaaaatatttttgttttgatttactctcctaataggccaaacaaaaac 18320592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 18454405 - 18454356
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||| ||||||||| |||||| | ||||||||||    
T  18454405 ctgtaaaatatttttgttttgctttaccccc-taataggccaaacaaaaac 18454356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 19875947 - 19875894
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||| || |||||||||||||||||| |||||| | |||||||||||||||    
T  19875947 tgtaaaattttattgttttgatttaccccc-taataggccaaacaaaaacgaaaa 19875894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 44519667 - 44519622
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||    
T  44519667 taaaatatttttgttttgatttaccccc-taataggccaaacaaaaa 44519622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 45900601 - 45900631
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  45900601 ctgtaaaatatttttgttttgatttaccccc 45900631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 45900631 - 45900661
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  45900631 ctgtaaaatatttttgttttgatttaccccc 45900661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 27579710 - 27579666
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  27579710 tttttgttttgatttaccccc-taataggccaaacaaaaacgaaaa 27579666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 37273402 - 37273351
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||| ||| |||||| | ||||||||| |||||    
T  37273402 taaaatatttttgttttgatttacaccc-taataggccaaacaaaaatgaaaa 37273351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 31186883 - 31186831
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  31186883 ctctgtaaaatatttttgttttgatttacccccctaatagaccaaacaaaaac 31186831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 1693298 - 1693353
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  1693298 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 1693353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 31186749 - 31186804
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  31186749 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 31186804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 13286841 - 13286791
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  13286841 ctgtaaaatatttttgttttgatttacccccctaataggctaaacaaaaac 13286791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 13286710 - 13286765
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||| |||||||||||||||||||||| | |||||||||| ||||    
T  13286710 ctgtaaaatatttttcttttgatttacccccataataggccaaacaaaaacaaaaa 13286765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 15037308 - 15037363
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||| |||||    
T  15037308 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaatgaaaa 15037363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 23371657 - 23371603
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  23371657 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaacgaaaa 23371603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 23784790 - 23784735
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||| | |||||||  |||||||||||||||    
T  23784790 ctgtaaaatatttttgttttgatttaccctcttaatagaacaaacaaaaacgaaaa 23784735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 26050253 - 26050307
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  26050253 ctgtaaaatatttttgttttgatttaccccc-taataggcaaaacaaaaacgaaaa 26050307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 26059612 - 26059666
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  26059612 ctgtaaaatatttttgttttgatttaccccc-taataggcaaaacaaaaacgaaaa 26059666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 45163997 - 45164048
Alignment:
Q  176 aaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  45163997 aaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 45164048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 13279265 - 13279315
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  13279265 ctgtaaaatatttttgttttgatttacccccttaataggccaaacaaaaac 13279315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 19410591 - 19410641
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  19410591 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 19410641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 24205328 - 24205278
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  24205328 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 24205278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 24206846 - 24206796
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  24206846 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 24206796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 16902182 - 16902238
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||||| | |||| | |||||||||||||||    
T  16902182 ctctgtaaaatatttttgttttgatttaccccc-ttataggccaaacaaaaacgaaaa 16902238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 23784663 - 23784711
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||||    
T  23784663 tgtaaaatatttttgttttaatttacccccctaatagaccaaacaaaaa 23784711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 13279394 - 13279339
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||| || |||||| | ||||||| |||||||    
T  13279394 ctgtaaaatatttttgttttgatttaccgccctaataggccaaacaaacacgaaaa 13279339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 19272298 - 19272353
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||| |||||||||| |||||||||| |||||| | |||||||||||||||    
T  19272298 ctgtaaaatttttttgttttaatttacccccctaataggccaaacaaaaacgaaaa 19272353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 35913257 - 35913210
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||| |||||| | ||||||||||    
T  35913257 taaaatatttttgttttgatttacccccttaataggccaaacaaaaac 35913210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 38193041 - 38193096
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||  |||||| | ||| |||||||||||    
T  38193041 ctgtaaaatatttttgttttgatttacccctctaataggccaaagaaaaacgaaaa 38193096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 43251590 - 43251644
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||| |||| |||||| | |||||||||||||||    
T  43251590 ctgtaaaatatttttgttttgattta-ccccttaataggccaaacaaaaacgaaaa 43251644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 12814672 - 12814722
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||| ||||||||||||||||||||| |||||| | ||||||||||    
T  12814672 ctgtaaaatgtttttgttttgatttacccccttaataggccaaacaaaaac 12814722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 21298095 - 21298148
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||    
T  21298095 tgtaaaatatttttgttttaatttaccccca-aataagctaaacaaaaacgaaaa 21298148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 21298213 - 21298171
Alignment:
Q  180 tatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||| |||||| ||||||||||||    
T  21298213 tatttttgttttgatttacccccttaataggctaaacaaaaac 21298171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 38193171 - 38193122
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  38193171 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 38193122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 19979730 - 19979782
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaa 225  Q
    |||||||||||||||||||||||||| |||| |||||| | |||||||||||||    
T  19979730 ctgtaaaatatttttgttttgattta-ccccttaataggccaaacaaaaacgaa 19979782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 20040991 - 20041036
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  20040991 tttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 20041036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 24555786 - 24555834
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  24555786 tgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 24555834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 44569046 - 44569002
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  44569046 tttttgttttgatttaccccc-taatagaccaaacaaaaacgaaaa 44569002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 19272429 - 19272377
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||| |||||||||||| ||||||||||||||| |||||| | ||||||||||    
T  19272429 ctctataaaatatttttattttgatttacccccctaataggccaaacaaaaac 19272377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 39118955 - 39119007
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||| || | |||||| | ||||||||||    
T  39118955 ctctgtaaaatatttttgttttgatttatccgcctaataggccaaacaaaaac 39119007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 48104702 - 48104651
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||| |||||| | ||| |||||||||||    
T  48104702 taaaatatttttgttttgatttaccccc-taataggccaaaaaaaaacgaaaa 48104651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 3951582 - 3951528
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||| ||||||||||||||||||||| |||||| | |||||||||| ||||    
