View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18724_low_15 (Length: 279)
Name: NF18724_low_15
Description: NF18724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18724_low_15 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 17 - 201
Target Start/End: Original strand, 29606641 - 29606825
Alignment:
| Q |
17 |
caaaggttacaccggcattaagcccaaaaaccccatcccctaaaattcaaccaccaccacatccacccaaaaaagcacctgtttctctaccaccattatc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29606641 |
caaaggttacaccggcattaagcccaaaaaccccatcccctaaaattcaaccaccaccacatccacccaaaaaagcacctgtttctctaccaccattatc |
29606740 |
T |
|
| Q |
117 |
tataccacctgtttcacttccaccattaccattaccaccagcttctaaaccaccaaaggtatccccagcacctgcaaaggttcca |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29606741 |
tataccacctgtttcacttccaccattaccattaccaccagcttctaaaccaccaaaggtatccccagcacctgcaaaggttcca |
29606825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University