View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18721_high_2 (Length: 977)

Name: NF18721_high_2
Description: NF18721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18721_high_2
NF18721_high_2
[»] chr2 (63 HSPs)
chr2 (1-966)||(10618544-10619509)
chr2 (175-317)||(32592537-32592683)
chr2 (173-378)||(26201976-26202186)
chr2 (173-305)||(43279514-43279649)
chr2 (223-371)||(20952358-20952506)
chr2 (243-378)||(15305697-15305832)
chr2 (112-215)||(36114306-36114409)
chr2 (464-554)||(44439230-44439324)
chr2 (167-273)||(42868483-42868589)
chr2 (109-378)||(2416197-2416471)
chr2 (223-356)||(15757592-15757725)
chr2 (281-378)||(30331812-30331909)
chr2 (109-160)||(1633691-1633742)
chr2 (464-546)||(3476452-3476535)
chr2 (146-221)||(4026738-4026813)
chr2 (554-649)||(36307044-36307139)
chr2 (281-375)||(42419854-42419948)
chr2 (145-215)||(42420374-42420444)
chr2 (465-548)||(42982523-42982608)
chr2 (482-618)||(4894099-4894244)
chr2 (560-649)||(11759770-11759859)
chr2 (109-161)||(12795666-12795718)
chr2 (463-535)||(22535977-22536049)
chr2 (176-355)||(41851486-41851670)
chr2 (562-634)||(42774783-42774854)
chr2 (234-374)||(45229525-45229665)
chr2 (234-377)||(4606939-4607082)
chr2 (188-317)||(16451088-16451215)
chr2 (231-305)||(36125372-36125446)
chr2 (482-548)||(42740975-42741041)
chr2 (497-554)||(33961996-33962053)
chr2 (446-546)||(2002718-2002818)
chr2 (571-647)||(4007116-4007192)
chr2 (336-372)||(7103391-7103427)
chr2 (479-535)||(12037056-12037112)
chr2 (167-215)||(12464553-12464601)
chr2 (290-374)||(27317449-27317533)
chr2 (464-540)||(33019185-33019261)
chr2 (463-548)||(37420216-37420303)
chr2 (109-216)||(43570300-43570405)
chr2 (176-215)||(423773-423812)
chr2 (610-645)||(5973619-5973654)
chr2 (330-377)||(7928211-7928258)
chr2 (109-216)||(9395014-9395121)
chr2 (566-649)||(12110918-12111001)
chr2 (168-223)||(13325513-13325568)
chr2 (463-505)||(21743814-21743857)
chr2 (554-648)||(680203-680296)
chr2 (336-378)||(1830155-1830197)
chr2 (482-548)||(3352074-3352140)
chr2 (564-650)||(6767764-6767850)
chr2 (223-317)||(12289800-12289894)
chr2 (498-548)||(16488342-16488392)
chr2 (170-216)||(18962117-18962163)
chr2 (121-215)||(42457844-42457938)
chr2 (243-288)||(1633494-1633539)
chr2 (173-210)||(2195909-2195946)
chr2 (109-162)||(15757809-15757862)
chr2 (223-272)||(40279270-40279319)
chr2 (223-272)||(40279340-40279389)
chr2 (223-272)||(40279410-40279459)
chr2 (178-215)||(40835487-40835524)
chr2 (293-374)||(44590097-44590178)
[»] chr6 (47 HSPs)
chr6 (463-554)||(1485161-1485252)
chr6 (405-614)||(34620807-34621025)
chr6 (405-614)||(34748244-34748462)
chr6 (406-548)||(2234437-2234579)
chr6 (109-217)||(264255-264363)
chr6 (253-378)||(848022-848146)
chr6 (554-649)||(1499979-1500074)
chr6 (470-554)||(30926793-30926878)
chr6 (494-649)||(9505780-9505944)
chr6 (147-214)||(4163097-4163164)
chr6 (147-214)||(4224718-4224785)
chr6 (403-546)||(5724653-5724796)
chr6 (480-554)||(34898691-34898766)
chr6 (232-376)||(35070568-35070708)
chr6 (147-217)||(9093634-9093704)
chr6 (297-371)||(10645304-10645378)
chr6 (446-508)||(35098235-35098297)
chr6 (571-636)||(7953079-7953144)
chr6 (563-647)||(46201-46285)
chr6 (563-647)||(765298-765382)
chr6 (497-545)||(10874507-10874555)
chr6 (572-647)||(3436796-3436871)
chr6 (494-548)||(31305868-31305922)
chr6 (290-378)||(6538584-6538672)
chr6 (167-215)||(8147644-8147692)
chr6 (113-217)||(9559619-9559723)
chr6 (167-215)||(24626237-24626285)
chr6 (463-535)||(26280584-26280656)
chr6 (167-211)||(31623502-31623546)
chr6 (290-378)||(34404638-34404726)
chr6 (167-215)||(35070710-35070758)
chr6 (464-555)||(852512-852603)
chr6 (563-618)||(882774-882829)
chr6 (554-649)||(3525004-3525099)
chr6 (557-632)||(22692639-22692714)
chr6 (406-535)||(10400729-10400859)
chr6 (601-647)||(20871627-20871673)
chr6 (342-376)||(30536879-30536913)
chr6 (466-534)||(3436917-3436986)
chr6 (463-548)||(4910887-4910972)
chr6 (464-524)||(6544543-6544604)
chr6 (463-540)||(6654119-6654196)
chr6 (235-272)||(31624959-31624996)
chr6 (187-216)||(31671153-31671182)
chr6 (146-215)||(33117463-33117532)
chr6 (511-548)||(34027438-34027475)
chr6 (320-377)||(35069525-35069582)
[»] chr3 (71 HSPs)
chr3 (485-647)||(35264324-35264495)
chr3 (463-546)||(35058340-35058423)
chr3 (115-375)||(402457-402721)
chr3 (464-645)||(37334949-37335139)
chr3 (167-371)||(20880419-20880627)
chr3 (463-554)||(36302162-36302253)
chr3 (463-554)||(44958621-44958712)
chr3 (231-305)||(30443904-30443978)
chr3 (587-643)||(50427184-50427240)
chr3 (195-317)||(21367637-21367764)
chr3 (223-378)||(39980732-39980887)
chr3 (253-367)||(31365111-31365225)
chr3 (463-554)||(30301013-30301105)
chr3 (469-541)||(40147878-40147950)
chr3 (554-641)||(584712-584799)
chr3 (147-217)||(34638042-34638113)
chr3 (173-311)||(36631030-36631173)
chr3 (147-305)||(43062618-43062776)
chr3 (565-647)||(31766160-31766242)
chr3 (554-648)||(32112073-32112167)
chr3 (109-207)||(34235164-34235262)
chr3 (226-379)||(901930-902082)
chr3 (486-618)||(3776524-3776665)
chr3 (571-647)||(42644302-42644379)
chr3 (494-555)||(51285580-51285641)
chr3 (463-523)||(7717367-7717427)
chr3 (109-217)||(31403242-31403350)
chr3 (463-538)||(41115392-41115468)
chr3 (510-554)||(46853549-46853593)
chr3 (290-373)||(9832672-9832755)
chr3 (464-554)||(25359589-25359679)
chr3 (281-367)||(31365232-31365318)
chr3 (566-632)||(52925551-52925617)
chr3 (563-636)||(1441331-1441404)
chr3 (327-372)||(25447163-25447208)
chr3 (571-632)||(25577696-25577757)
chr3 (109-215)||(30956706-30956822)
chr3 (109-215)||(30972518-30972634)
chr3 (296-371)||(32582816-32582888)
chr3 (167-215)||(24684903-24684951)
chr3 (583-647)||(30958145-30958209)
chr3 (583-647)||(30973957-30974021)
chr3 (297-376)||(42799880-42799960)
chr3 (109-161)||(42800057-42800109)
chr3 (585-649)||(42913164-42913228)
chr3 (617-649)||(49356304-49356336)
chr3 (109-164)||(1508722-1508777)
chr3 (405-535)||(3845148-3845276)
chr3 (464-535)||(5406886-5406957)
chr3 (327-378)||(16072953-16073004)
chr3 (573-648)||(25620179-25620254)
chr3 (110-161)||(31365416-31365467)
chr3 (147-221)||(34632131-34632206)
chr3 (281-376)||(42545312-42545407)
chr3 (480-535)||(52364047-52364102)
chr3 (504-554)||(23187865-23187915)
chr3 (572-630)||(24916581-24916639)
chr3 (554-648)||(25129451-25129545)
chr3 (477-547)||(27499383-27499453)
chr3 (554-644)||(41591269-41591359)
chr3 (562-632)||(48089618-48089688)
chr3 (233-302)||(13715560-13715629)
chr3 (328-369)||(26911699-26911740)
chr3 (327-368)||(33405114-33405155)
chr3 (290-371)||(34610725-34610806)
chr3 (251-316)||(37689261-37689325)
chr3 (580-649)||(44958553-44958622)
chr3 (148-216)||(46030911-46030980)
chr3 (611-648)||(49158656-49158693)
chr3 (464-536)||(51167846-51167919)
chr3 (560-649)||(53567961-53568050)
[»] chr4 (75 HSPs)
chr4 (223-374)||(54426046-54426197)
chr4 (223-375)||(17822780-17822932)
chr4 (109-313)||(50662715-50662918)
chr4 (223-376)||(21731570-21731723)
chr4 (494-554)||(33843987-33844047)
chr4 (445-548)||(32818391-32818494)
chr4 (464-634)||(55927696-55927875)
chr4 (231-375)||(26780-26923)
chr4 (244-376)||(25904137-25904269)
chr4 (231-363)||(29657395-29657527)
chr4 (223-375)||(53294029-53294181)
chr4 (405-548)||(2635084-2635227)
chr4 (554-649)||(43868215-43868310)
chr4 (109-215)||(3155487-3155593)
chr4 (463-647)||(22250205-22250398)
chr4 (296-372)||(8705017-8705093)
chr4 (494-554)||(37439155-37439215)
chr4 (223-371)||(39603090-39603237)
chr4 (425-548)||(35065004-35065127)
chr4 (109-204)||(26982-27079)
chr4 (463-548)||(2206364-2206450)
chr4 (251-369)||(22030234-22030352)
chr4 (565-647)||(38740287-38740369)
chr4 (109-215)||(44863042-44863148)
chr4 (173-334)||(50681045-50681211)
chr4 (494-535)||(8330126-8330167)
chr4 (464-548)||(30357492-30357576)
chr4 (233-372)||(2244064-2244203)
chr4 (503-554)||(4243406-4243457)
chr4 (226-305)||(7839346-7839425)
chr4 (464-554)||(18597019-18597110)
chr4 (467-557)||(33843661-33843756)
chr4 (223-373)||(40830947-40831096)
chr4 (109-215)||(11389410-11389516)
chr4 (563-649)||(20911810-20911896)
chr4 (483-548)||(1048716-1048781)
chr4 (176-264)||(9760391-9760484)
chr4 (494-555)||(10185204-10185265)
chr4 (251-372)||(13126494-13126615)
chr4 (281-370)||(15173223-15173312)
chr4 (109-277)||(44138443-44138616)
chr4 (585-649)||(24364103-24364167)
chr4 (330-378)||(25571369-25571417)
chr4 (281-377)||(42403936-42404031)
chr4 (404-554)||(45329766-45329918)
chr4 (585-649)||(48575494-48575558)
chr4 (574-649)||(5835778-5835853)
chr4 (464-535)||(16643958-16644029)
chr4 (561-632)||(17898057-17898127)
chr4 (497-544)||(20712664-20712710)
chr4 (170-217)||(25885804-25885851)
chr4 (282-373)||(29774302-29774393)
chr4 (464-535)||(51093238-51093309)
chr4 (234-301)||(55302263-55302330)
chr4 (571-629)||(1023849-1023907)
chr4 (498-548)||(2206850-2206900)
chr4 (482-544)||(9064229-9064291)
chr4 (342-376)||(22662165-22662199)
chr4 (342-376)||(22666644-22666678)
chr4 (327-377)||(27043743-27043793)
chr4 (463-505)||(29779118-29779160)
chr4 (567-641)||(35122301-35122375)
chr4 (173-215)||(43505904-43505946)
chr4 (173-211)||(44797834-44797872)
chr4 (173-215)||(51630059-51630101)
chr4 (463-545)||(55639744-55639826)
chr4 (482-546)||(2206515-2206580)
chr4 (571-632)||(2206622-2206683)
chr4 (345-378)||(20109139-20109172)
chr4 (252-377)||(24169295-24169420)
chr4 (614-651)||(25405729-25405766)
chr4 (226-378)||(43505940-43506093)
chr4 (403-524)||(48045746-48045867)
chr4 (572-645)||(50945390-50945463)
chr4 (244-317)||(55064859-55064932)
[»] chr8 (54 HSPs)
chr8 (425-647)||(32927833-32928064)
chr8 (167-376)||(35534527-35534738)
chr8 (234-377)||(30251367-30251510)
chr8 (438-634)||(26100072-26100278)
chr8 (583-646)||(7602042-7602105)
chr8 (231-334)||(26771276-26771379)
chr8 (296-378)||(43717846-43717928)
chr8 (112-264)||(30657798-30657944)
chr8 (464-550)||(4554314-4554401)
chr8 (231-334)||(18133667-18133770)
chr8 (553-647)||(10368043-10368137)
chr8 (450-548)||(13418840-13418938)
chr8 (173-378)||(35643900-35644103)
chr8 (553-650)||(3206135-3206231)
chr8 (554-635)||(28805254-28805335)
chr8 (597-649)||(1820460-1820512)
chr8 (597-649)||(1854905-1854957)
chr8 (290-378)||(32840898-32840986)
chr8 (554-649)||(9461450-9461544)
chr8 (175-377)||(10758170-10758376)
chr8 (175-354)||(35749506-35749684)
chr8 (591-645)||(4336571-4336625)
chr8 (560-630)||(4950568-4950638)
chr8 (482-548)||(13384675-13384741)
chr8 (611-649)||(18355760-18355798)
chr8 (291-376)||(38602400-38602483)
chr8 (554-647)||(18123305-18123398)
chr8 (224-317)||(37945600-37945693)
chr8 (565-633)||(1373081-1373149)
chr8 (508-544)||(3478728-3478764)
chr8 (479-535)||(15677850-15677906)
chr8 (591-631)||(30706283-30706323)
chr8 (553-641)||(38516328-38516416)
chr8 (464-548)||(38868478-38868562)
chr8 (463-554)||(16972079-16972170)
chr8 (464-554)||(38203265-38203356)
chr8 (224-375)||(38648355-38648506)
chr8 (232-379)||(43045636-43045783)
chr8 (601-647)||(26559864-26559910)
chr8 (223-348)||(28763371-28763496)
chr8 (585-647)||(32994153-32994215)
chr8 (611-649)||(35550309-35550347)
chr8 (147-217)||(37444493-37444563)
chr8 (463-537)||(37684384-37684458)
chr8 (571-649)||(38715192-38715270)
chr8 (151-217)||(41475138-41475204)
chr8 (445-546)||(4662926-4663027)
chr8 (109-186)||(5404501-5404578)
chr8 (595-648)||(5893332-5893385)
chr8 (461-546)||(8693738-8693823)
chr8 (147-216)||(16210965-16211034)
chr8 (332-373)||(26479897-26479938)
chr8 (585-626)||(32681238-32681279)
chr8 (187-272)||(39881770-39881855)
[»] chr7 (56 HSPs)
chr7 (480-598)||(41788312-41788439)
chr7 (464-544)||(27571842-27571922)
chr7 (281-370)||(34464141-34464230)
chr7 (444-548)||(45004980-45005084)
chr7 (425-647)||(40491519-40491750)
chr7 (463-541)||(5489874-5489952)
chr7 (251-373)||(19302480-19302602)
chr7 (173-377)||(48469992-48470201)
chr7 (103-214)||(20881717-20881828)
chr7 (281-375)||(4970707-4970801)
chr7 (554-632)||(40795917-40795995)
chr7 (482-555)||(30182310-30182383)
chr7 (231-356)||(33601344-33601469)
chr7 (479-548)||(38123687-38123756)
chr7 (581-633)||(39734639-39734691)
chr7 (167-215)||(46078089-46078137)
chr7 (235-317)||(420375-420457)
chr7 (463-618)||(15050271-15050436)
chr7 (234-371)||(20526460-20526597)
chr7 (550-647)||(42481803-42481900)
chr7 (571-647)||(35105254-35105330)
chr7 (112-164)||(38500059-38500111)
chr7 (226-317)||(11619131-11619222)
chr7 (176-215)||(20269527-20269566)
chr7 (226-317)||(21568468-21568559)
chr7 (563-618)||(29829311-29829366)
chr7 (109-211)||(39279646-39279749)
chr7 (570-648)||(48158913-48158991)
chr7 (223-317)||(19022558-19022652)
chr7 (109-159)||(27863843-27863893)
chr7 (173-215)||(28613614-28613656)
chr7 (223-363)||(45790357-45790492)
chr7 (244-329)||(38499874-38499959)
chr7 (585-641)||(597862-597918)
chr7 (464-548)||(1410942-1411026)
chr7 (109-161)||(21568772-21568824)
chr7 (327-379)||(33673184-33673236)
chr7 (464-548)||(41386836-41386920)
chr7 (176-215)||(11700346-11700385)
chr7 (464-555)||(23441244-23441335)
chr7 (109-164)||(40196251-40196306)
chr7 (480-554)||(597961-598034)
chr7 (223-317)||(19214379-19214473)
chr7 (243-317)||(28614456-28614530)
chr7 (483-533)||(28725088-28725138)
chr7 (327-373)||(44822065-44822111)
chr7 (175-221)||(45004716-45004762)
chr7 (231-273)||(46280289-46280331)
chr7 (572-649)||(5489781-5489857)
chr7 (466-555)||(23458041-23458130)
chr7 (231-304)||(30570917-30570990)
chr7 (563-604)||(35222074-35222115)
chr7 (293-378)||(36517650-36517735)
chr7 (142-215)||(40009387-40009460)
chr7 (567-632)||(44856719-44856784)
chr7 (178-215)||(45264048-45264085)
[»] chr5 (60 HSPs)
chr5 (243-370)||(9107113-9107240)
chr5 (109-372)||(9202666-9202934)
chr5 (234-377)||(7705911-7706054)
chr5 (231-377)||(12857251-12857397)
chr5 (231-377)||(12857618-12857764)
chr5 (223-373)||(16937800-16937950)
chr5 (244-376)||(10639977-10640109)
chr5 (565-647)||(14299416-14299498)
chr5 (116-217)||(12425462-12425563)
chr5 (121-370)||(39105360-39105615)
chr5 (173-334)||(16457935-16458100)
chr5 (226-371)||(32009698-32009844)
chr5 (173-317)||(29925789-29925938)
chr5 (463-540)||(34250380-34250457)
chr5 (220-305)||(37954686-37954771)
chr5 (173-376)||(42500157-42500347)
chr5 (109-209)||(1465105-1465205)
chr5 (464-535)||(3738142-3738213)
chr5 (168-377)||(39594751-39594964)
chr5 (494-555)||(24306110-24306171)
chr5 (494-555)||(24367145-24367206)
chr5 (463-548)||(42858087-42858172)
chr5 (109-205)||(28776859-28776955)
chr5 (244-376)||(40426789-40426921)
chr5 (251-317)||(3735131-3735197)
chr5 (406-554)||(10898644-10898791)
chr5 (466-508)||(14299723-14299765)
chr5 (109-215)||(19460466-19460572)
chr5 (327-377)||(35299872-35299922)
chr5 (233-378)||(3932588-3932733)
chr5 (140-272)||(4014442-4014579)
chr5 (463-548)||(36639916-36640001)
chr5 (144-217)||(42569058-42569131)
chr5 (572-632)||(5465398-5465458)
chr5 (148-216)||(7674571-7674639)
chr5 (175-215)||(14932240-14932280)
chr5 (463-503)||(29922035-29922075)
chr5 (167-215)||(35445997-35446045)
chr5 (112-215)||(465841-465944)
chr5 (594-649)||(707644-707699)
chr5 (602-649)||(4848064-4848111)
chr5 (553-648)||(4975053-4975147)
chr5 (553-648)||(6095243-6095338)
chr5 (167-210)||(9107054-9107097)
chr5 (554-649)||(14671104-14671198)
chr5 (339-374)||(29336749-29336784)
chr5 (573-636)||(35138947-35139010)
chr5 (464-507)||(35139093-35139136)
chr5 (444-535)||(43310574-43310665)
chr5 (554-636)||(117420-117502)
chr5 (611-649)||(2124244-2124282)
chr5 (173-215)||(37112338-37112380)
chr5 (110-215)||(39247984-39248090)
chr5 (223-277)||(43300881-43300935)
chr5 (463-519)||(7667588-7667645)
chr5 (482-551)||(18585325-18585394)
chr5 (463-535)||(33608482-33608555)
chr5 (291-356)||(35445778-35445843)
chr5 (494-535)||(36927744-36927785)
chr5 (342-375)||(40335788-40335821)
[»] chr1 (65 HSPs)
chr1 (464-554)||(10324953-10325043)
chr1 (223-365)||(49938750-49938892)
chr1 (486-647)||(3515820-3515979)
chr1 (109-215)||(30581686-30581792)
chr1 (223-372)||(3233933-3234082)
chr1 (231-375)||(2295107-2295251)
chr1 (440-544)||(6021760-6021864)
chr1 (167-310)||(37631539-37631687)
chr1 (445-548)||(28083909-28084012)
chr1 (167-297)||(47432038-47432172)
chr1 (109-163)||(6556892-6556946)
chr1 (121-211)||(9572192-9572282)
chr1 (231-317)||(51929512-51929598)
chr1 (444-541)||(47892416-47892513)
chr1 (482-554)||(20026179-20026251)
chr1 (494-645)||(33693031-33693172)
chr1 (109-164)||(5894294-5894349)
chr1 (554-649)||(11817228-11817323)
chr1 (109-371)||(27146174-27146434)
chr1 (173-356)||(29904707-29904887)
chr1 (571-647)||(13344837-13344913)
chr1 (231-375)||(14576569-14576712)
chr1 (233-313)||(15477578-15477658)
chr1 (223-315)||(17603359-17603451)
chr1 (147-272)||(15784257-15784381)
chr1 (479-554)||(28287351-28287426)
chr1 (109-164)||(33541849-33541904)
chr1 (290-377)||(38001665-38001752)
chr1 (109-164)||(47498974-47499029)
chr1 (109-160)||(51688579-51688630)
chr1 (223-317)||(473167-473260)
chr1 (464-554)||(7790657-7790747)
chr1 (611-649)||(22548210-22548248)
chr1 (410-548)||(24587835-24587976)
chr1 (293-371)||(37617384-37617462)
chr1 (609-647)||(47899387-47899425)
chr1 (554-647)||(7524192-7524285)
chr1 (464-521)||(10325076-10325133)
chr1 (479-548)||(11049245-11049314)
chr1 (109-162)||(15477443-15477496)
chr1 (554-631)||(15514998-15515075)
chr1 (504-549)||(29759632-29759677)
chr1 (482-535)||(48549046-48549099)
chr1 (167-215)||(30582028-30582076)
chr1 (233-376)||(33186318-33186462)
chr1 (609-649)||(38512453-38512493)
chr1 (566-633)||(4347033-4347100)
chr1 (142-197)||(15942250-15942305)
chr1 (149-216)||(23544719-23544786)
chr1 (553-632)||(28464923-28465002)
chr1 (554-641)||(35961447-35961534)
chr1 (601-652)||(49537195-49537246)
chr1 (292-371)||(50644174-50644253)
chr1 (512-554)||(213552-213594)
chr1 (479-548)||(6574175-6574245)
chr1 (336-378)||(26184859-26184901)
chr1 (470-536)||(29964085-29964151)
chr1 (482-548)||(34387714-34387780)
chr1 (463-532)||(3016142-3016210)
chr1 (513-554)||(17284125-17284166)
chr1 (553-626)||(26382761-26382834)
chr1 (425-535)||(31362239-31362345)
chr1 (554-647)||(32369944-32370037)
chr1 (244-317)||(37473427-37473500)
chr1 (289-378)||(38247396-38247485)
[»] scaffold0361 (1 HSPs)
scaffold0361 (463-630)||(14044-14219)
[»] scaffold0024 (2 HSPs)
scaffold0024 (147-264)||(21311-21426)
scaffold0024 (173-217)||(58885-58929)
[»] scaffold0221 (1 HSPs)
scaffold0221 (234-301)||(22245-22312)
[»] scaffold0172 (1 HSPs)
scaffold0172 (566-649)||(15240-15323)


Alignment Details
Target: chr2 (Bit Score: 942; Significance: 0; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 942; E-Value: 0
Query Start/End: Original strand, 1 - 966
Target Start/End: Complemental strand, 10619509 - 10618544
Alignment:
Q  1 gcttaacgttctagaagcatcaaaacgcgcgggtgtgaagcgcgtggttcttacatcctccatttcagccatggtactgttctcaatatcatccatgcac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619509 gcttaacgttctagaagcatcaaaacgcgcgggtgtgaagcgcgtggttcttacatcctccatttcagccatggtactgttctcaatatcatccatgcac 10619410  T
Q  101 ttaaatgcttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaaca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619409 ttaaatgcttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaaca 10619310  T
Q  201 aagttaaattgttttcgcatacaagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgtt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619309 aagttaaattgttttcgcatacaagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgtt 10619210  T
Q  301 ttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggccctagtatatgtttgctcacttctac 400  Q
    ||||||||||||||||||| ||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619209 ttcatgagttctcccaaggggtctcacaaaacttgtgtcagtagataaactcaaatgagtcaatccaaacaggccctagtatatgtttgctcacttctac 10619110  T
Q  401 taggccaaaattgattctatagcggtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagc 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619109 taggccaaaattgattctatagcggtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagc 10619010  T
Q  501 tagaaattagagcttttgattctataattgattttaacactcaaatttgttgtttttatataaatgtatacaaacataattcactttaccttcaattcat 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619009 tagaaattagagcttttgattctataattgattttaacactcaaatttgttgtttttatataaatgtatacaaacataattcactttaccttcaattcat 10618910  T
Q  601 ttttagctagaatcaattttacaaaatcaattcactaaaaatcaattttaaacatacttttagccattcttgcatatttatttatttataaaagtacaag 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10618909 ttttagctagaatcaattttacaaaatcaattcactaaaaatcaattttaaacatacttttagccattcttgcatatttatttatttataaaagtacaag 10618810  T
Q  701 taaatttgtccctccaacaggtaccaaaccctaattggccggaaaacaaggcgattgacgaggggtcgtggactgatgttgagtactgtaagttgagggg 800  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10618809 taaatttgtccctccaacaggtaccaaaccctaattggccggaaaacaaggcgattgacgaggggtcgtggactgatgttgagtactgtaagttgagggg 10618710  T
Q  801 gaagtggtatcccgtgtcgaaaacggaggcggagaaggcggcgtgggagttttgtgagaaacacagcggtgtggatgtggttgcagttcatccggggact 900  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10618709 gaagtggtatcccgtgtcgaaaacggaggcggagaaggtggcgtgggagttttgtgagaaacacagcggtgtggatgtggttgcagttcatccagggact 10618610  T
Q  901 tgtttggggccgttgcttcagaatcagatgaatgcaagttctgcggtgttgcagaggttgatgatg 966  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10618609 tgtttggggccgttgcttcagaatcagatgaatgcaagttctgcggtgttgcagaggttgatgatg 10618544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 175 - 317
Target Start/End: Original strand, 32592537 - 32592683
Alignment:
Q  175 ctatttttatagaaaaagataaaacaaagttaaattgttttcgcatac-----aagttgtgtttataagctagattggagtacttatgaaaataagctga 269  Q
    |||||||||||||||||||||||| || ||||||||||||| | ||||     ||||||| ||||||||| | ||||||| ||||||||||||||| |||    
T  32592537 ctatttttatagaaaaagataaaataatgttaaattgtttt-gtatacgctataagttgtttttataagcaatattggagaacttatgaaaataagttga 32592635  T
Q  270 aaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
     ||| |||   |||||||| | |||||| ||||||| |||||||||||    
T  32592636 gaaaagcttatgaaaattgtcgtaagctattttcataagttctcccaa 32592683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 173 - 378
Target Start/End: Original strand, 26201976 - 26202186
Alignment:
Q  173 agctatttttatagaaaa-agataaaacaaagttaaattgttttcgca----tacaagttgtgtttataagctagattggagtacttatgaaaataagct 267  Q
    |||||||||||||| ||| |||||||| || ||||||||| | ||| |    || ||||||| |||||||| || ||||||| ||||||||||||||| |    
T  26201976 agctatttttatagcaaagagataaaataacgttaaattggtctcgtactgctataagttgtttttataagatatattggagaacttatgaaaataagtt 26202075  T
Q  268 gaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatcca 367  Q
    |||||| |||   |||||||| |||||| |||| |||| | ||||  ||| || |||  |||||||| |||||  ||||||  |||||| ||| ||||||    
T  26202076 gaaaaaagcttatgaaaattgtcataagttgttctcataaattctagcaaagaatctcacaaaacttatgtcagcagataagttcaaataagttaatcca 26202175  T
Q  368 aacaggcccta 378  Q
    |||||||||||    
T  26202176 aacaggcccta 26202186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 173 - 305
Target Start/End: Complemental strand, 43279649 - 43279514
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgttttcgcatac---aagttgtgtttataagctagattggagtacttatgaaaataagctga 269  Q
    |||||||||||||  ||||||||||| || || |||||||||| | || |   ||||||| ||||||||||| ||||||| |||| |||||||||| |||    
T  43279649 agctatttttatatcaaaagataaaataatgtgaaattgtttttgtatgctataagttgtttttataagctatattggagaacttgtgaaaataagttga 43279550  T
Q  270 aaaatgctcgagaaaattgacataagctgttttcat 305  Q
    |||| |||   |||||||| ||||||||||||||||    
T  43279549 aaaaagcttatgaaaattgtcataagctgttttcat 43279514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 223 - 371
Target Start/End: Original strand, 20952358 - 20952506
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagt 322  Q
    ||||||| ||||| ||||| ||||||| ||||||||||||||| ||||||| | |   |||||||| ||||| |||||||||| |||||||  ||  |||    
T  20952358 aagttgtttttattagctatattggagaacttatgaaaataagttgaaaaaagttaatgaaaattggcataaactgttttcataagttctcttaaatagt 20952457  T
Q  323 cttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaaca 371  Q
    ||  |||||||| || || || |||| ||||||| ||||||||||||||    
T  20952458 ctaacaaaacttttgccagtatataagctcaaataagtcaatccaaaca 20952506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 243 - 378
Target Start/End: Original strand, 15305697 - 15305832
Alignment:
Q  243 attggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaat 342  Q
    ||||||| ||||||||||||||| |||||||  ||   |||||||| |||||| |||| |||  |||||| ||||  ||| |  |||||||| |||||||    
T  15305697 attggagaacttatgaaaataagttgaaaaaaacttatgaaaattgccataagttgttgtcaaaagttctaccaaacagtttcacaaaacttatgtcaat 15305796  T
Q  343 agataaactcaaatgagtcaatccaaacaggcccta 378  Q
    |||||| ||||||| || ||||||||||||||||||    
T  15305797 agataagctcaaataagccaatccaaacaggcccta 15305832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 36114306 - 36114409
Alignment:
Q  112 gataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattg 211  Q
    |||||| || ||||||| || |||||||| | ||| ||||||||||||| ||| ||| |||||||||||||||   ||||||||||| ||||||||||||    
T  36114306 gataaataggttatttgcagcttatagtacacgtgtttatcatgataagtgcttatatattagctatttttatgacaaaagataaaataaagttaaattg 36114405  T
Q  212 tttt 215  Q
    ||||    
T  36114406 tttt 36114409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 464 - 554
Target Start/End: Original strand, 44439230 - 44439324
Alignment:
Q  464 aattgattttgcctttagaa---ttgattctag-ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||||||||||||| |||||   |||||||||  ||||||||| || || ||||||||||||||| ||||||||||||||||||||||| |||||    
T  44439230 aattgattttgcctctagaagaattgattctaacttgaagctaaaatttggagcttttgattctaaaattgattttaacactcaaatttattgtt 44439324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 273
Target Start/End: Complemental strand, 42868589 - 42868483
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattgttttcgcata-caagttgtgtttataagctagattggagtacttatgaaaataag 265  Q
    ||||| ||||||||| |||||||||||||||| |||||||||||||||| | |||  ||| | | ||| |||| || ||||||| |||||||||||||||    
T  42868589 tacataagctattttcatagaaaaagataaaataaagttaaattgtttttgtatattaagctat-tttgtaagttatattggagaacttatgaaaataag 42868491  T
Q  266 ctgaaaaa 273  Q
    ||||||||    
T  42868490 ctgaaaaa 42868483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 378
Target Start/End: Original strand, 2416197 - 2416471
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    ||||||||||| |||||||  || |||||| | |||| ||||||||| |||| ||| ||  || || ||||| | ||| |||||||||||  ||||||||    
T  2416197 ttggataaacaacttattttcagcttatagcacaagttcttatcatgttaagtgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaa 2416296  T
Q  209 ttgttttcgcatac-----aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttc 303  Q
    |||||||   |||      ||| ||| |||||||| || ||  ||| |||||||||| || |||||||   ||| | ||| | ||||| ||||||||||     
T  2416297 ttgttttgatataagctataagctgtttttataagttatataagagaacttatgaaagtatgctgaaattagcttgtgaacaatgacaaaagctgtttta 2416396  T
Q  304 atgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    || |||||| ||||| ||| |  |||||||| ||| | ||||||||||||||| |||||||| ||||| ||||||    
T  2416397 ataagttcttccaagcagtttcacaaaacttatgttagtagataaactcaaataagtcaatctaaacatgcccta 2416471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 223 - 356
Target Start/End: Complemental strand, 15757725 - 15757592
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagt 322  Q
    ||||||| ||||||||||| |   ||| || |||||||||||||||||||| |||   |||||||| ||||||| |||||||| | |||||||||| |||    
T  15757725 aagttgtatttataagctatacaagagaacgtatgaaaataagctgaaaaaagcttctgaaaattgtcataagcagttttcataaattctcccaagcagt 15757626  T
Q  323 cttgcaaaacttgtgtcaatagataaactcaaat 356  Q
    ||  |||||||| || || || |||| |||||||    
T  15757625 ctcacaaaacttatgccagtaaataagctcaaat 15757592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 281 - 378
Target Start/End: Original strand, 30331812 - 30331909
Alignment:
Q  281 gaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    |||||||| |||||| | ||||||| |||||||||||  |||||  |||||||| ||||| ||||||| || |||| |||||||||||||| ||||||    
T  30331812 gaaaattgtcataaggttttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctgaaataagtcaatccaaacaagcccta 30331909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 1633742 - 1633691
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataag 160  Q
    |||||||||||||||||||| || |||||| |||||||||||||||||||||    
T  1633742 ttggataaacagcttatttgcagcttatagcagaagtgcttatcatgataag 1633691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 464 - 546
Target Start/End: Complemental strand, 3476535 - 3476452
Alignment:
Q  464 aattgattttgcctttagaattgattctag-ttgaagctagaaattagagcttttgattctataattgattttaacactcaaat 546  Q
    ||||||||||||||  |||||||||||||  || |||||| ||||||||||||||||||||| |||| ||||| ||| ||||||    
T  3476535 aattgattttgcctccagaattgattctaacttaaagctaaaaattagagcttttgattctagaatttatttttacattcaaat 3476452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 4026738 - 4026813
Alignment:
Q  146 gcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttttcgcata 221  Q
    ||||||||||||||| ||| ||  || |||||||||||||| ||||||||||| ||||||||||| |||| |||||    