T  3951582 ctgtaaaatctttttgttttgatttaccccc-taataggccaaacaaaaacaaaaa 3951528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 5021757 - 5021711
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaa 219  Q
    |||||||||||||||||||||||||||| || ||||||| ||||||||    
T  5021757 ctgtaaaatatttttgttttgatttacctcc-taatagattaaacaaa 5021711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 201
Target Start/End: Original strand, 23314802 - 23314833
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccc 201  Q
    ||||||||||||||||||||||||||||||||    
T  23314802 ctctgtaaaatatttttgttttgatttacccc 23314833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 201
Target Start/End: Original strand, 24204892 - 24204923
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccc 201  Q
    ||||||||||||||||||||||||||||||||    
T  24204892 ctctgtaaaatatttttgttttgatttacccc 24204923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 26930842 - 26930788
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||| |||||||||||| |||||| |||||| | |||||||||||||||    
T  26930842 ctgtaaaatatatttgttttgattaaccccc-taataggccaaacaaaaacgaaaa 26930788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 34857662 - 34857710
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||  |||||| | ||||||||||    
T  34857662 ctgtaaaatatttttgttttgatttacccc--taataggccaaacaaaaac 34857710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 48104585 - 48104631
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||| |||||| | ||||||||||    
T  48104585 taaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 48104631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 1693429 - 1693399
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  1693429 ctgtaaaatatttttgttttgatttaccccc 1693399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 4518073 - 4518027
Alignment:
Q  176 aaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||| | |||||| | ||||||||||    
T  4518073 aaaatatttttgttttgatttacccacctaataggccaaacaaaaac 4518027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 13638119 - 13638149
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  13638119 ctgtaaaatatttttgttttgatttaccccc 13638149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 13701806 - 13701836
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  13701806 ctgtaaaatatttttgttttgatttaccccc 13701836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 16902314 - 16902265
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||| |||||||||||||| |||||| | ||||||||||    
T  16902314 ctgtaaaatatttttgctttgatttaccccc-taataggccaaacaaaaac 16902265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 19410729 - 19410699
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  19410729 ctgtaaaatatttttgttttgatttaccccc 19410699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 26050382 - 26050332
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||| ||||||||||| |||||||| |||||| | ||||||||||    
T  26050382 ctgtaaaatacttttgttttgaattacccccctaataggccaaacaaaaac 26050332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 26059741 - 26059691
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||| ||||||||||| |||||||| |||||| | ||||||||||    
T  26059741 ctgtaaaatacttttgttttgaattacccccctaataggccaaacaaaaac 26059691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 26930714 - 26930744
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  26930714 ctgtaaaatatttttgttttgatttaccccc 26930744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 34857786 - 34857739
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacg 223  Q
    |||||||||||||||||||||||  | |||||||| |||||||||||||    
T  34857786 taaaatatttttgttttgattta-tctcataataggctaaacaaaaacg 34857739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 44414054 - 44414009
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||  |||||| | ||||||||||    
T  44414054 taaaatatttttgttttgatttacccc--taataggccaaacaaaaac 44414009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 8072 - 8017
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  8072 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 8017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 7944 - 7991
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||    
T  7944 taaaatatttttgttttgatttacccccataataggtcaaacaaaaac 7991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 3e-16; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 7989000 - 7988945
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  7989000 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 7988945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 14329576 - 14329522
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  14329576 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 14329522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 8307943 - 8307998
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||| |||||    
T  8307943 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaatgaaaa 8307998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 43945378 - 43945328
Alignment:
Q  171 tctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    |||||||||||||||||||||||||||||||| |||||| | |||||||||    
T  43945378 tctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaa 43945328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 25601795 - 25601844
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  25601795 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 25601844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 27198224 - 27198280
Alignment:
Q  172 ctgtaaaatatttt-tgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||| ||||||||||||||||| |||||| | |||||||||||||||    
T  27198224 ctgtaaaatattttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 27198280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 8388197 - 8388252
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||  |||||| | ||||||||| |||||    
T  8388197 ctgtaaaatatttttgttttgatttacccctctaataggccaaacaaaaatgaaaa 8388252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 12330413 - 12330467
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||| |||||    
T  12330413 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaatgaaaa 12330467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 25601925 - 25601870
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||  | ||||||||| |||||    
T  25601925 ctgtaaaatatttttgttttgatttacccccctaatatgccaaacaaaaatgaaaa 25601870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 40770606 - 40770661
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||| ||||||| |||| || |||||| |||||||||||||||||    
T  40770606 ctgtaaaatatttttattttgatataccaccttaataggctaaacaaaaacgaaaa 40770661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 27198352 - 27198302
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||  | ||||||||||    
T  27198352 ctgtaaaatatttttgttttgatttacccccctaatatgccaaacaaaaac 27198302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 27987502 - 27987457
Alignment:
Q  176 aaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  27987502 aaaatatttttgttttgatttaccccc-taatagaccaaacaaaaac 27987457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 28044804 - 28044759
Alignment:
Q  176 aaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  28044804 aaaatatttttgttttgatttaccccc-taatagaccaaacaaaaac 28044759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 960351 - 960399
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||    
T  960351 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaa 960399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 3900167 - 3900223
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||||| ||||||   |||| ||||||||||    
T  3900167 ctctgtaaaatatttttgttttgatttaccccc-taataggtcaaacgaaaacgaaaa 3900223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 25277564 - 25277609
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  25277564 tttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 25277609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 27543483 - 27543528
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  27543483 tttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 27543528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 34019100 - 34019052
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  34019100 tgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 34019052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 41565363 - 41565408
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  41565363 tttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 41565408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 43121159 - 43121208
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    ||||||||||||||||||||||||||| ||| |||||| | |||||||||    
T  43121159 ctgtaaaatatttttgttttgatttactcccctaataggccaaacaaaaa 43121208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 43400761 - 43400806
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  43400761 tttttgttttgatttacccccttaataggccaaacaaaaacgaaaa 43400806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 4105254 - 4105203
