View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18725_low_1 (Length: 716)
Name: NF18725_low_1
Description: NF18725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18725_low_1 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 681; Significance: 0; HSPs: 32)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 681; E-Value: 0
Query Start/End: Original strand, 18 - 702
Target Start/End: Original strand, 22358442 - 22359126
Alignment:
| Q |
18 |
cctgctaccaaaaaatcaatcaatttgtctcttgtcttatcaaatcctacaacatcagcttcaaccatgtaaagtggagcgtctcgaaggttctgaaata |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22358442 |
cctgctaccaaaaaatcaatcaatttgtctcttgtcttatcaaatcctacaacatcagcttcaaccatgtaaagtggagcgtctcgaaggttctgaaata |
22358541 |
T |
|
| Q |
118 |
atgaggcgtttctgtttgttgcataactagttgatgctttatccgaagaagattggatatagaagccatgatctttttcagttcttgtatcatttatttc |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22358542 |
atgaggcgtttctgtttgttgcataactagttgatgctttatccgaagaagattggatatagaagccatgatctttttcagttcttgtatcatttatttc |
22358641 |
T |
|
| Q |
218 |
acttattcgggatttgatgttctgaatcttgtaagctatttggagacggaaagccatagttttgacacagtttgtaacaccagcagcacatccaggatca |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22358642 |
acttattcgggatttgatgttctgaatcttgtaagctatttggagacggaaagccatagttttgacacagtttgtaacaccagcagcacatccaggatca |
22358741 |
T |
|
| Q |
318 |
ggagcatgttgttcctcaagaaagatataatcatcaatgacatcttctatgtgaaaagatgcttctatcagctgcttgatcatgtctttgattttcttgt |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22358742 |
ggagcatgttgttcctcaagaaagatataatcatcaatgacatcttctatgtgaaaagatgcttctatcagctgcttgatcatgtctttgattttcttgt |
22358841 |
T |
|
| Q |
418 |
cttctacatcatcagcccttttatccgcatcgttgatgaagacttctattatttctagttcctcttgcaattcttcaatttcttttgggacacccctaat |
517 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22358842 |
cttctacatcatcagcccttttatccgcatcgttgatgaagacttctattctttctagttcctcttgcaattcttcaatttcttttgggacacccctaat |
22358941 |
T |
|
| Q |
518 |
catgttgaatgcttccttcaagaatggaagcaaatgatcacgggctagtggaagcaaatgatcacgagcgcaggcaagtgcatctttacagtcacacatt |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22358942 |
catgttgaatgcttccttcaagaatggaagcaaatgatcacgggctagtggaagcaaatgatcacgagcgcaggcaagtgcatctttacagtcacacatt |
22359041 |
T |
|
| Q |
618 |
ttgttgtatatttgatttcaatttgctaatattgtgagtgagattgaactgtgaggaaaaagctcatagtccttcaagattatat |
702 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22359042 |
ttgttgtatatttgatttcaatttgctaatattgtgagtgagattgaactgtgaggaaaaagctcatagtccttcaagattatat |
22359126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 568; E-Value: 0
Query Start/End: Original strand, 21 - 691
Target Start/End: Original strand, 22635946 - 22636619
Alignment:
| Q |
21 |
gctaccaaaaaatcaatcaatttgtctcttgtcttatcaaatcctacaacatcagcttcaaccatgtaaagtggagcgtctcgaaggttctgaaataatg |
120 |
Q |
| |
|
|||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
22635946 |
gctaccaaaagatcaatcaattcgtctcttggcttatcaaatcctacaacatcagcttcaaccatgtaaagtggagcgtctcgaaggttctgaaatagtg |
22636045 |
T |
|
| Q |
121 |
aggcgtttctgtttgttgcataactagttgatgctttatccgaagaagattggatatagaagccatgatctttttcagttcttgtatcatttatttcact |
220 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22636046 |
aggcgtttctgtttgttgcagaactagttgatgctttatccgatgaagattggatatagaagccatgatctttttcagttcttgtatcatttatttcact |
22636145 |
T |
|
| Q |
221 |
tattcgggatttgatgttctgaatcttgtaagctatttggagacggaaagccatagttttgacacagtttgtaacaccagcagcacatccaggatcagga |
320 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||| |
|
|
| T |
22636146 |