T  4026738 gcttatcatgataagtgcttatctataagctatttttatagcaaaagataaaataaagttaaattatttttgcata 4026813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 554 - 649
Target Start/End: Original strand, 36307044 - 36307139
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||||||||||  |||||||||| | | ||||||| ||||| ||| ||||| | | ||||||||||||| |||||||||||| || |||||||||    
T  36307044 ttttatataaatacatacaaacatcaattactttacgttcaactcacttttatccataatcaattttacataatcaattcactcaagatcaatttt 36307139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 281 - 375
Target Start/End: Original strand, 42419854 - 42419948
Alignment:
Q  281 gaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcc 375  Q
    ||||| || |||||||||||||| | |||||||||||  |||||   ||||||| |||||  |||||||||||||| |||||||||||| |||||    
T  42419854 gaaaaatgtcataagctgttttcgtaagttctcccaaacagtctcaaaaaacttatgtcagaagataaactcaaataagtcaatccaaaaaggcc 42419948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 42420444 - 42420374
Alignment:
Q  145 tgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    |||||||||||||||||||| |   || |||||||||||||| ||||||||||| || |||||||||||||    
T  42420444 tgcttatcatgataagcgcttacgtataagctatttttatagcaaaagataaaataacgttaaattgtttt 42420374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 465 - 548
Target Start/End: Original strand, 42982523 - 42982608
Alignment:
Q  465 attgattttgcctttagaatt--gattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    |||||||||||||  ||||||  ||||||| |||||||||||||||  |||||||||||| | |||||||||| |||| |||||||    
T  42982523 attgattttgcctccagaattttgattctacttgaagctagaaattgtagcttttgattccagaattgatttttacacacaaattt 42982608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 482 - 618
Target Start/End: Complemental strand, 4894244 - 4894099
Alignment:
Q  482 aattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt---------tttatataaatgtataca 572  Q
    ||||||||| | ||||| ||||||||   ||||||||||||||||||||||| | | |||||||||| || ||         |||| || |||||||  |    
T  4894244 aattgattcaacttgaaactagaaatcgtagcttttgattctataattgattattatactcaaatttattattcaagtcacttttaaatgaatgtatcta 4894145  T
Q  573 aacataattcactttaccttcaattcatttttagctagaatcaatt 618  Q
    ||||||| ||||||||||||||| | | ||||||||||||||||||    
T  4894144 aacataaatcactttaccttcaacttaattttagctagaatcaatt 4894099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 560 - 649
Target Start/End: Complemental strand, 11759859 - 11759770
Alignment:
Q  560 ataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    |||| |||||||||||| ||  || ||||||||||| ||| |||||   | |||||||||||||||||||||||||| ||| ||||||||    
T  11759859 ataagtgtatacaaacacaaaccaatttaccttcaactcacttttaatcaaaatcaattttacaaaatcaattcactcaaactcaatttt 11759770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 12795666 - 12795718
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagc 161  Q
    |||||||||||| ||||||| ||||||||| | ||||||||||||||||||||    
T  12795666 ttggataaacagtttatttgcagtttatagcataagtgcttatcatgataagc 12795718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 535
Target Start/End: Original strand, 22535977 - 22536049
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    |||||||||||||||||||||||||||||| |||||  ||||| ||  ||||||||||| || |||| |||||    
T  22535977 gaattgattttgcctttagaattgattctacttgaatttagaatttgaagcttttgattttagaattaatttt 22536049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 355
Target Start/End: Original strand, 41851486 - 41851670
Alignment:
Q  176 tatttttatagaaaaagataaaacaaagttaaattgttttcgcatac-----aagttgtgtttataagctagattggagtacttatgaaaataagctgaa 270  Q
    ||||| ||||| |||||||| || |||||||||||||||| | |||      ||||||| || | ||||||  |||||| | |||||||| ||||||||     
T  41851486 tatttatataggaaaagatacaataaagttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgag 41851585  T
Q  271 aaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaa 355  Q
    ||| |||   ||||| || |||||| ||||| ||| | |||||||||  |||||  |||||||| ||||||||||||| ||||||    
T  41851586 aaaagcttatgaaaagtgtcataagttgtttccataaattctcccaatcagtctcacaaaacttttgtcaatagataagctcaaa 41851670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 634
Target Start/End: Complemental strand, 42774854 - 42774783
Alignment:
Q  562 aaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattca 634  Q
    |||||||| |||||||||  || ||||||||||| | ||||||||  ||||||||||||||||||||||||||    
T  42774854 aaatgtat-caaacataaaccattttaccttcaacttatttttagtcagaatcaattttacaaaatcaattca 42774783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 234 - 374
Target Start/End: Original strand, 45229525 - 45229665
Alignment:
Q  234 ataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaact 333  Q
    ||||||||  || ||| ||||||||||||||||||||||| |||   ||||| || |||||| | ||||||| |||||||||||   || | ||| ||||    
T  45229525 ataagctatcttcgagaacttatgaaaataagctgaaaaaagctaatgaaaaatgtcataaggtcttttcataagttctcccaaacggtgtggcataact 45229624  T
Q  334 tgtgtcaatagataaactcaaatgagtcaatccaaacaggc 374  Q
    | || || ||||||| ||||||| |  ||||||||||||||    
T  45229625 tatgccagtagataagctcaaatcaaccaatccaaacaggc 45229665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 234 - 377
Target Start/End: Original strand, 4606939 - 4607082
Alignment:
Q  234 ataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaact 333  Q
    ||||||||  |||||| ||||||||||||||||| |||   ||||  ||| | || |||||| ||||||||  |||||||||||  |||||  |||||||    
T  4606939 ataagctatcttggagaacttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttttcacaagttctcccaaatagtctcacaaaact 4607038  T
Q  334 tgtgtcaatagataaactcaaatgagtcaatccaaacaggccct 377  Q
    | | |   ||||||| ||||||| || |||||||||||||||||    
T  4607039 tatattggtagataagctcaaataagccaatccaaacaggccct 4607082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 317
Target Start/End: Original strand, 16451088 - 16451215
Alignment:
Q  188 aaaagataaaacaaagttaaattgttttcgcatacaagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaatt 287  Q
    |||||||||||  ||||||||||||||||  ||| ||| ||| ||  |||||||  |||||| |||  |||||||||||||||||  ||||  ||| | |    
T  16451088 aaaagataaaatgaagttaaattgttttc--atataagctgttttcgtaagctatcttggagaactcgtgaaaataagctgaaaacagctcatgaacaat 16451185  T
Q  288 gacataagctgttttcatgagttctcccaa 317  Q
    | |||||| ||||||||| |||||||||||    
T  16451186 gtcataagttgttttcataagttctcccaa 16451215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 36125372 - 36125446
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcat 305  Q
    ||||||||||| ||||||| ||||||||||||||| | ||||| |||   ||||||||  |||||||||||||||    
T  36125372 tttataagctaaattggagaacttatgaaaataagttaaaaaaagcttacgaaaattgcaataagctgttttcat 36125446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 548
Target Start/End: Original strand, 42740975 - 42741041
Alignment:
Q  482 aattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    ||||||||||| |||||||||  | ||  |||||||||||||| |||||||||| ||||||||||||    
T  42740975 aattgattctacttgaagctaagatttgtagcttttgattctagaattgatttttacactcaaattt 42741041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 497 - 554
Target Start/End: Complemental strand, 33962053 - 33961996
Alignment:
Q  497 aagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    ||||| |||||| ||| |||||||||||||||||||||| | |||||||||| |||||    
T  33962053 aagcttgaaattggagtttttgattctataattgatttttagactcaaatttattgtt 33961996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 446 - 546
Target Start/End: Complemental strand, 2002818 - 2002718
Alignment:
Q  446 ttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaa 545  Q
    |||||||||||| | | |||||||||||||||  |||  |||||||| |||||||||| | ||  || |||| |||||| |||||||||| |||| ||||    
T  2002818 ttggttgctttctagtagaattgattttgcctccagacctgattctacttgaagctaggatttgtagtttttcattctaaaattgatttttacacacaaa 2002719  T
Q  546 t 546  Q
    |    
T  2002718 t 2002718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 571 - 647
Target Start/End: Complemental strand, 4007192 - 4007116
Alignment:
Q  571 caaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||||||| | ||||| | ||||| ||| ||||| | | ||||||||||||||||||||| |||| ||||||||||    
T  4007192 caaacataaattacttttcattcaactcacttttatccataatcaattttacaaaatcaatccacttaaaatcaatt 4007116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 336 - 372
Target Start/End: Complemental strand, 7103427 - 7103391
Alignment:
Q  336 tgtcaatagataaactcaaatgagtcaatccaaacag 372  Q
    ||||||||||||||||||||| |||||||||||||||    
T  7103427 tgtcaatagataaactcaaataagtcaatccaaacag 7103391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 479 - 535
Target Start/End: Original strand, 12037056 - 12037112
Alignment:
Q  479 tagaattgattctagttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    |||||||||||||||||||| ||| || ||  |||||||||||||| ||||||||||    
T  12037056 tagaattgattctagttgaaactaaaatttgtagcttttgattctacaattgatttt 12037112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 12464601 - 12464553
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||| |||||||| | ||||||||||||||| ||||||||||||||||    
T  12464601 tacataagctatttctgtagaaaaagataaaataaagttaaattgtttt 12464553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 27317449 - 27317533
Alignment:
Q  290 cataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggc 374  Q
    |||||| ||||||||| ||||||| |||  |||||   ||||||| ||||  ||||||| ||||||| |||||||||||||||||    
T  27317449 cataagttgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaaataagtcaatccaaacaggc 27317533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 464 - 540
Target Start/End: Complemental strand, 33019261 - 33019185
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacac 540  Q
    |||||||| ||||| ||||||||||| || |||||||||||| ||  |||||||| || || |||||||||| ||||    
T  33019261 aattgattctgcctctagaattgattatatttgaagctagaatttgtagcttttggttttagaattgattttcacac 33019185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 37420303 - 37420216
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgat--tctataattgattttaacactcaaattt 548  Q
    ||||||||||||||| |||||||||||||| | ||| ||||||| |  ||||| | ||  |||| |||||||||| ||||||||||||    
T  37420303 gaattgattttgcctctagaattgattctactagaatctagaaaatgtagcttctaattctctagaattgatttttacactcaaattt 37420216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 43570300 - 43570405
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    |||| ||||||||||||||| || |||||| | |||  ||||||||||||||||||  |  || ||||| || ||||| |||| ||||||  ||||||||    
T  43570300 ttgggtaaacagcttatttgcagcttatagcacaagcacttatcatgataagcgct--tgtataagctaattctatagtaaaatataaaatgaagttaaa 43570397  T
Q  209 ttgttttc 216  Q
    ||||||||    
T  43570398 ttgttttc 43570405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 215
Target Start/End: Complemental strand, 423812 - 423773
Alignment:
Q  176 tatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  423812 tatttttatagaaaaagataaaactaagttatattgtttt 423773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 645
Target Start/End: Complemental strand, 5973654 - 5973619
Alignment:
Q  610 gaatcaattttacaaaatcaattcactaaaaatcaa 645  Q
    ||||||||||||||||||||||||| ||||||||||    
T  5973654 gaatcaattttacaaaatcaattcattaaaaatcaa 5973619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 330 - 377
Target Start/End: Complemental strand, 7928258 - 7928211
Alignment:
Q  330 aacttgtgtcaatagataaactcaaatgagtcaatccaaacaggccct 377  Q
    ||||| ||||||||||||| ||||||| || |||||||||||||||||    
T  7928258 aacttatgtcaatagataagctcaaataagccaatccaaacaggccct 7928211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 9395014 - 9395121
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    ||||||| | ||||||||||  | |||||| | |||  ||||||||||||| | |||||  || || | ||| ||||||||||||||||| |||| ||||    
T  9395014 ttggatacatagcttatttgcggcttatagcacaagctcttatcatgataaacactcatgtataagatttttctatagaaaaagataaaataaagctaaa 9395113  T
Q  209 ttgttttc 216  Q
    ||||||||    
T  9395114 ttgttttc 9395121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 649
Target Start/End: Original strand, 12110918 - 12111001
Alignment:
Q  566 gtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    |||| ||||||||| ||||||||  ||||| ||| ||||| | | ||||||||| |||||||||||||  | ||||||||||||    
T  12110918 gtatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatttgacaaaatcaattctatcaaaatcaatttt 12111001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 13325513 - 13325568
Alignment:
Q  168 acattagctatttttatagaaaaagataaaacaaagttaaattgttttcgcataca 223  Q
    |||| ||||| |||||||||||| ||||||| ||||||||||| |||||| |||||    
T  13325513 acataagctagttttatagaaaatgataaaataaagttaaattattttcgtataca 13325568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 21743857 - 21743814
Alignment:
Q  463 gaattgattttgcctttagaattgattc-tagttgaagctagaa 505  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  21743857 gaattgattttgcctttagacttgattcttagttgaagctagaa 21743814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 648
Target Start/End: Complemental strand, 680296 - 680203
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaattt 648  Q
    ||||| || ||||||| |||||| ||  |||||||||||||| ||| ||| ||  ||| |||| |||||| |||||||||||| |||||||||||    
T  680296 ttttacatgaatgtatgcaaacacaaaacactttaccttcaactcaattt-agacagactcaactttacataatcaattcactcaaaatcaattt 680203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 336 - 378
Target Start/End: Original strand, 1830155 - 1830197
Alignment:
Q  336 tgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    ||||| || |||||||||||| |||||||||||||||||||||    
T  1830155 tgtcagtaaataaactcaaataagtcaatccaaacaggcccta 1830197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 482 - 548
Target Start/End: Original strand, 3352074 - 3352140
Alignment:
Q  482 aattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    |||||||| || |||||| | | ||||  ||||||||||||||||||||||||| |||| |||||||    
T  3352074 aattgattttacttgaagttgggaattgcagcttttgattctataattgattttcacacacaaattt 3352140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 564 - 650
Target Start/End: Original strand, 6767764 - 6767850
Alignment:
Q  564 atgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttta 650  Q
    ||||||| |||| ||| ||||||||| ||||| |||||||||   | ||||||||||||||||||| || | | ||||||| |||||    
T  6767764 atgtatataaacgtaaatcactttacattcaactcatttttaatcacaatcaattttacaaaatcagtttattcaaaatcattttta 6767850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 317
Target Start/End: Original strand, 12289800 - 12289894
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    ||||||| |||||||  || ||||||| ||||||||||||||| ||||||| |||   ||| |||| ||||| ||||||| |  |||||||||||    
T  12289800 aagttgtttttataatttatattggagaacttatgaaaataagttgaaaaaagcttatgaatattgtcataaactgtttttaatagttctcccaa 12289894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 498 - 548
Target Start/End: Original strand, 16488342 - 16488392
Alignment:
Q  498 agctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    ||||||||||| ||||| ||||||||| |||||||| ||||| ||||||||    
T  16488342 agctagaaattggagctgttgattctagaattgattataacaatcaaattt 16488392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 18962163 - 18962117
Alignment:
Q  170 attagctatttttatagaaaaagataaaacaaagttaaattgttttc 216  Q
    ||||||||||||||||  ||||||||||| ||||||||| |||||||    
T  18962163 attagctatttttataacaaaagataaaataaagttaaactgttttc 18962117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 42457844 - 42457938
Alignment:
Q  121 cttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||||||| | |||||| | ||| || |||||||||||||  | ||  || | |||||| ||||| ||||||||||| ||||||||||||||||    
T  42457844 cttatttgtggcttatagcacaagcgcctatcatgataagcatttatgtataatctatttctatagtaaaagataaaataaagttaaattgtttt 42457938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 288
Target Start/End: Complemental strand, 1633539 - 1633494
Alignment:
Q  243 attggagtacttatgaaaataagctgaaaaatgctcgagaaaattg 288  Q
    ||||||| ||||||||||||||||||||||| ||| | ||||||||    
T  1633539 attggagaacttatgaaaataagctgaaaaaggctagtgaaaattg 1633494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 2195909 - 2195946
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaatt 210  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  2195909 agctatttttatagaaaaagataaaatgaagttaaatt 2195946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 15757862 - 15757809
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcg 162  Q
    |||||||||||||||||||  || |||||| | ||| |||||||||||||||||    
T  15757862 ttggataaacagcttattttcagcttatagcacaagcgcttatcatgataagcg 15757809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 40279270 - 40279319
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaa 272  Q
    ||||||| || |||||||| ||||||| |||||||||||| |||||||||    
T  40279270 aagttgttttcataagctatattggagaacttatgaaaattagctgaaaa 40279319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 40279340 - 40279389
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaa 272  Q
    ||||||| || |||||||| ||||||| |||||||||||| |||||||||    
T  40279340 aagttgttttcataagctatattggagaacttatgaaaattagctgaaaa 40279389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 40279410 - 40279459
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaa 272  Q
    ||||||| || |||||||| ||||||| ||||||||||||||| ||||||    
T  40279410 aagttgttttcataagctatattggagaacttatgaaaataagttgaaaa 40279459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 40835487 - 40835524
Alignment:
Q  178 tttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  40835487 tttttatagaaaaagataaaacagagttgaattgtttt 40835524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 44590097 - 44590178
Alignment:
Q  293 aagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggc 374  Q
    ||||||||||||| ||||||  |||   ||||  |||||||| |||| |||||||||||||||| || ||||||||| ||||    
T  44590097 aagctgttttcataagttctttcaaacggtctcacaaaacttatgtctatagataaactcaaataagccaatccaaagaggc 44590178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 7e-30; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 463 - 554
Target Start/End: Complemental strand, 1485252 - 1485161
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||    
T  1485252 gaattaattttgcctttagaattgattctacttgaatctagaaattggagcttttgattctagaattgattttaacactcaaatttattgtt 1485161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 405 - 614
Target Start/End: Original strand, 34620807 - 34621025
Alignment:
Q  405 ccaaaattgattctatagcggtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctaga 504  Q
    ||||||||||||||| ||  |||||||||| | | ||| |||||||| || |  ||| ||||| |||||||||   ||||||||||||  ||||||||||    
T  34620807 ccaaaattgattctaaaggtgtagaattgattttgacatgtttggttcctataaactagaattaattttgcctccggaattgattctacatgaagctaga 34620906  T
Q  505 aattagagcttttgattctataattgattttaacactcaaatttgttgt---------ttttatataaatgtatacaaacataattcactttaccttcaa 595  Q
    ||| | ||||| |||||||| |||||||||| ||||| |||||| || |         ||||| |||||||||| ||||||||| |||||||||||||||    
T  34620907 aatcatagcttctgattctagaattgatttttacactaaaatttatttttcaactcacttttacataaatgtatccaaacataaatcactttaccttcaa 34621006  T
Q  596 ttcatttttagctagaatc 614  Q
     ||| || |||| ||||||    
T  34621007 ctcaattctagccagaatc 34621025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 405 - 614
Target Start/End: Original strand, 34748244 - 34748462
Alignment:
Q  405 ccaaaattgattctatagcggtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctaga 504  Q
    ||||||||||||||| ||  |||||||||| | | ||| |||||||| || |  ||| ||||| |||||||||   ||||||||||||  ||||||||||    
T  34748244 ccaaaattgattctaaaggtgtagaattgattttgacatgtttggttcctataaactagaattaattttgcctccggaattgattctacatgaagctaga 34748343  T
Q  505 aattagagcttttgattctataattgattttaacactcaaatttgttgt---------ttttatataaatgtatacaaacataattcactttaccttcaa 595  Q
    ||| | ||||| |||||||| |||||||||| ||||| |||||| || |         ||||| |||||||||| ||||||||| |||||||||||||||    
T  34748344 aatcatagcttctgattctagaattgatttttacactaaaatttatttttcaactcacttttacataaatgtatccaaacataaatcactttaccttcaa 34748443  T
Q  596 ttcatttttagctagaatc 614  Q
     ||| || |||| ||||||    
T  34748444 ctcaattctagccagaatc 34748462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 406 - 548
Target Start/End: Original strand, 2234437 - 2234579
Alignment:
Q  406 caaaattgattctatagcggtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaa 505  Q
    ||||||||||||||||   |||||| ||| |  |||| ||| | || ||||| | | |||||||||||||||| | ||||||||| | ||||||||| ||    
T  2234437 caaaattgattctataagtgtagaactgattcaaacatgttcgattactttcgagtagaattgattttgccttcaaaattgattcaacttgaagctaaaa 2234536  T
Q  506 attagagcttttgattctataattgattttaacactcaaattt 548  Q
    | |  |||||||||||||| |||||||||||||||||||||||    
T  2234537 actgaagcttttgattctagaattgattttaacactcaaattt 2234579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 264255 - 264363
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    |||||| ||||||| ||||| || |||||| | ||||||||||||||||||| ||| ||| || |||||||| || || ||||||||||| |||||||||    
T  264255 ttggattaacagctaatttgcagcttatagcacaagtgcttatcatgataagtgcttatatataagctatttctaaagcaaaagataaaataaagttaaa 264354  T
Q  209 ttgttttcg 217  Q
    | |||||||    
T  264355 tcgttttcg 264363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 253 - 378
Target Start/End: Original strand, 848022 - 848146
Alignment:
Q  253 ttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactc 352  Q
    ||||||||||||||||||||| |||  |||||| || ||||||| ||||| || |||||| ||||  |||||  |||||||| || | |||||||| |||    
T  848022 ttatgaaaataagctgaaaaaagcttaagaaaaatgtcataagcagtttttataagttcttccaaacagtctcacaaaacttatg-ctatagataagctc 848120  T
Q  353 aaatgagtcaatccaaacaggcccta 378  Q
    |||| || ||||||||||||||||||    
T  848121 aaataaggcaatccaaacaggcccta 848146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 554 - 649
Target Start/End: Original strand, 1499979 - 1500074
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||| |||||||||| ||||||||| ||| |||||  |||| ||  ||||||| | |||||||||||||||||||||||| | ||||||||||||    
T  1499979 ttttacataaatgtattcaaacataaatcaatttacactcaactcgcttttagccaaaatcaattttacaaaatcaattcagtcaaaatcaatttt 1500074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 470 - 554
Target Start/End: Complemental strand, 30926878 - 30926793
Alignment:
Q  470 ttttgcctttagaattgattctag-ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    ||||| ||||||||| |||||||  ||||||||||||||| ||| |||| |||||| |||||||||| |||||||||||| |||||    
T  30926878 ttttggctttagaatggattctaacttgaagctagaaattggagttttttattctagaattgatttttacactcaaatttattgtt 30926793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 494 - 649
Target Start/End: Original strand, 9505780 - 9505944
Alignment:
Q  494 ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgt---------ttttatataaatgtatacaaacataattcac 584  Q
    |||||| |||||||| |||||||||||||||| ||||||||| | |||||||||| ||||         ||||| || ||| ||||  ||||||  ||||    
T  9505780 ttgaagatagaaattggagcttttgattctatgattgatttttaaactcaaatttattgttcaacacacttttacatgaatatataataacatatatcac 9505879  T
Q  585 tttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||| ||||||| ||| ||||||| | ||| || |||||| |||||||||| | ||||||||||||    
T  9505880 tttgccttcaactcaattttagccaaaataaactttacagaatcaattcattcaaaatcaatttt 9505944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 4163097 - 4163164
Alignment:
Q  147 cttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttt 214  Q
    ||||||||||||| | || | |||| ||||||||||||||||| |||||||| |||||||||||||||    
T  4163097 cttatcatgataaacacttacacataagctatttttatagaaatagataaaataaagttaaattgttt 4163164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 4224718 - 4224785
Alignment:
Q  147 cttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttt 214  Q
    ||||||||||||| | || | |||| ||||||||||||||||| |||||||| |||||||||||||||    
T  4224718 cttatcatgataaacacttacacataagctatttttatagaaatagataaaataaagttaaattgttt 4224785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 403 - 546
Target Start/End: Complemental strand, 5724796 - 5724653
Alignment:
Q  403 ggccaaaattgattctatagcggtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagcta 502  Q
    |||||||||| |||||| |   |||||||||| | | ||| |||||| |||||||   | |||||||||||||||  | ||||||||||| |||||||||    
T  5724796 ggccaaaattaattctagaagtgtagaattgattctgacatgtttggatgctttcaggtagaattgattttgcctccaaaattgattctacttgaagcta 5724697  T
Q  503 gaaattagagcttttgattctataattgattttaacactcaaat 546  Q
    | | ||  | ||||| ||||||||||||||||| |||| |||||    
T  5724696 ggatttgtaactttttattctataattgatttttacacacaaat 5724653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 480 - 554
Target Start/End: Original strand, 34898691 - 34898766
Alignment:
Q  480 agaattgattctagttgaagctagaaattagag-cttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||| ||||||||||||||||| ||||| |||||    
T  34898691 agaatcgattctacttgaagctagaaattagagtttttttattctagaattgattttaacactcgaatttattgtt 34898766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 376
Target Start/End: Complemental strand, 35070708 - 35070568
Alignment:
Q  232 ttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaa 331  Q
    ||||||||||  |||||| ||||||||||| ||||  ||||| ||| | |||||||| |||||||||||||| | ||||||| |    |||||  ||| |    
T  35070708 ttataagctattttggagaacttatgaaaacaagcccaaaaaagcttgtgaaaattgtcataagctgttttcgtaagttctctc----agtctcacaaga 35070613  T
Q  332 cttgtgtcaatagataaactcaaatgagtcaatccaaacaggccc 376  Q
    |||||| || ||| ||| ||||||| || ||||||||||||||||    
T  35070612 cttgtgccagtaggtaagctcaaataagccaatccaaacaggccc 35070568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 9093704 - 9093634
Alignment:
Q  147 cttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttttcg 217  Q
    |||||||||||||||||| ||  || |||||||| ||||  ||||||||||| ||||||||||||||||||    
T  9093704 cttatcatgataagcgcttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcg 9093634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 297 - 371
Target Start/End: Complemental strand, 10645378 - 10645304
Alignment:
Q  297 tgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaaca 371  Q
    ||||||||| |||||||||||  |||||| |||||||| ||||| ||||||| ||||||| || |||||||||||    
T  10645378 tgttttcataagttctcccaaacagtcttacaaaacttatgtcattagataacctcaaattagccaatccaaaca 10645304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 35098297 - 35098235
Alignment:
Q  446 ttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaatt 508  Q
    |||||||||||| ||| |||||||||||||||  | ||||||||||| |||||||||||||||    
T  35098297 ttggttgctttcaactagaattgattttgcctacaaaattgattctaattgaagctagaaatt 35098235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 571 - 636
Target Start/End: Original strand, 7953079 - 7953144
Alignment:
Q  571 caaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcact 636  Q
    ||||||||| ||||||||||||||| ||| |||| || |||||||||||| || ||||||||||||    
T  7953079 caaacataaatcactttaccttcaactcaattttggccagaatcaatttttcataatcaattcact 7953144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 563 - 647
Target Start/End: Complemental strand, 46285 - 46201
Alignment:
Q  563 aatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||||| |||||| || | ||||||  | ||| ||| |||||| |||||||||||||||| |||||||||||| ||||||||||    
T  46285 aatgtatccaaacacaaataactttaattgcaactcacttttagttagaatcaattttacagaatcaattcactcaaaatcaatt 46201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 563 - 647
Target Start/End: Complemental strand, 765382 - 765298
Alignment:
Q  563 aatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    |||||||  ||||| || ||||||||| ||||| | | |||||| |||||||||||||||| ||||| |||||| ||||||||||    
T  765382 aatgtatggaaacacaaatcactttactttcaacttacttttagttagaatcaattttacacaatcatttcactcaaaatcaatt 765298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 10874507 - 10874555
Alignment:
Q  497 aagctagaaattagagcttttgattctataattgattttaacactcaaa 545  Q
    |||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  10874507 aagctagaaattagagcttttgattctagaattgatttttacattcaaa 10874555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 572 - 647
Target Start/End: Complemental strand, 3436871 - 3436796
Alignment:
Q  572 aaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    |||||||| ||||| |||| | ||||| ||||||| |  ||||||||||| |||||||| ||||||||||||||||    
T  3436871 aaacataaatcactataccgtaaattcttttttagttgaaatcaattttataaaatcaactcactaaaaatcaatt 3436796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 494 - 548
Target Start/End: Complemental strand, 31305922 - 31305868
Alignment:
Q  494 ttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    ||||||||| ||||| ||||||||||||||| |||||||||  ||||||||||||    
T  31305922 ttgaagctaaaaattggagcttttgattctagaattgatttatacactcaaattt 31305868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 290 - 378
Target Start/End: Original strand, 6538584 - 6538672
Alignment:
Q  290 cataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    |||||||||||||||| | ||||||| |  |||||  | |||||| || || || |||||||||||| || ||||||||||||||||||    