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||| || |||||| | |||||||||||||||    
T  4105254 taaaatatttttgttttgatttacctcc-taataggccaaacaaaaacgaaaa 4105203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 9513882 - 9513933
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||| |||||    
T  9513882 taaaatatttttattttgatttaccccc-taatagaccaaacaaaaatgaaaa 9513933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 29726185 - 29726233
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    ||||||||||||||| |||||||||||||| |||||| | |||||||||    
T  29726185 tgtaaaatatttttggtttgatttacccccctaataggccaaacaaaaa 29726233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 38500487 - 38500435
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||| |||||||  |||||| | |||||||||||||||    
T  38500487 taaaatatttttgttttgaattacccctctaataggccaaacaaaaacgaaaa 38500435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 4105131 - 4105177
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||| |||||| | ||||||||||    
T  4105131 taaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 4105177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 4482256 - 4482201
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||| || |||||||||||||||||| |||||  | |||||||||||||||    
T  4482256 ctgtaaaattttattgttttgatttacccccctaataagccaaacaaaaacgaaaa 4482201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 12330543 - 12330495
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||  |||||| | ||||||||||    
T  12330543 ctgtaaaatatttttgttttgatttacccc--taataggccaaacaaaaac 12330495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 2696681 - 2696711
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  2696681 ctgtaaaatatttttgttttgatttaccccc 2696711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 26447560 - 26447513
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    ||||||||||||||||||||||||||||||  |||||| | |||||||||    
T  26447560 ctgtaaaatatttttgttttgatttacccc--taataggccaaacaaaaa 26447513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 38500364 - 38500414
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||| || |||| |||||| | ||||||||||    
T  38500364 ctgtaaaatatttttgttttgatctatccccttaataggccaaacaaaaac 38500414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 3912343 - 3912388
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||  | |||||||||||||||    
T  3912343 tttttgttttgatttacccccctaataagccaaacaaaaacgaaaa 3912388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 34985198 - 34985254
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||| ||||||| ||||||||||| |||||| | ||| |||||||||||    
T  34985198 ctctgtaaaatatgtttgtttggatttaccccc-taataggccaaataaaaacgaaaa 34985254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 42406313 - 42406354
Alignment:
Q  185 ttgttttgatttacccccataatagactaaacaaaaacgaaa 226  Q
    |||||||||||||||||| |||||| | ||||||||||||||    
T  42406313 ttgttttgatttacccccctaataggccaaacaaaaacgaaa 42406354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 27543591 - 27543551
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||| |||||| | ||||||||||    
T  27543591 tttttgttttgatttacccccctaataggccaaacaaaaac 27543551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 30246041 - 30245986
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  30246041 ctgtaaaatattttagttttgatttacccccataataggccaaacaaaaacgaaaa 30245986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 4840764 - 4840814
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| ||||||    
T  4840764 ctgtaaaatatttttgttttgatttacccccttaatagaccaaataaaaac 4840814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 7576157 - 7576211
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||| |||||||    
T  7576157 tgtaaaatatttttgttttaatttaccctcctaatagactaaacaaagacgaaaa 7576211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 13357440 - 13357490
Alignment:
Q  177 aaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  13357440 aaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 13357490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 24062373 - 24062323
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  24062373 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 24062323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 33561935 - 33561885
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  33561935 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 33561885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 3593550 - 3593495
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||| |||||||||||||||||||||||||| |||| | | |||||||||||||||    
T  3593550 ctgttaaatatttttgttttgatttacccccctaatcggccaaacaaaaacgaaaa 3593495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 12321158 - 12321103
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||| | | ||||||||| |||||    
T  12321158 ctgtaaaatatttttgttttgatttacccccctaattggccaaacaaaaatgaaaa 12321103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 13357564 - 13357514
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||| ||| |||||| | ||||||||||    
T  13357564 ctgtaaaatatttttgttttgatttacgcccctaataggccaaacaaaaac 13357514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 9286407 - 9286355
Alignment:
Q  174 gtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||| |||||| |||||| | |||||||||||||||    
T  9286407 gtaaaatatttttgttttgattcaccccc-taataggccaaacaaaaacgaaaa 9286355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 17156993 - 17156948
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||    
T  17156993 tttttgttttgatttatctccataatagaccaaacaaaaacgaaaa 17156948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 33561806 - 33561842
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatag 209  Q
    |||||||||||||||||||||||||||||| ||||||    
T  33561806 tgtaaaatatttttgttttgatttacccccctaatag 33561842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 1319326 - 1319271
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||| ||||| |||||||| ||||||||||| |||||| | |||||||||||||||    
T  1319326 ctgttaaatacttttgtttcgatttacccccctaataggccaaacaaaaacgaaaa 1319271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 5334724 - 5334759
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataata 208  Q
    |||||||||||||||||||||||||||||| |||||    
T  5334724 tgtaaaatatttttgttttgatttacccccctaata 5334759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 10827199 - 10827144
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||| ||||||||||||||||||| | ||||||   |||||||||||||||    
T  10827199 ctgtaaaatgtttttgttttgatttaccctcttaataggtcaaacaaaaacgaaaa 10827144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 29942420 - 29942373
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||| ||||||||||||||| |||||| | ||||||||||    
T  29942420 taaaatatttttattttgatttacccccctaataggccaaacaaaaac 29942373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 1319195 - 1319225
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  1319195 ctgtaaaatatttttgttttgatttaccccc 1319225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 16206923 - 16206882
Alignment:
Q  185 ttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  16206923 ttgttttgatttaccccc-taataggctaaacaaaaacgaaaa 16206882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 3593420 - 3593457
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatag 209  Q
    |||||||||||||||||||||||||||| || ||||||    
T  3593420 ctgtaaaatatttttgttttgatttacctccctaatag 3593457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 5953362 - 5953312
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||| |||||||||||||||   |||||| |||||||||||||||    
T  5953362 taaaatatttttattttgatttaccccc--tatagaccaaacaaaaacgaaaa 5953312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 201
Target Start/End: Original strand, 12321029 - 12321058
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccc 201  Q
    ||||||||||||||||||||||||||||||    
T  12321029 ctgtaaaatatttttgttttgatttacccc 12321058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 25400633 - 25400677
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  25400633 tttttgttttgatttaccccc-taataggccaaacaaaaacgaaaa 25400677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 29964631 - 29964575
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||| |||||||||||||| ||||||||||| | || ||||||| ||||    
T  29964631 ctctgtaaaatatgtttgttttgattta-ccccataataggccaagcaaaaacaaaaa 29964575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 31851850 - 31851894
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  31851850 tttttgttttgatttaccccc-taataggccaaacaaaaacgaaaa 31851894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 19325805 - 19325765
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||| |||||||| ||| ||||||    
T  19325805 tttttgttttgatttacccccctaatagaccaaataaaaac 19325765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 30245918 - 30245966
Alignment:
