View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18721_low_5 (Length: 598)

Name: NF18721_low_5
Description: NF18721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18721_low_5
NF18721_low_5
[»] chr6 (7 HSPs)
chr6 (16-586)||(33311920-33312490)
chr6 (277-586)||(12433818-12434131)
chr6 (359-585)||(16988-17214)
chr6 (359-585)||(3548654-3548880)
chr6 (347-581)||(18308442-18308676)
chr6 (149-226)||(12431430-12431507)
chr6 (350-585)||(13734353-13734589)
[»] chr5 (7 HSPs)
chr5 (187-586)||(13644686-13645104)
chr5 (312-586)||(35339723-35339997)
chr5 (424-585)||(5782955-5783116)
chr5 (360-585)||(19070437-19070662)
chr5 (108-165)||(13645108-13645165)
chr5 (374-426)||(21900075-21900127)
chr5 (527-584)||(21899917-21899974)
[»] chr4 (13 HSPs)
chr4 (309-586)||(15443314-15443591)
chr4 (415-586)||(17938991-17939166)
chr4 (295-518)||(11486442-11486663)
chr4 (393-585)||(7184961-7185153)
chr4 (187-277)||(15443623-15443714)
chr4 (344-586)||(8668854-8669096)
chr4 (369-585)||(33042391-33042606)
chr4 (350-585)||(10697472-10697706)
chr4 (108-165)||(15443718-15443775)
chr4 (452-585)||(10674552-10674684)
chr4 (452-585)||(10888192-10888324)
chr4 (452-585)||(10911241-10911373)
chr4 (346-426)||(1930602-1930682)
[»] scaffold0044 (2 HSPs)
scaffold0044 (187-553)||(93463-93830)
scaffold0044 (108-277)||(93402-93554)
[»] scaffold0238 (1 HSPs)
scaffold0238 (359-585)||(1709-1935)
[»] chr2 (5 HSPs)
chr2 (359-585)||(3867708-3867934)
chr2 (344-585)||(20380579-20380820)
chr2 (341-440)||(25976977-25977076)
chr2 (341-451)||(20387982-20388092)
chr2 (545-586)||(5114821-5114862)
[»] chr3 (1 HSPs)
chr3 (421-585)||(20972136-20972300)
[»] chr1 (3 HSPs)
chr1 (295-564)||(30730278-30730547)
chr1 (374-584)||(21797096-21797306)
chr1 (344-586)||(13311313-13311555)
[»] chr8 (3 HSPs)
chr8 (359-585)||(21591057-21591283)
chr8 (359-585)||(14411234-14411460)
chr8 (359-585)||(23599811-23600038)
[»] scaffold0363 (1 HSPs)
scaffold0363 (359-585)||(7251-7477)
[»] chr7 (4 HSPs)
chr7 (359-585)||(3729507-3729733)
chr7 (359-563)||(17181302-17181506)
chr7 (341-440)||(20942774-20942873)
chr7 (16-47)||(22982651-22982682)
[»] scaffold0063 (1 HSPs)
scaffold0063 (350-585)||(59244-59479)
[»] scaffold0416 (1 HSPs)
scaffold0416 (374-570)||(8906-9102)
[»] scaffold0012 (2 HSPs)
scaffold0012 (527-584)||(61553-61610)
scaffold0012 (374-459)||(61678-61763)
[»] scaffold0490 (1 HSPs)
scaffold0490 (359-411)||(11723-11775)
[»] scaffold0125 (3 HSPs)
scaffold0125 (359-411)||(31801-31853)
scaffold0125 (359-411)||(41112-41164)
scaffold0125 (512-570)||(31642-31700)
[»] scaffold0093 (1 HSPs)
scaffold0093 (374-426)||(10035-10087)


Alignment Details
Target: chr6 (Bit Score: 555; Significance: 0; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 555; E-Value: 0
Query Start/End: Original strand, 16 - 586
Target Start/End: Original strand, 33311920 - 33312490
Alignment:
Q  16 caatttggttggtgggattaatcaatcaattggtccatgggttgaaattgaagttaatcttcacgcaaaaatcttttgagctaccgaaaagttttcatca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33311920 caatttggttggtgggattaatcaatcaattggtccatgggttgaaattgaagttaatcttcacgcaaaaatcttttgagctaccgaaaagttttcatca 33312019  T
Q  116 attatccatatgctggttgttgctttctgcgcatcaactgtttgtggaattgcctctgttttgcatatctacgcaagcagcccccatggcctacgagtgc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  33312020 attatccatatgctggttgttgctttctgcgcatcaactgtttgtggaattgcctctgctttgcatatctacgcaagcagcccccatggcctatgagtgc 33312119  T
Q  216 caatggccatgtgtgttgaagctgcacttacgtcagctatggtgaaccaatctgttccagcaataactgaaaaacctgtttcaccaccaacaatgtcctt 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33312120 caatggccatgtgtgttgaagctgcacttacgtcagctatggtgaaccaatctgttccagcaataactgaaaaacctgtttcaccaccaacaatgtcctt 33312219  T
Q  316 tgcagcagctcttgcgaggaagacggtaattgatgacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaa 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33312220 tgcagcagctcttgcgaggaagacggtaattgatgacaaacccttcacttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggaggaa 33312319  T
Q  416 taccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaa 515  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33312320 taccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaa 33312419  T
Q  516 ttgataagacttggaagacaaaggcaggatggaaaatggtgcctcttggcaagggttattatgactttcat 586  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33312420 ttgataagacttggaagacaaaggcaggatggaaaatggtgcctcttggcaagggttattatgactttcat 33312490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 277 - 586
Target Start/End: Original strand, 12433818 - 12434131
Alignment:
Q  277 aataactgaaaaacctgtttcaccaccaacaatgtcc----tttgcagcagctcttgcgaggaagacggtaattgatgacaaacccttcccttctccatg 372  Q
    ||||| |||| ||||||||||||||||| |||| |||    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  12433818 aataattgaacaacctgtttcaccaccaccaatttcccttatttgcagcagctcttgcggggaagacagtaattgatgacaaacccttaccttctccatg 12433917  T
Q  373 cattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctcttaac 472  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12433918 cattaaaggtggtgcgttgagcatcaaaatatgtcaggaggaataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttgactcttaac 12434017  T
Q  473 aaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcctcttggcaagggtt 572  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||    
T  12434018 aaaggagacaaaccttattctgcacgtgatcgcagtattaaaattgataagacttagaagaaaaaggcatgatggaaaatggtgcctcttggcaagggtt 12434117  T
Q  573 attatgactttcat 586  Q
    ||||||||||||||    