tattcgggatttgatgttctgaatcttgtaagctatttggagacggaaagccatagttttgacacagtttgtagcaacagcagcacaaccaggatcagga |
22636245 |
T |
|
| Q |
321 |
gcatgttgttcctcaagaaagatataatcatcaatgacatcttctatgtgaaaagatgcttctatcagctgcttgatcatgtctttgattttcttgtctt |
420 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22636246 |
gcatgttgttcctcaagaaagatataatcatcaatgacatcttcaatgtgaaaagatgcttctatcagctgcttgatcatgtctttgattttcttgtctt |
22636345 |
T |
|
| Q |
421 |
ctacatcatcagcccttttatccgcatcgttgatgaagacttctattatttctagttcctcttgcaattcttcaatttcttttgggacacccctaatcat |
520 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| ||| |||| ||||| |||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22636346 |
ctacatcatcagcccttctatccgcatcgttgatgaagacttcaattctttcaagttcatctttcaattctgcaatttcttttgggacacccctaatcat |
22636445 |
T |
|
| Q |
521 |
gttgaatgcttccttcaagaatggaagcaaatgatcacgggctagtggaagcaaatgatcacgagcgcaggcaagtgcatctttacagtcacacattttg |
620 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22636446 |
gttgaatgcttccttcaagaatggaagcaaatgatcacgggctagtggaagcaaatgatcacgagcgcaggcaagtgcatctttacagtcacacattttg |
22636545 |
T |
|
| Q |
621 |
ttgtatatttgatttcaatttg---ctaatattgtgagtgagattgaactgtgaggaaaaagctcatagtcctt |
691 |
Q |
| |
|
||||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
22636546 |
ttgtatatttgattttaatttgctactagtattgtgagtgagattgaatggtgaggaaaaagctattagtcctt |
22636619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 22 - 702
Target Start/End: Original strand, 22368356 - 22369028
Alignment:
| Q |
22 |
ctaccaaaaaatcaatcaatttgtctcttgtcttatcaaatcctacaacatcagcttcaaccatgtaaagtggagcgtctcgaaggttctgaaataatga |
121 |
Q |
| |
|
||||||| |||||||||||||||||||||| | |||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22368356 |
ctaccaacaaatcaatcaatttgtctcttgacacatcaaatcctaccgcatcagcatcatccatgtaaagtggagcatctcgaaggttctgaaataatga |
22368455 |
T |
|
| Q |
122 |
ggcgtttctgtttgttgcataactagttgatgctttatccgaagaagattggatatagaagccatgatctttttcagttcttgtatcatttatttcactt |
221 |
Q |
| |
|
||| ||||||||||||||| ||||| |||||||||||||| ||||||||||||| | |||| ||||||| |||||| ||||| || |||||||| || |
|
|
| T |
22368456 |
ggcatttctgtttgttgcagaactacttgatgctttatccaaagaagattggatgtcgaagtcatgatccttttca---cttgtttcttttatttcccta |
22368552 |
T |
|
| Q |
222 |
attcgggatttgatgttctgaatcttgtaagctatttggagacggaaagccatagttttgacacagtttgtaacaccagcagcacatccaggatcaggag |
321 |
Q |
| |
|
||| |||| ||||||||||||||||| ||||| ||||||||||| | ||||||||| ||| |||| |||||||||||||||| |||| || |
|
|
| T |
22368553 |
atttgggaattgatgttctgaatcttataagcaatttggagacgtagttttgtagttttgagcaagtc---aacagcagcagcacatccaggttcagaag |
22368649 |
T |
|
| Q |
322 |
catgttgttcctcaagaaagatataatcatcaatgacatcttctatgtgaaaagatgcttctatcagctgcttgatcatgtctttgattttcttgtcttc |
421 |
Q |
| |
|
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22368650 |
attgatgttcctcaaggaagatataatcatcaatgacatcttctatgtgaaaagatgtttctatcagctgcttcgtcatgtctttgattttcttgtcttc |
22368749 |
T |
|
| Q |
422 |
tacatcatcagcccttttatccgcatcgttgatgaagacttctattatttctagttcctcttgcaattcttcaatttcttttgggacacccctaatcatg |
521 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||| |||| || |||| ||||| |||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
22368750 |
tacatcatcagatcttctatccgcatcgttgatgaagtcttcaatgctttcaagttcatctttcaattctgcaatttcttttgggacacccctaatcatg |
22368849 |
T |
|
| Q |
522 |
ttgaatgcttccttcaagaatggaagcaaatgatcacgggctagtggaagcaaatgatcacgagcgcaggcaagtgcatctttacagtcacacattttgt |
621 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
22368850 |
ttgaatgcttccttcaagagtggaagcaaatgatcacgggctagtggaagcaagttatcacgagcgcaggcaagtgcagctttacagtcacacattttgt |
22368949 |
T |
|
| Q |
622 |