T  6538584 cataagctgttttcatcaattctcccgaacagtctcaccaaacttatgccactacataaactcaaataagacaatccaaacaggcccta 6538672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 8147644 - 8147692
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||| |||||||||||||| ||||||||||| |||||| |||||||||    
T  8147644 tacataagctatttttatagcaaaagataaaataaagttgaattgtttt 8147692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 9559723 - 9559619
Alignment:
Q  113 ataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgt 212  Q
    ||||||| | |||||| |||||||||   ||| | |||||| |||||||||| ||  || || ||||| ||||| ||||||||||| ||| |||||||||    
T  9559723 ataaacaacctatttgcagtttatagctcaagagtttatcaagataagcgcttatgtataagttatttctatagcaaaagataaaataaatttaaattgt 9559624  T
Q  213 tttcg 217  Q
    |||||    
T  9559623 tttcg 9559619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 24626237 - 24626285
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||| |||||||| ||||| ||| ||||||||||||||||||||||||    
T  24626237 tacataagctatttctataggaaaggataaaacaaagttaaattgtttt 24626285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 463 - 535
Target Start/End: Original strand, 26280584 - 26280656
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    |||||||||||||||  ||||||||||| | |||||||||||| ||  || ||||||||| | ||||||||||    
T  26280584 gaattgattttgcctcaagaattgattccacttgaagctagaatttgtagtttttgattccaaaattgatttt 26280656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 31623502 - 31623546
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattg 211  Q
    ||||||||||||||||||||||||||||||||  | |||||||||    
T  31623502 tacattagctatttttatagaaaaagataaaatgacgttaaattg 31623546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 290 - 378
Target Start/End: Complemental strand, 34404726 - 34404638
Alignment:
Q  290 cataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    |||||| | ||||||| ||||||||||| || ||   |||||||| ||||| | ||||||||||||| ||| ||||||||||| |||||    
T  34404726 cataagatattttcataagttctcccaaagactcacacaaaacttatgtcagttgataaactcaaataagtaaatccaaacagccccta 34404638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 35070758 - 35070710
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||| |||||||||||||||||||||||||| ||| | ||||||||||    
T  35070758 tacataagctatttttatagaaaaagataaaataaaataaaattgtttt 35070710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 555
Target Start/End: Original strand, 852512 - 852603
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgttt 555  Q
    |||| |||||||||  | ||||||||| | |||||||||||||||  || || |||||||| |||||||||| |||| ||||| | ||||||    
T  852512 aatttattttgcctccataattgattcaacttgaagctagaaattgtaggttctgattctagaattgatttttacacccaaatgtattgttt 852603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 618
Target Start/End: Original strand, 882774 - 882829
Alignment:
Q  563 aatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaatt 618  Q
    ||||||| ||||||||| ||| ||||||||||| ||| ||||| ||||||||||||    
T  882774 aatgtatccaaacataaatcattttaccttcaactcaattttaactagaatcaatt 882829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 649
Target Start/End: Original strand, 3525004 - 3525099
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||| |||||||||| |||| ||||  || ||| | ||||| ||| ||||||| | ||||||||||||| |||||||||| | ||||| ||||||    
T  3525004 ttttacataaatgtattcaaatataaaccagtttgcattcaactcacttttagccacaatcaattttacataatcaattcattcaaaattaatttt 3525099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 632
Target Start/End: Original strand, 22692639 - 22692714
Alignment:
Q  557 tatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaatt 632  Q
    |||||||||| || ||| ||||| ||||||||  || |||||| |||| || ||| ||||||||||||||||||||    
T  22692639 tatataaatgcatgcaagcataaatcactttaaatttaattcacttttcgcaagattcaattttacaaaatcaatt 22692714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 10400859 - 10400729
Alignment:
Q  406 caaaattgattctatagcggtagaattgagtataacaagtttggtt-gctttccacttgaattgattttgcctttagaattgattctagttgaagctaga 504  Q
    |||||||||||||| ||  ||| |||||| | | | | |||||||| |||||| | | |||||| |||||||  ||||||| ||||||||||||| |||     
T  10400859 caaaattgattctagaggtgtataattgattttgatatgtttggtttgctttcgagtagaattgtttttgccactagaattaattctagttgaagttagg 10400760  T
Q  505 aattagagcttttgattctataattgatttt 535  Q
    | ||  ||| |||||||||| ||||||||||    
T  10400759 atttctagcctttgattctaaaattgatttt 10400729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 601 - 647
Target Start/End: Original strand, 20871627 - 20871673
Alignment:
Q  601 ttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||| ||| ||||||||||||| |||||||||| ||||||||||||    
T  20871627 ttttatctaaaatcaattttacacaatcaattcaataaaaatcaatt 20871673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 342 - 376
Target Start/End: Complemental strand, 30536913 - 30536879
Alignment:
Q  342 tagataaactcaaatgagtcaatccaaacaggccc 376  Q
    ||||||||||||||| |||||||||||||||||||    
T  30536913 tagataaactcaaataagtcaatccaaacaggccc 30536879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 466 - 534
Target Start/End: Complemental strand, 3436986 - 3436917
Alignment:
Q  466 ttgattttgccttt-agaattgattctagttgaagctagaaattagagcttttgattctataattgattt 534  Q
    |||||||||| ||| | ||||||||||||||||| ||| || ||  | ||||||||||||||||||||||    
T  3436986 ttgattttgcttttcaaaattgattctagttgaatctataatttgtaacttttgattctataattgattt 3436917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 4910887 - 4910972
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    ||||||||| |||||  | ||||||||||| |||||||||  | ||  |||||||||||||| |||||||||| |||  |||||||    
T  4910887 gaattgattctgcctcaaaaattgattctacttgaagctatgatttgtagcttttgattctagaattgattttcacatacaaattt 4910972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 464 - 524
Target Start/End: Complemental strand, 6544604 - 6544543
Alignment:
Q  464 aattgattttgcctttagaattgattct-agttgaagctagaaattagagcttttgattcta 524  Q
    ||||||||||||||| |||||||||||| | |||||||||||| |  |||||||||| ||||    
T  6544604 aattgattttgccttcagaattgattctaacttgaagctagaactcggagcttttgactcta 6544543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 463 - 540
Target Start/End: Complemental strand, 6654196 - 6654119
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacac 540  Q
    ||||||||||| |||| |||||| |||||| |||||||||| | ||  ||||||| |||||| | |||||||| ||||    
T  6654196 gaattgatttttccttcagaattaattctacttgaagctaggatttgtagcttttaattctagatttgattttcacac 6654119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 31624996 - 31624959
Alignment:
Q  235 taagctagattggagtacttatgaaaataagctgaaaa 272  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  31624996 taagctatattggagaacttatgaaaataagctgaaaa 31624959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 31671182 - 31671153
Alignment:
Q  187 aaaaagataaaacaaagttaaattgttttc 216  Q
    ||||||||||||||||||||||||||||||    
T  31671182 aaaaagataaaacaaagttaaattgttttc 31671153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 33117463 - 33117532
Alignment:
Q  146 gcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||||||| |||||| || || ||| ||||| |||||||| |||| ||||||  |||||||||||||||    
T  33117463 gcttatcataataagcacttatgcataagctacttttatagcaaaatataaaattaagttaaattgtttt 33117532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 511 - 548
Target Start/End: Complemental strand, 34027475 - 34027438
Alignment:
Q  511 agcttttgattctataattgattttaacactcaaattt 548  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  34027475 agcttttgattctagaattgatttttacactcaaattt 34027438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 320 - 377
Target Start/End: Complemental strand, 35069582 - 35069525
Alignment:
Q  320 agtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggccct 377  Q
    |||||| |||||||| ||||| ||||||| ||||||| || |||| ||||||||||||    
T  35069582 agtcttacaaaacttatgtcagtagataagctcaaataagccaatacaaacaggccct 35069525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 7e-30; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 485 - 647
Target Start/End: Complemental strand, 35264495 - 35264324
Alignment:
Q  485 tgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttg---------tttttatataaatgtatacaaac 575  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| |||         |||||| || ||||||  |||||    
T  35264495 tgattctacttgaaactagaaattagagcttttgattctagaattgattttaacacttaaatttattgttcaagtcatttttacatgaatgtacccaaac 35264396  T
Q  576 ataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    |||| ||||||||| ||||| ||| |||| | || ||||||||||||| |||||||||||| ||||||||||    
T  35264395 ataactcactttactttcaactcacttttggttacaatcaattttacagaatcaattcactcaaaatcaatt 35264324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 463 - 546
Target Start/End: Original strand, 35058340 - 35058423
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaat 546  Q
    |||||||||||||||  ||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  35058340 gaattgattttgcctcaagaattgattctacttggagctagaaattcgagcttttgattctagaattgattttaacactcaaat 35058423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 115 - 375
Target Start/End: Complemental strand, 402721 - 402457
Alignment:
Q  115 aaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttt 214  Q
    ||||| |||||||| || | |||| | ||||||||||||||||||| ||| ||  || |||||||| |||||||||||||||   ||| |||||||||||    
T  402721 aaacaacttatttgcagctcatagcacaagtgcttatcatgataagggcttatgtataagctatttctatagaaaaagataatt-aaatttaaattgttt 402623  T
Q  215 tcgcatac-----aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagt 309  Q
    ||| |||      ||| ||| ||||||| |||  ||| || |||| ||||| |||||||||||  |||   ||| | || ||||||||||||||||  ||    
T  402622 tcgtataagttataagctgtttttataatctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctgttttcatacgt 402523  T
Q  310 tctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcc 375  Q
    ||||||||  ||||||||||||||| ||| | | |||||||||||||  ||||| |||||||||||    
T  402522 tctcccaaacagtcttgcaaaacttatgttagttgataaactcaaataggtcaacccaaacaggcc 402457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 464 - 645
Target Start/End: Complemental strand, 37335139 - 37334949
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt--------- 554  Q
    ||||||||||||||  |||||||||| || | |||| |||||||   |||||||||||||| |||||||||| |||||  ||||  |||||             
T  37335139 aattgattttgcctcgagaattgattttactagaagttagaaatcgtagcttttgattctagaattgatttttacacttgaattcattgttcaactcatt 37335040  T
Q  555 tttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaa 645  Q
    ||||||| ||||||| || |||||| ||||||||||||||| ||| ||||||   |||||||||||| | |||||||||||| ||||||||    
T  37335039 tttatatgaatgtattcagacataaatcactttaccttcaactcaattttagtcggaatcaattttatataatcaattcacttaaaatcaa 37334949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 167 - 371
Target Start/End: Original strand, 20880419 - 20880627
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattgttttcgcatac-----aagttgtgtttataagctagattggagtacttatgaaaa 261  Q
    ||||| |||||||||||||| ||| |||||||||| ||||||||||||| | |||      ||  ||| |||| |||||| ||||||| |||||||||||    
T  20880419 tacataagctatttttatagcaaatgataaaacaa-gttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaa 20880517  T
Q  262 taagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtc 361  Q
    |||||| ||||| |||   |||||||| ||||||||||||||||  ||||||||||  |||||    |||||| ||  | ||||||| ||||||| || |    
T  20880518 taagctcaaaaaagcttatgaaaattgtcataagctgttttcataggttctcccaaatagtctaaggaaacttatgcaagtagataagctcaaataagcc 20880617  T
Q  362 aatccaaaca 371  Q
    ||||||||||    
T  20880618 aatccaaaca 20880627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 463 - 554
Target Start/End: Original strand, 36302162 - 36302253
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||||||||||||||| ||| ||||||||| ||||||||||| ||| ||| |||||||| || ||||||||||| |||| |||||| |||||    
T  36302162 gaattgattttgccttcagagttgattctatttgaagctagagattggagattttgattttagaattgattttagcacttaaatttattgtt 36302253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 463 - 554
Target Start/End: Complemental strand, 44958712 - 44958621
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||||||||||||||  ||| ||||||||| | || |||||||||| ||||||||||||||| || |||||||||||||||| ||| |||||    
T  44958712 gaattgattttgcctccagagttgattctactcgatgctagaaattggagcttttgattctagaaatgattttaacactcaactttattgtt 44958621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 30443904 - 30443978
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcat 305  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||    
T  30443904 tttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcataagctgttttcat 30443978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 587 - 643
Target Start/End: Original strand, 50427184 - 50427240
Alignment:
Q  587 taccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatc 643  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  50427184 taccttcaactcatttttagctagaatcaattttacaaattcaattcacttaaaatc 50427240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 317
Target Start/End: Original strand, 21367637 - 21367764
Alignment:
Q  195 aaaacaaagttaaattgttttcgcatac-----aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattga 289  Q
    |||| |||||||||||||||||| |||      ||||||| || ||||||||  |||||| ||||||||||||||||||||||  ||| | ||| | ||     
T  21367637 aaaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgt 21367736  T
Q  290 cataagctgttttcatgagttctcccaa 317  Q
    |||||||||||||||| |||||||||||    
T  21367737 cataagctgttttcataagttctcccaa 21367764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 378
Target Start/End: Original strand, 39980732 - 39980887
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagt 322  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||| ||||||| |||   ||||   | |||||||||||||||| |||||||  ||  |||    
T  39980732 aagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttctcttaaacagt 39980831  T
Q  323 cttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    ||  |||||||| ||  | ||||||| ||||||  || |||||||||||| |||||    
T  39980832 ctcacaaaacttatgctagtagataagctcaaacaagccaatccaaacagacccta 39980887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 253 - 367
Target Start/End: Complemental strand, 31365225 - 31365111
Alignment:
Q  253 ttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactc 352  Q
    |||||||||| || ||||||| |||   |||||||| ||||||||| |||||| |||||||||||  |||||  |||||||| || |||||||||| |||    
T  31365225 ttatgaaaatgagttgaaaaaagcttatgaaaattgtcataagctgctttcataagttctcccaaacagtctcacaaaacttatgccaatagataagctc 31365126  T
Q  353 aaatgagtcaatcca 367  Q
    |||| || |||||||    
T  31365125 aaataagccaatcca 31365111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 463 - 554
Target Start/End: Complemental strand, 30301105 - 30301013
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagag-cttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||||||||||||||  | |||||| |||| ||||||||||||||| |||  |||| |||||| ||||| ||||||||||||||||| |||||    
T  30301105 gaattgattttgcctccaaaattgactctatttgaagctagaaattggagttttttaattctagaattggttttaacactcaaatttattgtt 30301013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 469 - 541
Target Start/End: Complemental strand, 40147950 - 40147878
Alignment:
Q  469 attttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacact 541  Q
    |||||| ||| ||||||||||||| || ||||||||| || ||||||||||||||| ||||||||| ||||||    
T  40147950 attttgtcttcagaattgattctacttcaagctagaatttggagcttttgattctagaattgatttcaacact 40147878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 554 - 641
Target Start/End: Complemental strand, 584799 - 584712
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaa 641  Q
    ||||| |||||||||| |||||| || ||  |||| |||||| | | ||||||||| |||||||||||||||||||||||||| ||||    
T  584799 ttttacataaatgtatccaaacagaaatccatttagcttcaacttaattttagctaaaatcaattttacaaaatcaattcactcaaaa 584712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 34638113 - 34638042
Alignment:
Q  147 cttatcatgataagcgctcatacattagctatttttatagaaaaagataaaa-caaagttaaattgttttcg 217  Q
    ||||||||||||| |||| ||| || |||||||| |||||||||||||||||  ||||||||||||||||||    
T  34638113 cttatcatgataaccgcttatatataagctatttctatagaaaaagataaaattaaagttaaattgttttcg 34638042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 311
Target Start/End: Complemental strand, 36631173 - 36631030
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgttttcgca-----tacaagttgtgtttataagctagattggagtacttatgaaaataagct 267  Q
    |||||||| ||||| ||| ||||||  |||||||||||||||| | |     || ||||||| ||||| ||||| ||||||| ||||||||||||||||     
T  36631173 agctatttctatagtaaaggataaagtaaagttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataagca 36631074  T
Q  268 gaaaaatgctcgagaaaattgacataagctgttttcatgagttc 311  Q
    |||||| |||   |||||| | ||||||||| |||||| |||||    
T  36631073 gaaaaaagcttttgaaaatcgtcataagctggtttcataagttc 36631030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 305
Target Start/End: Original strand, 43062618 - 43062776
Alignment:
Q  147 cttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttttcgc-atacaagttgtgtttataagctagatt 245  Q
    |||||| ||||||| ||| || ||| ||| ||||||| ||||||||||||||||  ||| || |||||  |  ||||||| ||| |||| ||| || |||    
T  43062618 cttatcgtgataagtgcttatgcataagccatttttaaagaaaaagataaaacatcgtttaaatgtttgtgtgatacaagctgtttttacaag-tatatt 43062716  T
Q  246 ggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcat 305  Q
    |||| ||||||||||| ||||||||||| ||| | |||||||| ||||  ||||||||||    
T  43062717 ggagaacttatgaaaagaagctgaaaaaagcttgtgaaaattgccatatactgttttcat 43062776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 565 - 647
Target Start/End: Complemental strand, 31766242 - 31766160
Alignment:
Q  565 tgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||| ||||||||| |||||||| |||||| ||| ||||| | | ||| |||||||||||||||||||| | ||||||||||    
T  31766242 tgtatccaaacataaatcactttaacttcaactcacttttatccaaaattaattttacaaaatcaattcattcaaaatcaatt 31766160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 554 - 648
Target Start/End: Original strand, 32112073 - 32112167
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaattt 648  Q
    ||||| ||||||  || ||||||||| | ||||| | ||||| ||||||||| | | ||||||||||||| |||||||||||| |||||||||||    
T  32112073 ttttacataaataaatccaaacataaattacttttcattcaactcatttttatccataatcaattttacataatcaattcactcaaaatcaattt 32112167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 34235262 - 34235164
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaa 207  Q
    ||||||||||| ||||||||||| |||||||| | |||||||||||||||||| || ||  |  ||||||||  |||| |||| |||||| ||||||||    
T  34235262 ttggataaacaacttatttgtagcttatagtacatgtgcttatcatgataagcacttatgtagaagctatttccatagcaaaatataaaataaagttaa 34235164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 379
Target Start/End: Original strand, 901930 - 902082
Alignment:
Q  226 ttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtctt 325  Q
    |||| ||||||||||| ||||||| ||||||||||||||| ||||||| |||   | ||| ||  || |||||||||||| |||| ||||||  || |      
T  901930 ttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatggaaaatgttattagctgttttcataagttttcccaaacagccac 902029  T
Q  326 gcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggccctag 379  Q
    ||||||||| || || ||||||| ||||||| |  |||||||||||| ||||||    
T  902030 gcaaaacttctg-cactagataagctcaaataaagcaatccaaacagaccctag 902082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 486 - 618
Target Start/End: Original strand, 3776524 - 3776665
Alignment:
Q  486 gattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttg---------tttttatataaatgtatacaaaca 576  Q
    ||||||| ||||| |||||||||  ||||| |||||||| |||| ||||| ||||||||||||||||          ||||| || ||||||| ||| ||    
T  3776524 gattctacttgaatctagaaattgtagcttctgattctagaattaatttttacactcaaatttgttgctgaactcacttttacatcaatgtatccaagca 3776623  T
Q  577 taattcactttaccttcaattcatttttagctagaatcaatt 618  Q
    ||| ||||||||| ||||| ||| ||||||| ||||||||||    
T  3776624 taaatcactttacattcaactcaattttagccagaatcaatt 3776665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 571 - 647
Target Start/End: Original strand, 42644302 - 42644379
Alignment:
Q  571 caaacataattcactttaccttcaattcatttttagctagaatcaatttt-acaaaatcaattcactaaaaatcaatt 647  Q
    ||||||||| ||||||||| ||||| ||| ||||| ||| |||||||||| | |||||||||||||| ||||||||||    
T  42644302 caaacataaatcactttacattcaactcacttttaactaaaatcaatttttataaaatcaattcactcaaaatcaatt 42644379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 494 - 555
Target Start/End: Original strand, 51285580 - 51285641
Alignment:
Q  494 ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgttt 555  Q
    ||||||||| |||| | |||||||||||||| ||||||||||  ||||||||||||||||||    
T  51285580 ttgaagctaaaaatcacagcttttgattctagaattgatttttgcactcaaatttgttgttt 51285641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 523
Target Start/End: Complemental strand, 7717427 - 7717367
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattct 523  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||  ||||| |||||||    
T  7717427 gaattgattttgcctccagaattgattctacttgaagctagaaattgtagcttctgattct 7717367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 31403242 - 31403350
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    |||||||||||| ||||||| ||||| |||   ||||||||||||| |||||| || ||| || ||||||||  |||  |||||||||||  ||||||||    
T  31403242 ttggataaacaggttatttgcagtttctagcccaagtgcttatcatcataagcacttatatataagctatttccatatcaaaagataaaatgaagttaaa 31403341  T
Q  209 ttgttttcg 217  Q
     ||||||||    
T  31403342 atgttttcg 31403350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 538
Target Start/End: Complemental strand, 41115468 - 41115392
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagctttt-gattctataattgattttaac 538  Q
    ||||||||||||| | |||||||||||||| |||||||||||| ||  ||||||| | ||||| |||||||||||||    
T  41115468 gaattgattttgcttgtagaattgattctacttgaagctagaatttgtagcttttggcttctacaattgattttaac 41115392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 46853593 - 46853549
Alignment:
Q  510 gagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  46853593 gagcttttgattctagaattgattttaacactcaaatttattgtt 46853549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 9832755 - 9832672
Alignment:
Q  290 cataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacagg 373  Q
    |||||||||||||||  |||||||||||  ||| |  |||||||| |||||||| |||| ||||||| |||||||| |||||||    
T  9832755 cataagctgttttcaaaagttctcccaaacagtttgacaaaacttatgtcaataaataagctcaaataagtcaatctaaacagg 9832672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 464 - 554
Target Start/End: Complemental strand, 25359679 - 25359589
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||||||| |||||  ||||||||||||| |||||| ||||| ||  || |||| ||||||||||||||||| |||| || |||| |||||    
T  25359679 aattgattctgcctccagaattgattctacttgaagttagaatttgtagttttttattctataattgattttcacacacatatttattgtt 25359589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 31365318 - 31365232
Alignment:
Q  281 gaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatcca 367  Q
    |||||||| |||||||||| ||||| |||||||||||  ||| |  ||||| || || |||||||||||||||||| || |||||||    
T  31365318 gaaaattgtcataagctgtattcataagttctcccaaacagtgtcacaaaaattatgccaatagataaactcaaataagccaatcca 31365232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 566 - 632
Target Start/End: Complemental strand, 52925617 - 52925551
Alignment:
Q  566 gtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaatt 632  Q
    |||| |||||||||  |||||||| ||||| ||| ||||||  ||||||||||||||||||||||||    
T  52925617 gtatccaaacataaaccactttactttcaactcaattttagtgagaatcaattttacaaaatcaatt 52925551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 636
Target Start/End: Complemental strand, 1441404 - 1441331
Alignment:
Q  563 aatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcact 636  Q
    |||||||  ||||| || ||||||||| ||||| ||| ||||||  ||||||||||||||||||| ||||||||    
T  1441404 aatgtatctaaacacaaatcactttacgttcaactcacttttagacagaatcaattttacaaaattaattcact 1441331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 25447208 - 25447163
Alignment:
Q  327 caaaacttgtgtcaatagataaactcaaatgagtcaatccaaacag 372  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||    
T  25447208 caaaacttatgtcagtagataaactcaaataagtcaatccaaacag 25447163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 632
Target Start/End: Complemental strand, 25577757 - 25577696
Alignment:
Q  571 caaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaatt 632  Q
    ||||||||| | |||||||||||||||||  |||| || |||||||||| ||||||||||||    
T  25577757 caaacataaataactttaccttcaattcaagtttatcttgaatcaatttcacaaaatcaatt 25577696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 30956822 - 30956706
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcat----------acattagctatttttatagaaaaagataaaa 198  Q
    |||||||||||||||||||| || |||||| | ||| ||||||||||||||||  | ||          |||| |||||||| ||||| |||||||||||    
T  30956822 ttggataaacagcttatttgcagcttatagcacaagggcttatcatgataagcatttatgcataagcttacataagctatttctatagcaaaagataaaa 30956723  T
Q  199 caaagttaaattgtttt 215  Q
     ||||||||||||||||    
T  30956722 taaagttaaattgtttt 30956706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 30972634 - 30972518
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcat----------acattagctatttttatagaaaaagataaaa 198  Q
    |||||||||||||||||||| || |||||| | ||| ||||||||||||||||  | ||          |||| |||||||| ||||| |||||||||||    
T  30972634 ttggataaacagcttatttgcagcttatagcacaagggcttatcatgataagcatttatgcataagcttacataagctatttctatagcaaaagataaaa 30972535  T
Q  199 caaagttaaattgtttt 215  Q
     ||||||||||||||||    
T  30972534 taaagttaaattgtttt 30972518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 371
Target Start/End: Original strand, 32582816 - 32582888
Alignment:
Q  296 ctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaaca 371  Q
    ||||||||||||||||||||||  |||||   ||||||| ||  | ||||||||||||||| ||||||||||||||    
T  32582816 ctgttttcatgagttctcccaaacagtct---aaaacttatggtagtagataaactcaaataagtcaatccaaaca 32582888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 24684951 - 24684903
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||| |||||||||||||||||||||||||| ||| || |||||||||    
T  24684951 tacataagctatttttatagaaaaagataaaataaattttaattgtttt 24684903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 583 - 647
Target Start/End: Original strand, 30958145 - 30958209
Alignment:
Q  583 actttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||||| ||||| |||  |||||| | |||||||||||||||||||||||| | ||||||||||    
T  30958145 actttacattcaactcacatttagccaaaatcaattttacaaaatcaattcattcaaaatcaatt 30958209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 583 - 647
Target Start/End: Original strand, 30973957 - 30974021
Alignment:
Q  583 actttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||||| ||||| |||  |||||| | |||||||||||||||||||||||| | ||||||||||    
T  30973957 actttacattcaactcacatttagccaaaatcaattttacaaaatcaattcattcaaaatcaatt 30974021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 297 - 376
Target Start/End: Complemental strand, 42799960 - 42799880
Alignment:
Q  297 tgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaa-ctcaaatgagtcaatccaaacaggccc 376  Q
    ||||||||| ||||||||||| |||| |  |||||| | ||||| |||||||| ||||||| || ||||||||||||||||    
T  42799960 tgttttcataagttctcccaaagagtttcacaaaacatatgtcagtagataaagctcaaataagccaatccaaacaggccc 42799880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 42800109 - 42800057
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagc 161  Q
    |||||| |||||||||||||||| |||||| ||||| |||||||||| |||||    
T  42800109 ttggattaacagcttatttgtagcttatagcagaagcgcttatcatgttaagc 42800057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 585 - 649
Target Start/End: Original strand, 42913164 - 42913228
Alignment:
Q  585 tttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||| || |||||| |||||| |||||| ||||||| | |||||||||||| ||||||||||||    
T  42913164 tttacatttaattcacttttagttagaattaattttatacaatcaattcactcaaaatcaatttt 42913228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 617 - 649
Target Start/End: Complemental strand, 49356336 - 49356304
Alignment:
Q  617 ttttacaaaatcaattcactaaaaatcaatttt 649  Q
    |||||||||||||||||||||||||||||||||    
T  49356336 ttttacaaaatcaattcactaaaaatcaatttt 49356304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 1508777 - 1508722
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgct 164  Q
    ||||| |||||||||||||| |  |||||| | |||||||||||||||||||||||    
T  1508777 ttggaaaaacagcttatttgcaacttatagcacaagtgcttatcatgataagcgct 1508722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 535
Target Start/End: Complemental strand, 3845276 - 3845148
Alignment:
Q  405 ccaaaattgattctatagcggtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctaga 504  Q