T  12434118 attatgactttcat 12434131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 359 - 585
Target Start/End: Complemental strand, 17214 - 16988
Alignment:
Q  359 ttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctc 458  Q
    ||||||||||| ||||| ||||||||||| || ||||||||||| ||||| ||  |||||| ||||||| | ||||||||||  || |||||||||||||    
T  17214 ttcccttctccttgcatcaaaggtgatgctttaagcatcaaaatctgtcaagatgaataccataagggactcgaagattgtcgaaaagtgttaagggctc 17115  T
Q  459 ggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcc 558  Q
    | ||| |||||||| |||| ||||||||||| | ||||| || ||| |||||||||||||  || | ||||||||||| |||| | |||||||||||||     
T  17114 gattgactcttaacgaaggggacaaaccttactctgcacatgttctcagtattaaaattggaaaaatttggaagacaacggcaagctggaaaatggtgct 17015  T
Q  559 tcttggcaagggttattatgactttca 585  Q
    |||||| ||| | ||||||||||||||    
T  17014 tcttggtaagtggtattatgactttca 16988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 359 - 585
Target Start/End: Complemental strand, 3548880 - 3548654
Alignment:
Q  359 ttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctc 458  Q
    ||||||||||| ||||| ||||| ||||| || ||||||||||| ||||| ||  |||||| |||| || | ||||||||||  ||  ||||||||||||    
T  3548880 ttcccttctccttgcatcaaaggcgatgctttaagcatcaaaatctgtcaagatgaataccataagtgactggaagattgtcgaaaaatgttaagggctc 3548781  T
Q  459 ggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcc 558  Q
    | ||| ||| ||||||| | ||||||||||| |||||||||||||| | ||||||||||   || | ||||||||||| |||| | | ||||||||||||    
T  3548780 gattgactcctaacaaaagggacaaaccttactttgcacgtgatctcaatattaaaattagaaaaatttggaagacaacggcaagctagaaaatggtgcc 3548681  T
Q  559 tcttggcaagggttattatgactttca 585  Q
    |||| | ||||| ||||||||||||||    
T  3548680 tcttagtaaggggtattatgactttca 3548654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 347 - 581
Target Start/End: Complemental strand, 18308676 - 18308442
Alignment:
Q  347 gatgacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaagg 446  Q
    ||||||||||| || |||||||| ||||| ||||||||||| || |||||||| || || || ||  ||||| |||||||| | |||||||||   ||||    
T  18308676 gatgacaaaccttttccttctccttgcatcaaaggtgatgctttaagcatcaagatttgccaagatgaatacagtaagggactggaagattgtagaaagg 18308577  T
Q  447 tgttaagggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatg 546  Q
     |||||||||||| ||| ||||||||||||| ||||||||||| | |||||||||||| ||| |||||||||  || | |||||  |||  ||| || |     
T  18308576 cgttaagggctcgcttgactcttaacaaaggggacaaaccttactctgcacgtgatctcagtgttaaaattgggaaaatttggagaacagcggctggttc 18308477  T
Q  547 gaaaatggtgcctcttggcaagggttattatgact 581  Q
    |||||||||||||||||| ||||| ||||||||||    
T  18308476 gaaaatggtgcctcttggtaaggggtattatgact 18308442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 12431430 - 12431507
Alignment:
Q  149 tcaactgtttgtggaattgcctctgttttgcatatctacgcaagcagcccccatggcctacgagtgccaatggccatg 226  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12431430 tcaactgtttgtggaatcgcctctgttttgcatatctacgcaagcagcccccatggtctacgagtgccaatggccatg 12431507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 350 - 585
Target Start/End: Original strand, 13734353 - 13734589
Alignment:
Q  350 gacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgt 449  Q
    |||||||| | |||| ||||||  || || |||||||| |||||||||||||||||||||||| | || | ||  ||| || |||| ||  | || | ||    
T  13734353 gacaaaccatgccctactccatatatcaagggtgatgctttgagcatcaaaatatgtcaggaggagtatcatagaggactacaagactgcaataatgagt 13734452  T
Q  450 taagggctcggttggctcttaacaaa-ggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatgga 548  Q
    | ||||| || ||| | ||||||||| ||| ||||||| |||||||||||| |||| || || || ||||  |||   ||||| |||  |||||||||||    
T  13734453 tgagggcgcgtttgacccttaacaaaaggatacaaaccatattttgcacgtcatctaagcatcaatattggaaagctatggaaaacatcggcaggatgga 13734552  T
Q  549 aaatggtgcctcttggcaagggttattatgactttca 585  Q
    |||||||| |||| ||||| |  ||||||||||||||    
T  13734553 aaatggtgactctaggcaaagactattatgactttca 13734589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 187 - 586
Target Start/End: Complemental strand, 13645104 - 13644686
Alignment:
Q  187 cgcaagcagcccccatggcctacgagtgccaatggccatgtgtgt-tgaagctgcacttacgtcagctatggtgaaccaatctgttccagcaataac--- 282  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | | |||| |||| |||||||||||||||| |||||||||||||||||  |||       
T  13645104 cgcaagcagcccccatggcctacgagtgccaatggccatatgtttctaaagccgcacctacgtcagctatggtgcaccaatctgttccagcatcaacaat 13645005  T
Q  283 --------------tgaaa-aacctgtttcaccaccaacaatgtcctttgcagcagctcttgcgaggaagacggtaattgatgacaaacccttcccttct 367  Q
                  ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  13645004 ggacttggcaataatgaaacaacctgtttcagcaccaacaatgtcctttgcagcagctcttgcggggaagacagtaattgatgacaaacccttcccttct 13644905  T
Q  368 ccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctc 467  Q
    |||  ||||||||||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  13644904 ccaatcattaaaggtggtgcgtttagcatcaaaatctgtcaggaggaataccgtaagggagtagaagattgtcggaaggtgttaagggctcggttgactc 13644805  T
Q  468 ttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcctcttggcaa 567  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  13644804 ttaacaaaggagacaaaccttattctgcatgtgatctcagtattaaaattgataagacttggaagacaatggcagaatggaaaatggtgcctcttggcaa 13644705  T
Q  568 gggttattatgactttcat 586  Q
    ||| |||||||||||||||    
T  13644704 ggggtattatgactttcat 13644686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 312 - 586
Target Start/End: Original strand, 35339723 - 35339997
Alignment:
Q  312 cctttgcagcagctcttgcgaggaagacggtaattgatgacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcagga 411  Q
    |||||||| ||||||||||| |||  ||||| |  ||||||||||| || |||||||| ||||| ||||  ||||| || |||||||| || || || ||    
T  35339723 cctttgcaacagctcttgcggggactacggttacggatgacaaaccttttccttctccttgcatcaaagccgatgctttaagcatcaagatttgccaaga 35339822  T
Q  412 gaaataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtatt 511  Q
      ||||| |||||||| | |||||||||   |||| |||||||||||| ||| ||||||| ||||| ||||| ||||| | |||||||||||| ||| ||    
T  35339823 tgaatacagtaagggactggaagattgtagaaaggcgttaagggctcgcttgactcttaataaaggggacaagccttactctgcacgtgatctcagtgtt 35339922  T
Q  512 aaaattgataagacttggaagacaaaggcaggatggaaaatggtgcctcttggcaagggttattatgactttcat 586  Q
    |||||||  || | |||||  |||  |||||| ||||||||||||||||| || ||||| |||||||||||||||    
T  35339923 aaaattgggaaaatttggagaacagcggcaggttggaaaatggtgcctctcggtaaggggtattatgactttcat 35339997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 424 - 585
Target Start/End: Complemental strand, 5783116 - 5782955
Alignment:
Q  424 gggagtagaagattgtcagaaggtgttaagggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataag 523  Q
    |||||||||||| ||  |||| |||||||||||||| ||| |||||||||| ||||| || || ||||||||||||||| | ||||  ||||| |  |||    
T  5783116 gggagtagaagaatgcaagaatgtgttaagggctcgcttgactcttaacaagggagataagccgtattttgcacgtgatttaagtaccaaaataggaaag 5783017  T
Q  524 acttggaagacaaaggcaggatggaaaatggtgcctcttggcaagggttattatgactttca 585  Q
      |||||| |||  ||| |  ||||||||||||||||||||||| ||||| |||||||||||    
T  5783016 cattggaaaacatcggcggcctggaaaatggtgcctcttggcaaaggttactatgactttca 5782955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 360 - 585
Target Start/End: Complemental strand, 19070662 - 19070437
Alignment:
Q  360 tcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctcg 459  Q
    ||||| |||||||||||||||| || || |||||||||||||| | ||||||  | ||||  |  ||||||||||| ||  |||| | |||||||| |||    
T  19070662 tccctactccatgcattaaaggggaagctttgagcatcaaaatttttcaggacgagtaccacataggagtagaagaatgcaagaatgcgttaaggggtcg 19070563  T
Q  460 gttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcct 559  Q
     ||| |||||||||| || || || || |||| |||||||||| | ||||  ||||| |  |||  |||||| |||  ||| |  |||||||||| ||||    
T  19070562 cttgactcttaacaagggggataagccgtattctgcacgtgatttaagtaccaaaataggaaagcattggaaaacatcggcggcctggaaaatggcgcct 19070463  T
Q  560 cttggcaagggttattatgactttca 585  Q
    |||||||| ||||| |||||||||||    
T  19070462 cttggcaaaggttactatgactttca 19070437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 13645165 - 13645108
Alignment:
Q  108 tttcatcaattatccatatgctggttgttgctttctgcgcatcaactgtttgtggaat 165  Q
    ||||||| ||| |||||||||||||||||||||| ||| || ||||||||||||||||    
T  13645165 tttcatctattctccatatgctggttgttgctttgtgcccaccaactgtttgtggaat 13645108  T

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Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 426
Target Start/End: Complemental strand, 21900127 - 21900075
Alignment:
Q  374 attaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaaggg 426  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||    
T  21900127 attaagggggatgccttgagcatcaaaatatgtcaggaggaataccgtaaggg 21900075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 584
Target Start/End: Complemental strand, 21899974 - 21899917
Alignment:
Q  527 tggaagacaaaggcaggatggaaaatggtgcctcttggcaagggttattatgactttc 584  Q
    |||||||||| ||| || ||||||||||| |||||||| ||||| |||||||| ||||    
T  21899974 tggaagacaatggctggttggaaaatggtacctcttggtaaggggtattatgattttc 21899917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 309 - 586
Target Start/End: Complemental strand, 15443591 - 15443314
Alignment:
Q  309 tgtcctttgcagcagctcttgcgaggaagacggtaattgatgacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtca 408  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  15443591 tgtcctttgcagcagctcttgcggggaagacaataattgatgacaaacccttgccttctccatgcattaaaggtggtgcgttgagcatcaaaatctgtca 15443492  T
Q  409 ggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagt 508  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| |||    
T  15443491 ggaggaataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttgactcttaacaaaggagacaaaccttattctgcgcgtgatctcagt 15443392  T
Q  509 attaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcctcttggcaagggttattatgactttcat 586  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15443391 attaaaattgataagacttggaagacaatggcaggatggaaaatggtgcctcttggcaaggggtattatgactttcat 15443314  T

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Target: chr4; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 415 - 586
Target Start/End: Original strand, 17938991 - 17939166
Alignment:
Q  415 ataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctcttaacaaa----ggagacaaaccttattttgcacgtgatcttagtat 510  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    |||||||||||||||| |||||||||||| |||||    
T  17938991 atactgtaagggagtagaagattgtcagaaggtgttaagggctcggttgactcttaacaaattaaggagacaaaccttattctgcacgtgatctcagtat 17939090  T
Q  511 taaaattgataagacttggaagacaaaggcaggatggaaaatggtgcctcttggcaagggttattatgactttcat 586  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  17939091 taaaattgataagacttggaagacaatggcaggatggaaaatggtgtctcttggcaaggggtattatgactttcat 17939166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 295 - 518
Target Start/End: Complemental strand, 11486663 - 11486442
Alignment:
Q  295 ttcaccaccaacaatgtcctttgcagcagctcttgcgaggaagac-ggtaattgatgacaaacccttcccttctccatgcattaaaggtgatgcgttgag 393  Q