Q  175 taaaatatttttgttttgattta-cccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||| ||||| |||||| | ||||||||||    
T  30245918 taaaatatttttgttttgatttaccccccctaataggccaaacaaaaac 30245966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 20688875 - 20688930
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  20688875 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 20688930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 31861571 - 31861626
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  31861571 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 31861626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 31861703 - 31861653
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  31861703 ctgtaaaatatttttgttttgatttacccccctaataggctaaacaaaaac 31861653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 26835046 - 26835086
Alignment:
Q  5 catgtacatgggtgtggtgattttgactcgtacattactcg 45  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26835046 catgtacatgggtgtggtgattttgactcgtacattactcg 26835086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 9227061 - 9227006
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||| |||||    
T  9227061 ctgtaaaatatttttgttttgatttacccccttaataggttaaacaaaaatgaaaa 9227006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 24329492 - 24329438
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||| ||||||||   |||||||||||||||    
T  24329492 tgtaaaatatttttgttttgatttaccctcataataggtcaaacaaaaacgaaaa 24329438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 12330935 - 12330983
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||    
T  12330935 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaa 12330983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 21148878 - 21148934
Alignment:
Q  172 ctgtaaaatatttttgttttgattta-cccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||    
T  21148878 ctgtaaaatatttttgttttgatttatcccccttaataggccaaacaaaaacgaaaa 21148934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 39153469 - 39153521
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaa 225  Q
    ||||||||||||||||||||||||| |||| |||||| | |||||||||||||    
T  39153469 tgtaaaatatttttgttttgatttatccccctaataggccaaacaaaaacgaa 39153521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 16304968 - 16305011
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaa 225  Q
    ||||||||||||||||||||| |||||| |||||||||||||||    
T  16304968 tttttgttttgatttacccccctaataggctaaacaaaaacgaa 16305011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 21149077 - 21149022
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||| ||| |||||| | |||||||||| ||||    
T  21149077 ctgtaaaatatttttgttttgatttactcccctaataggccaaacaaaaacaaaaa 21149022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 22551724 - 22551671
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||    
T  22551724 ctgtaaaatatttt-gttttgatttacccc-ataataggctaaacaaaaacgaaaa 22551671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 36354761 - 36354706
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||| || |||||| | || ||||||||||||    
T  36354761 ctgtaaaatatttttgttttgatttacctccttaataggccaatcaaaaacgaaaa 36354706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 711324 - 711374
Alignment:
Q  177 aaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||  |||||| | |||||||||||||||    
T  711324 aaatatttttgttttgatttacccctctaataggccaaacaaaaacgaaaa 711374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 9226930 - 9226980
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||| || |||||| | ||||||||||    
T  9226930 ctgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaac 9226980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 26035058 - 26035005
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||| ||||    
T  26035058 tgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaacaaaaa 26035005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 39153601 - 39153551
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||| ||| |||||| | ||||||||||    
T  39153601 ctgtaaaatatttttgttttgatttactcccctaataggccaaacaaaaac 39153551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 40339411 - 40339460
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  40339411 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 40339460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 42119266 - 42119217
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  42119266 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 42119217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 33658962 - 33659007
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  33658962 tttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 33659007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 35798658 - 35798605
Alignment:
Q  174 gtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||| |||  ||||| | |||||||||||||||    
T  35798658 gtaaaatatttttgttttgatttactccctcaataggccaaacaaaaacgaaaa 35798605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 37204830 - 37204886
Alignment:
Q  172 ctgtaaaatatttttgttttgattta-cccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||| ||||| |||||| | ||||||||| |||||    
T  37204830 ctgtaaaatatttttgttttgatttaccccccntaataggccaaacaaaaatgaaaa 37204886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 12382908 - 12382956
Alignment:
Q  174 gtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||| || |||||| | ||||||||||    
T  12382908 gtaaaatatttttgttttgatttacctccctaataggccaaacaaaaac 12382956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 20698494 - 20698443
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||| |||| |||||| | |||||||||||||||    
T  20698494 taaaatatttttgttttgatttagcccc-taataggccaaacaaaaacgaaaa 20698443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 26745996 - 26746036
Alignment:
Q  5 catgtacatgggtgtggtgattttgactcgtacattactcg 45  Q
    |||||||||||||||| ||||||||| ||||||||||||||    
T  26745996 catgtacatgggtgtgatgattttgagtcgtacattactcg 26746036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 29754135 - 29754183
Alignment:
Q  179 atatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||| ||||||||||||||| |||||| | |||||||||||||||    
T  29754135 atatttttattttgatttacccccctaataggccaaacaaaaacgaaaa 29754183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 39418930 - 39418879
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||| |||||||||||||||||||||||||||| |||||| | ||||||||||    
T  39418930 ctctataaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 39418879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 18229804 - 18229854
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaa 226  Q
    |||||||||||||||||||||||||||| |||||| | |||||| |||||||    
T  18229804 taaaatatttttgttttgatttaccccc-taataggccaaacaataacgaaa 18229854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 33053026 - 33052971
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||| |||||||||||||||||||| || || |||||| | |||||||||||||||    
T  33053026 ctgttaaatatttttgttttgatttccctccgtaataggccaaacaaaaacgaaaa 33052971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 5718424 - 5718382
Alignment:
Q  185 ttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||| |||||| | |||||||||||||||    
T  5718424 ttgttttgatttacccccttaataggccaaacaaaaacgaaaa 5718382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 20689007 - 20688958
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||  |||||| | ||||||||||    
T  20689007 ctgtaaaatatttttgttttgatttacccctttaatag-ccaaacaaaaac 20688958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 33052897 - 33052927
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  33052897 ctgtaaaatatttttgttttgatttaccccc 33052927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 37204957 - 37204927
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  37204957 ctgtaaaatatttttgttttgatttaccccc 37204927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 10976714 - 10976669
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| ||||||   |||||||||||||||    
T  10976714 tttttgttttgatttacccccctaataggtcaaacaaaaacgaaaa 10976669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 199
Target Start/End: Original strand, 11664150 - 11664179
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacc 199  Q
    ||||||||||||||||||||||||||||||    
T  11664150 ctctgtaaaatatttttgttttgatttacc 11664179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 201
Target Start/End: Original strand, 22642199 - 22642228
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccc 201  Q
    ||||||||||||||||||||||||||||||    
T  22642199 ctgtaaaatatttttgttttgatttacccc 22642228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 24098640 - 24098592
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||| ||||||| |||||| | ||||||||||    
T  24098640 tgtaaaatatttttgttttgatataccccc-taataggccaaacaaaaac 24098592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 5718317 - 5718357
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||| |||||| | ||||||||||    