    ||||||||||||||| ||  |||||||||| | | ||| ||||| ||| | || | | ||||||||| ||||| ||||||| ||   | ||||| |||||    
T  3845276 ccaaaattgattctagaggtgtagaattgattttgacatgtttgtttgatctcaagtagaattgattctgcctctagaatttata--acttgaaactaga 3845179  T
Q  505 aattagagcttttgattctataattgatttt 535  Q
    || | ||||||||||||||| ||||||||||    
T  3845178 aactggagcttttgattctagaattgatttt 3845148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 535
Target Start/End: Original strand, 5406886 - 5406957
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    |||||||||||||| |||||| ||||||| | ||||||||||||   ||||| ||||| || ||||||||||    
T  5406886 aattgattttgcctctagaatggattctactcgaagctagaaatggtagcttctgattatagaattgatttt 5406957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 16073004 - 16072953
Alignment:
Q  327 caaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    |||||||| ||||| ||||||| ||||||| |||||||||||||||| ||||    
T  16073004 caaaacttatgtcattagataagctcaaataagtcaatccaaacaggtccta 16072953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 648
Target Start/End: Original strand, 25620179 - 25620254
Alignment:
Q  573 aacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaattt 648  Q
    ||||||| ||||||||| |||| || || ||||  || |||||||||||||||||||||| ||| ||||| |||||    
T  25620179 aacataaatcactttactttcatttaatatttaattataatcaattttacaaaatcaatttactcaaaattaattt 25620254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 31365467 - 31365416
Alignment:
Q  110 tggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagc 161  Q
    ||||||||||||||||||| || |||||| | ||||| ||||||||||||||    
T  31365467 tggataaacagcttatttgcagcttatagcacaagtgattatcatgataagc 31365416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 34632206 - 34632131
Alignment:
Q  147 cttatcatgataagcgctcatacattagctatttttatagaaaaagataaaa-caaagttaaattgttttcgcata 221  Q
    ||||||||||||| |||| ||| || ||| |||| |||||||||||||||||  ||||| ||||||||||| ||||    
T  34632206 cttatcatgataatcgcttatatataagcaatttctatagaaaaagataaaattaaagtcaaattgttttcacata 34632131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 376
Target Start/End: Complemental strand, 42545407 - 42545312
Alignment:
Q  281 gaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggccc 376  Q
    |||||||  ||||||||||||||||||||||||||||  |||||  |||||||  ||||| ||||| |  |||||| || ||||| || |||||||    
T  42545407 gaaaattatcataagctgttttcatgagttctcccaaatagtctaacaaaactaatgtcactagatgagttcaaataagccaatctaagcaggccc 42545312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 535
Target Start/End: Original strand, 52364047 - 52364102
Alignment:
Q  480 agaattgattctagttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    ||||||| ||||| |||||||||  | ||| |||||||||||||||||||||||||    
T  52364047 agaattgtttctacttgaagctatgatttatagcttttgattctataattgatttt 52364102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 23187865 - 23187915
Alignment:
Q  504 aaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    ||||| |||||||| |||||| |||||| ||| ||||||||||||||||||    
T  23187865 aaattggagcttttaattctagaattgaattttacactcaaatttgttgtt 23187915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 572 - 630
Target Start/End: Original strand, 24916581 - 24916639
Alignment:
Q  572 aaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaa 630  Q
    |||||||| ||| ||||| ||||| ||| |||||||  |||||||||||||||||||||    
T  24916581 aaacataaatcattttacattcaactcacttttagcctgaatcaattttacaaaatcaa 24916639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 648
Target Start/End: Complemental strand, 25129545 - 25129451
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaattt 648  Q
    ||||| ||||||  || ||||||||| |||| |||| ||||| ||| ||||| |  ||||||||||||||| ||||||||| | || ||||||||    
T  25129545 ttttacataaatacatccaaacataaatcacgttacattcaactcacttttatcctgaatcaattttacaacatcaattcattcaagatcaattt 25129451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 477 - 547
Target Start/End: Complemental strand, 27499453 - 27499383
Alignment:
Q  477 tttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatt 547  Q
    |||| |||||| ||| ||||||| ||||||||  ||||||| |||||| |||||||||||| ||| |||||    
T  27499453 tttaaaattgactcttgttgaagttagaaattgaagcttttaattctaaaattgattttaatacttaaatt 27499383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 644
Target Start/End: Complemental strand, 41591359 - 41591269
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatca 644  Q
    ||||| || ||||||| ||||||||| ||||||||  ||||| ||||||||||| |||| | ||||||   |||||||||| | |||||||    
T  41591359 ttttacatgaatgtatccaaacataaatcactttaaattcaactcatttttagcaagaacctattttattgaatcaattcatttaaaatca 41591269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 562 - 632
Target Start/End: Complemental strand, 48089688 - 48089618
Alignment:
Q  562 aaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaatt 632  Q
    |||||||| ||| ||||| ||| ||||| ||||| ||| ||||| ||||||||||||||| | ||||||||    
T  48089688 aaatgtatccaatcataaatcattttacattcaactcacttttaactagaatcaattttaaagaatcaatt 48089618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 13715629 - 13715560
Alignment:
Q  233 tataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgtttt 302  Q
    ||||||| | ||||||  ||||||||||||||| |||||||||||   |||| ||| |||||||||||||    
T  13715629 tataagcgatattggacaacttatgaaaataagttgaaaaatgcttatgaaagttgtcataagctgtttt 13715560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 328 - 369
Target Start/End: Original strand, 26911699 - 26911740
Alignment:
Q  328 aaaacttgtgtcaatagataaactcaaatgagtcaatccaaa 369  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||    
T  26911699 aaaacttatgtcagtagataaactcaaataagtcaatccaaa 26911740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 327 - 368
Target Start/End: Complemental strand, 33405155 - 33405114
Alignment:
Q  327 caaaacttgtgtcaatagataaactcaaatgagtcaatccaa 368  Q
    |||||||| ||||| ||||||||||||||| |||||||||||    
T  33405155 caaaacttatgtcagtagataaactcaaataagtcaatccaa 33405114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 290 - 371
Target Start/End: Complemental strand, 34610806 - 34610725
Alignment:
Q  290 cataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaaca 371  Q
    ||||||| |||||||| |||||||||||  |||  | |||||||| ||||| ||||||| ||||||| |||| || ||||||    
T  34610806 cataagcagttttcataagttctcccaaatagttgtacaaaacttatgtcagtagataagctcaaataagtccatacaaaca 34610725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 37689261 - 37689325
Alignment:
Q  251 acttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctccca 316  Q
    ||||||||||||||| ||||||| |||   |||||||| |||||||||||||| | ||||||||||    
T  37689261 acttatgaaaataagttgaaaaaagcttt-gaaaattgtcataagctgttttcttaagttctccca 37689325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 580 - 649
Target Start/End: Complemental strand, 44958622 - 44958553
Alignment:
Q  580 ttcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    |||||||||| ||||| ||| ||||||| | |||||||||||||  ||||||||||| ||| || |||||    
T  44958622 ttcactttactttcaactcacttttagccaaaatcaattttacatgatcaattcactcaaagtcgatttt 44958553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 46030911 - 46030980
Alignment:
Q  148 ttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagtt-aaattgttttc 216  Q
    |||||||||||| | || ||| || ||||||||  |||||||||||||||| |||||| |||||||||||    
T  46030911 ttatcatgataaacacttatatataagctatttcgatagaaaaagataaaataaagttaaaattgttttc 46030980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 611 - 648
Target Start/End: Original strand, 49158656 - 49158693
Alignment:
Q  611 aatcaattttacaaaatcaattcactaaaaatcaattt 648  Q
    |||||||||||||||||||||||| | |||||||||||    
T  49158656 aatcaattttacaaaatcaattcattcaaaatcaattt 49158693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 464 - 536
Target Start/End: Original strand, 51167846 - 51167919
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttga-ttctataattgatttta 536  Q
    |||||||||||  |||| |||||||||||||| |||||| || ||  ||||||||| ||||| |||||||||||    
T  51167846 aattgattttgtttttataattgattctagtttaagctacaatttgcagcttttgacttctacaattgatttta 51167919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 560 - 649
Target Start/End: Original strand, 53567961 - 53568050
Alignment:
Q  560 ataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||| |||| ||||||||| | ||||| | ||||| ||| |||||   | ||||||||||  |||||||||||||| ||||||||||||    
T  53567961 ataaaggtatccaaacataaattacttttcattcaactcacttttaatcaaaatcaattttgtaaaatcaattcactcaaaatcaatttt 53568050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 2e-27; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 223 - 374
Target Start/End: Original strand, 54426046 - 54426197
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagt 322  Q
    ||||||| ||||||| ||| ||||||| ||||||||||||||  ||||||| |||   |||||||| |||||||||||||| | |||||||||||| |||    
T  54426046 aagttgtttttataatctatattggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctcccaagcagt 54426145  T
Q  323 cttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggc 374  Q
    ||  |||||||| || || ||||||| ||||||| || ||||||||||||||    
T  54426146 ctcacaaaacttatgccagtagataagctcaaataagccaatccaaacaggc 54426197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 223 - 375
Target Start/End: Complemental strand, 17822932 - 17822780
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagt 322  Q
    ||||||| || ||||||||  |||||| ||||||||||||||||| ||||| |||   ||||| || ||||||||||||||||  ||||||| ||  |||    
T  17822932 aagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttctcctaaatagt 17822833  T
Q  323 cttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcc 375  Q
    ||  || ||||| ||||| ||||||| ||||||| ||| ||||||||||||||    
T  17822832 ctcacagaacttatgtcagtagataagctcaaataagttaatccaaacaggcc 17822780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 109 - 313
Target Start/End: Complemental strand, 50662918 - 50662715
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    ||||||||||| |||||||| || |||||  | ||| |||||||||||| |||| | ||  || |||||||||||||| | ||||||||| || ||||||    
T  50662918 ttggataaacaacttatttgcagcttatatcacaagagcttatcatgatgagcgtttatgtataagctatttttatagcataagataaaataatgttaaa 50662819  T
Q  209 ttgttttcgcatacaagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgag 308  Q
    |||| |  || || ||||||| | ||||||||| ||||||| | || |||||||||| ||||||| |||   |||||||| ||| | |||||||||| ||    
T  50662818 ttgtatatgc-tataagttgtttatataagctatattggagaaattgtgaaaataagttgaaaaaagcttatgaaaattgtcattaactgttttcataag 50662720  T
Q  309 ttctc 313  Q
    |||||    
T  50662719 ttctc 50662715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 223 - 376
Target Start/End: Complemental strand, 21731723 - 21731570
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagt 322  Q
    ||||||| ||||||||||| ||||||| | |||||||| |||| ||||||| | |   ||||||||  ||||||||||||||| |||||||||||  | |    
T  21731723 aagttgtttttataagctatattggagaatttatgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttcataagttctcccaaacaat 21731624  T
Q  323 cttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggccc 376  Q
    ||  |||||||| ||||| ||||||  ||||||| |  ||||||||||||||||    
T  21731623 ctcacaaaacttatgtcagtagatatgctcaaataaaccaatccaaacaggccc 21731570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 494 - 554
Target Start/End: Original strand, 33843987 - 33844047
Alignment:
Q  494 ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||    
T  33843987 ttgaagctagaaattggagcttttgattctaaaattgattttaacactcaaatttattgtt 33844047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 445 - 548
Target Start/End: Complemental strand, 32818494 - 32818391
Alignment:
Q  445 tttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaa 544  Q
    ||||||| ||||| | | |||||||||||||||  ||||||||||||| |||||||||||| ||  |||||||||||||| ||||||||||  ||| |||    
T  32818494 tttggtttctttcgagtagaattgattttgcctccagaattgattctatttgaagctagaatttgtagcttttgattctagaattgatttttgcacacaa 32818395  T
Q  545 attt 548  Q
    ||||    
T  32818394 attt 32818391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 464 - 634
Target Start/End: Complemental strand, 55927875 - 55927696
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgt---------t 554  Q
    ||||||||||||||| ||||||||||| | |||| |||| |||||  ||||| |||||||| |||||||  | |||||||||||| ||||         |    
T  55927875 aattgattttgccttcagaattgattccacttgaggctaaaaattgtagcttctgattctagaattgatcgtcacactcaaatttattgttcaagtcact 55927776  T
Q  555 tttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattca 634  Q
    |||| || ||||||| ||||||||| |||| ||| || ||| ||| ||||| || ||||||||||||| |||||||||||    
T  55927775 tttacatgaatgtatccaaacataaatcacattaactccaactcaattttaactggaatcaattttacgaaatcaattca 55927696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 231 - 375
Target Start/End: Complemental strand, 26923 - 26780
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaa 330  Q
    ||||||||||| ||||||| |||||||||||||| |||||||| ||| | |||| ||| |||||||||||||||| | |||||  ||  |||||  ||||    
T  26923 tttataagctatattggagaacttatgaaaataatctgaaaaa-gcttgtgaaatttgtcataagctgttttcataatttctcggaaacagtctaacaaa 26825  T
Q  331 acttgtgtcaatagataaactcaaatgagtcaatccaaacaggcc 375  Q
     ||| || || | ||||| ||||||| || |||||||||||||||    
T  26824 gcttatgccagttgataagctcaaataagccaatccaaacaggcc 26780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 244 - 376
Target Start/End: Complemental strand, 25904269 - 25904137
Alignment:
Q  244 ttggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaata 343  Q
    |||||| |||||| |||||||||||||||| |||   ||||| || |||||||||||||||| || ||||||||  |||||  ||||| || ||||| |     
T  25904269 ttggagaacttataaaaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctcccaaacagtctcacaaaatttatgtcattg 25904170  T
Q  344 gataaactcaaatgagtcaatccaaacaggccc 376  Q
    ||||| ||||||| |||||| | ||||||||||    
T  25904169 gataagctcaaataagtcaaccaaaacaggccc 25904137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 231 - 363
Target Start/End: Original strand, 29657395 - 29657527
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaa 330  Q
    |||| |||||| ||| ||| | |||||||| |||||| |||||||||   |||||||| |||||||||||||||| ||||||| |||| | |||  ||||    
T  29657395 tttacaagctatattagagaagttatgaaattaagctcaaaaatgcttttgaaaattgtcataagctgttttcataagttctctcaagcaatctcacaaa 29657494  T
Q  331 acttgtgtcaatagataaactcaaatgagtcaa 363  Q
    ||||||||   ||||||| ||||||| ||||||    
T  29657495 acttgtgttggtagataagctcaaataagtcaa 29657527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 223 - 375
Target Start/End: Complemental strand, 53294181 - 53294029
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagt 322  Q
    ||||||| ||||||| ||| ||| ||| ||||||||||| ||||||||||  |||   |||||    |||||  |||||||||||||| ||||||  |||    
T  53294181 aagttgtttttataaactatattagagaacttatgaaaacaagctgaaaatagcttttgaaaaccatcataatttgttttcatgagttttcccaaacagt 53294082  T
Q  323 cttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcc 375  Q
    ||| |||||||  ||||| ||||||| | ||||| ||||||||||||||||||    
T  53294081 cttacaaaactcatgtcagtagataagcacaaattagtcaatccaaacaggcc 53294029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 405 - 548
Target Start/End: Original strand, 2635084 - 2635227
Alignment:
Q  405 ccaaaattgattctatagcggtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctaga 504  Q
    ||||||||||||||| |   ||| |||||| | | ||| ||||| |||||||  | | ||| |||||||||||  |||||||||| |  |||||||||||    
T  2635084 ccaaaattgattctagaagtgtaaaattgattttgacatgtttgattgcttttaagtagaactgattttgcctccagaattgattatgcttgaagctaga 2635183  T
Q  505 aattagagcttttgattctataattgattttaacactcaaattt 548  Q
     ||| |||||||||| |||| |||||||||||| ||||||||||    
T  2635184 gattggagcttttgagtctagaattgattttaagactcaaattt 2635227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 554 - 649
Target Start/End: Original strand, 43868215 - 43868310
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||| |||||||||| |||| | || ||||||||| ||||| | | ||||| ||||||| |||||||||||||||||||| | ||||||||||||    
T  43868215 ttttacataaatgtatccaaagacaaatcactttactttcaacttacttttaactagaattaattttacaaaatcaattcattcaaaatcaatttt 43868310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 3155487 - 3155593
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    ||||||||||| ||||| || || |||||||| ||| ||||||||||||||||    ||  || |||||||| ||||| ||||||||||| |||||||||    
T  3155487 ttggataaacaacttatctgcagcttatagtacaagcgcttatcatgataagcatgtatgtataagctatttctatagcaaaagataaaataaagttaaa 3155586  T
Q  209 ttgtttt 215  Q
    |||||||    
T  3155587 ttgtttt 3155593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 463 - 647
Target Start/End: Original strand, 22250205 - 22250398
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgt--------- 553  Q
    ||||||||||||| | ||| |||| ||||| ||||||| |||||||  |||||||||||||  ||||| |||||| |||||||||| ||||             
T  22250205 gaattgattttgcatctaggattggttctacttgaagcaagaaattgaagcttttgattctgaaattgcttttaatactcaaatttattgttcgattcac 22250304  T
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||| || ||||||| ||||  ||| |||||| || ||||| ||  ||||||  | ||||||||||||| ||||||||| || ||||||||||    
T  22250305 ttttacatgaatgtatccaaatgtaaatcacttcacattcaactcgcttttagtcataatcaattttacagaatcaattccctcaaaatcaatt 22250398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 8705017 - 8705093
Alignment:
Q  296 ctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacag 372  Q
    ||||||| || |||||||||||  |||||  |||||||| ||||||||||||| |||||||||| ||||||||||||    
T  8705017 ctgtttttataagttctcccaatcagtctcacaaaacttatgtcaatagataagctcaaatgagccaatccaaacag 8705093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 494 - 554
Target Start/End: Original strand, 37439155 - 37439215
Alignment:
Q  494 ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||||||||||||||| ||||||| ||||||||||||||||| |||||||| ||| |||||    
T  37439155 ttgaagctagaaattatagcttttaattctataattgatttttacactcaattttattgtt 37439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 371
Target Start/End: Complemental strand, 39603237 - 39603090
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagt 322  Q
    ||||||| |||||||| || ||||||| ||||||||||||||  | ||||| |||    ||||||| |||||||||||||| | |||||||||||  |||    
T  39603237 aagttgtttttataaggtatattggagaacttatgaaaataacttaaaaaaagcttataaaaattgtcataagctgttttcctaagttctcccaaacagt 39603138  T
Q  323 cttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaaca 371  Q
    ||  |||||||| |  ||||||| || ||||||| || |||||||||||    
T  39603137 ctcacaaaacttataccaataga-aagctcaaataagccaatccaaaca 39603090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 425 - 548
Target Start/End: Original strand, 35065004 - 35065127
Alignment:
Q  425 gtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattcta 524  Q
    |||||||||| ||| |||  ||||||||||||| | | |||||||||||||||  | |||||||| || |||||||||| | ||    ||||||||||||    
T  35065004 gtagaattgattatgacatttttggttgctttcgagtagaattgattttgcctcaataattgattttacttgaagctagtatttgtgacttttgattcta 35065103  T
Q  525 taattgattttaacactcaaattt 548  Q
     |||||||||| |||| |||||||    
T  35065104 gaattgatttttacacacaaattt 35065127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 204
Target Start/End: Complemental strand, 27079 - 26982
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctc--atacattagctatttttatagaaaaagataaaacaaagt 204  Q
    ||||||||||| ||| |||| || |||||| | ||| |||||||||||||||||| |  |||||| ||| |||||||| ||||||||||||| |||||    
T  27079 ttggataaacatcttgtttgcagcttatagcacaagcgcttatcatgataagcgcgcatatacataagccatttttatggaaaaagataaaataaagt 26982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 2206450 - 2206364
Alignment:
Q  463 gaattgattttgcctttagaattgattctag-ttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    ||||||||||| |||  | |||||||||||| ||||||||| ||||| |||||||||||||||  |||||||||  |||||||||||    
T  2206450 gaattgatttttcctccaaaattgattctagcttgaagctaaaaattggagcttttgattctaggattgatttttgcactcaaattt 2206364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 22030234 - 22030352
Alignment:
Q  251 acttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaac 350  Q
    |||||||||||||| |||| ||| |||   |||||||| |||||||||||||||| |||||||||||  || ||  |||||||| ||  |||||| || |    
T  22030234 acttatgaaaataacctgagaaaagcttttgaaaattgtcataagctgttttcataagttctcccaaataggctcacaaaacttatgctaatagacaagc 22030333  T
Q  351 tcaaatgagtcaatccaaa 369  Q
    |||||| ||||||| ||||    
T  22030334 tcaaataagtcaatacaaa 22030352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 565 - 647
Target Start/End: Complemental strand, 38740369 - 38740287
Alignment:
Q  565 tgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||| ||||||||| |||||| | |||||| ||| ||||| | | |||||||||||||||||||||||| | ||||||||||    
T  38740369 tgtatccaaacataaatcacttcaacttcaactcacttttatccaaaatcaattttacaaaatcaattcattcaaaatcaatt 38740287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 44863148 - 44863042
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    ||||||||||| |||||||| || |||||| | |||  ||| |||||||||| ||| || ||| |||||||||||||||||||| ||| | ||  |||||    
T  44863148 ttggataaacaacttatttgcagcttatagcacaagcacttgtcatgataagtgcttatgcataagctatttttatagaaaaaggtaagataacattaaa 44863049  T
Q  209 ttgtttt 215  Q
    |||||||    
T  44863048 ttgtttt 44863042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 334
Target Start/End: Complemental strand, 50681211 - 50681045
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgttttcgcatac-----aagttgtgtttataagctagattggagtacttatgaaaataagct 267  Q
    |||||||||||||| | ||||||||| || ||||||||||||| | |||      ||||||| | ||||||||| ||||||| | ||||||||||||  |    
T  50681211 agctatttttataggataagataaaataatgttaaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataaatt 50681112  T
Q  268 gaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaactt 334  Q
    |||||| |||   |||||||| ||| | |||||||||| ||||||| |||  |||||  ||||||||    
T  50681111 gaaaaaagcttatgaaaattgtcattaactgttttcataagttctctcaaacagtctcacaaaactt 50681045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 8330126 - 8330167
Alignment:
Q  494 ttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  8330126 ttgaagctagaaattggagcttttgattctataattgatttt 8330167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 548
Target Start/End: Original strand, 30357492 - 30357576
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    ||||||||||  ||||||||||||||||| ||||||||   | ||  ||||||||||| ||||||||||||| |||| |||||||    
T  30357492 aattgattttatctttagaattgattctacttgaagctgtgatttgtagcttttgattatataattgatttttacacacaaattt 30357576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 233 - 372
Target Start/End: Original strand, 2244064 - 2244203
Alignment:
Q  233 tataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaac 332  Q
    ||||||||| ||||||| ||||||||||||||| ||||||| | |   ||| |||| ||||||||||||| |  | |||||||||  ||| |   |||||    
T  2244064 tataagctatattggagaacttatgaaaataaggtgaaaaaagtttatgaatattgtcataagctgtttttaaaaattctcccaaacagtttcaaaaaac 2244163  T
Q  333 ttgtgtcaatagataaactcaaatgagtcaatccaaacag 372  Q
    || ||||| |||||||||||  || | |||||||||||||    
T  2244164 ttatgtcagtagataaactcggataaatcaatccaaacag 2244203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 503 - 554
Target Start/End: Original strand, 4243406 - 4243457
Alignment:
Q  503 gaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||||| ||||||||||||||| |||||||||| |||||||||||| |||||    
T  4243406 gaaattggagcttttgattctagaattgatttttacactcaaatttattgtt 4243457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 7839425 - 7839346
Alignment:
Q  226 ttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcat 305  Q
    |||| |||||||||||||||| || ||||| ||||||||| ||||||| |||   |||||||| |||||| |||||||||    
T  7839425 ttgtttttataagctagattgaagaacttacgaaaataagttgaaaaaagcttatgaaaattgtcataagttgttttcat 7839346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 464 - 554
Target Start/End: Original strand, 18597019 - 18597110
Alignment:
Q  464 aattgattttgcctttagaattgattctag-ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||||||||| |||  |||||||||||||  ||||||||| || ||  | ||||||||||||||||||||||||||| ||||| || |||||    
T  18597019 aattgattttacctccagaattgattctaacttgaagctataatttgaaccttttgattctataattgattttaacattcaaagttattgtt 18597110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 467 - 557
Target Start/End: Original strand, 33843661 - 33843756
Alignment:
Q  467 tgattttgcctttagaattgattctagttgaagcta-----gaaattagagcttttgattctataattgattttaacactcaaatttgttgttttt 557  Q
    |||||||||||  | ||||||||||| ||||||||      |||||| |||||||| || ||| ||||||||||||||||||||||| ||||||||    
T  33843661 tgattttgcctccaaaattgattctacttgaagctgattctgaaattggagctttttatcctaaaattgattttaacactcaaatttattgttttt 33843756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 223 - 373
Target Start/End: Complemental strand, 40831096 - 40830947
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttt-tcatgagttctcccaaggag 321  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||    ||| ||| | |||||||||| |||| | |||| || |  ||    
T  40831096 aagttgtttttataagctagattggagaacttatg-aaataagttgaaaaaagcttataaaagttgtcgtaagctgtttctcataatttcttccgaacag 40830998  T
Q  322 tcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacagg 373  Q
    |||  |||||||| || |||||||||| ||||||| || |||||||||||||    
T  40830997 tctcacaaaacttatg-caatagataagctcaaattagccaatccaaacagg 40830947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 11389410 - 11389516
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    ||||||||||| |||||||| ||||||||  |  |||||||||||||||||| ||| ||  || |  ||||| |||| |||||||||||  |||||||||    
T  11389410 ttggataaacaacttatttgcagtttatatcatgagtgcttatcatgataagtgcttatgtataaattatttctataaaaaaagataaagtaaagttaaa 11389509  T
Q  209 ttgtttt 215  Q
     ||||||    
T  11389510 ctgtttt 11389516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 563 - 649
Target Start/End: Complemental strand, 20911896 - 20911810
Alignment:
Q  563 aatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||||| ||||||||| | | ||| ||||||| |||  ||| || | ||||||||||||| |||||||||||| ||||||||||||    
T  20911896 aatgtattcaaacataaattattttgccttcaactcaacttttgccataatcaattttacataatcaattcactcaaaatcaatttt 20911810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 483 - 548
Target Start/End: Original strand, 1048716 - 1048781
Alignment:
Q  483 attgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    |||||||||| || ||| ||||| ||| ||||||| ||||||||||||||| | ||||||||||||    
T  1048716 attgattctacttaaagttagaatttatagcttttaattctataattgattcttacactcaaattt 1048781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 9760391 - 9760484
Alignment:
Q  176 tatttttatagaaaaagataaaacaaagttaaattgttttcgcatac-----aagttgtgtttataagctagattggagtacttatgaaaataa 264  Q
    ||||||||| ||||||||||||| ||||||||||| ||||   |||      ||||||| ||||||||||| ||||||| ||||||||||||||    
T  9760391 tatttttattgaaaaagataaaataaagttaaattcttttttaatatgctataagttgtttttataagctatattggagaacttatgaaaataa 9760484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 494 - 555
Target Start/End: Original strand, 10185204 - 10185265
Alignment:
Q  494 ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgttt 555  Q
    |||||| ||||||||  |||||||||||||| ||||||| || |||||||||||| ||||||    
T  10185204 ttgaaggtagaaattgaagcttttgattctaaaattgatctttacactcaaatttattgttt 10185265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 372
Target Start/End: Complemental strand, 13126615 - 13126494
Alignment:
Q  251 acttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaac 350  Q
    ||||||||||||||||||||||| |||   || || || ||||||||||||| || |||||| ||||  |||||  |||||||| ||| | ||| ||| |    
T  13126615 acttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttcttccaaacagtctcacaaaacttatgttagtaggtaagc 13126516  T
Q  351 tcaaatgagtcaatccaaacag 372  Q
    | |||| || ||||||||||||    
T  13126515 taaaataagccaatccaaacag 13126494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 370
Target Start/End: Complemental strand, 15173312 - 15173223
Alignment:
Q  281 gaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaac 370  Q
    |||||||| |||||||| ||||||| |  ||||||||  |||||  |||||||| ||||| |||||||  |||||| |||||||||||||    
T  15173312 gaaaattgtcataagctattttcataaagtctcccaaacagtctcacaaaacttatgtcagtagataagttcaaataagtcaatccaaac 15173223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 277
Target Start/End: Original strand, 44138443 - 44138616
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    |||||||||||||||||||| || || ||||| |||  ||||||||||||   ||| ||  || |||| ||| ||||| | ||||||||| |||||||||    
T  44138443 ttggataaacagcttatttgcagcttttagtacaagcacttatcatgatacttgcttatgtataagctgtttctatagcagaagataaaataaagttaaa 44138542  T
Q  209 ttgttttcgcata-----caagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgct 277  Q
    ||| ||||| |||      || |||| || |||| | |  |||||| |||||||||||||||||||||| ||||    