tgtatatttgatttcaatttgctaatattgtgagtgagattgaactgtgaggaaaaagctcatagtccttcaagattatat |
702 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22368950 |
tgtatatttgatttcaatttgcta--attgtgagtgagattgaatggtgaggaaaaagctcatagtccttcaagattatat |
22369028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 57 - 661
Target Start/End: Original strand, 22632344 - 22632954
Alignment:
| Q |
57 |
tcaaatcctacaacatcagcttcaaccatgtaaagtggagcgtctcgaaggttctgaaataatgaggcgtttctgtttgttgcataactagttgatgctt |
156 |
Q |
| |
|
|||||||| ||||||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| |||||| || |
|
|
| T |
22632344 |
tcaaatcccacaacatcagcttcatccatataaaatggagcgtctcgaaggttctgcaataatgaggcatttctgtttgttgcagaactacttgatggtt |
22632443 |
T |
|
| Q |
157 |
tatccgaagaagattggatatagaagccatgatctttttcagttcttgtatcatttatttcacttattcgggatttgatgttctgaatcttgtaagctat |
256 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||||| ||||| || |||||||| || |||| ||||||||||||||||||||||| ||| || |
|
|
| T |
22632444 |
tatccgaagaagattggatgtggaagccatgatctttttca---cttgtttcttttatttctctaattctggatttgatgttctgaatcttgtcagcaat |
22632540 |
T |
|
| Q |
257 |
ttggagacggaaagccatagttttgacacagtttgtaacaccagcagcacatccaggatcaggagcatgttgttcctcaagaaagatataatcatcaatg |
356 |
Q |
| |
|
||||||||| | | | ||||||| || ||| || | |||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
22632541 |
ttggagacgaagaatcttagttttcaccaagtcaatagctccagtagcacatccaggatcagaagattgttgttcctcaagaaagatataatcatcaatg |
22632640 |
T |
|
| Q |
357 |
acatcttctatgtgaaaagatgcttctatcagctgcttgatcatgtctttgattttcttgtcttctacatcatcagcccttttatccgcatcgttgatga |
456 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| |
|
|
| T |
22632641 |
acatcttcaatgtgaaaagatgcttctatcagctgcttgatcatgtctttgattttcttgtcttctacatcatcagctgttctatccacatcgttgatga |
22632740 |
T |
|
| Q |
457 |
agacttctattatttctagttcctcttgcaattcttcaatttcttttgggacacccctaatcatgttgaatgcttccttcaagaatggaagcaaatgatc |
556 |
Q |
| |
|
||||||| ||| |||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
22632741 |
agacttcaattctttcaagttcatctttcaattcttcaatttcttttgggacacccctaatcatgttgaatgcttccttcaagagtggaagcaagtgatc |
22632840 |
T |
|
| Q |
557 |
acgggctagtggaagcaaatgatcacgagcgcaggcaagtgcatctttaca------gtcacacattttgttgtatatttgatttcaatttgctaat--- |
647 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| || |||| | | ||| |||||||||||||||||| |||||||| ||||||||| | |
|
|
| T |
22632841 |
acgggctagtggaagcaaatgatcacaagcgcaggaaaatgcagcgtcacacattttatcacacattttgttgtatctttgattttaatttgctactagc |
22632940 |
T |
|
| Q |
648 |
attgtgagtgagat |
661 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
22632941 |
attgtgagtgagat |
22632954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 22 - 574
Target Start/End: Original strand, 22468392 - 22468941
Alignment:
| Q |
22 |
ctaccaaaaaatcaatcaatttgtctcttgtcttatcaaatcctacaacatcagcttcaaccatgtaaagtggagcgtctcgaaggttctgaaataatga |
121 |
Q |
| |
|
||||||| ||||||||||||||||||| || || |||||||| |||| |||||||||| |||| |||| ||||||||||||||||||||| || ||||| |
|
|
| T |
22468392 |
ctaccaacaaatcaatcaatttgtctcgtggctcttcaaatcccacaagatcagcttcatccatataaaatggagcgtctcgaaggttctgcaaaaatga |
22468491 |
T |
|
| Q |
122 |
ggcgtttctgtttgttgcataactagttgatgctttatccgaagaagattggatatagaagccatgatctttttcagttcttgtatcatttatttcactt |
221 |
Q |
| |
|
||||||||||||||||||| |||| |||||| |||||| |||||||||||||| | |||||||||||||||| || ||||| || |||||||| || |
|
|
| T |
22468492 |
ggcgtttctgtttgttgcagaactgcttgatggtttatctgaagaagattggatgttgaagccatgatcttttgca---cttgtttcttttatttctctg |
22468588 |
T |
|
| Q |
222 |
attcgggatttgatgttctgaatcttgtaagctatttggagacggaaagccatagttttgacacagtttgtaacaccagcagcacatccaggatcaggag |