T  5718317 tttttgttttgatttacccccctaataggccaaacaaaaac 5718357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 24098513 - 24098566
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||| ||||||||||||||| |||  |||||| | |||||||||||||||    
T  24098513 ctgtaaaataattttgttttgatttatccc--taataggccaaacaaaaacgaaaa 24098566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 26034938 - 26034978
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||| |||||| | ||||||||||    
T  26034938 tttttgttttgatttacccccctaataggccaaacaaaaac 26034978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 33483104 - 33483052
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||| | || ||||||   ||||||||||    
T  33483104 ctctgtaaaatatttttgttttgatttatctccctaataggacaaacaaaaac 33483052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 41797713 - 41797677
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatag 209  Q
    ||||||||||||||||||||||||||| || ||||||    
T  41797713 tgtaaaatatttttgttttgatttacctccctaatag 41797677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 3e-16; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 30271624 - 30271679
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  30271624 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 30271679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 3548331 - 3548277
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  3548331 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 3548277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 30586244 - 30586294
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  30586244 ctgtaaaatatttttgttttgatttacccccctaatagaccaaacaaaaac 30586294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 49872925 - 49872871
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  49872925 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 49872871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 29313866 - 29313921
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||| |||||||||||||||||||||| |||||| | |||||||||||||||    
T  29313866 ctgtaaaacatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 29313921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 5417244 - 5417190
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaa 226  Q
    ||||||||||||||||||||||||||||  | |||||||| ||||||||||||||    
T  5417244 ctgtaaaatatttttgttttgatttaccttcctaatagaccaaacaaaaacgaaa 5417190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 8355542 - 8355488
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||| |||||    
T  8355542 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaatgaaaa 8355488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 27432795 - 27432741
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||||| |||||| | |||||| ||||||||    
T  27432795 tgtaaaatatttttgttttgatttacccccctaataggccaaacaacaacgaaaa 27432741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 30586374 - 30586320
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaa 226  Q
    ||||||||||||||||||||||||||||| | |||||| | ||||||||||||||    
T  30586374 ctgtaaaatatttttgttttgatttaccctcctaataggccaaacaaaaacgaaa 30586320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 49872796 - 49872845
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  49872796 ctgtaaaatatttttgttttgatttaccccc-taataggctaaacaaaaac 49872845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 19623989 - 19623932
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| | |||||| | ||||||||| |||||    
T  19623989 ctctgtaaaatatttttgttttgatttacccgcctaataggccaaacaaaaatgaaaa 19623932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 25110037 - 25109984
Alignment:
Q  174 gtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||| | |||||| | |||||||||||||||    
T  25110037 gtaaaatatttttgttttgatttaccctcctaataggccaaacaaaaacgaaaa 25109984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 3548204 - 3548252
Alignment:
Q  174 gtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  3548204 gtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 3548252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 5416139 - 5416190
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  5416139 ctctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 5416190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 51252130 - 51252178
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||    
T  51252130 tgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaa 51252178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 22949327 - 22949382
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||  ||||||   |||||||||||||||    
T  22949327 ctgtaaaatatttttgttttgatttaccccgctaataggtcaaacaaaaacgaaaa 22949382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 7584327 - 7584376
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  7584327 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 7584376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 12767144 - 12767095
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  12767144 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 12767095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 27760497 - 27760444
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||| ||||    
T  27760497 tgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaacaaaaa 27760444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 30271755 - 30271705
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| ||| || | ||||||||||    
T  30271755 ctgtaaaatatttttgttttgatttacccccctaagaggccaaacaaaaac 30271705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 32012048 - 32012014
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatag 209  Q
    |||||||||||||||||||||||||||||||||||    
T  32012048 taaaatatttttgttttgatttacccccataatag 32012014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 51252260 - 51252210
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||| || |||||| | ||||||||||    
T  51252260 ctgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaac 51252210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 5205320 - 5205275
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  5205320 tttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 5205275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 25109909 - 25109959
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||||  |||||| | ||||||||||    
T  25109909 ctctgtaaaatatttttgttttgatttacccc--taataggccaaacaaaaac 25109959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 27760369 - 27760418
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    ||||||||||||||||||||||||||||| | |||||| | |||||||||    
T  27760369 ctgtaaaatatttttgttttgatttaccctcttaataggccaaacaaaaa 27760418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 27521613 - 27521657
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaa 226  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||    
T  27521613 tttttgttttgatttacccccctaataggccaaacaaaaacgaaa 27521657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 43767739 - 43767794
Alignment:
Q  171 tctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||| || | |||||| | |||||||||||||||    
T  43767739 tctgtaaaatatttttgttttgatttatcctc-taataggccaaacaaaaacgaaaa 43767794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 46902077 - 46902025
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||| || |||||| | |||||||||| ||||    
T  46902077 taaaatatttttgttttgatttaccaccgtaataggccaaacaaaaacaaaaa 46902025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 10979928 - 10979974
Alignment:
Q  174 gtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    ||||||||||||||||||||||||||||| |||||| | |||||||||    
T  10979928 gtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaa 10979974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 12767017 - 12767071
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||  ||||||||||||||| |||||| | |||||||||||||||    
T  12767017 ctgtaaaatatttta-ttttgatttacccccctaataggccaaacaaaaacgaaaa 12767071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 10521761 - 10521802
Alignment:
Q  185 ttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  10521761 ttgtttcgatttaccccc-taatagactaaacaaaaacgaaaa 10521802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 10668001 - 10668043
Alignment:
Q  185 ttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||| ||||||||||| |||||||| |||||||||||||||    
T  10668001 ttgtttcgatttacccccctaatagaccaaacaaaaacgaaaa 10668043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 22949459 - 22949429
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  22949459 ctgtaaaatatttttgttttgatttaccccc 22949429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 36867716 - 36867766
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||| |||||||||| ||||||   ||||||||||    
T  36867716 ctgtaaaatatttttgttttcatttacccccctaataggtcaaacaaaaac 36867766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 14248791 - 14248742
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||| ||||||||||||||||||| |||| |||||| | ||||||||||    