    |||| ||| |||| |||||||||||||||||||||||    |||| || |||||| |||| ||| |  |||||||| ||||||||||| |||||||| ||    
T  11486663 ttcagcacaaacattgtcctttgcagcagctcttgcgg---agacaggaaattgacgacataccttatccttctccgtgcattaaaggagatgcgttaag 11486567  T
Q  394 catcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctcttaacaaaggagacaaaccttatttt 493  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||||||  ||||||||||||||| || ||| ||||||||||||| || ||||||| || |    
T  11486566 catcaaaatctgtcaggaggaataccggaagggagtagaagattgtaggaaggtgttaagggcgcgtttgactcttaacaaaggggataaacctttttct 11486467  T
Q  494 gcacgtgatcttagtattaaaattg 518  Q
    || |||||||| |||  ||||||||    
T  11486466 gcgcgtgatctcagtgctaaaattg 11486442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 393 - 585
Target Start/End: Original strand, 7184961 - 7185153
Alignment:
Q  393 gcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctcttaacaaaggagacaaaccttattt 492  Q
    |||||||||| | ||| ||  |||||| ||||||| | |||||||||| ||| |||||||||||||  ||| |||| |||||||| ||||||||||| |     
T  7184961 gcatcaaaatctatcaagatgaataccataagggactggaagattgtcggaaagtgttaagggctcaattgactctcaacaaaggggacaaaccttactc 7185060  T
Q  493 tgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcctcttggcaagggttattatgactttca 585  Q
    ||||||||| || |||||||||||||  || | ||||||||||| |||| | |||||||||||||||||||| ||||||||||||||||||||    
T  7185061 tgcacgtgaactcagtattaaaattggaaaaatttggaagacaacggcaagctggaaaatggtgcctcttggtaagggttattatgactttca 7185153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 187 - 277
Target Start/End: Complemental strand, 15443714 - 15443623
Alignment:
Q  187 cgcaagcagcccccatggcctacgagtgccaatggccatgtgtgt-tgaagctgcacttacgtcagctatggtgaaccaatctgttccagca 277  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||||||||||    
T  15443714 cgcaagcagcccccatggcctacgagtgccaatggccatgtgtttctgaagctgcacctacgtcagctatggtgcaccaatctgttccagca 15443623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 344 - 586
Target Start/End: Complemental strand, 8669096 - 8668854
Alignment:
Q  344 attgatgacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcaga 443  Q
    |||||||||| |||  | ||| ||||||||||||| || ||||| |||||||||||||| || |||||  | |||| || |||||| ||||| ||  |||    
T  8669096 attgatgacagacctctacctactccatgcattaagggcgatgctttgagcatcaaaatctgccaggaagagtaccatatgggagtggaagaatgcaaga 8668997  T
Q  444 aggtgttaagggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcagg 543  Q
    ||| |||||||||||| ||| |||||||||| ||||| || || || | |||||||||  | || | |||||| || |||  |||||| |||  ||| ||    
T  8668996 aggcgttaagggctcgtttgactcttaacaagggagataagccatactctgcacgtgacttaagcaataaaatcgaaaagctttggaaaacatcggcggg 8668897  T
Q  544 atggaaaatggtgcctcttggcaagggttattatgactttcat 586  Q
     ||||||||||||||||| ||||| || || ||||| ||||||    
T  8668896 ctggaaaatggtgcctctcggcaaaggatactatgattttcat 8668854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 369 - 585
Target Start/End: Complemental strand, 33042606 - 33042391
Alignment:
Q  369 catgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctct 468  Q
    |||||||||| || ||||| |||||||||||||| || ||||| || |||| || ||||||||| || ||  |||| | |||||||||||| ||| ||||    
T  33042606 catgcattaagggggatgctttgagcatcaaaatctgccaggacaagtaccataggggagtagaggaatgcaagaatgcgttaagggctcgattgactct 33042507  T
Q  469 taacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcctcttggcaag 568  Q
    |||| |||| || || || |||| ||||||||| || | ||  ||||| |  |||  |||||| |||  |||  ||||||||||||||||||| |||||     
T  33042506 taac-aaggggataagccgtattctgcacgtgacctaaataccaaaatcggaaagctttggaaaacatcggcgagatggaaaatggtgcctctcggcaaa 33042408  T
Q  569 ggttattatgactttca 585  Q
    ||||| |||||||||||    
T  33042407 ggttactatgactttca 33042391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 350 - 585
Target Start/End: Complemental strand, 10697706 - 10697472
Alignment:
Q  350 gacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgt 449  Q
    |||||||| |||||| | |||||| | || |||||||| |||||||||||||| ||||| ||  | || |  ||||||||||| |||||    || ||||    
T  10697706 gacaaacctttccctacaccatgcctcaagggtgatgctttgagcatcaaaatttgtcacgaagagtatcaaaagggagtagaggattgcacaaatgtgt 10697607  T
Q  450 taagggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaa 549  Q
    | ||||| || ||| |||||||||| ||||| ||||| || ||||||| |||||| || |   ||||||  |||   ||||| || | |||||| |||||    
T  10697606 tgagggcgcgtttgactcttaacaagggagataaaccatactttgcacatgatctaagcaaataaattggaaagctatggaaaac-acggcagggtggaa 10697508  T
Q  550 aatggtgcctcttggcaagggttattatgactttca 585  Q
    |||||||||||| ||||| || ||||||||||||||    
T  10697507 aatggtgcctctaggcaaaggctattatgactttca 10697472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 15443775 - 15443718
Alignment:
Q  108 tttcatcaattatccatatgctggttgttgctttctgcgcatcaactgtttgtggaat 165  Q
    ||||||| ||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  15443775 tttcatctattctccatatgctggttgttgctttctgcccaccaactgtttgtggaat 15443718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 452 - 585
Target Start/End: Original strand, 10674552 - 10674684
Alignment:
Q  452 agggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaa 551  Q
    ||||| || ||| |||||||||| ||||| ||||| || |||||||||||||| || |  |||||||  |||   ||||| |||  |||||| |||||||    
T  10674552 agggcgcgtttgactcttaacaagggagataaaccatactttgcacgtgatctaagcaacaaaattggaaagcaatggaaaacac-ggcagggtggaaaa 10674650  T
Q  552 tggtgcctcttggcaagggttattatgactttca 585  Q
    |||||||||| ||||| || ||||||||||||||    