321 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||||||||||| | | ||||||| || ||| | |||||||||||||||||||||||| || |
|
|
| T |
22468589 |
attcgggacttgatgttctgaatcttgtaagttatttggagacgaaggatcttagttttcaccaagtcaacagcaccagcagcacatccaggatcagaag |
22468688 |
T |
|
| Q |
322 |
catgttgttcctcaagaaagatataatcatcaatgacatcttctatgtgaaaagatgcttctatcagctgcttgatcatgtctttgattttcttgtcttc |
421 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22468689 |
attgttgttcctcaagtaagatataatcatcaaccacatcttctatgtgataagatgcttctatcagctgcttgatcatgtctttgattttcttgtcttc |
22468788 |
T |
|
| Q |
422 |
tacatcatcagcccttttatccgcatcgttgatgaagacttctattatttctagttcctcttgcaattcttcaatttcttttgggacacccctaatcatg |
521 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||||| |||| || |||||||||| |||| ||||||| |||||||||| ||| ||||||||||||| |
|
|
| T |
22468789 |
tacatcatcagctcttctatccgcatcgttgatgaagtcttcaatgctttctagttcatctttcaattctacaatttctttcgggttacccctaatcatg |
22468888 |
T |
|
| Q |
522 |
ttgaatgcttccttcaagaatggaagcaaatgatcacgggctagtggaagcaa |
574 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
22468889 |
ttgaatgcttccttgaagagcggaagcaaatgatcacgggctagtggaagcaa |
22468941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 142 - 579
Target Start/End: Original strand, 22631033 - 22631467
Alignment:
| Q |
142 |
aactagttgatgctttatccgaagaagattggatatagaagccatgatctttttcagttcttgtatcatttatttcacttattcgggatttgatgttctg |
241 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||| | ||||||||||||||||||| ||||| || |||||||| || ||| |||||||||||||||| |
|
|
| T |
22631033 |
aactacttgatggtttatccgaagaagattggatgtggaagccatgatctttttca---cttgtttcttttatttctctaatttgggatttgatgttctg |
22631129 |
T |
|
| Q |
242 |
aatcttgtaagctatttggagacggaaagccatagttttgacacagtttgtaacaccagcagcacatccaggatcaggagcatgttgttcctcaagaaag |
341 |
Q |
| |
|
|||||||||||| ||||||||||| | | | ||||||| || ||| | ||||||||||||||||||||||||||||||||||||||| | ||| |
|
|
| T |
22631130 |
aatcttgtaagcaatttggagacgaagaatcttagttttcaccaagtcaacggctccagcagcacatccaggatcaggagcatgttgttcctcatggaag |
22631229 |
T |
|
| Q |
342 |
atataatcatcaatgacatcttctatgtgaaaagatgcttctatcagctgcttgatcatgtctttgattttcttgtcttctacatcatcagcccttttat |
441 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
22631230 |
atataatcatcaatgacatcttccatgtggaaagatgcttctatcagctgcttgatcatgtctttgattttcttgtcttctacatcatcagcccttctat |
22631329 |
T |
|
| Q |
442 |
ccgcatcgttgatgaagacttctattatttctagttcctcttgcaattcttcaatttcttttgggacacccctaatcatgttgaatgcttccttcaagaa |
541 |
Q |
| |
|
|||||||||||||||||||||| ||| |||| ||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22631330 |
ccgcatcgttgatgaagacttcaattctttcaagttcatctttcaattctgcaatttcttttgggacacccctaatcatgttgaatgcttccttcaagag |
22631429 |
T |
|
| Q |
542 |
tggaagcaaatgatcacgggctagtggaagcaaatgat |
579 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22631430 |
tggaagcaagtgatcacgggctagtggaagcaaatgat |
22631467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 31 - 411
Target Start/End: Original strand, 22431604 - 22431978
Alignment:
| Q |
31 |
aatcaatcaatttgtctcttgtcttatcaaatcctacaacatcagcttcaaccatgtaaagtggagcgtctcgaaggttctgaaataatgaggcgtttct |
130 |
Q |
| |
|
||||||||||| ||||||||| || |||||||| ||||||||||||||| |||| |||| ||||||||| ||||| |||| ||||||||||||||||| |
|
|
| T |
22431604 |
aatcaatcaatatgtctcttggctcttcaaatcccacaacatcagcttcatccatataaaatggagcgtcccgaagattcttcaataatgaggcgtttct |
22431703 |
T |
|
| Q |
131 |
gtttgttgcataactagttgatgctttatccgaagaagattggatatagaagccatgatctttttcagttcttgtatcatttatttcacttattcgggat |