T  14248791 tgtaacatatttttgttttgatttatccccttaataggccaaacaaaaac 14248742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 49880594 - 49880634
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||| |||||| | ||||||||||    
T  49880594 tttttgttttgatttacccccctaataggccaaacaaaaac 49880634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 3e-16; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 27794438 - 27794493
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  27794438 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 27794493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 28724506 - 28724451
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  28724506 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 28724451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 29018573 - 29018518
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  29018573 ctgtaaaatatttttgttttgatttacccctctaatagaccaaacaaaaacgaaaa 29018518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 5330500 - 5330555
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||| |||| |||||| | |||||||||||||||    
T  5330500 ctgtaaaatatttttgttttgatttatccccctaataggccaaacaaaaacgaaaa 5330555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 4646838 - 4646888
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  4646838 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 4646888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 5330631 - 5330581
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  5330631 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 5330581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 5348346 - 5348296
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  5348346 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 5348296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 21853975 - 21853921
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||| ||||||||   |||||||||||||||    
T  21853975 tgtaaaatatttttgttttgatttaccctcataataggtcaaacaaaaacgaaaa 21853921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 36343363 - 36343313
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  36343363 ctgtaaaatatttttgttttgatttacccccttaataggccaaacaaaaac 36343313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 10027847 - 10027892
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  10027847 tttttgttttgatttacccccctaatagaccaaacaaaaacgaaaa 10027892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 5348215 - 5348271
Alignment:
Q  172 ctgtaaaatatttttgttttgattta-cccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||    
T  5348215 ctgtaaaatatttttgttttgatttatcccccttaataggccaaacaaaaacgaaaa 5348271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 13154658 - 13154709
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  13154658 ctctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 13154709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 28724374 - 28724426
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| | |||||| | ||||||||||    
T  28724374 ctctgtaaaatatttttgttttgatttaccctcctaataggccaaacaaaaac 28724426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 36343236 - 36343283
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaa 219  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||    
T  36343236 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaa 36343283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 2059402 - 2059349
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||| |||||    
T  2059402 tgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaatgaaaa 2059349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 7112575 - 7112629
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||| ||||||||||||||||| |||| |||||| | |||||||||||||||    
T  7112575 tgtaaaacatttttgttttgatttatccccctaataggccaaacaaaaacgaaaa 7112629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 27794570 - 27794520
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||| ||||||||| |||||| | ||||||||||    
T  27794570 ctgtaaaatatttttgttttgctttacccccctaataggccaaacaaaaac 27794520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 30434455 - 30434402
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||| || |||||| | |||||||||||||||    
T  30434455 tgtaaaatatttttgttttgatttacctcc-taataggccaaacaaaaacgaaaa 30434402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 31532467 - 31532417
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||| || |||||| | ||||||||||    
T  31532467 ctgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaac 31532417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 2059274 - 2059311
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatag 209  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  2059274 ctgtaaaatatttttgttttgatttacccccctaatag 2059311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 16699081 - 16699033
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||    
T  16699081 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaa 16699033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 18458771 - 18458726
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||    
T  18458771 tttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 18458726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 35167985 - 35167948
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatag 209  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  35167985 ctgtaaaatatttttgttttgatttacccccctaatag 35167948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 42736798 - 42736745
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaa 226  Q
    |||||||||||||||| ||||||||||||| |||||| | |||| |||||||||    
T  42736798 tgtaaaatatttttgtcttgatttacccccctaataggccaaaccaaaacgaaa 42736745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 35034269 - 35034218
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||| ||||    
T  35034269 taaaatatttttgttttgattta-ccccataataggccaaacaaaaacaaaaa 35034218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 47022044 - 47021993
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||   |||||| | |||||||||||||||    
T  47022044 tgtaaaatatttttgttttgatttaccc---taataggccaaacaaaaacgaaaa 47021993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 4646970 - 4646915
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||| ||||||||||||||||||| | |||||| | || ||||||||||||    
T  4646970 ctgtaaaatgtttttgttttgatttaccctcctaataggccaatcaaaaacgaaaa 4646915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 6540799 - 6540846
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaa 219  Q
    ||||||||||||||||||||||||||||||  |||||| | |||||||    
T  6540799 ctgtaaaatatttttgttttgatttacccctctaataggccaaacaaa 6540846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 9043651 - 9043621
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  9043651 ctgtaaaatatttttgttttgatttaccccc 9043621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 15336436 - 15336486
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||  ||| |||||| | ||||||||||    
T  15336436 ctgtaaaatatttttgttttgatttattcccttaataggccaaacaaaaac 15336486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 21853467 - 21853497
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  21853467 ctgtaaaatatttttgttttgatttaccccc 21853497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 28411124 - 28411074
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||  |||||| | | ||||||||    
T  28411124 ctgtaaaatatttttgttttgatttacccctctaataggccagacaaaaac 28411074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 31955455 - 31955413
Alignment:
Q  183 ttttgttttgatttacccccataatagactaaacaaaaacgaa 225  Q
    |||||||||||||||||||| |||||| | |||||||||||||    
T  31955455 ttttgttttgatttacccccctaataggccaaacaaaaacgaa 31955413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 42736669 - 42736719
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||| | | |||||| | ||||||||||    
T  42736669 ctgtaaaatatttttgttttgatttactctcctaataggccaaacaaaaac 42736719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 42847711 - 42847669
Alignment:
Q  185 ttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||| |||||| | |||||||||||||||    
T  42847711 ttgttttgatttacccccctaataggccaaacaaaaacgaaaa 42847669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 44826292 - 44826243
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||| ||||||||||||||||||||| |||||| | ||||||||||    
T  44826292 ctgtaaaatgtttttgttttgatttaccccc-taataggccaaacaaaaac 44826243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 44826170 - 44826215
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||| | |||||| | |||||||||||||||    
T  44826170 tttttgttttgatttaccctcctaataggccaaacaaaaacgaaaa 44826215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 51904060 - 51904109
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||| ||||||||||||||||||||| || |||||| | ||||||||||    
T  51904060 tgtaatatatttttgttttgatttacctccctaataggccaaacaaaaac 51904109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 7112699 - 7112671