T  10674651 tggtgcctctaggcaaaggctattatgactttca 10674684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 452 - 585
Target Start/End: Original strand, 10888192 - 10888324
Alignment:
Q  452 agggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaa 551  Q
    ||||| || ||| |||||||||| ||||| ||||| || |||||||||||||| || |  |||||||  |||   ||||| |||  |||||| |||||||    
T  10888192 agggcgcgtttgactcttaacaagggagataaaccatactttgcacgtgatctaagcaacaaaattggaaagcaatggaaaacac-ggcagggtggaaaa 10888290  T
Q  552 tggtgcctcttggcaagggttattatgactttca 585  Q
    |||||||||| ||||| || ||||||||||||||    
T  10888291 tggtgcctctaggcaaaggctattatgactttca 10888324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 452 - 585
Target Start/End: Complemental strand, 10911373 - 10911241
Alignment:
Q  452 agggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaa 551  Q
    ||||| || ||| |||||||||| ||||| ||||| || |||||||||||||| || |  |||||||  |||   ||||| |||  |||||| |||||||    
T  10911373 agggcgcgtttgactcttaacaagggagataaaccatactttgcacgtgatctaagcaacaaaattggaaagcaatggaaaacac-ggcagggtggaaaa 10911275  T
Q  552 tggtgcctcttggcaagggttattatgactttca 585  Q
    |||||||||| ||||| || ||||||||||||||    
T  10911274 tggtgcctctaggcaaaggctattatgactttca 10911241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 426
Target Start/End: Complemental strand, 1930682 - 1930602
Alignment:
Q  346 tgatgacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaaggg 426  Q
    ||||||||  |||||||| || || || ||||| || ||||| |||||||| ||||| ||||||||| |||||||||||||    
T  1930682 tgatgacacgcccttcccctcaccttgtattaagggggatgccttgagcataaaaatttgtcaggaggaataccgtaaggg 1930602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 213; Significance: 1e-116; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 187 - 553
Target Start/End: Original strand, 93463 - 93830
Alignment:
Q  187 cgcaagcagcccccatggcctacgagtgccaatggccatgtgtgt-tgaagctgcacttacgtcagctatggtgaaccaatctgttccagcaataactga 285  Q
    |||||||||||||||||||||| |||||||||||||||||||| | ||||||||||| | |||||||||||||| |||||||||||||||| || | | |    
T  93463 cgcaagcagcccccatggcctaggagtgccaatggccatgtgtttctgaagctgcacctgcgtcagctatggtgcaccaatctgttccagc-atcaatca 93561  T
Q  286 aaaacctgtttcaccacc--aacaat-gtcctttgcagcagctcttgcgaggaagacggtaattgatgacaaacccttcccttctccatgcattaaaggt 382  Q
       || ||   ||  | |  |||||  ||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  93562 tggacttgg--caataacggaacaaccgtcctttgcagcagctcttgcggagaagacagtaattgatgacaaacccttcccttctccatgcattaaaggt 93659  T
Q  383 gatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctcttaacaaaggagaca 482  Q
    | |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  93660 ggtgcgttgagcatcaaaatctgtcaggaggaataccgtaagggagtagaagattgtcggaaggtgttaagggctcggttgactcttaacaaaggagaca 93759  T
Q  483 aaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatg 553  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  93760 aaccttattctgcacgtgatctaagtattaaaattgataagacttggaagacaatggcaggatggaaaatg 93830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 108 - 277
Target Start/End: Original strand, 93402 - 93554
Alignment:
Q  108 tttcatcaattatccatatgctggttgttgctttctgcgcatcaactgtttgtggaattgcctctgttttgcatatctacgcaagcagcccccatggcct 207  Q
    ||||||| ||| |||||||||||||||||||||||||| |  ||||||||||||||                  |||  |||||||||||||||||||||    
T  93402 tttcatctattctccatatgctggttgttgctttctgccctccaactgtttgtgga------------------atcgtcgcaagcagcccccatggcct 93483  T
Q  208 acgagtgccaatggccatgtgtgt-tgaagctgcacttacgtcagctatggtgaaccaatctgttccagca 277  Q
    | |||||||||||||||||||| | ||||||||||| | |||||||||||||| |||||||||||||||||    
T  93484 aggagtgccaatggccatgtgtttctgaagctgcacctgcgtcagctatggtgcaccaatctgttccagca 93554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 103; Significance: 6e-51; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 359 - 585
Target Start/End: Complemental strand, 1935 - 1709
Alignment:
Q  359 ttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctc 458  Q
    ||||||||||| ||||| ||||| ||||| || ||||||||| | ||||| ||  |||||| ||||||| | |||||||||| ||| |||||||||||||    
T  1935 ttcccttctccttgcatcaaaggcgatgctttaagcatcaaattctgtcaagaagaataccataagggactggaagattgtcggaaagtgttaagggctc 1836  T
Q  459 ggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcc 558  Q
     |||| ||||||||||||| |||||||| || | |||| ||||||| |||||||||||||  || | ||||||||||  |||| ||||||||||||||||    
T  1835 agttgactcttaacaaaggggacaaaccctactgtgcatgtgatctcagtattaaaattggaaaaatttggaagacagtggcaagatggaaaatggtgcc 1736  T
Q  559 tcttggcaagggttattatgactttca 585  Q
    |||||| ||||||||||||||||||||    
T  1735 tcttggtaagggttattatgactttca 1709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 3e-46; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 359 - 585
Target Start/End: Original strand, 3867708 - 3867934
Alignment:
Q  359 ttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctc 458  Q
    ||||||||||| ||||| ||||| ||||| || ||||||||||| ||| | ||  |||||| ||||||| | |||||||||| ||| |||||||||||||    
T  3867708 ttcccttctccttgcatcaaaggcgatgctttaagcatcaaaatctgttaagatgaataccataagggattggaagattgtcggaaagtgttaagggctc 3867807  T
Q  459 ggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcc 558  Q
    | ||| ||||||||||||| | ||||||||| | |||||||||||||| |||||| ||||  || | ||||||||||| |||| | | ||||||||||||    
T  3867808 gattgactcttaacaaagggggcaaaccttactctgcacgtgatcttaatattaacattggaaaaatttggaagacaacggcaagctagaaaatggtgcc 3867907  T
Q  559 tcttggcaagggttattatgactttca 585  Q
    |||||| ||||| ||||||||||||||    