230 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||| ||||||||| |
|
|
| T |
22431704 |
gtttgttgcagaactagttgatgctttatccgaagaagattggatatggaagccatgatctttttca---cttgtatcttttatttcactaattcgggat |
22431800 |
T |
|
| Q |
231 |
ttgatgttctgaatcttgtaagctatttggagacggaaagccatagttttgacacagtttgtaacaccagcagcacatccaggatcaggagcatgttgtt |
330 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | | | ||||||||| ||| || ||||||||| ||||||||||||| || ||||||| |
|
|
| T |
22431801 |
ttgatgttctgaatcttgtaagctatttggagacgaagaatcttagttttgatcaagt---caagaccagcagcgcatccaggatcagaagattgttgtt |
22431897 |
T |
|
| Q |
331 |
cctcaagaaagatataatcatcaatgacatcttctatgtgaaaagatgcttctatcagctgcttgatcatgtctttgattt |
411 |
Q |
| |
|
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| |
|
|
| T |
22431898 |
cttcaaggaagatataatcatcaatgacatcttctatgtgaaaagatgcttctatcagctgtttgatctttgctttgattt |
22431978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 69 - 559
Target Start/End: Original strand, 22437125 - 22437624
Alignment:
| Q |
69 |
acatcagcttcaaccatgtaaagtggagcgtctcgaaggttctgaaataatgaggcgtttctgtttgttgcataactagttgatgctttatccgaagaag |
168 |
Q |
| |
|
|||||||||||| ||| | || |||||| | ||||||||||||||||||||| |||| |||||| |||| ||||| ||||||||||||||||||||| |
|
|
| T |
22437125 |
acatcagcttcattcatatgaaatggagcctgtcgaaggttctgaaataatgaattgtttatgtttggtgcagaactacttgatgctttatccgaagaag |
22437224 |
T |
|
| Q |
169 |
attggatatagaagccatgatctttttcagttcttgtatcatttatttcacttattcgggatttgatgttctgaatcttgtaagctatttggagacggaa |
268 |
Q |
| |
|
|||||| | |||| | |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
22437225 |
attggagacggaaggcttgatctttttca---cttgtatcttttatttcactcattcgggatttgatgttctgaatcgtgtaggctatttggagacggtg |
22437321 |
T |
|
| Q |
269 |
agccatagttttgacacagtttgtaacaccagcagcacatccaggatcaggagcatgttgttcctcaagaaagatataatcatcaatgacatcttctatg |
368 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
22437322 |
agccatagttttgacacagtttgtggcaccagcggcacatccaggatcaggagcttgttgttcctcatggaagatataatcatcaatgacatcttctatg |
22437421 |
T |
|
| Q |
369 |
tgaaaagatgcttctatcagctgcttgatcatgtctttga------------ttttcttgtcttctacatcatcagcccttttatccgcatcgttgatga |
456 |
Q |
| |
|
| ||||||||||||||| |||| ||| ||| | |||||| |||| ||||||||| | |||||||| | |||| ||| | |||||| |
|
|
| T |
22437422 |
tcaaaagatgcttctattagcttcttcatccttgctttgattgcatcacttctttttttgtcttcttcttcatcagcgaatctatcttcattgctgatga |
22437521 |
T |
|
| Q |
457 |
agacttctattatttctagttcctcttgcaattcttcaatttcttttgggacacccctaatcatgttgaatgcttccttcaagaatggaagcaaatgatc |
556 |
Q |
| |
|
|| |||| || | |||||||| |||| ||| ||| |||||||||||||||||||||||||||||||||||||| |||| || | ||||||||||||||| |
|
|
| T |
22437522 |
agtcttccatgctctctagttcatctttcaaatctgcaatttcttttgggacacccctaatcatgttgaatgctacctttaatagtggaagcaaatgatc |
22437621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 22 - 662
Target Start/End: Original strand, 22443183 - 22443829
Alignment:
| Q |
22 |
ctaccaaaaaatcaatcaatttgtctcttgtcttatcaaatcctacaacatcagcttcaaccatgtaaagtggagcgtctcgaaggttctgaaataatga |
121 |
Q |
| |
|
||||||| |||||||||||||||||||||| || ||||| || |||| |||||||||| |||| |||| | ||||||| ||||||| || |||||||| |
|
|
| T |
22443183 |
ctaccaacaaatcaatcaatttgtctcttggctcttcaaagccaacaatatcagcttcatccatataaatggaagcgtcttgaaggttgtgcaataatga |
22443282 |
T |
|
| Q |
122 |
ggcgtttctgtttgttgcataactagttgatgctttatccgaagaagattggatatagaagccatgatctttttcagttcttgtatcat---ttatttca |
218 |
Q |
| |
|
||||||| |||||| | ||||| |||||| ||||| ||||||||| |||| | ||||||||||||||||||| |||| ||| | ||||||| |
|
|
| T |
22443283 |
ggcgttttcacttgttggagaactacttgatggcttatcggaagaagatcggatttggaagccatgatctttttca---cttgaatcttgttttatttct |