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccc 200  Q
    |||||||||||||||||||||||||||||    
T  7112699 ctgtaaaatatttttgttttgatttaccc 7112671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 33573845 - 33573805
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||| |||||| | ||||||||||    
T  33573845 tttttgttttgatttacccccctaataggccaaacaaaaac 33573805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Original strand, 46561465 - 46561493
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccc 200  Q
    |||||||||||||||||||||||||||||    
T  46561465 ctgtaaaatatttttgttttgatttaccc 46561493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 38130 - 38183
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  38130 tgtaaaatatttttgttttgatttaccccc-taataggctaaacaaaaacgaaaa 38183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 28484439 - 28484493
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaa 226  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||||||    
T  28484439 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaa 28484493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 16577193 - 16577250
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||||| ||||||   |||||||||||||||    
T  16577193 ctctgtaaaatatttttgttttgatttacccccctaataggtcaaacaaaaacgaaaa 16577250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 37147634 - 37147686
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  37147634 taaaatatttttgttttgatttacccccctaataggccaaacaaaaacgaaaa 37147686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 3364538 - 3364483
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||| || |||||| | |||||||||||||||    
T  3364538 ctgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaacgaaaa 3364483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 25228035 - 25227980
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||| |||||||| |||||| | |||||||||||||||    
T  25228035 ctgtaaaatatttttgttttgaattacccccctaataggccaaacaaaaacgaaaa 25227980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 25926964 - 25927018
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  25926964 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaacgaaaa 25927018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 28149514 - 28149564
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  28149514 ctgtaaaatatttttgttttgatttacccccctaataggccaaacaaaaac 28149564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 30371465 - 30371515
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||||||||    
T  30371465 ctgtaaaatatttttgttttgatttacccccctaataaaccaaacaaaaac 30371515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 85520 - 85574
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||  | |||||||||||||||    
T  85520 ctgtaaaatatttttgttttgatttaccccc-taataagccaaacaaaaacgaaaa 85574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 25227908 - 25227955
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||| |||||| | ||||||||||    
T  25227908 taaaatatttttgttttgatttacccccctaataggccaaacaaaaac 25227955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 37147763 - 37147712
Alignment:
Q  171 tctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||| || |||||| | ||||||||||    
T  37147763 tctgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaac 37147712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 39227874 - 39227928
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||| ||||    
T  39227874 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaacaaaaa 39227928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 12693655 - 12693705
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||| ||||||||||||||||||||||| |||||| | ||||||||||    
T  12693655 ctgtaaagtatttttgttttgatttacccccctaataggccaaacaaaaac 12693705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 28149642 - 28149589
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||| | |||||| | |||||||||||||||    
T  28149642 tgtaaaatatttttgttttgatttacccac-taataggccaaacaaaaacgaaaa 28149589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 38386139 - 38386089
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||| || |||||| | ||||||||||    
T  38386139 ctgtaaaatatttttgttttgatttacctccctaataggccaaacaaaaac 38386089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 1498967 - 1499015
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  1498967 tgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaac 1499015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 9011960 - 9011911
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||| ||||||||| |||||| | ||||||||||    
T  9011960 tgtaaaatatttttgttttggtttacccccctaataggccaaacaaaaac 9011911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 22535659 - 22535610
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||| |||||||||||||||||||||| |||||| | ||||||||||    
T  22535659 tgtaaaacatttttgttttgatttacccccctaataggccaaacaaaaac 22535610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 22535535 - 22535586
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||| | |||||| | |||||||||||||||    
T  22535535 taaaatatttttgttttgatttaccctc-taataggccaaacaaaaacgaaaa 22535586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 30371582 - 30371534
Alignment:
Q  179 atatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||| ||||||||||| |||||| | |||||||||||||||    
T  30371582 atatttttgtttcgatttacccccctaataggccaaacaaaaacgaaaa 30371534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 39228006 - 39227954
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||||||| ||  |||||| | ||||||||||    
T  39228006 ctctgtaaaatatttttgttttgatttactcctctaataggccaaacaaaaac 39227954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 17328172 - 17328227
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||| |||||||||||||||||| |  |||||| | |||||||||||||||    
T  17328172 ctgtaaaatgtttttgttttgatttacctctttaataggccaaacaaaaacgaaaa 17328227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 19052146 - 19052099
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||||||  || |||||||| ||||||||||    
T  19052146 taaaatatttttgttttgatttacatccctaatagaccaaacaaaaac 19052099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 19493455 - 19493401
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||| |||||||| |||||| |||||| | |||||||||||||||    
T  19493455 ctgtaaaatatttttattttgattcaccccc-taataggccaaacaaaaacgaaaa 19493401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 43302079 - 43302036
Alignment:
Q  184 tttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||| |||||| | |||||||||||||||    
T  43302079 tttgttttgatttacccccctaataggccaaacaaaaacgaaaa 43302036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 3364406 - 3364456
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||| |||||||||||||||||||| || |||||| | ||||||||||    
T  3364406 ctgtaaagtatttttgttttgatttaccaccctaataggccaaacaaaaac 3364456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 17328302 - 17328252
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||| |  |||||| | ||||||||||    
T  17328302 ctgtaaaatatttttgttttgatttacctctctaataggccaaacaaaaac 17328252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 20182352 - 20182394
Alignment:
Q  185 ttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||| |||||| | |||||||||||||||    
T  20182352 ttgttttgatttacccccctaataggccaaacaaaaacgaaaa 20182394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 23260399 - 23260429
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  23260399 ctgtaaaatatttttgttttgatttaccccc 23260429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 7894166 - 7894121
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||| | |||||| | |||||||||||||||    
T  7894166 tttttgttttgatttaccctcctaataggccaaacaaaaacgaaaa 7894121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 9011838 - 9011890
Alignment:
Q  174 gtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||| |||||  | ||||||||| |||||    
T  9011838 gtaaaatatttttgttttgatttaccccc-taataagccaaacaaaaatgaaaa 9011890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 29098226 - 29098177
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaa 221  Q
    |||||||||||||||||||| ||||||| || |||||| | |||||||||    
T  29098226 ctgtaaaatatttttgttttcatttacctccctaataggccaaacaaaaa 29098177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 34635797 - 34635842
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | ||||||||| |||||    
T  34635797 tttttgttttgatttacccccctaataggccaaacaaaaatgaaaa 34635842  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 18555668 - 18555708
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||| |||||| | ||||||||||    
T  18555668 tttttgttttgatttacccccctaataggccaaacaaaaac 18555708  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 18555775 - 18555732
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaa 226  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||    
T  18555775 tttttgttttgatttaccccc-taataggccaaacaaaaacgaaa 18555732  T