T  44138543 ttgctttcgtatagcctgtaatttgttttcataaaccatgttggagaacttatgaaaataagctgaaaattgct 44138616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 585 - 649
Target Start/End: Complemental strand, 24364167 - 24364103
Alignment:
Q  585 tttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||| ||||| ||| ||||||  ||||||||||||||| |||||||||| | ||||||||||||    
T  24364167 tttacattcaaatcacttttagtgagaatcaattttacataatcaattcattcaaaatcaatttt 24364103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 25571369 - 25571417
Alignment:
Q  330 aacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    ||||| ||||| ||||||||||||||| || ||||||||||||||||||    
T  25571369 aacttatgtcagtagataaactcaaataagccaatccaaacaggcccta 25571417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 281 - 377
Target Start/End: Complemental strand, 42404031 - 42403936
Alignment:
Q  281 gaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggccct 377  Q
    |||||||| |||||||||||||||  | |||||||||  || |   |||||||| ||||| | ||||| ||||||| ||||||||||||||||||||    
T  42404031 gaaaattgtcataagctgttttcagaaattctcccaaatag-cacacaaaacttatgtcagttgataagctcaaataagtcaatccaaacaggccct 42403936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 404 - 554
Target Start/End: Original strand, 45329766 - 45329918
Alignment:
Q  404 gccaaaattgattctatagcggtagaattgagtataacaagtttggttgctttccactt-gaattgattttgcctttagaattgattctagtt-gaagct 501  Q
    ||||||||||||| || ||  ||| |||||| | ||||| ||||||||||| || | || ||||| |||||||||  | ||||||||||  || ||| ||    
T  45329766 gccaaaattgattatagaggtgtaaaattgactttaacatgtttggttgctctctaattagaatttattttgcctccataattgattcttctttgaatct 45329865  T
Q  502 agaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    | |||||  | |||||||||||| ||||||| || |||||||||||| |||||    
T  45329866 ataaattgaatcttttgattctaaaattgatatttacactcaaattttttgtt 45329918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 585 - 649
Target Start/End: Original strand, 48575494 - 48575558
Alignment:
Q  585 tttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||| ||||| ||||||||| | | |||||||||||||||||||||||| | ||||| ||||||    
T  48575494 tttacattcaactcatttttatcaaaaatcaattttacaaaatcaattcattcaaaattaatttt 48575558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 574 - 649
Target Start/End: Original strand, 5835778 - 5835853
Alignment:
Q  574 acataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    |||||| ||||||| | ||||||||| |||||   | |||||||| ||||||||||||||| | ||||||||||||    
T  5835778 acataaatcacttttcattcaattcagttttaatcaaaatcaattctacaaaatcaattcaatcaaaatcaatttt 5835853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 535
Target Start/End: Original strand, 16643958 - 16644029
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    |||||||||||| ||||  ||| |||||| ||||||||| || ||| || ||||||||||| ||||||||||    
T  16643958 aattgattttgcgtttatgatttattctacttgaagctataatttatagattttgattctagaattgatttt 16644029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 632
Target Start/End: Complemental strand, 17898127 - 17898057
Alignment:
Q  561 taaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaatt 632  Q
    ||||| ||| ||||||||| ||||||||| ||||| ||| ||| ||| |||||||||| |||||||||||||    
T  17898127 taaatatatccaaacataaatcactttacattcaactcactttcagc-agaatcaattatacaaaatcaatt 17898057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 497 - 544
Target Start/End: Original strand, 20712664 - 20712710
Alignment:
Q  497 aagctagaaattagagcttttgattctataattgattttaacactcaa 544  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||||||    
T  20712664 aagctagaaattggagctttt-attctataattgatttttacactcaa 20712710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 25885804 - 25885851
Alignment:
Q  170 attagctatttttatagaaaaagataaaacaaagttaaattgttttcg 217  Q
    ||||||| ||| ||||| ||||||||||| ||||||||||||||||||    
T  25885804 attagctctttctatagcaaaagataaaataaagttaaattgttttcg 25885851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 373
Target Start/End: Original strand, 29774302 - 29774393
Alignment:
Q  282 aaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacagg 373  Q
    |||| ||||||||||| ||||||| |||||||| ||  |||||  |||||||   |||| || |||||||||||| ||||| ||||||||||    
T  29774302 aaaaatgacataagctattttcataagttctcctaaacagtctcacaaaactctagtcagtaaataaactcaaataagtcattccaaacagg 29774393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 535
Target Start/End: Original strand, 51093238 - 51093309
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    |||| ||||||||| || |||||||||||  ||||||||||| || |||||||||  |||| ||||||||||    
T  51093238 aatttattttgcctctataattgattctaactgaagctagaatttggagcttttgcctctacaattgatttt 51093309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 55302263 - 55302330
Alignment:
Q  234 ataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttt 301  Q
    ||||||||  |||||  ||||||||||||||||||||||| |||   |||||||| ||||||||||||    
T  55302263 ataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgttt 55302330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 571 - 629
Target Start/End: Complemental strand, 1023907 - 1023849
Alignment:
Q  571 caaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatca 629  Q
    |||||| || ||||||||||||||| ||| ||||||||| ||||| ||||||| |||||    
T  1023907 caaacaaaaatcactttaccttcaactcacttttagctaaaatcatttttacagaatca 1023849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 498 - 548
Target Start/End: Original strand, 2206850 - 2206900
Alignment:
Q  498 agctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    ||||| ||||| |||||||||||| || |||||| ||||||||||||||||    
T  2206850 agctaaaaattggagcttttgattttagaattgactttaacactcaaattt 2206900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 482 - 544
Target Start/End: Original strand, 9064229 - 9064291
Alignment:
Q  482 aattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaa 544  Q
    ||||||||||| ||||| |||||| ||  || ||||||||||| |||||||||| ||||||||    
T  9064229 aattgattctacttgaaactagaatttgtagtttttgattctagaattgattttcacactcaa 9064291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 342 - 376
Target Start/End: Complemental strand, 22662199 - 22662165
Alignment:
Q  342 tagataaactcaaatgagtcaatccaaacaggccc 376  Q
    ||||||||||||||| |||||||||||||||||||    
T  22662199 tagataaactcaaataagtcaatccaaacaggccc 22662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 342 - 376
Target Start/End: Complemental strand, 22666678 - 22666644
Alignment:
Q  342 tagataaactcaaatgagtcaatccaaacaggccc 376  Q
    ||||||||||||||| |||||||||||||||||||    
T  22666678 tagataaactcaaataagtcaatccaaacaggccc 22666644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 327 - 377
Target Start/End: Complemental strand, 27043793 - 27043743
Alignment:
Q  327 caaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggccct 377  Q
    |||||||| ||||| ||||||| ||||||| ||||||||||||||| ||||    
T  27043793 caaaacttatgtcagtagataagctcaaataagtcaatccaaacagaccct 27043743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 29779160 - 29779118
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaa 505  Q
    ||||||||||||| | |||||||||||||| ||||||||||||    
T  29779160 gaattgattttgcttgtagaattgattctacttgaagctagaa 29779118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 567 - 641
Target Start/End: Complemental strand, 35122375 - 35122301
Alignment:
Q  567 tatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaa 641  Q
    |||| |||||||| | ||| ||||||||| ||| |||||||||||| |||||||||  ||| | |||||||||||    
T  35122375 tatataaacataaataactataccttcaactcaattttagctagaaccaattttacttaattagttcactaaaaa 35122301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 43505904 - 43505946
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    |||||||||||||| ||||||||||| || |||||||||||||    
T  43505904 agctatttttatagcaaaagataaaataacgttaaattgtttt 43505946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 44797834 - 44797872
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattg 211  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  44797834 agctatttttatagcaaaagataaaacaacgttaaattg 44797872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 51630059 - 51630101
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||    
T  51630059 agctatttatatagcaaaagataaaataaagttaaattgtttt 51630101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 463 - 545
Target Start/End: Complemental strand, 55639826 - 55639744
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaa 545  Q
    |||||||||||| ||||| |||||||| || || | | ||||||||  || |||| |||||| ||||| ||||||||||||||    
T  55639826 gaattgattttgtctttataattgattttacttaaggttagaaattgaagatttttattctagaattggttttaacactcaaa 55639744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 482 - 546
Target Start/End: Original strand, 2206515 - 2206580
Alignment:
Q  482 aattgattctag-ttgaagctagaaattagagcttttgattctataattgattttaacactcaaat 546  Q
    |||||||||||  ||||||||| | |||  |||||||||||||||||||| |||| ||||||||||    
T  2206515 aattgattctaacttgaagctaaacattgtagcttttgattctataattgttttttacactcaaat 2206580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 571 - 632
Target Start/End: Original strand, 2206622 - 2206683
Alignment:
Q  571 caaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaatt 632  Q
    |||| |||| |||||| |||||||| ||| |||| |  ||||||||||||||||||||||||    
T  2206622 caaaaataaatcacttcaccttcaactcaattttcgtcagaatcaattttacaaaatcaatt 2206683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 345 - 378
Target Start/End: Original strand, 20109139 - 20109172
Alignment:
Q  345 ataaactcaaatgagtcaatccaaacaggcccta 378  Q
    |||||||||||||||||| |||||||||||||||    
T  20109139 ataaactcaaatgagtcattccaaacaggcccta 20109172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 377
Target Start/End: Original strand, 24169295 - 24169420
Alignment:
Q  252 cttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaact 351  Q
    |||||||||||||| |||||||  ||   ||||| || |||||||| |||| |  ||||||| |||  |||||  |||||||| || || ||||||||||    
T  24169295 cttatgaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttctctcaaatagtctcacaaaacttatgccagtagataaact 24169394  T
Q  352 caaatgagtcaatccaaacaggccct 377  Q
    | ||| || ||||||||||| |||||    
T  24169395 ctaataagccaatccaaacaagccct 24169420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 614 - 651
Target Start/End: Original strand, 25405729 - 25405766
Alignment:
Q  614 caattttacaaaatcaattcactaaaaatcaattttaa 651  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  25405729 caattttacataatcaattcactcaaaatcaattttaa 25405766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 378
Target Start/End: Original strand, 43505940 - 43506093
Alignment:
Q  226 ttgtgtttataagctagattggagtacttatgaaaataagctgaaaaat-gctcgagaaaattgacataagctgttttcatgagttctcccaaggagtct 324  Q
    |||| |||||||||||||||||||  | |||||||||||| |||||||  |||   ||||| |  |||||||| |||||| |||| ||||| |  |||||    
T  43505940 ttgtttttataagctagattggagatcatatgaaaataagttgaaaaaaagcttatgaaaactctcataagctattttcacgagtcctccctaacagtct 43506039  T
Q  325 tgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
      |||||||| ||||  | ||||||||||||| |||| || |||| | ||||||    
T  43506040 cacaaaacttttgtcggtggataaactcaaataagtcgattcaaatatgcccta 43506093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 403 - 524
Target Start/End: Complemental strand, 48045867 - 48045746
Alignment:
Q  403 ggccaaaattgattctatagcggtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagcta 502  Q
    ||||||||||||||||| ||  |||||||||| |   ||| |||||||||||||| | |  || | ||||||||   |||||| |||| | |||||||||    
T  48045867 ggccaaaattgattctagagaagtagaattgattcggacatgtttggttgctttcaagtaaaactaattttgccaccagaatttattcgacttgaagcta 48045768  T
Q  503 gaaattagagcttttgattcta 524  Q
    |||||| ||| |||| ||||||    
T  48045767 gaaattggagttttttattcta 48045746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 572 - 645
Target Start/End: Complemental strand, 50945463 - 50945390
Alignment:
Q  572 aaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaa 645  Q
    |||||||| ||||||||| || || |||  |||| |  |||||||||||| |||||||||||||| ||||||||    
T  50945463 aaacataaatcactttacatttaactcaaatttatccggaatcaattttataaaatcaattcactcaaaatcaa 50945390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 55064859 - 55064932
Alignment:
Q  244 ttggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    |||||| ||||||||||||||| ||||||| |||   ||||| || |||||| ||||||||  |||||||||||    
T  55064859 ttggagaacttatgaaaataagatgaaaaaagctattgaaaaatgtcataagttgttttcaaaagttctcccaa 55064932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 4e-25; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 425 - 647
Target Start/End: Original strand, 32927833 - 32928064
Alignment:
Q  425 gtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattcta 524  Q
    |||||||||| | | ||| |||||||||||||||| | |||||||||||||||  | | ||||||||| |||||||||| | ||  ||||||||||| ||    
T  32927833 gtagaattgactctgacatgtttggttgctttccagtagaattgattttgcctcaatagttgattctacttgaagctaggatttgtagcttttgattata 32927932  T
Q  525 taattgattttaacactcaaatttgttgt---------ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatca 615  Q
     |||| ||||| |||| ||||||| | ||         ||||| || ||||||| |||||| || ||||||| ||||||| ||| ||||||  |||||||    
T  32927933 gaattcatttttacacacaaatttatagttcaactcacttttacatgaatgtatccaaacacaaatcactttgccttcaactcaattttagtaagaatca 32928032  T
Q  616 attttacaaaatcaattcactaaaaatcaatt 647  Q
    |||||||| ||||||||| || ||||||||||    
T  32928033 attttacataatcaattccctcaaaatcaatt 32928064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 167 - 376
Target Start/End: Complemental strand, 35534738 - 35534527
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattgttttcgcat---acaagttgtgtttataagctagattggagtacttatgaaaata 263  Q
    ||||| || ||||||||||||||| ||||||| |||||||||||||||| | ||   | | ||||| || ||||| || ||||||| |||||||||| ||    
T  35534738 tacataagatatttttatagaaaa-gataaaataaagttaaattgtttttgtatgttatatgttgttttcataagttatattggagaacttatgaaagta 35534640  T
Q  264 agctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaa 363  Q
    ||| |||||| ||| |  ||||||| |||||||||||||||  ||||||| |||  |||||  |||||||| ||| | ||||||| ||||||| |||||     
T  35534639 agccgaaaaaagcttgttaaaattgtcataagctgttttcacaagttctctcaaacagtctcacaaaacttatgttagtagataagctcaaataagtcat 35534540  T
Q  364 tccaaacaggccc 376  Q
    || ||||||||||    
T  35534539 tctaaacaggccc 35534527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 234 - 377
Target Start/End: Complemental strand, 30251510 - 30251367
Alignment:
Q  234 ataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaact 333  Q
    ||||||||  |||||  |||||||||||||||||| |||| |||   ||||| ||  ||||||||||||| | |||||||||||  |||||  | |||||    
T  30251510 ataagctatcttggaccacttatgaaaataagctgtaaaaagcttatgaaaaatgcaataagctgttttcgtaagttctcccaaacagtctcacgaaact 30251411  T
Q  334 tgtgtcaatagataaactcaaatgagtcaatccaaacaggccct 377  Q
    | ||||| ||||||| ||||||| || |||||||||||||||||    
T  30251410 tatgtcagtagataagctcaaataagccaatccaaacaggccct 30251367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 438 - 634
Target Start/End: Complemental strand, 26100278 - 26100072
Alignment:
Q  438 taacaagtttggttgctttccacttgaattgattttgc-ctttagaattgattctagttgaagctagaaattagagcttttgattctataattgatttta 536  Q
    ||||| |||||||||||| | | | ||||||| ||||  || |||||||| ||||| |||||||||| | ||  |||||||||||||||||||||||||     
T  26100278 taacatgtttggttgcttccaagtagaattgactttggtctctagaattggttctatttgaagctaggatttgtagcttttgattctataattgattttt 26100179  T
Q  537 acactcaaatttgttgt---------ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaat 627  Q
    |||| ||||||| | ||         ||||| ||||||| || |||||| || |  |||||||||||| || |||||||  ||||||||||||||| |||    
T  26100178 acacacaaatttatggttcaactcacttttacataaatgcatccaaacacaaatagctttaccttcaactcgtttttagtcagaatcaattttacataat 26100079  T
Q  628 caattca 634  Q
    |||||||    
T  26100078 caattca 26100072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 583 - 646
Target Start/End: Complemental strand, 7602105 - 7602042
Alignment:
Q  583 actttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaat 646  Q
    ||||||| |||||||||||||||| | |||||||||||| |||||||||||||| |||||||||    
T  7602105 actttacattcaattcatttttagttcgaatcaattttataaaatcaattcactcaaaatcaat 7602042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 334
Target Start/End: Original strand, 26771276 - 26771379
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaa 330  Q
    |||||||| || ||| ||| ||||||||||||||| ||||||| |||   |||||||| |||||||||||||||| |||||||||||  |||||  ||||    
T  26771276 tttataagatatattagagaacttatgaaaataagttgaaaaaggcttttgaaaattgtcataagctgttttcataagttctcccaaacagtctcacaaa 26771375  T
Q  331 actt 334  Q
    ||||    
T  26771376 actt 26771379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 296 - 378
Target Start/End: Complemental strand, 43717928 - 43717846
Alignment:
Q  296 ctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    |||||||||| |||||||||||  |||||  |||||||| ||||||||||||| ||||||| || ||||||||| ||||||||    
T  43717928 ctgttttcataagttctcccaaatagtctcacaaaacttatgtcaatagataagctcaaataagccaatccaaataggcccta 43717846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 264
Target Start/End: Complemental strand, 30657944 - 30657798
Alignment:
Q  112 gataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattg 211  Q
    |||||||| |||||||||||||||||| | ||    | ||||||||||||||| |||||| | ||||||||||||||||||||   | ||| ||||||||    
T  30657944 gataaacaacttatttgtagtttatagcacaaacattaatcatgataagcgcttatacataaactatttttatagaaaaagat---ataaatttaaattg 30657848  T
Q  212 ttttcgcatacaagttgtgtttataagctagattggagtacttatgaaaataa 264  Q
    | |     || ||| ||| ||||||||||| ||||||| ||||||||||||||    
T  30657847 tat---gttataagatgtttttataagctatattggagaacttatgaaaataa 30657798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 464 - 550
Target Start/End: Original strand, 4554314 - 4554401
Alignment:
Q  464 aattgattttgcctttagaattgattctag-ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgt 550  Q
    ||||||||||| ||  |||||||||||||  ||||||| ||||||| ||||||||||| ||| |||||||||| | ||||||||||||    
T  4554314 aattgattttgtctcaagaattgattctatcttgaagcaagaaatttgagcttttgatactaaaattgatttttatactcaaatttgt 4554401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 231 - 334
Target Start/End: Original strand, 18133667 - 18133770
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaa 330  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||| ||| | ||||||||  |||||||| |||||  || ||||||||  |||||  ||||    
T  18133667 tttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgttataagctgatttcacaagctctcccaaacagtctcacaaa 18133766  T
Q  331 actt 334  Q
    ||||    
T  18133767 actt 18133770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 10368043 - 10368137
Alignment:
Q  553 tttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    |||||| || |||||||  ||||| || ||||||||||||||| ||| |||||   | |||||||||||||||| ||||||||| ||||||||||    
T  10368043 tttttacatgaatgtatctaaacacaaatcactttaccttcaactcacttttactcaaaatcaattttacaaaaacaattcactcaaaatcaatt 10368137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 450 - 548
Target Start/End: Complemental strand, 13418938 - 13418840
Alignment:
Q  450 ttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    |||||||| | | ||||| |||||| ||| | ||||||||||| || |||  ||||||  ||||||||||||| |||||||||||||||| ||||||||    
T  13418938 ttgctttcaagtagaattaattttgtcttcaaaattgattctacttaaagtaagaaatcggagcttttgattccataattgattttaacattcaaattt 13418840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 378
Target Start/End: Complemental strand, 35644103 - 35643900
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgttttcgcatacaagttgtgtttataagctagattggagtacttatgaaaataagctgaaaa 272  Q
    |||||||||| | | ||||||||||  |  ||||||||||||||| |||   ||||| | || || ||| |||||||  |||||||||||||| ||||||    
T  35644103 agctatttttctggcaaaagataaattaccgttaaattgttttcgtatag--gttgtttatacaaactatattggagagcttatgaaaataagttgaaaa 35644006  T
Q  273 atgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacag 372  Q
    | |||   |||||||| ||||| || ||||||| |||| ||||||  |||||  ||||| || || || ||||||| | ||||| || |||||| |||||    
T  35644005 aagcttatgaaaattgtcataaactattttcataagttatcccaaacagtctcacaaaaattatgccagtagataagcccaaataagccaatcccaacag 35643906  T
Q  373 gcccta 378  Q
    ||||||    
T  35643905 gcccta 35643900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 553 - 650
Target Start/End: Original strand, 3206135 - 3206231
Alignment:
Q  553 tttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttta 650  Q
    ||||||||||||||||| |||||| |||||| |||| ||| || | |||||||  || ||||||||||||||||| ||||  || |||||||||||||    
T  3206135 tttttatataaatgtattcaaacaaaattcattttatcttaaact-atttttacgtaaaatcaattttacaaaataaattagcttaaaatcaatttta 3206231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 554 - 635
Target Start/End: Original strand, 28805254 - 28805335
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcac 635  Q
    |||||||| ||||||| ||||||||| ||| ||||| ||||| |||||||||  | |||||| ||||||||||||| |||||    
T  28805254 ttttatattaatgtattcaaacataaatcattttactttcaaatcatttttatttggaatcagttttacaaaatcacttcac 28805335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 597 - 649
Target Start/End: Original strand, 1820460 - 1820512
Alignment:
Q  597 tcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||||||||| ||||||||||| |||||| ||||||||| ||||||||||||    
T  1820460 tcatttttagccagaatcaatttaacaaaaccaattcactcaaaatcaatttt 1820512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 597 - 649
Target Start/End: Original strand, 1854905 - 1854957
Alignment:
Q  597 tcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||||||||| ||||||||||| |||||| ||||||||| ||||||||||||    
T  1854905 tcatttttagccagaatcaatttaacaaaaccaattcactcaaaatcaatttt 1854957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 290 - 378
Target Start/End: Complemental strand, 32840986 - 32840898
Alignment:
Q  290 cataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    |||||| ||||||||| |||||||||||  ||||| ||||||||||||| | ||||||| ||||| | ||||||| |||| || |||||    
T  32840986 cataagttgttttcataagttctcccaaacagtctcgcaaaacttgtgtgagtagataagctcaagtaagtcaattcaaatagacccta 32840898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 554 - 649
Target Start/End: Complemental strand, 9461544 - 9461450
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    |||||||| ||||||| |||||| || ||||||||  | ||||||||||| ||  ||||||||||||| | |||||||| ||| ||||||||||||    
T  9461544 ttttatatgaatgtatccaaacacaaatcactttagttgcaattcatttt-agtcagaatcaattttaaataatcaattaactcaaaatcaatttt 9461450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 377
Target Start/End: Complemental strand, 10758376 - 10758170
Alignment:
Q  175 ctatttttatagaaaaagataaaacaaagttaaattgttttcgcatac-----aagttgtgtttataagctagattggagtacttatgaaaataagctga 269  Q
    |||||| ||||| |||  |||||| |||||||||||||||| | |||      ||||||| ||||||||||| ||| |   ||||||||||| |||||||    
T  10758376 ctatttctatagcaaatcataaaataaagttaaattgtttttgtatatgctataagttgtctttataagctatattagca-acttatgaaaacaagctga 10758278  T
Q  270 aaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaa 369  Q
    |||| |||   |||||||| |||||||||||||||| | ||||  |||  |||||  |||||||| ||| |  ||||||  |||||| ||||||| ||||    
T  10758277 aaaaagcttttgaaaattgtcataagctgttttcataaattctatcaaacagtctcacaaaacttatgttagcagataagttcaaataagtcaattcaaa 10758178  T
Q  370 caggccct 377  Q
    || |||||    
T  10758177 catgccct 10758170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 354
Target Start/End: Complemental strand, 35749684 - 35749506
Alignment:
Q  175 ctatttttatagaaaaagataaaacaaagttaaattgttttcgcatacaagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaat 274  Q
    |||||| ||||| |||||||||||| ||||||| |||||||   ||| ||||||| |  ||||||||  ||  || ||||||||||||| | |||||||     
T  35749684 ctatttctatagcaaaagataaaactaagttaa-ttgtttttttatataagttgtttccataagctatcttaaagaacttatgaaaatatgttgaaaaaa 35749586  T
Q  275 gctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaa 354  Q
    | |   ||||| ||  | ||||||||||||| ||||||| |||  || || ||||||||| ||||||||||||| |||||    
T  35749585 gtttatgaaaaatgctacaagctgttttcataagttctctcaaacagcctcgcaaaacttatgtcaatagataagctcaa 35749506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 591 - 645
Target Start/End: Complemental strand, 4336625 - 4336571
Alignment:
Q  591 ttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaa 645  Q
    |||| |||| ||||||| | |||||||||||||||||||||||||| ||||||||    
T  4336625 ttcagttcacttttagccacaatcaattttacaaaatcaattcactcaaaatcaa 4336571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 560 - 630
Target Start/End: Original strand, 4950568 - 4950638
Alignment:
Q  560 ataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaa 630  Q
    |||||| ||| ||||||||| ||||||||||||||| ||| || |||| | ||||||||||| ||||||||    
T  4950568 ataaatatatccaaacataaatcactttaccttcaactcaattatagcaataatcaattttaaaaaatcaa 4950638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 482 - 548
Target Start/End: Complemental strand, 13384741 - 13384675
Alignment:
Q  482 aattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    ||||||||||| ||||||||| || ||  |||||||||||||| |||||||||| |||| |||||||    
T  13384741 aattgattctatttgaagctaaaatttgtagcttttgattctagaattgattttcacacacaaattt 13384675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 611 - 649
Target Start/End: Complemental strand, 18355798 - 18355760
Alignment:
Q  611 aatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  18355798 aatcaattttacaaaatcaattcactcaaaatcaatttt 18355760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 291 - 376
Target Start/End: Original strand, 38602400 - 38602483
Alignment:
Q  291 ataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggccc 376  Q
    |||||||||||  || |||||||||||  || ||  |||||||| ||||| ||||||| ||||||| |||||||||||||||||||    
T  38602400 ataagctgttt--ataagttctcccaaacagcctcacaaaacttatgtcagtagataagctcaaataagtcaatccaaacaggccc 38602483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 647
Target Start/End: Original strand, 18123305 - 18123398
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||| |||||| ||| | |||| || ||| ||||||||||||||| |||||| |||| || ||||||||  |||||||||||  |||||||||    
T  18123305 ttttacataaatatattccaacacaaatcattttaccttcaattcacttttagttagagtcgattttacatcatcaattcactctaaatcaatt 18123398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 37945600 - 37945693
Alignment:
Q  224 agttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    |||||| ||||||||||| |||| |  |||| |||||||||| | |||||||||   | |||||| |||||||||||||||  |||||||||||    
T  37945600 agttgtttttataagctatattgtacaacttctgaaaataagttaaaaaatgcttatggaaattgtcataagctgttttcagaagttctcccaa 37945693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 565 - 633
Target Start/End: Original strand, 1373081 - 1373149
Alignment:
Q  565 tgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattc 633  Q
    ||||| ||||||||| |||||| | |||||| ||| ||||| | | |||||||||||||||||||||||    
T  1373081 tgtatccaaacataaatcacttcaacttcaactcacttttatccaaaatcaattttacaaaatcaattc 1373149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 508 - 544
Target Start/End: Complemental strand, 3478764 - 3478728
Alignment:
Q  508 tagagcttttgattctataattgattttaacactcaa 544  Q
    ||||||||||||||||| |||||||||||||||||||    
T  3478764 tagagcttttgattctaaaattgattttaacactcaa 3478728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 479 - 535
Target Start/End: Complemental strand, 15677906 - 15677850
Alignment:
Q  479 tagaattgattctagttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    |||||||||||||| |||||||||| | ||| ||||||||||| || ||||||||||    
T  15677906 tagaattgattctacttgaagctaggatttatagcttttgattatagaattgatttt 15677850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 591 - 631
Target Start/End: Original strand, 30706283 - 30706323
Alignment:
Q  591 ttcaattcatttttagctagaatcaattttacaaaatcaat 631  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  30706283 ttcaattcattttcagttagaatcaattttacaaaatcaat 30706323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 553 - 641
Target Start/End: Original strand, 38516328 - 38516416
Alignment:
Q  553 tttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaa 641  Q
    |||||| ||||||  || ||||||||| ||||||||| ||||| ||| | ||| | | |||||||| ||||||||||||||||| ||||    
T  38516328 tttttacataaatacatccaaacataaatcactttacattcaactcactattatcgaaaatcaattctacaaaatcaattcactcaaaa 38516416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 464 - 548
Target Start/End: Original strand, 38868478 - 38868562
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    |||||||  ||||| || ||||||||||| |||||||||  | ||  |||||||| |||||||||||||||| |||| |||||||    
T  38868478 aattgatgatgcctctaaaattgattctacttgaagctaagatttgtagcttttggttctataattgattttcacacacaaattt 38868562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 554
Target Start/End: Complemental strand, 16972170 - 16972079