22443379 |
T |
|
| Q |
219 |
cttattcgggatttgatgttctgaatcttgtaagctatttggagacggaaagccatagttttgacacagtttgtaacaccagcagcacatccaggatcag |
318 |
Q |
| |
|
|| ||||| || ||||||||||||||||| |||||||||||||| | | | ||||||||| ||| || |||||||||||||||| |||||| |
|
|
| T |
22443380 |
ctaattcgagaattgatgttctgaatcttaactgctatttggagacgaagaatcttagttttgatcaagtc---aagaccagcagcacatccaagatcag |
22443476 |
T |
|
| Q |
319 |
gagcatgttgttcctcaagaaagatataatcatcaatgacatcttctatgtgaaaagatgcttctatcagctgcttgatcatgtctttgattttctt--- |
415 |
Q |
| |
|
|| || ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||| |||||||||||| |
|
|
| T |
22443477 |
aagattgatgttcttcaaggaagatataatcatcaatgacatcttctatatgaaaagatgcttctatcaactgtttgatcattgctttgattttctgact |
22443576 |
T |
|
| Q |
416 |
---------gtcttctacatcatcagcccttttatccgcatcgttgatgaagacttctattatttctagttcctcttgcaattcttcaatttcttttggg |
506 |
Q |
| |
|
||||||| || |||||||| || |||| |||| ||||||||| ||| ||| |||||||||| |||| ||||||| |||||||||||||| |
|
|
| T |
22443577 |
tgtttccacgtcttcttcagcatcagccattctatctgcattgttgatgaatttttcaattctttctagttcatctttcaattctgcaatttcttttggg |
22443676 |
T |
|
| Q |
507 |
acacccctaatcatgttgaatgcttccttcaagaatggaagcaaatgatcacgggctagtggaagcaaatgatcacgagcgcaggcaagtgcatctttac |
606 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||| |||||| | |
|
|
| T |
22443677 |
acacccttaatcatgttgaatgcttccttcaagattggaagcaaatgatcacgggctagtggaagcaagttatcacgagcgcaggaaagtgc------ag |
22443770 |
T |
|
| Q |
607 |
agtcacacattttgttgtatatttgatttcaatttg---ctaatattgtgagtgagatt |
662 |
Q |
| |
|
|||||||||||||||| || | |||||| |||||| ||| |||||||||||||||| |
|
|
| T |
22443771 |
tgtcacacattttgttgaatctatgattttaatttgctactagtattgtgagtgagatt |
22443829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 563 - 702
Target Start/End: Original strand, 22437604 - 22437743
Alignment:
| Q |
563 |
tagtggaagcaaatgatcacgagcgcaggcaagtgcatctttacagtcacacattttgttgtatatttgatttcaatttgctaatattgtgagtgagatt |
662 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
22437604 |
tagtggaagcaaatgatcacgagcgcaggcaagtgcagcgttacagtcacacattttgttgtatatttgattttaatttgctaatattgtgagtgagatt |
22437703 |
T |
|
| Q |
663 |
gaactgtgaggaaaaagctcatagtccttcaagattatat |
702 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
22437704 |
gaattgtgaggaaaaagctcatagtccttcaagattatat |
22437743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 469 - 661
Target Start/End: Original strand, 22354262 - 22354448
Alignment:
| Q |
469 |
tttctagttcctcttgcaattcttcaatttcttttgggacacccctaatcatgttgaatgcttccttcaagaatggaagcaaatgatcacgggctagtgg |
568 |
Q |
| |
|
|||| |||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||| || |
|
|
| T |
22354262 |
tttcaagttcctctttcaattctgcaatttcttttgggacaaccctaatcatattgaatgcttccttcaagagtggaagcaaatgatcatgggctagcgg |
22354361 |
T |
|
| Q |
569 |
aagcaaatgatcacgagcgcaggcaagtgcatctttacagtcacacattttgttgtatatttgatttcaatttgctaatattgtgagtgagat |
661 |
Q |
| |
|
|||||| |||||||| ||||||| |||||| | ||||||||||||||||||| |||||||| ||||||||||| || |||||||||| |
|
|
| T |
22354362 |
aagcaagtgatcacgggcgcaggaaagtgc------agtgtcacacattttgttgtatctttgatttgaatttgctaatgttatgagtgagat |
22354448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 22630892 - 22631029
Alignment:
| Q |
31 |
aatcaatcaatttgtctcttgtcttatcaaatcctacaacatcagcttcaaccatgtaaagtggagcgtctcgaaggttctgaaataatgaggcgtttct |
130 |
Q |
| |
|
|||||||||||||||||| || || ||||| || ||||||||||||||| ||| || | |||||| |||||||||||||| |||||||||| |||||| |
|
|
| T |
22630892 |
aatcaatcaatttgtctcgtggctcgtcaaagcccacaacatcagcttcatccaaatacaatggagcatctcgaaggttctggaataatgaggtgtttct |
22630991 |
T |
|
| Q |