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Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Original strand, 29098098 - 29098126
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccc 200  Q
    |||||||||||||||||||||||||||||    
T  29098098 ctgtaaaatatttttgttttgatttaccc 29098126  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 34635908 - 34635868
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||| |||||| | ||||||||||    
T  34635908 tttttgttttgatttacccccctaataggccaaacaaaaac 34635868  T

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Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 2034 - 1985
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  2034 tgtaaaatatttttgttttgatttacccccctaataggctaaacaaaaac 1985  T

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Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 1909 - 1959
Alignment:
Q  173 tgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||    |||||| | |||||||||||||||    
T  1909 tgtaaaatatttttgttttgatttacc----taataggccaaacaaaaacgaaaa 1959  T

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Target: scaffold0809 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 3975 - 3921
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  3975 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaacgaaaa 3921  T

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Target: scaffold0809; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 3846 - 3896
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  3846 ctgtaaaatatttttgttttgatttacctccataataggccaaacaaaaac 3896  T

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Target: scaffold0727 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 912 - 966
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  912 ctgtaaaatatttttgttttgatttaccccc-taataggccaaacaaaaacgaaaa 966  T

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Target: scaffold0079 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 6952 - 6902
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaa 225  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||||    
T  6952 taaaatatttttgttttgatttacccccttaataggccaaacaaaaacgaa 6902  T

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Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 91260 - 91203
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||| |||||||||||||| |||||||   |||||||||||||||    
T  91260 ctctgtaaaatatttttattttgatttaccccaataataggtcaaacaaaaacgaaaa 91203  T

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Target: scaffold0740 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 3729 - 3781
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||    
T  3729 taaaatatttttgttttgatttacccctctaataggccaaacaaaaacgaaaa 3781  T

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Target: scaffold0416 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 6515 - 6475
Alignment:
Q  5 catgtacatgggtgtggtgattttgactcgtacattactcg 45  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  6515 catgtgcatgggtgtggtgattttgactcgtacattactcg 6475  T

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Target: scaffold0010 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 26514 - 26462
Alignment:
Q  170 ctctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||| |||||||||||||||||||||||||||| |||||| | ||||||||||    
T  26514 ctctataaaatatttttgttttgatttacccccctaataggccaaacaaaaac 26462  T

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Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 26390 - 26441
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||| |||||||||||||| |||||||| |||||| | |||||||||||||||    
T  26390 taaagtatttttgttttgaattaccccc-taataggccaaacaaaaacgaaaa 26441  T

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Target: scaffold0384 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 4407 - 4352
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||| |||||||||||||||||||| |||||| | |||||||||| ||||    
T  4407 ctgtaaaataattttgttttgatttacccccctaataggccaaacaaaaacaaaaa 4352  T

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Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 28860 - 28806
Alignment:
Q  172 ctgtaaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||| |||||||||| |||||| | |||||||||||||||    
T  28860 ctgtaaaatatttttgttttaatttaccccc-taataggccaaacaaaaacgaaaa 28806  T

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Target: scaffold0113; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 28151 - 28181
Alignment:
Q  172 ctgtaaaatatttttgttttgatttaccccc 202  Q
    |||||||||||||||||||||||||||||||    
T  28151 ctgtaaaatatttttgttttgatttaccccc 28181  T

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Target: scaffold0759 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 2721 - 2759
Alignment:
Q  7 tgtacatgggtgtggtgattttgactcgtacattactcg 45  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  2721 tgtacatgggtgtggtgattttgactcgttcattactcg 2759  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 4636 - 4585
Alignment:
Q  175 taaaatatttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    |||||||||||||||||||||||||||| || ||| | |||||||||||||||    
T  4636 taaaatatttttgttttgatttaccccc-tactaggccaaacaaaaacgaaaa 4585  T

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Target: scaffold0233 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 17966 - 18000
Alignment:
Q  7 tgtacatgggtgtggtgattttgactcgtacatta 41  Q
    ||||||||||||||||||||||||||| |||||||    
T  17966 tgtacatgggtgtggtgattttgactcctacatta 18000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 4117 - 4072
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaacgaaaa 227  Q
    ||||||||||||||||||||| |||||| | ||||||||| |||||    
T  4117 tttttgttttgatttacccccctaataggccaaacaaaaatgaaaa 4072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 4006 - 4046
Alignment:
Q  182 tttttgttttgatttacccccataatagactaaacaaaaac 222  Q
    ||||||||||||||||||||| |||||| | ||||||||||    
T  4006 tttttgttttgatttacccccctaataggccaaacaaaaac 4046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 44548 - 44512
Alignment:
Q  185 ttgttttgatttacccccataatagactaaacaaaaac 222  Q
    |||||||||||||||||| |||||||||||||||||||    
T  44548 ttgttttgatttaccccc-taatagactaaacaaaaac 44512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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