T  3867908 tcttggtaaggggtattatgactttca 3867934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 344 - 585
Target Start/End: Original strand, 20380579 - 20380820
Alignment:
Q  344 attgatgacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcaga 443  Q
    |||||||||| ||| ||||||||||| ||||| ||||||||||| || ||||| ||||| ||||||||| | ||||| |||||||| |||||||||  ||    
T  20380579 attgatgacagaccattcccttctccgtgcatcaaaggtgatgctttaagcataaaaatttgtcaggaggagtaccggaagggagtcgaagattgtagga 20380678  T
Q  444 aggtgttaagggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcagg 543  Q
    |||| ||| | || || ||| |||||| ||| |||||||||||    | | | ||||| || ||    ||| |||  |||| ||||||||| | ||||||    
T  20380679 aggttttacgtgcgcgtttgactcttagcaagggagacaaaccactatctacgcgtgacctcagggaaaaagttgggaagatttggaagacgacggcagg 20380778  T
Q  544 atggaaaatggtgcctcttggcaagggttattatgactttca 585  Q
    ||||||||||||||||||  | ||||||| |||||| |||||    
T  20380779 atggaaaatggtgcctctcagtaagggtttttatgattttca 20380820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 440
Target Start/End: Complemental strand, 25977076 - 25976977
Alignment:
Q  341 gtaattgatgacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtc 440  Q
    ||||||||||| | ||| ||||||||||| || || ||||||||||| || ||||| ||||| | ||||||| | ||||| |||||||| ||||||||||    
T  25977076 gtaattgatgaaagacctttcccttctccgtggatcaaaggtgatgctttaagcattaaaatctatcaggaggagtaccggaagggagttgaagattgtc 25976977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 451
Target Start/End: Original strand, 20387982 - 20388092
Alignment:
Q  341 gtaattgatgacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtc 440  Q
    |||||||| || | ||| ||||||||||| ||||| |||| |||||| |  |||||  |||| ||||||||| | ||||| ||||||||||||||||||     
T  20387982 gtaattgacgaaagaccattcccttctccgtgcatcaaagttgatgcttcaagcatacaaatttgtcaggaggagtaccggaagggagtagaagattgta 20388081  T
Q  441 agaaggtgtta 451  Q
     ||||||||||    
T  20388082 ggaaggtgtta 20388092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 545 - 586
Target Start/End: Original strand, 5114821 - 5114862
Alignment:
Q  545 tggaaaatggtgcctcttggcaagggttattatgactttcat 586  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||    
T  5114821 tggaaaatggtgcctctcggcaaaggttactatgactttcat 5114862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 421 - 585
Target Start/End: Complemental strand, 20972300 - 20972136
Alignment:
Q  421 taagggagtagaagattgtcagaaggtgttaagggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgat 520  Q
    ||||||| |||||||||||| ||| |||||||||||||| ||| ||||||||||||| ||||||||||| | |||||||||||| |||||||||||||      
T  20972300 taagggactagaagattgtcggaaagtgttaagggctcgattgactcttaacaaaggggacaaaccttactctgcacgtgatctcagtattaaaattgga 20972201  T
Q  521 aagacttggaagacaaaggcaggatggaaaatggtgcctcttggcaagggttattatgactttca 585  Q
    || | ||||||||||| |||| | |||||||||||||||||||| ||||| ||||||||||||||    
T  20972200 aaaatttggaagacaacggcaagttggaaaatggtgcctcttggtaaggggtattatgactttca 20972136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 3e-43; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 295 - 564
Target Start/End: Original strand, 30730278 - 30730547
Alignment:
Q  295 ttcaccaccaacaatgtcctttgcagcagctcttgcgaggaagacggtaattgatgacaaacccttcccttctccatgcattaaaggtgatgcgttgagc 394  Q
    |||| ||| |||| ||||||||||||||||||||||| |||  | || |||||| || | ||| ||||||||||  ||||||||||| |||||||| |||    
T  30730278 ttcagcacaaacattgtcctttgcagcagctcttgcggggataaaggaaattgacgatagacctttcccttctctgtgcattaaaggagatgcgttaagc 30730377  T
Q  395 atcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctcttaacaaaggagacaaaccttattttg 494  Q
    |||||||| ||||| ||| ||||||  ||||||||||||||||||  |||||| |||| ||  || ||| ||||| ||||||| || ||||||| || ||    
T  30730378 atcaaaatctgtcaagaggaataccagaagggagtagaagattgtaggaaggtcttaaaggtgcgtttgactcttcacaaaggggataaacctttttctg 30730477  T
Q  495 cacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcctcttgg 564  Q
    | |||||||| |||  ||||||||  |||  ||||||||||| || ||| ||||||||||||||||||||    
T  30730478 cgcgtgatctcagtgctaaaattgggaaggtttggaagacaacggtaggctggaaaatggtgcctcttgg 30730547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 374 - 584
Target Start/End: Original strand, 21797096 - 21797306
Alignment:
Q  374 attaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctcttaaca 473  Q
    |||||||| ||||| |||||||||||||| ||||||||| |||||||||||||  | ||||||||| || | |  |||||||||||  || | |||| ||    
T  21797096 attaaaggggatgccttgagcatcaaaatttgtcaggaggaataccgtaagggcttggaagattgtaagcacgctttaagggctcgtctgacccttagca 21797195  T
Q  474 aaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcctcttggcaagggtta 573  Q
    |||| || || || || |  ||| | ||  | |||  ||||||| |||| |  |||||||||| ||| || ||||||||||| |||||||| ||||| ||    
T  21797196 aaggggataagccgtactcagcaagggacttaagttctaaaatttataaaatatggaagacaacggctggttggaaaatggtacctcttggtaaggggta 21797295  T
Q  574 ttatgactttc 584  Q
    |||||| ||||    
T  21797296 ttatgattttc 21797306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 344 - 586
Target Start/End: Complemental strand, 13311555 - 13311313
Alignment:
Q  344 attgatgacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcaga 443  Q
    |||||||||| |||  | ||| |||||||| |||| || ||||| ||||| ||||| || |  |||||  | |||| || ||| ||||| || ||  |||    
T  13311555 attgatgacagacctctacctactccatgctttaagggagatgctttgagtatcaagatcttccaggaagactaccataggggtgtagatgaatgcaaga 13311456  T
Q  444 aggtgttaagggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcagg 543  Q