131 |
gtttgttgcataactagttgatgctttatccgaagaag |
168 |
Q |
| |
|
|||||||||| ||||| |||||| |||||||||||||| |
|
|
| T |
22630992 |
gtttgttgcagaactacttgatggtttatccgaagaag |
22631029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 592 - 702
Target Start/End: Original strand, 22445499 - 22445608
Alignment:
| Q |
592 |
caagtgcatctttacagtcacacattttgttgtatatttgatttcaatttgctaatattgtgagtgagattgaactgtgaggaaaaagctcatagtcctt |
691 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| |||||||| |
|
|
| T |
22445499 |
caagtgcagctttacggtcacacattttgttgtatatttgatttcaatttgctaatattgtgagtgagat-gaatgacgaggacaaagctattagtcctt |
22445597 |
T |
|
| Q |
692 |
caagattatat |
702 |
Q |
| |
|
||||||||||| |
|
|
| T |
22445598 |
caagattatat |
22445608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 460 - 564
Target Start/End: Original strand, 22638017 - 22638121
Alignment:
| Q |
460 |
cttctattatttctagttcctcttgcaattcttcaatttcttttgggacacccctaatcatgttgaatgcttccttcaagaatggaagcaaatgatcacg |
559 |
Q |
| |
|
|||| ||| |||| ||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
22638017 |
cttcaattctttcaagttcatctttcaattctgcaatttcttttgggacacccctaatcatgttgaatgcttccttcaagagtggaagcaatttatcacg |
22638116 |
T |
|
| Q |
560 |
ggcta |
564 |
Q |
| |
|
|||| |
|
|
| T |
22638117 |
agcta |
22638121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 22459100 - 22459164
Alignment:
| Q |
201 |
cttgtatcatttatttcacttattcgggatttgatgttctgaatcttgtaagctatttggagacg |
265 |
Q |
| |
|
||||||||||| |||||||| ||| |||||||||| |||||||||||||| ||||||||| |||| |
|
|
| T |
22459100 |
cttgtatcattcatttcactaatttgggatttgattttctgaatcttgtatgctatttggcgacg |
22459164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 22482081 - 22482145
Alignment:
| Q |
201 |
cttgtatcatttatttcacttattcgggatttgatgttctgaatcttgtaagctatttggagacg |
265 |
Q |
| |
|
||||||||||| |||||||| ||| |||||||||| |||||||||||||| ||||||||| |||| |
|
|
| T |
22482081 |
cttgtatcattcatttcactaatttgggatttgattttctgaatcttgtatgctatttggcgacg |
22482145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 303 - 391
Target Start/End: Complemental strand, 22207755 - 22207667
Alignment:
| Q |
303 |
gcacatccaggatcaggagcatgttgttcctcaagaaagatataatcatcaatgacatcttctatgtgaaaagatgcttctatcagctg |
391 |
Q |
| |
|
||||||||||||||| ||| |||||| ||||| | ||||| |||||||||||||||| ||| ||||||||||||||| ||||||| |
|
|
| T |
22207755 |
gcacatccaggatcatgaggctgttgtccctcacatatcatatattcatcaatgacatcttgtatctgaaaagatgcttctctcagctg |
22207667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 342 - 520
Target Start/End: Original strand, 22459220 - 22459407
Alignment:
| Q |
342 |
atataatcatcaatgacatcttctatgtgaaaagatgcttctatcagctgcttgatcatgtctttgatt--ttc-------ttgtcttctacatcatcag |
432 |
Q |
| |
|
||||| |||||||||||||||| ||| ||||||||||||||| |||||||||||| | |||||||| ||| ||||| ||| || |||||| |
|
|
| T |
22459220 |
atatattcatcaatgacatcttgaatgccaaaagatgcttctatgagctgcttgatccttgctttgattccttcacttgcattgtcatcttcagcatcag |
22459319 |
T |
|
| Q |
433 |
cccttttatccgcatcgttgatgaagacttctattatttctagttcctcttgcaattcttcaatttcttttgggacacccctaatcat |
520 |
Q |
| |
|
| || |||| |||| |||||||||| ||| || |||| ||||| |||| || ||| ||||||||||||||||||||||||||| |
|
|
| T |
22459320 |
ctattctatctgcattgttgatgaagttttcaatgctttcaagttcttctttcatgtctgaaatttcttttgggacacccctaatcat |
22459407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 342 - 520
Target Start/End: Original strand, 22482201 - 22482388
Alignment:
| Q |
342 |
atataatcatcaatgacatcttctatgtgaaaagatgcttctatcagctgcttgatcatgtctttgatt--ttc-------ttgtcttctacatcatcag |
432 |
Q |
| |
|