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||||||||||||||| ||| |||||| || |||||||||||| ||  || |||| ||| || |||||||||| | || ||||||| |||||    
T  16972170 gaattgattttgccttcagagttgattgtatttgaagctagaatttgtagtttttaattttagaattgatttttaaacacaaatttattgtt 16972079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 554
Target Start/End: Original strand, 38203265 - 38203356
Alignment:
Q  464 aattgattttgcctttagaattgattctag-ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||||||||||||| |||| || ||||||  |||||| || ||||||||| || |||||||| |||| ||||||| | | ||||||||||||    
T  38203265 aattgattttgcctctagagtttattctaacttgaagttaaaaattagaggttatgattctagaattaattttaatatttaaatttgttgtt 38203356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 375
Target Start/End: Original strand, 38648355 - 38648506
Alignment:
Q  224 agttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtc 323  Q
    |||||| || ||||||||  ||| || |||||||||| || ||| ||||| |||   || || || ||| |||||||||||| || ||||||||  ||||    
T  38648355 agttgttttcataagctatcttgtagaacttatgaaattacgcttaaaaaagcttatgagaactgtcatgagctgttttcataaggtctcccaaacagtc 38648454  T
Q  324 ttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcc 375  Q
    |  |||||||| ||||| ||||||| || |||| || |||||| ||||||||    
T  38648455 tcacaaaacttatgtcagtagataatcttaaataagccaatcctaacaggcc 38648506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 379
Target Start/End: Complemental strand, 43045783 - 43045636
Alignment:
Q  232 ttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaa 331  Q
    |||||| ||| ||||||| ||||||||||||||| ||||||| |||    |||||||   |||||||||||||| || ||||| ||  |||||  ||||     
T  43045783 ttataaactatattggagaacttatgaaaataagttgaaaaaagcttattaaaattgttgtaagctgttttcataagatctccaaaacagtctcacaaat 43045684  T
Q  332 cttgtgtcaatagataaactcaaatgagtcaatccaaacaggccctag 379  Q
    ||| ||  | ||||||| || |||| || |||||||||||||| ||||    
T  43045683 cttatgctagtagataagcttaaataagccaatccaaacaggctctag 43045636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 601 - 647
Target Start/End: Complemental strand, 26559910 - 26559864
Alignment:
Q  601 ttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    |||||| ||||||||||||||  ||||||||||||| ||||||||||    
T  26559910 ttttagttagaatcaattttatcaaatcaattcactcaaaatcaatt 26559864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 348
Target Start/End: Original strand, 28763371 - 28763496
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaat-gctcgagaaaattgacataagctgttttcatgagttctcccaaggag 321  Q
    ||||||| ||||||||||| ||||  | |||||||||| |||| |||||||  |||   ||||||||  ||||||||||||||| |||||||||||  ||    
T  28763371 aagttgtttttataagctatattgctgaacttatgaaa-taagttgaaaaaaagcttatgaaaattgttataagctgttttcataagttctcccaaacag 28763469  T
Q  322 tcttgcaaaacttgtgtcaatagataa 348  Q
    |||  |||||||| ||| | |||||||    
T  28763470 tctcacaaaacttatgttactagataa 28763496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 585 - 647
Target Start/End: Complemental strand, 32994215 - 32994153
Alignment:
Q  585 tttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||||||||| ||| ||| ||| ||||||||||||||| ||||| |||| | ||||||||||    
T  32994215 tttaccttcaactcactttcagccagaatcaattttacataatcagttcattcaaaatcaatt 32994153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 611 - 649
Target Start/End: Original strand, 35550309 - 35550347
Alignment:
Q  611 aatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  35550309 aatcaattttacaaaatcaattcaatcaaaatcaatttt 35550347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 37444563 - 37444493
Alignment:
Q  147 cttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttttcg 217  Q
    |||||||||||||||||| ||  || |||||||  ||||  ||||||||||  ||||||||||||||||||    
T  37444563 cttatcatgataagcgcttatgtataagctattactataacaaaagataaagtaaagttaaattgttttcg 37444493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 463 - 537
Target Start/End: Original strand, 37684384 - 37684458
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaa 537  Q
    |||||||||||| ||  ||||||||||||| |||||| ||| | ||   ||||||||||||| ||||||||||||    
T  37684384 gaattgattttgtctccagaattgattctacttgaagttaggatttgtggcttttgattctaaaattgattttaa 37684458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 571 - 649
Target Start/End: Complemental strand, 38715270 - 38715192
Alignment:
Q  571 caaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||||||| |||||||||  | || ||| ||||| ||| |||||||| | ||||||||||||| | ||||||||||||    
T  38715270 caaacataaatcactttacacttaactcaattttaactaaaatcaattctgcaaaatcaattcaattaaaatcaatttt 38715192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 41475204 - 41475138
Alignment:
Q  151 tcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttttcg 217  Q
    ||||||||||| || ||  || ||||| |||||||| ||||||||||| | ||||||||||||||||    
T  41475204 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaattgttttcg 41475138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 445 - 546
Target Start/End: Complemental strand, 4663027 - 4662926
Alignment:
Q  445 tttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaa 544  Q
    |||||||||||||   | ||||||||||||| |   ||||| |||||| |||||||||| | ||  |||||||| ||||| |||||||||| |||| |||    
T  4663027 tttggttgctttcggatagaattgattttgcatccggaatttattctacttgaagctaggatttgtagcttttgtttctagaattgatttttacacacaa 4662928  T
Q  545 at 546  Q
    ||    
T  4662927 at 4662926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 5404501 - 5404578
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatag 186  Q
    ||||||||||| |||||||| || ||| || | |||||||||||||||||| | ||  || || ||||||||||||||    
T  5404501 ttggataaacaacttatttgcagattaaagaataagtgcttatcatgataaccacttgtatataagctatttttatag 5404578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 595 - 648
Target Start/End: Original strand, 5893332 - 5893385
Alignment:
Q  595 attcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaattt 648  Q
    ||||||||||||  | ||||||||||||| |||||||| ||| |||||||||||    
T  5893332 attcatttttagtcacaatcaattttacagaatcaattaactcaaaatcaattt 5893385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 461 - 546
Target Start/End: Original strand, 8693738 - 8693823
Alignment:
Q  461 ttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaat 546  Q
    ||||||||| ||||||| |||| |||||| |||||||| ||| || ||  | ||| ||||||||||||||| ||| | ||||||||    
T  8693738 ttgaattgaatttgcctctagagttgattatagttgaaactataagttgtaacttgtgattctataattgacttttatactcaaat 8693823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 16211034 - 16210965
Alignment:
Q  147 cttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttttc 216  Q
    |||||||||||| || |||||  || |||||||| ||||| ||| ||||||| ||||||| |||||||||    
T  16211034 cttatcatgatacgcactcatgtataagctatttctatagtaaatgataaaataaagttacattgttttc 16210965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 332 - 373
Target Start/End: Original strand, 26479897 - 26479938
Alignment:
Q  332 cttgtgtcaatagataaactcaaatgagtcaatccaaacagg 373  Q
    ||||||||||||||||| || |||| ||||||||||||||||    
T  26479897 cttgtgtcaatagataagcttaaataagtcaatccaaacagg 26479938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 585 - 626
Target Start/End: Complemental strand, 32681279 - 32681238
Alignment:
Q  585 tttaccttcaattcatttttagctagaatcaattttacaaaa 626  Q
    |||| |||||||||||||||||  ||||||||||||||||||    
T  32681279 tttatcttcaattcatttttagtgagaatcaattttacaaaa 32681238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 39881855 - 39881770
Alignment:
Q  187 aaaaagataaaacaaagttaaattgttttcgcatacaagttgtgtttataagctagattggagtacttatgaaaataagctgaaaa 272  Q
    |||||||||||| ||||| |||||||||| | | | || |||| |||||||||||   |||||  |||||| ||||||||||||||    
T  39881855 aaaaagataaaataaagtcaaattgtttttgtaaataaattgtttttataagctatcatggagagcttatggaaataagctgaaaa 39881770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 4e-25; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 480 - 598
Target Start/End: Original strand, 41788312 - 41788439
Alignment:
Q  480 agaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgt---------ttttatataaatgtata 570  Q
    ||||||||||||| || ||||||||||||  | ||||||| ||||||||||||||||||||||||||||| |||         |||||||| ||||||||    
T  41788312 agaattgattctacttaaagctagaaattgaaacttttgagtctataattgattttaacactcaaatttgctgttcaactcacttttatattaatgtata 41788411  T
Q  571 caaacataattcactttaccttcaattc 598  Q
    ||||||||| ||||||||||||||||||    
T  41788412 caaacataaatcactttaccttcaattc 41788439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 464 - 544
Target Start/End: Original strand, 27571842 - 27571922
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaa 544  Q
    |||||||||| |||  ||||||||||||| |||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  27571842 aattgattttacctcaagaattgattctacttgaagttagaaattggagcttttgattctagaattgattttaacactcaa 27571922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 281 - 370
Target Start/End: Complemental strand, 34464230 - 34464141
Alignment:
Q  281 gaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaac 370  Q
    |||||||| |||||||||||||||| ||| |||||||  ||||||| |||| || ||||||||||||||||||||| | |||||||||||    
T  34464230 gaaaattgtcataagctgttttcataagtcctcccaaaaagtcttgtaaaatttatgtcaatagataaactcaaataaatcaatccaaac 34464141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 444 - 548
Target Start/End: Original strand, 45004980 - 45005084
Alignment:
Q  444 gtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactca 543  Q
    ||||||||||| || | | |||||||||||||||| ||||||||||||| ||||||||| ||||| |||  ||||||| || ||||||| ||| ||||||    
T  45004980 gtttggttgctctcgaatagaattgattttgccttcagaattgattctacttgaagctaaaaattggaggctttgattatagaattgatcttagcactca 45005079  T
Q  544 aattt 548  Q
    |||||    
T  45005080 aattt 45005084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 425 - 647
Target Start/End: Original strand, 40491519 - 40491750
Alignment:
Q  425 gtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattcta 524  Q
    |||||||||| | ||||| | |||||||||||| |    ||||||||||||||| |||||||| |||| |||||| ||    ||  ||||||||||||||    
T  40491519 gtagaattgattctaacatggttggttgctttcgaagataattgattttgccttcagaattgactctacttgaagttaagttttgtagcttttgattcta 40491618  T
Q  525 taattgattttaacactcaaatttgttgttt---------ttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatca 615  Q
     |||||| ||| |||| |||||||   ||||         ||| || ||||||| |||| |||| ||||||||||||||| ||| ||||||  | |||||    
T  40491619 gaattgacttttacacacaaatttaaagtttaactcacttttacatgaatgtatccaaaaataaatcactttaccttcaactcacttttagtcaaaatca 40491718  T
Q  616 attttacaaaatcaattcactaaaaatcaatt 647  Q
    |||||||| |||||||||||| ||||||||||    
T  40491719 attttacagaatcaattcactcaaaatcaatt 40491750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 5489952 - 5489874
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacact 541  Q
    ||||| |||||||||  | ||||||||||| |||| |||||||||| |||||||||||| |||||||||||||||||||    
T  5489952 gaattaattttgcctccaaaattgattctacttgatgctagaaattggagcttttgattatataattgattttaacact 5489874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 251 - 373
Target Start/End: Complemental strand, 19302602 - 19302480
Alignment:
Q  251 acttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaac 350  Q
    ||||||||||||||| ||||||| | |   |||||||| |||||||||||||||| | |||||||||  | |||  |||||||| ||||| ||||||| |    
T  19302602 acttatgaaaataagttgaaaaaagtttatgaaaattgtcataagctgttttcataaattctcccaaatattctcacaaaacttatgtcagtagataagc 19302503  T
Q  351 tcaaatgagtcaatccaaacagg 373  Q
    |||||| ||||||| ||||||||    
T  19302502 tcaaataagtcaattcaaacagg 19302480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 173 - 377
Target Start/End: Original strand, 48469992 - 48470201
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgttttcgcatacaa-----gttgtgtttataagctagattggagtacttatgaaaataagct 267  Q
    |||||||| || || |||||||||||  ||||||||||||||| | ||| ||     ||||| || ||||||||  ||| |  ||||||||| |||||||    
T  48469992 agctatttctacagcaaaagataaaattaagttaaattgtttttgtatataatataagttgttttcataagctattttgaataacttatgaacataagct 48470091  T
Q  268 gaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatcca 367  Q
     ||||| |||   ||||| || |||||||||||||||| |||||||||||  | |||   ||||||| |||| |||||||| ||||||| || ||||||     
T  48470092 caaaaaagcttatgaaaaatgccataagctgttttcataagttctcccaaacaatctcataaaacttatgtctatagataagctcaaataagccaatcct 48470191  T
Q  368 aacaggccct 377  Q
    ||||||||||    
T  48470192 aacaggccct 48470201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 214
Target Start/End: Complemental strand, 20881828 - 20881717
Alignment:
Q  103 aaatgcttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaa 202  Q
    ||||| || ||| |||| |||||||||||||||||| | |||  ||||||||||||||| || ||  || |||||| | ||||| |||||||||||| ||    
T  20881828 aaatgtttagatgaacaacttatttgtagtttatagcacaagcacttatcatgataagctcttatgtatgagctatatctatagcaaaagataaaacgaa 20881729  T
Q  203 gttaaattgttt 214  Q
    ||||||||||||    
T  20881728 gttaaattgttt 20881717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 281 - 375
Target Start/End: Complemental strand, 4970801 - 4970707
Alignment:
Q  281 gaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcc 375  Q
    |||||||| |||||| ||||||||| |||||||||||  |||||  ||| |||| |||||  |||||| ||||||| ||||||||||||||||||    
T  4970801 gaaaattgccataagttgttttcataagttctcccaaacagtctcacaagacttatgtcacgagataagctcaaataagtcaatccaaacaggcc 4970707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 554 - 632
Target Start/End: Complemental strand, 40795995 - 40795917
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaatt 632  Q
    ||||| || ||||||| ||| |||||  |||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  40795995 ttttacatgaatgtatccaatcataaaccactttaccttcaattcatttttacctaacatcaattttacaaaatcaatt 40795917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 482 - 555
Target Start/End: Complemental strand, 30182383 - 30182310
Alignment:
Q  482 aattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgttt 555  Q
    ||||||||||| ||||||||| |||||  |||||||||||||| |||| ||||| |||||||||||| ||||||    
T  30182383 aattgattctacttgaagctaaaaattgtagcttttgattctagaattaatttttacactcaaatttattgttt 30182310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 231 - 356
Target Start/End: Complemental strand, 33601469 - 33601344
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaa 330  Q
    |||||||||||  || ||| |||||||||  |||||||||||| |||   ||||| || |||||||||||||||| |||||||  || ||||||  ||||    
T  33601469 tttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaagagtctcacaaa 33601370  T
Q  331 acttgtgtcaatagataaactcaaat 356  Q
    |||| || |||||||||| |||||||    
T  33601369 acttatgccaatagataagctcaaat 33601344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 548
Target Start/End: Complemental strand, 38123756 - 38123687
Alignment:
Q  479 tagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    |||||||||||||| |||||||||||||||  ||||| | |||||| |||||||||| ||||||||||||    
T  38123756 tagaattgattctacttgaagctagaaattgtagcttctaattctagaattgatttttacactcaaattt 38123687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 581 - 633
Target Start/End: Complemental strand, 39734691 - 39734639
Alignment:
Q  581 tcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattc 633  Q
    |||||||||||| || ||| |||||||||||||||||||||||||||||||||    
T  39734691 tcactttaccttaaactcagttttagctagaatcaattttacaaaatcaattc 39734639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 46078089 - 46078137
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  46078089 tacataagttatttttatagaaaaagataaaacaaagttaaattgtttt 46078137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 420375 - 420457
Alignment:
Q  235 taagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    ||||||| ||||||| ||||||||||||||| ||||||| |||  |||||| || |||||  ||||||||| |||||||||||    
T  420375 taagctatattggagaacttatgaaaataagttgaaaaaggctttagaaaactgtcataaattgttttcataagttctcccaa 420457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 463 - 618
Target Start/End: Original strand, 15050271 - 15050436
Alignment:
Q  463 gaattgattttgcctttagaattgattctag-ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgt-------- 553  Q
    ||||||||||||| | |||||||||||  |  |||||||||||||||||||||||  |||||| |||||||||| ||| | |||| | | ||            
T  15050271 gaattgattttgcttgtagaattgatttaatcttgaagctagaaattagagctttccattctaaaattgatttttacaatgaaatgtttggttcaaccca 15050370  T
Q  554 -ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaatt 618  Q
     ||||||  |||| ||| ||||||||| | |||||||| | |||||||||||||||||||||||||    
T  15050371 cttttatggaaatatatccaaacataaattactttaccctaaattcatttttagctagaatcaatt 15050436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 234 - 371
Target Start/End: Original strand, 20526460 - 20526597
Alignment:
Q  234 ataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaact 333  Q
    ||||||||  |||||| ||| ||||||||||||| ||||  |||   ||||| ||  |||| |||||||||| ||||||| |||  |||||  ||||| |    
T  20526460 ataagctattttggagaactaatgaaaataagctaaaaacagcttacgaaaaatgtgataaactgttttcataagttctctcaaacagtctcacaaaatt 20526559  T
Q  334 tgtgtcaatagataaactcaaatgagtcaatccaaaca 371  Q
    | |  |||||||||||||||||| ||||||||||||||    
T  20526560 tctaccaatagataaactcaaataagtcaatccaaaca 20526597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 550 - 647
Target Start/End: Complemental strand, 42481900 - 42481803
Alignment:
Q  550 ttgtttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||||||| ||||||| || | ||||||| ||| ||||| ||||| ||| ||||    ||||||||||||||| |||||||||||| ||||||||||    
T  42481900 ttgtttttagataaatgcatccgaacataaatcattttacattcaactcactttttttcagaatcaattttacataatcaattcacttaaaatcaatt 42481803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 647
Target Start/End: Original strand, 35105254 - 35105330
Alignment:
Q  571 caaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||||||| ||||||| | |||||| || ||| | | ||||||||||||| |||||||||||||| ||||||||||    
T  35105254 caaacataaatcacttttcattcaatccactttcatccagaatcaattttaaaaaatcaattcactcaaaatcaatt 35105330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 38500111 - 38500059
Alignment:
Q  112 gataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgct 164  Q
    ||||||||||||||||| ||||||||| | ||| |||||||||||||||||||    
T  38500111 gataaacagcttatttgcagtttatagcacaagcgcttatcatgataagcgct 38500059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 11619222 - 11619131
Alignment:
Q  226 ttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    |||| |||||||||||  |||||| |||||||||| |||| ||||||| |||   |||||||| |||||| ||||||||| | |||||||||    
T  11619222 ttgtttttataagctacgttggagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataagttgttttcataaattctcccaa 11619131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 215
Target Start/End: Original strand, 20269527 - 20269566
Alignment:
Q  176 tatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  20269527 tatttttatagcaaaagataaaacaaagttaaattgtttt 20269566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 21568559 - 21568468
Alignment:
Q  226 ttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    |||| ||||||||||| ||||||| ||||||| || |||| ||||||  |||   ||||||||  ||||||||||||||| |||||||||||    
T  21568559 ttgtttttataagctatattggagaacttatggaactaagttgaaaagagcttatgaaaattgttataagctgttttcataagttctcccaa 21568468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 563 - 618
Target Start/End: Complemental strand, 29829366 - 29829311
Alignment:
Q  563 aatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaatt 618  Q
    ||||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||||||    
T  29829366 aatgtatccaaacataaatcactttacattcaactcatttttagccagaatcaatt 29829311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 39279646 - 39279749
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcat-acattagctatttttatagaaaaagataaaacaaagttaa 207  Q
    ||||||||||||||||||||||  |||  | | ||| |||||| || ||||| ||| || |||| |||| ||| ||||| ||||||||||||||||||||    
T  39279646 ttggataaacagcttatttgtatcttaaggcacaagggcttattataataagtgcttattacataagctgtttctatagcaaaagataaaacaaagttaa 39279745  T
Q  208 attg 211  Q
    ||||    
T  39279746 attg 39279749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 570 - 648
Target Start/End: Complemental strand, 48158991 - 48158913
Alignment:
Q  570 acaaacataattcactttaccttcaattca-tttttagctagaatcaattttacaaaatcaattcactaaaaatcaattt 648  Q
    ||||||||||| || ||||||||||| ||| ||||||| | ||||||||| ||||||||||||||||| | |||||||||    
T  48158991 acaaacataat-cattttaccttcaactcactttttagtttgaatcaattatacaaaatcaattcactcacaatcaattt 48158913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 317
Target Start/End: Complemental strand, 19022652 - 19022558
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||| |||| |   ||   |||||||| |||||| ||||||||| | |||||||||    
T  19022652 aagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttgttttcataaattctcccaa 19022558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 27863893 - 27863843
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataa 159  Q
    ||||||||||| ||||||||||| |||||| | ||||||||||||||||||    
T  27863893 ttggataaacaacttatttgtagcttatagcacaagtgcttatcatgataa 27863843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 28613656 - 28613614
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  28613656 agctatttttataacaaaagataaaacaaagttaaattgtttt 28613614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 363
Target Start/End: Complemental strand, 45790492 - 45790357
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagt 322  Q
    ||||||| ||||||| ||| ||||||  ||||||||||||||||||||||| |||    ||||||| |||||| | ||||||| |||||||| ||  | |    
T  45790492 aagttgtttttataaactatattggataacttatgaaaataagctgaaaaa-gcttttaaaaattgtcataagttattttcataagttctccgaa--act 45790396  T
Q  323 cttgcaaaacttgtgtcaatagataaactcaaatgagtcaa 363  Q
    | |  ||||||| |||||||||||||| |||||| ||||||    
T  45790395 cat--aaaacttatgtcaatagataaattcaaataagtcaa 45790357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 38499959 - 38499874
Alignment:
Q  244 ttggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaa 329  Q
    |||||| |||||||||||||||||| |||| |||   ||||| || ||||||||||||| |  ||||||||||| |||||| ||||    
T  38499959 ttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagctgttttgaaaagttctcccaaagagtctcgcaa 38499874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 585 - 641
Target Start/End: Complemental strand, 597918 - 597862
Alignment:
Q  585 tttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaa 641  Q
    ||||||||||| ||| ||||||| | ||||||||||||| | |||||||||||||||    
T  597918 tttaccttcaactcagttttagccaaaatcaattttacatactcaattcactaaaaa 597862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 464 - 548
Target Start/End: Original strand, 1410942 - 1411026
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    |||| |||||||||||||||||||||||| |||||| || || ||  || ||||| || || |||||||||| |||| |||||||    
T  1410942 aattaattttgcctttagaattgattctatttgaagttataatttgtagattttgtttttagaattgattttcacacgcaaattt 1411026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 21568824 - 21568772
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagc 161  Q
    ||||||||||||||| |||| || |||||| | ||||||||||||||||||||    
T  21568824 ttggataaacagcttgtttgcagcttatagcataagtgcttatcatgataagc 21568772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 33673184 - 33673236
Alignment:
Q  327 caaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggccctag 379  Q
    |||| ||| ||||| ||||||| |||||||||||||||||||| |||||||||    
T  33673184 caaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccctag 33673236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 464 - 548
Target Start/End: Complemental strand, 41386920 - 41386836
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    |||||||||  |||| ||||||||||||| |||||||||| | ||  ||||||| |||||| ||||||| || |||| |||||||    
T  41386920 aattgatttcaccttcagaattgattctacttgaagctaggatttgtagcttttaattctagaattgatatttacacacaaattt 41386836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 215
Target Start/End: Complemental strand, 11700385 - 11700346
Alignment:
Q  176 tatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  11700385 tatttttatagaaaaagataaaataaagttacattgtttt 11700346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 555
Target Start/End: Complemental strand, 23441335 - 23441244
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgttt 555  Q
    ||||||||||||||  | ||||||||||||||  || ||||| || |  ||||||||| |  |||||||||| || ||||||||||||||||    
T  23441335 aattgattttgcctccataattgattctagttagagttagaagttgggacttttgattttggaattgattttgaccctcaaatttgttgttt 23441244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 40196251 - 40196306
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgct 164  Q
    ||||||||||| ||||||||||||||| || | | | |||||||||||||||||||    
T  40196251 ttggataaacaacttatttgtagtttacagcacatgcgcttatcatgataagcgct 40196306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 480 - 554
Target Start/End: Complemental strand, 598034 - 597961
Alignment:
Q  480 agaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    ||||||||||||| ||||||||| |||||  |||||| |||||||||||||||| |  |||| |||||| |||||    
T  598034 agaattgattctacttgaagcta-aaattgtagctttcgattctataattgattcttgcactaaaatttattgtt 597961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 317
Target Start/End: Complemental strand, 19214473 - 19214379
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    ||||||| | ||||||||| |||| || ||||||||||||||| ||||| | | |   |||||||| |||  ||||||||||| |||||||||||    
T  19214473 aagttgtttgtataagctatattgtagaacttatgaaaataagttgaaacaagtttatgaaaattgtcatttgctgttttcataagttctcccaa 19214379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 243 - 317
Target Start/End: Original strand, 28614456 - 28614530
Alignment:
Q  243 attggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    ||||||| |||||||||| ||| |||||||| ||| | ||||||||  ||| | ||||||||| |||||||||||    
T  28614456 attggagaacttatgaaattaaactgaaaaaagcttgtgaaaattgttatatgttgttttcataagttctcccaa 28614530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 483 - 533
Target Start/End: Complemental strand, 28725138 - 28725088
Alignment:
Q  483 attgattctagttgaagctagaaattagagcttttgattctataattgatt 533  Q
    ||||||| || |||||||||||| ||  |||||||||||||||||||||||    
T  28725138 attgattatacttgaagctagaatttgtagcttttgattctataattgatt 28725088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 327 - 373
Target Start/End: Original strand, 44822065 - 44822111
Alignment:
Q  327 caaaacttgtgtcaatagataaactcaaatgagtcaatccaaacagg 373  Q
    |||||||| |||||  |||||||||||||| ||||||||||||||||    
T  44822065 caaaacttatgtcagcagataaactcaaataagtcaatccaaacagg 44822111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 45004716 - 45004762
Alignment:
Q  175 ctatttttatagaaaaagataaaacaaagttaaattgttttcgcata 221  Q
    |||||||||||| ||||||||||| ||||||||||||| || |||||    
T  45004716 ctatttttatagcaaaagataaaataaagttaaattgtatttgcata 45004762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 46280331 - 46280289
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaa 273  Q
    ||||||||||| ||||||| ||||||||||||| |||||||||    
T  46280331 tttataagctatattggagaacttatgaaaataggctgaaaaa 46280289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 572 - 649
Target Start/End: Complemental strand, 5489857 - 5489781
Alignment:
Q  572 aaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    |||||||| | ||||||| ||||| ||||||||| |  |||||||||| ||| |||||||||||| |||| |||||||    
T  5489857 aaacataaataactttacattcaactcatttttaaccggaatcaattt-acacaatcaattcacttaaaaccaatttt 5489781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 466 - 555
Target Start/End: Original strand, 23458041 - 23458130
Alignment:
Q  466 ttgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgttt 555  Q
    ||||||||||||  | ||||||||||||||  || ||||| || |  ||||||| | || |||||||||| || ||||||||||||||||    
T  23458041 ttgattttgcctccataattgattctagttagagttagaagttgggacttttgaatttagaattgattttgaccctcaaatttgttgttt 23458130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 30570990 - 30570917
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttca 304  Q
    ||||||| ||| ||||||| |||||||||| |||  ||||||| |||   |||||||| |||||||||||||||    
T  30570990 tttataacctacattggagaacttatgaaattaacatgaaaaaagcttatgaaaattgtcataagctgttttca 30570917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 563 - 604
Target Start/End: Original strand, 35222074 - 35222115
Alignment:
Q  563 aatgtatacaaacataattcactttaccttcaattcattttt 604  Q
    ||||||||||||||||| ||||||||||||||| | ||||||    
T  35222074 aatgtatacaaacataaatcactttaccttcaactaattttt 35222115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 36517650 - 36517735
Alignment:
Q  293 aagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    |||||||||| || |||||||||||  ||||||  ||||||| || || ||| ||| ||||||| | | |||||||||||||||||    