    | |||||||||||||| ||| |||||||||| ||||| || || || | |||| ||||  | ||   |||||| |  |||| |||||| |||  | | ||    
T  13311455 atgtgttaagggctcgtttgactcttaacaagggagataagccatactctgcatgtgacttgagcgataaaatcggaaagatttggaaaacatcgtctgg 13311356  T
Q  544 atggaaaatggtgcctcttggcaagggttattatgactttcat 586  Q
     ||||||||||||||||| ||||| ||||| ||||||||||||    
T  13311355 ttggaaaatggtgcctctcggcaaaggttactatgactttcat 13311313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 5e-39; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 359 - 585
Target Start/End: Original strand, 21591057 - 21591283
Alignment:
Q  359 ttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctc 458  Q
    |||||| ||||||| || || |||||||| |||||||||||||||||||||||  | || | || |||| |||| |||||  |||| ||||| |||||||    
T  21591057 ttccctactccatgtatcaatggtgatgctttgagcatcaaaatatgtcaggaagagtatcataggggactagaggattgcaagaatgtgttgagggctc 21591156  T
Q  459 ggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcc 558  Q
    | ||| | |||||||||||||||||||| ||||||||||||||||| || |  |||||||  |||   ||||| |||  |||||||||||||||||||||    
T  21591157 gtttgacccttaacaaaggagacaaaccatattttgcacgtgatctaagcaacaaaattggaaaggtatggaaaacatcggcaggatggaaaatggtgcc 21591256  T
Q  559 tcttggcaagggttattatgactttca 585  Q
    ||| ||||| || ||||||||||||||    
T  21591257 tctaggcaaaggctattatgactttca 21591283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 359 - 585
Target Start/End: Original strand, 14411234 - 14411460
Alignment:
Q  359 ttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctc 458  Q
    |||||| ||||||| || || |||||||| |||||||| ||||||||||||||  | || | || |||| |||| |||||  |||| ||||| ||||| |    
T  14411234 ttccctactccatgtatcaagggtgatgctttgagcattaaaatatgtcaggaagagtatcataggggactagaggattgcaagaatgtgttgagggcac 14411333  T
Q  459 ggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcc 558  Q
    | ||| | |||||||||||||||||||| ||||||||||||||||| || |  |||||||  |||   ||||| |||  |||||||||||||||||||||    
T  14411334 gtttgacccttaacaaaggagacaaaccatattttgcacgtgatctaagcaacaaaattggcaaggtatggaaaacatcggcaggatggaaaatggtgcc 14411433  T
Q  559 tcttggcaagggttattatgactttca 585  Q
    ||| ||||| || ||||||||||||||    
T  14411434 tctaggcaaaggctattatgactttca 14411460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 585
Target Start/End: Original strand, 23599811 - 23600038
Alignment:
Q  359 ttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctc 458  Q
    |||||| ||||||| || || ||||||||  |||||||||||||||||| |||  | || | || |||| |||| ||||   || |  |||| ||||| |    
T  23599811 ttccctactccatgaatcaagggtgatgctctgagcatcaaaatatgtcgggaagagtatcatatgggactagaggattacaagtatatgttgagggcgc 23599910  T
Q  459 ggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggc-aggatggaaaatggtgc 557  Q
    | ||| | |||||||||||||||||||| ||||||||||||||||| || |  |||||||  ||    ||||| |||  | | |||||||||||||||||    
T  23599911 gtttgacccttaacaaaggagacaaaccatattttgcacgtgatctaagcaacaaaattggaaacgtatggaaaacatcgacaaggatggaaaatggtgc 23600010  T
Q  558 ctcttggcaagggttattatgactttca 585  Q
    |||| | ||| || ||||||||||||||    
T  23600011 ctctagacaaaggctattatgactttca 23600038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 359 - 585
Target Start/End: Complemental strand, 7477 - 7251
Alignment:
Q  359 ttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctc 458  Q
    |||||| ||||||| || || |||||||| |||||||| ||||||||||||||  | || | || |||| |||| |||||  |||| ||||| ||||| |    
T  7477 ttccctactccatgtatcaagggtgatgctttgagcattaaaatatgtcaggaagagtatcataggggactagaggattgcaagaatgtgttgagggcac 7378  T
Q  459 ggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcc 558  Q
    | ||| | |||||||||||||||||||| ||||||||||||||||| || |  |||||||  |||   ||||| |||  |||||||||||||||||||||    
T  7377 gtttgacccttaacaaaggagacaaaccatattttgcacgtgatctaagcaacaaaattggcaaggtatggaaaacatcggcaggatggaaaatggtgcc 7278  T
Q  559 tcttggcaagggttattatgactttca 585  Q
    ||| ||||| || ||||||||||||||    
T  7277 tctaggcaaaggctattatgactttca 7251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 359 - 585
Target Start/End: Complemental strand, 3729733 - 3729507
Alignment:
Q  359 ttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctc 458  Q
    |||||| || |||| || || |||||||| |||||||||||||||| ||||||  | || | || |||| |||| |||||  |||| ||| | ||||| |    
T  3729733 ttccctacttcatgtatcaagggtgatgctttgagcatcaaaatatatcaggaagagtatcataggggactagaggattgcaagaatgtgctgagggcgc 3729634  T
Q  459 ggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcc 558  Q
    | ||| | |||||||||||||||||||| ||||||||||||||||| || |  |||||||  |||   ||||| |||  |||||||||||||||||||||    
T  3729633 gtttgacccttaacaaaggagacaaaccatattttgcacgtgatctaagcaacaaaattggaaaggtatggaaaacatcggcaggatggaaaatggtgcc 3729534  T
Q  559 tcttggcaagggttattatgactttca 585  Q
    ||| ||||| || ||||||||||||||    
T  3729533 tctaggcaaaggctattatgactttca 3729507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 359 - 563
Target Start/End: Original strand, 17181302 - 17181506
Alignment:
Q  359 ttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctc 458  Q
    |||||| ||||||| || |  |||||||| |||||||||||||||||||||||  | || | || |||| |||| |||||  |||| ||||| ||||| |    
T  17181302 ttccctactccatgtatcaggggtgatgctttgagcatcaaaatatgtcaggaagagtatcataggggactagaggattgcaagaatgtgttgagggcgc 17181401  T
Q  459 ggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcc 558  Q
    | ||| | |||||||||||||||||||| ||||||||||||||||| || |  |||||||  |||   ||||| |||  |||||||||||||||||||||    
T  17181402 gtttgacccttaacaaaggagacaaaccatattttgcacgtgatctaagcaacaaaattggaaaggtatggaaaacatcggcaggatggaaaatggtgcc 17181501  T