T  36517650 aagctgttttaataagttctcccaaacagtcttagaaaacttatgccagtagctaagctcaaataaatgaatccaaacaggcccta 36517735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 40009387 - 40009460
Alignment:
Q  142 aagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    |||| ||||||||||| |||||| ||  || |||| ||||||||  |||||| |||| ||||||||||||||||    
T  40009387 aagtacttatcatgattagcgcttatgtataagctgtttttataacaaaagacaaaataaagttaaattgtttt 40009460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 567 - 632
Target Start/End: Complemental strand, 44856784 - 44856719
Alignment:
Q  567 tatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaatt 632  Q
    ||||||||||||| || |||||| ||||| ||| ||||||  |||||||| ||||| |||||||||    
T  44856784 tatacaaacataaatcgctttacattcaactcacttttaggcagaatcaactttaccaaatcaatt 44856719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 45264048 - 45264085
Alignment:
Q  178 tttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  45264048 tttttatagaaaaagatgaaataaagttaaattgtttt 45264085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 4e-25; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 243 - 370
Target Start/End: Original strand, 9107113 - 9107240
Alignment:
Q  243 attggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaat 342  Q
    ||||||| |||||||||||| ||| |||||| | | | |||||||| | ||||||||||||||||||||||||||  | |||  |||||||| ||||| |    
T  9107113 attggagaacttatgaaaattagcagaaaaaagtttgtgaaaattgtcctaagctgttttcatgagttctcccaaacattctcacaaaacttatgtcact 9107212  T
Q  343 agataaactcaaatgagtcaatccaaac 370  Q
    |||||||||||||| |||||||||||||    
T  9107213 agataaactcaaataagtcaatccaaac 9107240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 109 - 372
Target Start/End: Complemental strand, 9202934 - 9202666
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    ||||||||||| |||||||| || |||||| | ||||| ||||||||||||| ||| ||| || |||||||| | ||| ||||||||||| |||||||||    
T  9202934 ttggataaacatcttatttgcagcttatagcacaagtgtttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaa 9202835  T
Q  209 ttgttttcgcat-----acaagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttc 303  Q
    ||||||||  ||     | ||| ||| || ||||| ||  ||| || |||||||||||||||||| |||  |||   ||| | || |||||||||||| |    
T  9202834 ttgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataagctgtttcc 9202735  T
Q  304 atgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacag 372  Q
    || |||| ||| ||  |||||| |||||||| || ||  |||||| ||||||| |||||||||| ||||    
T  9202734 attagttttccgaaatagtcttacaaaacttatgccaggagataagctcaaataagtcaatccatacag 9202666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 234 - 377
Target Start/End: Complemental strand, 7706054 - 7705911
Alignment:
Q  234 ataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaact 333  Q
    |||||||| ||||||| |||| ||||||||||| |||||| ||  | ||||| || |||||||||||||||| ||||||||||| |||  |  |||||||    
T  7706054 ataagctatattggagaacttgtgaaaataagccgaaaaaagcaggtgaaaactgtcataagctgttttcataagttctcccaaagagcgtcacaaaact 7705955  T
Q  334 tgtgtcaatagataaactcaaatgagtcaatccaaacaggccct 377  Q
    | ||  | ||||||  ||||||| ||||||||||||||||||||    
T  7705954 tatgctagtagatatgctcaaataagtcaatccaaacaggccct 7705911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 231 - 377
Target Start/End: Complemental strand, 12857397 - 12857251
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaa 330  Q
    ||||||||||| ||||||| |||||  |||||||||||||||| ||| | |||||||| |||||| ||||||||| ||||||||  |  ||| |  ||||    
T  12857397 tttataagctatattggagaacttacaaaaataagctgaaaaaagcttgtgaaaattgtcataagttgttttcataagttctccggaaaagtttcacaaa 12857298  T
Q  331 acttgtgtcaatagataaactcaaatgagtcaatccaaacaggccct 377  Q
    ||||  |||||||||||| ||||||| |  ||||||||||| |||||    
T  12857297 acttacgtcaatagataagctcaaataaaccaatccaaacaagccct 12857251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 231 - 377
Target Start/End: Complemental strand, 12857764 - 12857618
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaa 330  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| | | | |||||||| |||||| ||||||||| ||||||||  |  ||| |  ||||    
T  12857764 tttataagctatattggagaacttatgaaaataagctgaaaaaaggttgtgaaaattgtcataagttgttttcataagttctccggaacagtttcacaaa 12857665  T
Q  331 acttgtgtcaatagataaactcaaatgagtcaatccaaacaggccct 377  Q
    ||||  |||||||||| | ||||||| |  ||||||||||| |||||    
T  12857664 acttacgtcaatagatgagctcaaataaaccaatccaaacaagccct 12857618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 223 - 373
Target Start/End: Complemental strand, 16937950 - 16937800
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagt 322  Q
    ||||||| |||||| |||| ||||||| ||||| ||||||||||||||||| |||   |||| ||| |||||||||||||||| |||||| ||||  | |    
T  16937950 aagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtcataagctgttttcataagttcttccaaacact 16937851  T
Q  323 cttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacagg 373  Q
    ||  |||||||| ||  | ||||||| ||||||| || |||||||||||||    
T  16937850 ctcacaaaacttatgctagtagataagctcaaataagccaatccaaacagg 16937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 244 - 376
Target Start/End: Original strand, 10639977 - 10640109
Alignment:
Q  244 ttggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaata 343  Q
    |||||| |||||||||||||||||  |||| |||   ||||| || |||||||||||||||| |||||||||||  | | |  |||||||| ||||| ||    
T  10639977 ttggagaacttatgaaaataagctagaaaaagcttatgaaaaatgtcataagctgttttcataagttctcccaaacaatatcacaaaacttatgtcagta 10640076  T
Q  344 gataaactcaaatgagtcaatccaaacaggccc 376  Q
    ||||||||||||| ||  |||||||||||||||    
T  10640077 gataaactcaaataagctaatccaaacaggccc 10640109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 565 - 647
Target Start/End: Original strand, 14299416 - 14299498
Alignment:
Q  565 tgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||| |||||| || ||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||||| ||||| ||||    
T  14299416 tgtattcaaacacaaatcactttaccttcaactcacttttatctagaatcaattttacacaatcaattcactcaaaataaatt 14299498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 12425462 - 12425563
Alignment:
Q  116 aacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    |||| |||||||| || |||||||| ||||| |||||||||||| |||| ||  || | |||||| ||||| ||||||||||| ||||||||||||||||    
T  12425462 aacatcttatttgcagcttatagtacaagtgtttatcatgataaacgcttatgtataaactatttatatagtaaaagataaaataaagttaaattgtttt 12425561  T
Q  216 cg 217  Q
    ||    
T  12425562 cg 12425563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 370
Target Start/End: Original strand, 39105360 - 39105615
Alignment:
Q  121 cttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttttcgca- 219  Q
    |||||||| || |||||| | ||||||||||||||||||||||| ||  || |||||||| |||||  ||| || |||  ||||||||||||||||| |     
T  39105360 cttatttgcagcttatagcataagtgcttatcatgataagcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtat 39105459  T
Q  220 ----tacaagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctccc 315  Q
        || ||  ||| || ||||||||  |||||| ||||||||||||||||| ||||  |||   ||| | || |||||||||||||||| | |||||||    
T  39105460 aagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcataaattctccc 39105559  T
Q  316 -aaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaac 370  Q
     ||  |||||   ||||||| |  |  ||||||||||||||| |||||||||||||    
T  39105560 aaaaaagtctcataaaacttatacccctagataaactcaaataagtcaatccaaac 39105615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 334
Target Start/End: Complemental strand, 16458100 - 16457935
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgttttcgcatac-----aagttgtgtttataagctagattggagtacttatgaaaataagct 267  Q
    |||||||||||||| ||||||||||| ||  |||||||||||| | |||      ||||||| ||||| ||||| ||||||| |||| ||||||||| ||    
T  16458100 agctatttttatagcaaaagataaaataac-ttaaattgtttttgtatatgctataagttgtttttatgagctaaattggagaacttgtgaaaataaact 16458002  T
Q  268 gaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaactt 334  Q
    |||||  |||   ||||| || |||||||||||||||| |||||||||||  |||||  ||||||||    
T  16458001 gaaaagagcttatgaaaactgtcataagctgttttcataagttctcccaaacagtctcacaaaactt 16457935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 226 - 371
Target Start/End: Original strand, 32009698 - 32009844
Alignment:
Q  226 ttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcga-gaaaattgacataagctgttttcatgagttctcccaaggagtct 324  Q
    |||| ||||||||||| ||||||| ||||||||||| ||| | ||||| |||  | |||||||| || ||||||||||||| |||| | ||||  |||||    
T  32009698 ttgtttttataagctatattggagaacttatgaaaacaagttcaaaaaagctttatgaaaattgtcacaagctgttttcataagtttttccaaatagtct 32009797  T
Q  325 tgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaaca 371  Q
      ||||||||  ||||| ||||| ||||||||  |||||||||||||    
T  32009798 cacaaaacttaggtcaacagatagactcaaatatgtcaatccaaaca 32009844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 317
Target Start/End: Original strand, 29925789 - 29925938
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgttttcgcat-----acaagttgtgtttataagctagattggagtacttatgaaaataagct 267  Q
    |||||||||||||| ||||||||||| |  ||||||||||||  | ||     | ||||||| |  |||||||| ||||||| ||||||||||||||| |    
T  29925789 agctatttttatagcaaaagataaaatagcgttaaattgtttctgtatgtgctataagttgtttacataagctatattggagaacttatgaaaataagtt 29925888  T
Q  268 gaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    ||||||  | |  ||| |||| |||||||||||||||| |||||||||||    
T  29925889 gaaaaaaacacatgaacattgtcataagctgttttcataagttctcccaa 29925938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 463 - 540
Target Start/End: Complemental strand, 34250457 - 34250380
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacac 540  Q
    ||||||||| ||||| |||||||||||||| |||| ||||||||||  |||||||||||||| ||||| |||| ||||    
T  34250457 gaattgattatgcctctagaattgattctacttgatgctagaaattgtagcttttgattctacaattgtttttcacac 34250380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 220 - 305
Target Start/End: Original strand, 37954686 - 37954771
Alignment:
Q  220 tacaagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcat 305  Q
    |||||||||| ||||||||||| ||||||| || |||||||||||| ||||||| |||   |||||||  ||||||||||||||||    
T  37954686 tacaagttgtttttataagctatattggagaacatatgaaaataagttgaaaaaagctaatgaaaattttcataagctgttttcat 37954771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 376
Target Start/End: Complemental strand, 42500347 - 42500157
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgttttcgcatacaagttgtgtttataagctagattggagtacttatgaaaataagctgaaaa 272  Q
    |||||||||||||  ||||||||||| ||||||||||||||||           ||||| ||||||||| ||||||| ||||||||||||||| ||||||    
T  42500347 agctatttttatatcaaaagataaaataaagttaaattgtttt-----------tgtgtatataagctatattggagaacttatgaaaataagttgaaaa 42500259  T
Q  273 atgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacag 372  Q
    | |||   |||||||| | |||| ||||| ||| |||||| |||| ||||||  |||||||| ||||| ||| |||   ||||| |  ||||||||||||    
T  42500258 a-gcttatgaaaattgtcgtaagttgtttccataagttct-ccaaagagtctcacaaaacttatgtcagtaggtaagtccaaataaaccaatccaaacag 42500161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 1465205 - 1465105
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    |||||||||||| ||||| | ||||||||| | |||||||||||| |||||||||| ||  || |||||||| ||||| | | ||||||| |||||||||    
T  1465205 ttggataaacagattattcgcagtttatagcataagtgcttatcaagataagcgcttatgtataagctatttctatagcataggataaaataaagttaaa 1465106  T
Q  209 t 209  Q
    |    
T  1465105 t 1465105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 464 - 535
Target Start/End: Complemental strand, 3738213 - 3738142
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    ||||||||||  ||||| |||||||||||||||||| ||||| ||  || ||||||||||||||||||||||    
T  3738213 aattgattttaactttaaaattgattctagttgaagttagaagttgtagtttttgattctataattgatttt 3738142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 377
Target Start/End: Original strand, 39594751 - 39594964
Alignment:
Q  168 acattagctatttttatagaaaaagataaaacaaagttaaattgttttcgcata-----caagttgtgtttataagctagattggagtacttatgaaaat 262  Q
    |||| |||||||| ||||||||||||||||| |||| |||||||||||||||||      ||| ||| || ||||| ||  |||  | ||||||||||||    
T  39594751 acataagctatttctatagaaaaagataaaataaag-taaattgttttcgcataagttgtaagctgttttcataagatatcttgttgaacttatgaaaat 39594849  T
Q  263 aagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtca 362  Q
    ||||||||||   ||  | || |||  | | |||||||||||| |||| ||||||  | |||  |||||||| ||||  ||||||| ||||||| |||||    
T  39594850 aagctgaaaacaacttaataacattatcttcagctgttttcataagttgtcccaaacaatctaacaaaacttatgtcggtagataagctcaaataagtca 39594949  T
Q  363 atccaaacaggccct 377  Q
    ||||||||| |||||    
T  39594950 atccaaacaagccct 39594964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 494 - 555
Target Start/End: Complemental strand, 24306171 - 24306110
Alignment:
Q  494 ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgttt 555  Q
    |||||| ||||||||  | ||||||||||||||||||||||| |||||||||||| ||||||    
T  24306171 ttgaagttagaaattgtaacttttgattctataattgatttttacactcaaatttattgttt 24306110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 494 - 555
Target Start/End: Original strand, 24367145 - 24367206
Alignment:
Q  494 ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgttt 555  Q
    |||||| ||||||||  | ||||||||||||||||||||||| |||||||||||| ||||||    
T  24367145 ttgaagttagaaattgtaacttttgattctataattgatttttacactcaaatttattgttt 24367206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 42858087 - 42858172
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    ||||| |||||| || ||||||||||| || |||||| ||| | || |||||||| ||||||||||||||||| |||| |||||||    
T  42858087 gaattcattttgactctagaattgattttacttgaagttaggatttggagcttttaattctataattgattttcacacacaaattt 42858172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 205
Target Start/End: Original strand, 28776859 - 28776955
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagtt 205  Q
    ||||||||||| |||||||| || ||||||   |||  |||||||||||||| ||| ||  || |||||||||||| ||||||||||||| ||||||    
T  28776859 ttggataaacaacttatttgcagcttatagcctaagcacttatcatgataagtgcttatgtataagctatttttattgaaaaagataaaataaagtt 28776955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 244 - 376
Target Start/End: Original strand, 40426789 - 40426921
Alignment:
Q  244 ttggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaata 343  Q
    |||||| ||||| ||||||||||| ||||| |||   ||||| || |||||||||||||||| ||  | |||||  |||||  ||||| || ||||| ||    
T  40426789 ttggagaacttacgaaaataagcttaaaaaagcttatgaaaaatggcataagctgttttcataagcacccccaaacagtctcacaaaatttatgtcatta 40426888  T
Q  344 gataaactcaaatgagtcaatccaaacaggccc 376  Q
    ||||| ||||||| |||||| | ||||||||||    
T  40426889 gataagctcaaataagtcaaccaaaacaggccc 40426921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 3735197 - 3735131
Alignment:
Q  251 acttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    ||||||||| ||||||||||||| |||   |||||||| |||||||||||||||| |||||| ||||    
T  3735197 acttatgaagataagctgaaaaaagcttttgaaaattgtcataagctgttttcatcagttctaccaa 3735131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 10898644 - 10898791
Alignment:
Q  406 caaaattgattctatagcggtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattct-agttgaagctaga 504  Q
    |||||||||||||| ||| || ||||| | | | ||| ||||||||||| || | |  |||||||||||||| ||||||||||||| | ||||||  |||    
T  10898644 caaaattgattctagagctgtcgaattaattttgacatgtttggttgctctcgagtaaaattgattttgcctctagaattgattctaacttgaagtaaga 10898743  T
Q  505 aattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||| ||| | |||| ||  ||||||||||| |||| ||||||| |||||    
T  10898744 aattggagttattgaatc--taattgatttttacacacaaatttattgtt 10898791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 466 - 508
Target Start/End: Original strand, 14299723 - 14299765
Alignment:
Q  466 ttgattttgcctttagaattgattctagttgaagctagaaatt 508  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  14299723 ttgattttgcctatagaattgattttagttgaagctagaaatt 14299765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 19460572 - 19460466
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    |||||||||||||||||||| || |||||| | || ||||||||||||||||| || ||  || | |||||| ||||  |||| ||  || |||||||||    
T  19460572 ttggataaacagcttatttgcagcttatagcacaaatgcttatcatgataagcacttatgtataaactatttctatatcaaaacattgaataaagttaaa 19460473  T
Q  209 ttgtttt 215  Q
    |||||||    
T  19460472 ttgtttt 19460466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 35299872 - 35299922
Alignment:
Q  327 caaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggccct 377  Q
    |||||||  ||||||||||||| ||||||| ||||||||||||||||||||    
T  35299872 caaaactcatgtcaatagataagctcaaataagtcaatccaaacaggccct 35299922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 378
Target Start/End: Complemental strand, 3932733 - 3932588
Alignment:
Q  233 tataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaac 332  Q
    ||||||||||| ||||| ||||| |||||||||||| |||| |||   |||||||  |||||||||||||    |||| || |||  |||||  |||| |    
T  3932733 tataagctagactggagaacttacgaaaataagctgtaaaaagcttatgaaaattatcataagctgtttttgcaagttttctcaaacagtctcacaaagc 3932634  T
Q  333 ttgtgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    || |||   ||||||| ||||||| ||||||||||||||| |||||    
T  3932633 ttatgttgttagataagctcaaattagtcaatccaaacagtcccta 3932588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 4014579 - 4014442
Alignment:
Q  140 agaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttttcgca-----tacaagttgtgttta 234  Q
    ||||| ||| ||||||||||||||  ||  || |||||||| ||||| ||||||||||| ||||||| |||||||| | |      | ||| ||| || |    
T  4014579 agaagcgctcatcatgataagcgcctatgtataagctatttctatagcaaaagataaaataaagttagattgtttttggaaaaatgataagctgttttca 4014480  T
Q  235 taagctagattggagtacttatgaaaataagctgaaaa 272  Q
    |||||||  |||||| ||||||||||||||||||||||    
T  4014479 taagctatcttggagaacttatgaaaataagctgaaaa 4014442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 36639916 - 36640001
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    |||||||||||||||  | ||| ||||||| |||||||| ||||||  ||||| | |||||| ||||| |||| ||||||||||||    
T  36639916 gaattgattttgcctccaaaatagattctacttgaagctggaaattgtagcttctaattctagaattgttttttacactcaaattt 36640001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 42569131 - 42569058
Alignment:
Q  144 gtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttttcg 217  Q
    ||||||||||||||||||||| ||  |  |||||||| ||||| ||||||||||| |||||  |||||||||||    
T  42569131 gtgcttatcatgataagcgcttatgaaaaagctatttctatagcaaaagataaaataaagtctaattgttttcg 42569058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 572 - 632
Target Start/End: Complemental strand, 5465458 - 5465398
Alignment:
Q  572 aaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaatt 632  Q
    |||||||| ||| ||| | ||||||||| ||||| ||| ||||||||||||||||||||||    
T  5465458 aaacataaatcatttttcattcaattcacttttatctaaaatcaattttacaaaatcaatt 5465398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 7674571 - 7674639
Alignment:
Q  148 ttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttttc 216  Q
    |||||||||||||| || ||| || |||||||| ||||  ||||||||||| ||| |||||||||||||    
T  7674571 ttatcatgataagcacttatatataagctatttctataccaaaagataaaataaatttaaattgttttc 7674639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 14932240 - 14932280
Alignment:
Q  175 ctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  14932240 ctatttttatagcaaaagataaaataaagttaaattgtttt 14932280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 463 - 503
Target Start/End: Original strand, 29922035 - 29922075
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctag 503  Q
    ||||||||||||| | |||||||||||||||||||||||||    
T  29922035 gaattgattttgcttgtagaattgattctagttgaagctag 29922075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 35445997 - 35446045
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||| |||||||||||||| ||| ||||||| ||||||||||||||||    
T  35445997 tacataagctatttttatagcaaatgataaaataaagttaaattgtttt 35446045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 465841 - 465944
Alignment:
Q  112 gataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattg 211  Q
    |||||||| |||||||| ||||||||  | |||  | | ||||||||||| || ||| || |||||||| |||   ||||||||||| ||||||||||||    
T  465841 gataaacaacttatttgcagtttataacataagctcatttcatgataagcacttatatataagctatttctatgacaaaagataaaataaagttaaattg 465940  T
Q  212 tttt 215  Q
    ||||    
T  465941 tttt 465944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 649
Target Start/End: Original strand, 707644 - 707699
Alignment:
Q  594 aattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||||||||||| | |||||||| ||||| |||||||||||  ||||||||||||    
T  707644 aattcatttttagttggaatcaatcttacataatcaattcacgcaaaatcaatttt 707699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 602 - 649
Target Start/End: Complemental strand, 4848111 - 4848064
Alignment:
Q  602 tttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    |||||||||||||||| |||||| || |||||||| ||||||||||||    
T  4848111 tttagctagaatcaatcttacaacattaattcactcaaaatcaatttt 4848064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 648
Target Start/End: Complemental strand, 4975147 - 4975053
Alignment:
Q  553 tttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaattt 648  Q
    |||| |||| |||||||  ||||||||  || ||| | ||||||| | |||||||||||||||| |||| |||||||||||||| ||||| |||||    
T  4975147 ttttcatatgaatgtatcaaaacataaagcattttgctttcaatttaattttagctagaatcaa-tttataaaatcaattcactgaaaattaattt 4975053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 648
Target Start/End: Complemental strand, 6095338 - 6095243
Alignment:
Q  553 tttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaattt 648  Q
    |||||| |||||| ||| ||||||||| ||| ||| |  |||| ||||| ||| |||||||||||||||  ||||||||| ||| ||||| |||||    
T  6095338 tttttacataaatatattcaaacataaatcatttttcaatcaactcattattatctagaatcaattttatcaaatcaatttactcaaaattaattt 6095243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 9107054 - 9107097
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaatt 210  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||    
T  9107054 tacataagctatttttaaagaaaaagataaaataaagttaaatt 9107097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 649
Target Start/End: Original strand, 14671104 - 14671198
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||| || |||| || ||||||||| | |||| || ||||||||| ||||||| | ||||||||| |||||||||||||| | ||||||| ||||    
T  14671104 ttttacatgaatgcatccaaacataaat-acttcacattcaattcacttttagccataatcaatttcacaaaatcaattcattcaaaatcattttt 14671198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 339 - 374
Target Start/End: Original strand, 29336749 - 29336784
Alignment:
Q  339 caatagataaactcaaatgagtcaatccaaacaggc 374  Q
    |||||||||||||||||||| |||||||||||||||    
T  29336749 caatagataaactcaaatgattcaatccaaacaggc 29336784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 636
Target Start/End: Complemental strand, 35139010 - 35138947
Alignment:
Q  573 aacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcact 636  Q
    ||||||| ||| ||||||||||| ||| ||||||  |||||||| |||||| ||||||||||||    
T  35139010 aacataaatcattttaccttcaactcaattttagacagaatcaagtttacataatcaattcact 35138947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 507
Target Start/End: Complemental strand, 35139136 - 35139093
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaat 507  Q
    |||||||||||||| ||||||||||| || ||||||||||||||    
T  35139136 aattgattttgcctctagaattgattttacttgaagctagaaat 35139093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 444 - 535
Target Start/End: Complemental strand, 43310665 - 43310574
Alignment:
Q  444 gtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    ||||||||| |||| | | ||||||||||| | |||||||||| |  || |||||| ||||||||  ||||||||||| || ||||||||||    
T  43310665 gtttggttgttttcgagtagaattgattttacttttagaattgttgttatttgaagatagaaattgtagcttttgattatagaattgatttt 43310574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 554 - 636
Target Start/End: Complemental strand, 117502 - 117420
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcact 636  Q
    ||||| ||| |||||| ||||||| | ||| ||||||||||| ||| || |||  ||||||||| ||||| ||||||||||||    
T  117502 ttttacatagatgtatccaaacatgaatcattttaccttcaactcacttctagtcagaatcaatattacataatcaattcact 117420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 611 - 649
Target Start/End: Original strand, 2124244 - 2124282
Alignment:
Q  611 aatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  2124244 aatcaattttacaaaatcaattctcttaaaatcaatttt 2124282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 37112380 - 37112338
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    |||||||| || || ||||||||||||||||||||||||||||    
T  37112380 agctatttctacagcaaaagataaaacaaagttaaattgtttt 37112338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 39247984 - 39248090
Alignment:
Q  110 tggataaacagcttatttgtag-tttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    ||||||||||||||||||| || ||||||| | || ||||||| |||||||||||| ||  |  |||||||| ||||| |||   ||||| ||| |||||    
T  39247984 tggataaacagcttatttgcagctttatagcataattgcttatgatgataagcgcttatgtaaaagctatttctatagcaaatactaaaataaatttaaa 39248083  T
Q  209 ttgtttt 215  Q
    |||||||    
T  39248084 ttgtttt 39248090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 43300881 - 43300935
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgct 277  Q
    ||||||| ||| |||||||  |||||| ||||||||||||||||||||| |||||    
T  43300881 aagttgtttttgtaagctatcttggagaacttatgaaaataagctgaaacatgct 43300935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 463 - 519
Target Start/End: Original strand, 7667588 - 7667645
Alignment:
Q  463 gaattgattttgcctttagaattgattct-agttgaagctagaaattagagcttttga 519  Q
    ||||||| |||||||| |||||||||||| | |||||||||||| || ||||||||||    
T  7667588 gaattgactttgccttcagaattgattctaacttgaagctagaatttggagcttttga 7667645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 482 - 551
Target Start/End: Complemental strand, 18585394 - 18585325
Alignment:
Q  482 aattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgtt 551  Q
    |||||||| || || |||||| |||||| ||||||||| |||| |||| ||||||| | |||||||||||    
T  18585394 aattgattttacttcaagctaaaaattaaagcttttgaatctaaaatttattttaataatcaaatttgtt 18585325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 463 - 535
Target Start/End: Original strand, 33608482 - 33608555
Alignment:
Q  463 gaattgattttgcctttagaattgattct-agttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    |||||| ||||||||| |||||||||||| | |||||||||||| || ||| |||| |||||| ||| ||||||    
T  33608482 gaattggttttgccttgagaattgattctaacttgaagctagaagttggagtttttcattctagaatggatttt 33608555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 35445843 - 35445778
Alignment:
Q  291 ataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaat 356  Q
    ||||||||||||||| | ||||  ||| ||||||  |||||||| ||||| |||||||||||||||    
T  35445843 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaat 35445778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 36927744 - 36927785
Alignment:
Q  494 ttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    |||||||||||| ||||||||||| |||||| ||||||||||    
T  36927744 ttgaagctagaatttagagcttttaattctaaaattgatttt 36927785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 342 - 375
Target Start/End: Complemental strand, 40335821 - 40335788
Alignment:
Q  342 tagataaactcaaatgagtcaatccaaacaggcc 375  Q
    ||||||||||||||| ||||||||||||||||||    
T  40335821 tagataaactcaaataagtcaatccaaacaggcc 40335788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 4e-22; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 464 - 554
Target Start/End: Complemental strand, 10325043 - 10324953
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||| ||||||||| ||||||||| |||| |||||| ||||||||  ||||||||||||||||||||||||| |||||||||||| |||||    
T  10325043 aattaattttgcctctagaattgagtctacttgaagatagaaattgtagcttttgattctataattgatttttacactcaaatttattgtt 10324953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 223 - 365
Target Start/End: Original strand, 49938750 - 49938892
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagt 322  Q
    ||||||| ||||||||||| ||| ||| ||||||||||||||| ||||||| |||   |||||||| |||||||||||||||| |||||||||||  | |    
T  49938750 aagttgtttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcataagttctcccaaacaat 49938849  T
Q  323 cttgcaaaacttgtgtcaatagataaactcaaatgagtcaatc 365  Q
    ||  |||||||| || ||  | |||||||||||| ||||||||    
T  49938850 ctcacaaaacttatgccacgatataaactcaaataagtcaatc 49938892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 486 - 647
Target Start/End: Original strand, 3515820 - 3515979
Alignment:
Q  486 gattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtttttatataaatgtatacaaacataattcact 585  Q
    ||||||| |||||||||||||||  ||||||| |||||| |||||||||| ||||||||| || |  ||   |  ||||||||| |||||| || |||||    