Q  559 tcttg 563  Q
    |||||    
T  17181502 tcttg 17181506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 341 - 440
Target Start/End: Complemental strand, 20942873 - 20942774
Alignment:
Q  341 gtaattgatgacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtc 440  Q
    ||||||||||| | ||||||||||||||| ||||| ||||| ||||| || ||||| ||||| ||||||||| | ||||| |||||||| || |||||||    
T  20942873 gtaattgatgaaagacccttcccttctccgtgcatcaaaggagatgctttaagcattaaaatctgtcaggaggagtaccggaagggagttgacgattgtc 20942774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 47
Target Start/End: Complemental strand, 22982682 - 22982651
Alignment:
Q  16 caatttggttggtgggattaatcaatcaattg 47  Q
    ||||||||||||||||||||||||||||||||    
T  22982682 caatttggttggtgggattaatcaatcaattg 22982651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 350 - 585
Target Start/End: Original strand, 59244 - 59479
Alignment:
Q  350 gacaaacccttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgt 449  Q
    ||||||||  ||||| | ||||| || || |||||||| |||||||||||||||||| ||||  |||| | |||||||  ||| |||||  |||| | ||    
T  59244 gacaaacctatccctacaccatgtatcaagggtgatgctttgagcatcaaaatatgttaggaagaatatcataagggaccagaggattgcaagaatgcgt 59343  T
Q  450 taagggctcggttggctcttaacaaaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaa 549  Q
    ||||||| |  ||| | ||||||||| |||| ||||| |||| |||||||||||  || |  |||||||  |||   ||||| |||  |  |||||||||    
T  59344 taagggcgcatttgacccttaacaaaagagataaaccatattctgcacgtgatcaaagcaacaaaattgcaaagctatggaaaacatcgttaggatggaa 59443  T
Q  550 aatggtgcctcttggcaagggttattatgactttca 585  Q
    |||||||||||| ||||| || ||||||||||||||    
T  59444 aatggtgcctctaggcaaaggctattatgactttca 59479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0416 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 570
Target Start/End: Original strand, 8906 - 9102
Alignment:
Q  374 attaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctcggttggctcttaaca 473  Q
    |||||||||||||||||||| || ||||||||||| ||| ||||| ||  ||| || || |||||| |||||| ||||||||| |  ||| ||||||| |    
T  8906 attaaaggtgatgcgttgagtattaaaatatgtcaagaggaatacagtctgggtgttgatgattgtaagaaggcgttaagggcgcacttgactcttaata 9005  T
Q  474 aaggagacaaaccttattttgcacgtgatcttagtattaaaattgataagacttggaagacaaaggcaggatggaaaatggtgcctcttggcaaggg 570  Q
    |||||||||| || | || ||| ||||||||| ||   |||||||     | |||||| |||| ||| || ||||| ||||| ||||||||||||||    
T  9006 aaggagacaagcccttttctgcgcgtgatcttcgttccaaaattggagcaatttggaaaacaacggcgggttggaagatggtacctcttggcaaggg 9102  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 527 - 584
Target Start/End: Complemental strand, 61610 - 61553
Alignment:
Q  527 tggaagacaaaggcaggatggaaaatggtgcctcttggcaagggttattatgactttc 584  Q
    |||||||||| ||| || |||||||||||||||||||| ||||| |||||||| ||||    
T  61610 tggaagacaacggctggttggaaaatggtgcctcttggtaaggggtattatgattttc 61553  T

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Target: scaffold0012; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 374 - 459
Target Start/End: Complemental strand, 61763 - 61678
Alignment:
Q  374 attaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaagggagtagaagattgtcagaaggtgttaagggctcg 459  Q
    |||||||| ||||| ||||| |||||||| ||||||||| |||||||||||||  | ||||||||| || | |  |||||||||||    
T  61763 attaaaggggatgctttgagtatcaaaatttgtcaggaggaataccgtaagggcttggaagattgtaagcacgccttaagggctcg 61678  T

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Target: scaffold0490 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 411
Target Start/End: Original strand, 11723 - 11775
Alignment:
Q  359 ttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcagga 411  Q
    ||||||||||||||||| ||||||||||| || ||||||||||| || |||||    
T  11723 ttcccttctccatgcatcaaaggtgatgctttaagcatcaaaatttgccagga 11775  T

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Target: scaffold0125 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 411
Target Start/End: Complemental strand, 31853 - 31801
Alignment:
Q  359 ttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcagga 411  Q
    ||||||||||| ||||| ||||||||||| || ||||||||||| ||||||||    
T  31853 ttcccttctccgtgcatcaaaggtgatgctttaagcatcaaaatttgtcagga 31801  T

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Target: scaffold0125; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 411
Target Start/End: Complemental strand, 41164 - 41112
Alignment:
Q  359 ttcccttctccatgcattaaaggtgatgcgttgagcatcaaaatatgtcagga 411  Q
    ||||||||||| ||||| ||||||||||| || ||||||||||| ||||||||    
T  41164 ttcccttctccgtgcatcaaaggtgatgctttaagcatcaaaatttgtcagga 41112  T

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Target: scaffold0125; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 512 - 570
Target Start/End: Complemental strand, 31700 - 31642
Alignment:
Q  512 aaaattgataagacttggaagacaaaggcaggatggaaaatggtgcctcttggcaaggg 570  Q
    ||||||| ||||| ||||||||| | |||||||||||||||||| ||||| || |||||    
T  31700 aaaattggtaagatttggaagacgacggcaggatggaaaatggttcctctaggtaaggg 31642  T

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Target: scaffold0093 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 374 - 426
Target Start/End: Original strand, 10035 - 10087
Alignment:
Q  374 attaaaggtgatgcgttgagcatcaaaatatgtcaggagaaataccgtaaggg 426  Q
    |||||||| ||||  |||||||||||||| ||||| ||| |||||||||||||    
T  10035 attaaaggggatgaattgagcatcaaaatttgtcaagaggaataccgtaaggg 10087  T

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