T  3515820 gattctacttgaagctagaaattgtagcttttcattctagaattgatttttacactcaaaattatcattc--aactaaatgtatccaaacacaaatcact 3515917  T
Q  586 ttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    | |||||||| ||| ||||  | ||||||||||||||| |||||||||||| |||| |||||    
T  3515918 tcaccttcaactcaattttcaccagaatcaattttacataatcaattcactcaaaaccaatt 3515979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 109 - 215
Target Start/End: Original strand, 30581686 - 30581792
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    |||||||||||| ||||||| || |||||| | |||| ||| |||||||||||  | |||||| |||||||||||||||||| ||| ||| |||||||||    
T  30581686 ttggataaacagtttatttgcagcttatagaacaagtacttttcatgataagcagttatacataagctatttttatagaaaacgatgaaataaagttaaa 30581785  T
Q  209 ttgtttt 215  Q
    |||||||    
T  30581786 ttgtttt 30581792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 223 - 372
Target Start/End: Complemental strand, 3234082 - 3233933
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagt 322  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||  ||||||  ||   ||||| ||  ||||| ||||||||| ||||||||| |  |||    
T  3234082 aagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttgttttcataagttctccctaacagt 3233983  T
Q  323 cttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacag 372  Q
    ||  ||||||||  | || ||||||| ||||||| |||||||||||||||    
T  3233982 ctcacaaaacttacggcactagataagctcaaataagtcaatccaaacag 3233933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 231 - 375
Target Start/End: Original strand, 2295107 - 2295251
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaa 330  Q
    ||||||||||| ||  ||| |||| |||||||||| |||| |  |||   |||||||| |||||||||||||||| |||||||||||  |||||  ||||    
T  2295107 tttataagctatatcagagaacttgtgaaaataagttgaatagagcttatgaaaattgtcataagctgttttcataagttctcccaaacagtctcacaaa 2295206  T
Q  331 acttgtgtcaatagataaactcaaatgagtcaatccaaacaggcc 375  Q
    |||| || || ||||||| ||||||| || |||| ||||||||||    
T  2295207 acttatgccagtagataagctcaaataagccaattcaaacaggcc 2295251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 440 - 544
Target Start/End: Original strand, 6021760 - 6021864
Alignment:
Q  440 acaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaaca 539  Q
    ||||||||| ||| |||| | | ||||||||||||||| |||||| ||||||| |||||||||| |  |  |||||||||||||||||| |||||| |||    
T  6021760 acaagtttgattgatttcaagtagaattgattttgcctctagaatcgattctacttgaagctaggatatgtagcttttgattctataatagatttttaca 6021859  T
Q  540 ctcaa 544  Q
    |||||    
T  6021860 ctcaa 6021864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 167 - 310
Target Start/End: Complemental strand, 37631687 - 37631539
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattgttttcgc-----atacaagttgtgtttataagctagattggagtacttatgaaaa 261  Q
    ||||| |||||| |||||||| ||||||||||  ||| ||||||||||| |      |||  || ||| ||| ||||||| ||||||| |||||||||||    
T  37631687 tacataagctatctttatagagaaagataaaatgaagctaaattgtttttgtgtatgatattagctgtttttgtaagctatattggagaacttatgaaaa 37631588  T
Q  262 taagctgaaaaatgctcgagaaaattgacataagctgttttcatgagtt 310  Q
    |||||||||||| ||| | |||||||| || ||||||||||||| ||||    
T  37631587 taagctgaaaaaagcttgtgaaaattgtcagaagctgttttcataagtt 37631539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 445 - 548
Target Start/End: Complemental strand, 28084012 - 28083909
Alignment:
Q  445 tttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaa 544  Q
    |||||||| |||| | | |||||||||||| |||   ||||||||||| |||||||||||| ||  ||||||||||||||||||| ||||| |||| |||    
T  28084012 tttggttgttttcgagtagaattgattttgtcttcgtaattgattctacttgaagctagaatttgtagcttttgattctataattaatttttacacacaa 28083913  T
Q  545 attt 548  Q
    ||||    
T  28083912 attt 28083909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 297
Target Start/End: Original strand, 47432038 - 47432172
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattgttttcgca-----tacaagttgtgtttataagctagattggagtacttatgaaaa 261  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||| | |     || ||| ||| |||||||| || |||| || | |||||||||    
T  47432038 tacataagctatttttatagaaaaagataaaataaagttaaattgtttttgaatatgctataaggtgt-tttataagttatattgaagaatttatgaaaa 47432136  T
Q  262 taagctgaaaaatgctcgagaaaattgacataagct 297  Q
    |||||||||||| ||| | |||||||  ||||||||    
T  47432137 taagctgaaaaaagcttgtgaaaattaccataagct 47432172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 6556892 - 6556946
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgc 163  Q
    ||||||||||||||| |||||||||||||| | ||||||||||||||||||||||    
T  6556892 ttggataaacagcttctttgtagtttatagcacaagtgcttatcatgataagcgc 6556946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 9572282 - 9572192
Alignment:
Q  121 cttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattg 211  Q
    |||||||| || |||||| | |||||| ||||||||| |||||| ||  ||||||||||| ||||| ||||||||||| ||||||||||||    
T  9572282 cttatttgcagcttatagcacaagtgcctatcatgatcagcgctaatgtattagctatttctatagcaaaagataaaataaagttaaattg 9572192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 51929598 - 51929512
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    ||||||| ||| ||||||| ||||||| ||||||| ||||||| |||   |||||||| |||||||||||||||||| |||||||||    
T  51929598 tttataaactatattggagaacttatggaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcatgaattctcccaa 51929512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 444 - 541
Target Start/End: Complemental strand, 47892513 - 47892416
Alignment:
Q  444 gtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacact 541  Q
    |||||||||||||  | | ||||||||||| |   ||||| |||||||| || ||||||||||||  |||||||||||||| ||||||||||||||||    
T  47892513 gtttggttgcttttgagtagaattgatttttcacctagaactgattctacttaaagctagaaattgaagcttttgattctagaattgattttaacact 47892416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 482 - 554
Target Start/End: Complemental strand, 20026251 - 20026179
Alignment:
Q  482 aattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    ||||||||||| |||||||||||||||  ||||||| | |||| ||||||||| ||||||||||||| |||||    
T  20026251 aattgattctacttgaagctagaaattcaagcttttaactctagaattgatttgaacactcaaatttattgtt 20026179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 494 - 645
Target Start/End: Original strand, 33693031 - 33693172
Alignment:
Q  494 ttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtttttatataaatgtatacaaacataattcactttaccttc 593  Q
    |||||||||||||||  ||||||||||||||||||||||||| ||||||||||           | || ||||||| ||||||||| ||||||||| |||    
T  33693031 ttgaagctagaaattgtagcttttgattctataattgatttttacactcaaatg----------acatgaatgtatccaaacataaatcactttacgttc 33693120  T
Q  594 aattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaa 645  Q
    || ||  ||||| |  ||| |||||||| | |||||||||||| ||||||||    
T  33693121 aactcgcttttaaccggaaacaattttatagaatcaattcacttaaaatcaa 33693172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 5894349 - 5894294
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgct 164  Q
    |||||||||||||||||||| || |||||| | |||||||||||||||||||||||    
T  5894349 ttggataaacagcttatttgaagcttatagcacaagtgcttatcatgataagcgct 5894294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 554 - 649
Target Start/End: Complemental strand, 11817323 - 11817228
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||| || ||||||| |||| | || ||| |||| |||||| ||  |||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  11817323 ttttacattaatgtattcaaataaaaatcattttatcttcaactcgcttttagttagaatcaattttacaaaatcaattcactcaaactcaatttt 11817228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 371
Target Start/End: Complemental strand, 27146434 - 27146174
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaa 208  Q
    ||||||||| |||||||||| || |||||| | |||| | |||||||||||||| | ||  || || ||||| || || ||||||||||| ||| |||||    
T  27146434 ttggataaatagcttatttgcagcttatagcataagtacatatcatgataagcgtttatgtataaggtatttctacagcaaaagataaaataaatttaaa 27146335  T
Q  209 ttgttttcgcatacaagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgag 308  Q
    ||  ||||| |||  |||| | ||| ||| |||  ||| || ||||| |||| |||| ||||||  |||   ||| | || |||||| ||||| | | ||    
T  27146334 ttagtttcgtata--agttatttttgtaaactatcttgaagaacttacgaaagtaagttgaaaacagcttatgaacaatgtcataagttgtttccttaag 27146237  T
Q  309 ttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaaca 371  Q
    |||| ||||  |||||  |||||||| || |||||||||| ||||||| ||||||||||||||    
T  27146236 ttcttccaacaagtctcacaaaacttatgccaatagataagctcaaatcagtcaatccaaaca 27146174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 356
Target Start/End: Original strand, 29904707 - 29904887
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgttttcgcatacaagttgtgtttataagctagattggagtacttatgaaaataagctgaaaa 272  Q
    |||||||||||||| ||||||||||| ||| ||||| ||||| |   |  |||||   ||||||| ||| |||  || ||||||||||||||| ||||||    
T  29904707 agctatttttatagcaaaagataaaataaatttaaaatgtttgc---tgtaagttaattttataaactatattatagaacttatgaaaataaggtgaaaa 29904803  T
Q  273 atgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaat 356  Q
    | |||   |||||||| ||||||||||||| || ||||||| |||  |||||  |||||||| ||  | ||||||| |||||||    
T  29904804 aagcttttgaaaattgccataagctgtttttataagttctctcaaacagtctcacaaaacttatgcaagtagataagctcaaat 29904887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 647
Target Start/End: Original strand, 13344837 - 13344913
Alignment:
Q  571 caaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||||||| ||||||||| ||||| ||| ||||| | | |||||||| ||||||||||||||| | ||||||||||    
T  13344837 caaacataaatcactttacgttcaactcacttttaaccaaaatcaattctacaaaatcaattcaatcaaaatcaatt 13344913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 231 - 375
Target Start/End: Complemental strand, 14576712 - 14576569
Alignment:
Q  231 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggagtcttgcaaa 330  Q
    ||||||||||| ||| ||| |||| |||||||||||||||||| |||   |||||||| |||||||||||||||  |||| ||||||  |||    ||||    
T  14576712 tttataagctatattagagaactt-tgaaaataagctgaaaaaagcttttgaaaattgtcataagctgttttcacaagttgtcccaaacagtgccacaaa 14576614  T
Q  331 acttgtgtcaatagataaactcaaatgagtcaatccaaacaggcc 375  Q
    | ||  | || ||||||| ||||||| || |||||||||||||||    
T  14576613 atttaagccagtagataagctcaaataagccaatccaaacaggcc 14576569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 15477578 - 15477658
Alignment:
Q  233 tataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctc 313  Q
    |||||| || ||| ||| ||||||||| ||||||||||||| |||   |||||||| |||||||||||||||| |||||||    
T  15477578 tataagttatattagagaacttatgaatataagctgaaaaaagcttttgaaaattgtcataagctgttttcataagttctc 15477658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 17603451 - 17603359
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctccc 315  Q
    ||||||| ||||||||||| ||||||| |||| |||||||||| || |||| | |   |||||||| |||||||||||||| | |||||||||    
T  17603451 aagttgtttttataagctatattggagaacttctgaaaataagttgtaaaaagtttatgaaaattgtcataagctgttttcgtaagttctccc 17603359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 272
Target Start/End: Original strand, 15784257 - 15784381
Alignment:
Q  147 cttatcatgataagcgctcatacattagctatttttatag-aaaaagataaaacaaagttaaattgttttcgcatacaagttgtgtttataagctagatt 245  Q
    ||||| |||||||||||| ||  || |||||||| || || |||||| ||||| ||||||||||||||||||  || ||| ||  |||||||||||  ||    
T  15784257 cttattatgataagcgcttatgtataagctatttctaaagtaaaaaggtaaaataaagttaaattgttttcg--tataagctggttttataagctatctt 15784354  T
Q  246 ggagtacttatgaaaataagctgaaaa 272  Q
    |||| |||| |||||||||||| ||||    
T  15784355 ggagaacttgtgaaaataagctaaaaa 15784381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 479 - 554
Target Start/End: Complemental strand, 28287426 - 28287351
Alignment:
Q  479 tagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||||||| ||||| ||||||| || | ||  ||||||||||| || ||||||||||||||||||||||| |||||    
T  28287426 tagaattggttctacttgaagcaaggatttgtagcttttgattttagaattgattttaacactcaaatttattgtt 28287351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 33541904 - 33541849
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgct 164  Q
    ||||||||||| |||||||| ||||||||| | ||||| |||||||||||||||||    
T  33541904 ttggataaacaacttatttgcagtttatagcacaagtgtttatcatgataagcgct 33541849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 290 - 377
Target Start/End: Original strand, 38001665 - 38001752
Alignment:
Q  290 cataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggccct 377  Q
    |||||||||||||||| |||||||||||  |||||  |||||||| ||||| | ||||||||||||| ||   |||||| ||||||||    
T  38001665 cataagctgttttcataagttctcccaaacagtctcacaaaacttatgtcagttgataaactcaaataagcttatccaagcaggccct 38001752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 47499029 - 47498974
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcgct 164  Q
    ||||||||||| |||||||| || |||||| | |||||||||||||||||||||||    
T  47499029 ttggataaacaacttatttgcagcttatagcacaagtgcttatcatgataagcgct 47498974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 51688579 - 51688630
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataag 160  Q
    ||||||||||| |||||||| || |||||||| |||||||||||||||||||    
T  51688579 ttggataaacaacttatttgcagcttatagtacaagtgcttatcatgataag 51688630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 317
Target Start/End: Original strand, 473167 - 473260
Alignment:
Q  223 aagttgtgtttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    ||||||| |||||||| |  ||||||| ||||||||||||||| ||||||| |||   ||||||||  ||||||| ||||||| |||||||||||    
T  473167 aagttgtttttataagttctattggagaacttatgaaaataagttgaaaaaagcttatgaaaattg-tataagcttttttcataagttctcccaa 473260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 464 - 554
Target Start/End: Complemental strand, 7790747 - 7790657
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    ||||||| ||| ||||||||||||||||| |||||| ||  | ||  || ||| |||||||||||||||||| |||| ||||||| |||||    
T  7790747 aattgatattgtctttagaattgattctacttgaagttatgatttgtagatttagattctataattgatttttacacacaaatttattgtt 7790657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 611 - 649
Target Start/End: Complemental strand, 22548248 - 22548210
Alignment:
Q  611 aatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  22548248 aatcaattttacaaaatcaattcacttaaaatcaatttt 22548210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 410 - 548
Target Start/End: Original strand, 24587835 - 24587976
Alignment:
Q  410 attgattctatagcggtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagct-agaaatt 508  Q
    |||||||||| ||  |||||||||| | | ||| ||||||||||| |  | | ||||||| |||| |   |||| |||||||| |||||| | ||| |||    
T  24587835 attgattctagaggtgtagaattgattgtgacatgtttggttgctcttgagtagaattgactttgacgccagaactgattctacttgaagtttagatatt 24587934  T
Q  509 agagcttttgattct--ataattgattttaacactcaaattt 548  Q
     ||||||||||||||  |||||||||||||||||||||||||    
T  24587935 ggagcttttgattctctataattgattttaacactcaaattt 24587976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 293 - 371
Target Start/End: Complemental strand, 37617462 - 37617384
Alignment:
Q  293 aagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaaca 371  Q
    ||||||||||||| | ||||| |||  |||||  ||||||||  | |||||||||||||||||| ||||||||||||||    
T  37617462 aagctgttttcataaattctcgcaaacagtctcacaaaacttacggcaatagataaactcaaataagtcaatccaaaca 37617384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 609 - 647
Target Start/End: Original strand, 47899387 - 47899425
Alignment:
Q  609 agaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  47899387 agaatcaattttacaaaatcaattcactcaaaatcaatt 47899425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 647
Target Start/End: Original strand, 7524192 - 7524285
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||| |||||||| | |||||| || |||||||||||| |  ||| |||||| |||||||||||||| | ||||| |||||  ||||||||||    
T  7524192 ttttacataaatgtgtccaaacacaaatcactttaccttgagctcacttttagttagaatcaattttatagaatcagttcacccaaaatcaatt 7524285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 521
Target Start/End: Original strand, 10325076 - 10325133
Alignment:
Q  464 aattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgatt 521  Q
    |||||||||| |||| ||||||| |||||||||||| |||||||| |||| |||||||    
T  10325076 aattgatttttccttcagaattgtttctagttgaaggtagaaattggagcatttgatt 10325133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 548
Target Start/End: Original strand, 11049245 - 11049314
Alignment:
Q  479 tagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    |||||| ||||||| |||||||||| | ||  |||||||||||||| |||||||||| |||| |||||||    
T  11049245 tagaatcgattctacttgaagctaggatttgtagcttttgattctaaaattgatttttacacacaaattt 11049314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 15477443 - 15477496
Alignment:
Q  109 ttggataaacagcttatttgtagtttatagtagaagtgcttatcatgataagcg 162  Q
    ||||||||| ||||||||||||| |||||||  ||||||| |||||||||||||    
T  15477443 ttggataaagagcttatttgtagcttatagtgcaagtgctaatcatgataagcg 15477496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 631
Target Start/End: Complemental strand, 15515075 - 15514998
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaat 631  Q
    ||||| || ||| ||| ||| ||||| || |||||||||||| ||| ||||||||||| ||||||| |||||||||||    
T  15515075 ttttacatgaatttatccaatcataaatcgctttaccttcaactcacttttagctagactcaatttcacaaaatcaat 15514998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 549
Target Start/End: Original strand, 29759632 - 29759677
Alignment:
Q  504 aaattagagcttttgattctataattgattttaacactcaaatttg 549  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||    
T  29759632 aaattggagcttctgattctataattgatttttacactcaaatttg 29759677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 535
Target Start/End: Complemental strand, 48549099 - 48549046
Alignment:
Q  482 aattgattctagttgaagctagaaattagagcttttgattctataattgatttt 535  Q
    ||||||||||| |||||||||||||||  ||||| |||||||| ||||||||||    
T  48549099 aattgattctacttgaagctagaaattgtagcttctgattctagaattgatttt 48549046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 30582076 - 30582028
Alignment:
Q  167 tacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 215  Q
    ||||| || ||||||||||||||||||||||| |||||||| |||||||    
T  30582076 tacataaggtatttttatagaaaaagataaaataaagttaacttgtttt 30582028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 376
Target Start/End: Original strand, 33186318 - 33186462
Alignment:
Q  233 tataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaa-ttgacataagctgttttcatgagttctcccaaggagtcttgcaaaa 331  Q
    ||||| ||| ||| ||| ||||||  ||||||||||||||| |||   ||||| ||| ||||| | |||||||| |||||||| |   |||||  |||||    
T  33186318 tataatctatattagagaacttatataaataagctgaaaaaagcttttgaaaaattgtcataaccagttttcataagttctcctagacagtctcacaaaa 33186417  T
Q  332 cttgtgtcaatagataaactcaaatgagtcaatccaaacaggccc 376  Q
    ||| || |||  ||||||||||||| || ||||||||||||||||    
T  33186418 cttatgccaacggataaactcaaataagccaatccaaacaggccc 33186462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 649
Target Start/End: Original strand, 38512453 - 38512493
Alignment:
Q  609 agaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  38512453 agaattaattttacaaaatcaattcacttaaaatcaatttt 38512493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 633
Target Start/End: Original strand, 4347033 - 4347100
Alignment:
Q  566 gtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattc 633  Q
    |||| ||||||||| ||||||||| ||||| ||| ||||| | | |||||||| ||||||||||||||    
T  4347033 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattctacaaaatcaattc 4347100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 15942250 - 15942305
Alignment:
Q  142 aagtgcttatcatgataagcgctcatacattagctatttttatagaaaaagataaa 197  Q
    ||||||||||||||||||| ||| ||  || |||||||| ||||||||||||||||    
T  15942250 aagtgcttatcatgataagtgcttatgtataagctatttatatagaaaaagataaa 15942305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 23544786 - 23544719
Alignment:
Q  149 tatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttttc 216  Q
    |||||||||||||||| ||  || |||||||| ||| |||||||||||||  |||| |||||||||||    
T  23544786 tatcatgataagcgcttatgtataagctatttctatggaaaaagataaaattaagtcaaattgttttc 23544719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 632
Target Start/End: Complemental strand, 28465002 - 28464923
Alignment:
Q  553 tttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaatt 632  Q
    |||||| ||||||||| |||||||||| |||  |||| ||||| ||  |||||| ||||||||| ||| |||||||||||    
T  28465002 tttttacataaatgtacacaaacataaatcatgttacattcaactcgcttttagatagaatcaaattttcaaaatcaatt 28464923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 641
Target Start/End: Original strand, 35961447 - 35961534
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaa 641  Q
    ||||| || |||||||| |||||||| ||| ||||||||||| ||| |||||||   |||| |||||||| |||||||| ||| ||||    
T  35961447 ttttacatgaatgtatagaaacataaatcattttaccttcaactcacttttagccgtaatctattttacagaatcaatttactcaaaa 35961534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 652
Target Start/End: Original strand, 49537195 - 49537246
Alignment:
Q  601 ttttagctagaatcaattttacaaaatcaattcactaaaaatcaattttaaa 652  Q
    |||||||||||| ||| ||||||||||||||||| | ||| |||||||||||    
T  49537195 ttttagctagaaacaactttacaaaatcaattcattcaaagtcaattttaaa 49537246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 371
Target Start/End: Complemental strand, 50644253 - 50644174
Alignment:
Q  292 taagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaaca 371  Q
    |||| ||||||||| |||||||||||  |||||  |||||| | ||| | ||||||| ||||||| ||||||||||||||    
T  50644253 taagttgttttcataagttctcccaaacagtctcacaaaacatatgttagtagataagctcaaataagtcaatccaaaca 50644174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 512 - 554
Target Start/End: Complemental strand, 213594 - 213552
Alignment:
Q  512 gcttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    ||||||||||||| |||||||||| | ||||||||||||||||    
T  213594 gcttttgattctagaattgatttttaaactcaaatttgttgtt 213552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 479 - 548
Target Start/End: Original strand, 6574175 - 6574245
Alignment:
Q  479 tagaattgattctag-ttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    ||||||||||||||  || |||||| |||||||||||||||||| || |||| ||||| | ||||||||||    
T  6574175 tagaattgattctaactttaagctaaaaattagagcttttgattgtagaattaattttcagactcaaattt 6574245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 336 - 378
Target Start/End: Original strand, 26184859 - 26184901
Alignment:
Q  336 tgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    |||||||||| |||||||||| |||||||||||||||| ||||    
T  26184859 tgtcaatagaaaaactcaaataagtcaatccaaacaggtccta 26184901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 470 - 536
Target Start/End: Original strand, 29964085 - 29964151
Alignment:
Q  470 ttttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgatttta 536  Q
    |||| |||||| ||||||||||| ||||||||| ||||||||| | || |||||| |||| ||||||    
T  29964085 tttttcctttataattgattctacttgaagctataaattagagttattaattctaaaatttatttta 29964151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 482 - 548
Target Start/End: Complemental strand, 34387780 - 34387714
Alignment:
Q  482 aattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaattt 548  Q
    |||||||| || |||||| | | ||||  ||||||||||||||||||||||||| |||| |||||||    
T  34387780 aattgattttacttgaagttgggaattgcagcttttgattctataattgattttcacacacaaattt 34387714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 463 - 532
Target Start/End: Original strand, 3016142 - 3016210
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgat 532  Q
    ||||||||||||| |||| ||||||||||| |||||  ||||| ||  |||||||||||||| |||||||    
T  3016142 gaattgattttgc-tttataattgattctacttgaacttagaatttgtagcttttgattctagaattgat 3016210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 513 - 554
Target Start/End: Original strand, 17284125 - 17284166
Alignment:
Q  513 cttttgattctataattgattttaacactcaaatttgttgtt 554  Q
    |||||||||||| |||||||||| |||||||||||| |||||    
T  17284125 cttttgattctaaaattgatttttacactcaaatttattgtt 17284166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 553 - 626
Target Start/End: Original strand, 26382761 - 26382834
Alignment:
Q  553 tttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaa 626  Q
    |||||||||||||||||  |||||||| ||| ||||| ||  |||||||||||  || ||||||||||| ||||    
T  26382761 tttttatataaatgtatttaaacataaatcagtttacattttattcatttttaattataatcaattttataaaa 26382834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 425 - 535
Target Start/End: Complemental strand, 31362345 - 31362239
Alignment:
Q  425 gtagaattgagtataacaagtttggttgctttccacttgaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattcta 524  Q
    ||||||| || | ||||| ||||||||||||||   | |||||||||||||||  | |||||||||    ||||| ||||| ||  ||||||||||||||    
T  31362345 gtagaatcgactctaacatgtttggttgctttcatgtagaattgattttgcctccataattgattc----tgaagttagaatttgtagcttttgattcta 31362250  T
Q  525 taattgatttt 535  Q
     ||||||||||    
T  31362249 gaattgatttt 31362239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 554 - 647
Target Start/End: Complemental strand, 32370037 - 32369944
Alignment:
Q  554 ttttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatt 647  Q
    ||||| || ||||||| |||||| || ||||||||   ||||| |||| ||||  | |||||||| |||| |||||||||||| ||||||||||    
T  32370037 ttttacatgaatgtatccaaacacaaatcactttataatcaatccattattagtcaaaatcaattctacacaatcaattcactcaaaatcaatt 32369944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 37473427 - 37473500
Alignment:
Q  244 ttggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaa 317  Q
    |||||| |||||||||||||||||| |||| |||   ||||| || |||||| ||||||||  |||||||||||    
T  37473427 ttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagttgttttcaaaagttctcccaa 37473500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 38247396 - 38247485
Alignment:
Q  289 acataagctgttttcatgagttctcccaaggagtcttgcaaaacttgtgtcaatagataaactcaaatgagtcaatccaaacaggcccta 378  Q
    ||||||||||||||||| |||||||||||  |||    |||||||| || || |||||||  |||||| |  ||||||||||||||||||    
T  38247396 acataagctgttttcataagttctcccaaacagtgacacaaaacttatgccagtagataagttcaaataacccaatccaaacaggcccta 38247485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 463 - 630
Target Start/End: Complemental strand, 14219 - 14044
Alignment:
Q  463 gaattgattttgcctttagaattgattctagttgaagctagaaattagagcttttgattctataattgattttaacactcaaatttgttgtt-------- 554  Q
    |||||||||||| |   ||||||||||||| |||||||||| |||   ||||| |||||||| |||||||||| |||||||||||| || ||            
T  14219 gaattgattttgtcacaagaattgattctacttgaagctagcaatct-agcttatgattctagaattgatttttacactcaaatttatttttcaactcac 14121  T
Q  555 -tttatataaatgtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaa 630  Q
     || | || ||||||| ||||||||| ||||||||||||||| ||| || |||| ||||||||||||||||||||||    
T  14120 tttcacatgaatgtatccaaacataaatcactttaccttcaactcaattgtagcaagaatcaattttacaaaatcaa 14044  T

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Target: scaffold0024 (Bit Score: 47; Significance: 3e-17; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 21426 - 21311
Alignment:
Q  147 cttatcatgataagcgctcatacattagctatttttatagaaaaagataaaacaaagttaaattgttttcgcatacaagttgtgtttataagctagattg 246  Q
    |||| |||||||||| || ||  || |||||||||||||| ||||||||||| ||||||||||||||||||  || ||| ||| || |||||||| ||||    
T  21426 cttaccatgataagcacttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcg--tataagctgttttcataagctatattg 21329  T
Q  247 gagtacttatgaaaataa 264  Q
    ||| | ||||||||||||    
T  21328 gagaaattatgaaaataa 21311  T

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Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 58885 - 58929
Alignment:
Q  173 agctatttttatagaaaaagataaaacaaagttaaattgttttcg 217  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||    
T  58885 agctatttttataggaaaagttaaaataaagttaaattgttttcg 58929  T

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Target: scaffold0221 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 22245 - 22312
Alignment:
Q  234 ataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttt 301  Q
    ||||||||  |||||  ||||||||||||||||||||||| |||   |||||||| ||||||||||||    
T  22245 ataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgttt 22312  T

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Target: scaffold0172 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 649
Target Start/End: Complemental strand, 15323 - 15240
Alignment:
Q  566 gtatacaaacataattcactttaccttcaattcatttttagctagaatcaattttacaaaatcaattcactaaaaatcaatttt 649  Q
    |||| ||||||||| ||||||||  ||||| ||| ||||| | | ||||||||| |||||||||||||  | ||||||||||||    
T  15323 gtatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatttgacaaaatcaattctatcaaaatcaatttt 15240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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