||||| |||||||||||||||| ||| ||||||||||||||| |||||||||||| | |||||||| ||| ||||| ||| || |||||| |
|
|
| T |
22482201 |
atatattcatcaatgacatcttgaatgccaaaagatgcttctatgagctgcttgatccttgctttgattccttcacttgcattgtcatcttcagcatcag |
22482300 |
T |
|
| Q |
433 |
cccttttatccgcatcgttgatgaagacttctattatttctagttcctcttgcaattcttcaatttcttttgggacacccctaatcat |
520 |
Q |
| |
|
| || |||| |||| |||||||||| ||| || |||| ||||| |||| || ||| ||||||||||||||||||||||||||| |
|
|
| T |
22482301 |
ctattctatctgcattgttgatgaagttttcaatgctttcaagttcttctttcatgtctgaaatttcttttgggacacccctaatcat |
22482388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 350 - 394
Target Start/End: Original strand, 3221871 - 3221915
Alignment:
| Q |
350 |
atcaatgacatcttctatgtgaaaagatgcttctatcagctgctt |
394 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
3221871 |
atcaatcacatcttctatgtgaaaagatgcttctcttagctgctt |
3221915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 339 - 390
Target Start/End: Original strand, 22370908 - 22370959
Alignment:
| Q |
339 |
aagatataatcatcaatgacatcttctatgtgaaaagatgcttctatcagct |
390 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||| |||| |||||| |
|
|
| T |
22370908 |
aagatatattcatcaatgacatcttctatgtaaaaagatatttctttcagct |
22370959 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 348 - 394
Target Start/End: Complemental strand, 2748726 - 2748680
Alignment:
| Q |
348 |
tcatcaatgacatcttctatgtgaaaagatgcttctatcagctgctt |
394 |
Q |
| |
|
||||||||||||||||| ||| |||| ||||||||| |||||||||| |
|
|
| T |
2748726 |
tcatcaatgacatcttcaatgcgaaatgatgcttctctcagctgctt |
2748680 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 348 - 394
Target Start/End: Complemental strand, 2768797 - 2768751
Alignment:
| Q |
348 |
tcatcaatgacatcttctatgtgaaaagatgcttctatcagctgctt |
394 |
Q |
| |
|
||||||||||||||||| ||| |||| ||||||||| |||||||||| |
|
|
| T |
2768797 |
tcatcaatgacatcttcaatgcgaaatgatgcttctctcagctgctt |
2768751 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 348 - 394
Target Start/End: Original strand, 2839010 - 2839056
Alignment:
| Q |
348 |
tcatcaatgacatcttctatgtgaaaagatgcttctatcagctgctt |
394 |
Q |
| |
|
||||||||||||||||| ||| |||| ||||||||| |||||||||| |
|
|
| T |
2839010 |
tcatcaatgacatcttcaatgcgaaatgatgcttctctcagctgctt |
2839056 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 348 - 394
Target Start/End: Original strand, 2856220 - 2856266
Alignment:
| Q |
348 |
tcatcaatgacatcttctatgtgaaaagatgcttctatcagctgctt |
394 |
Q |
| |
|
||||||||||||||||| ||| |||| ||||||||| |||||||||| |
|
|
| T |
2856220 |
tcatcaatgacatcttcaatgcgaaatgatgcttctctcagctgctt |
2856266 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 348 - 394
Target Start/End: Complemental strand, 3200681 - 3200635
Alignment:
| Q |
348 |
tcatcaatgacatcttctatgtgaaaagatgcttctatcagctgctt |
394 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||| | |||||||| |
|
|
| T |
3200681 |
tcatcaatcacatcttctatgcgaaaagatgcttctcttagctgctt |
3200635 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 348 - 394
Target Start/End: Original strand, 3357767 - 3357813
Alignment:
| Q |
348 |
tcatcaatgacatcttctatgtgaaaagatgcttctatcagctgctt |
394 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||| | |||||||| |
|
|
| T |
3357767 |
tcatcaatcacatcttctatgcgaaaagatgcttctcttagctgctt |
3357813 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 22010540 - 22010502
Alignment:
| Q |
344 |
ataatcatcaatgacatcttctatgtgaaaagatgcttc |
382 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
22010540 |
ataatcatcaatgatatcttctatgtgaaaagctgcttc |
22010502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 22186706 - 22186668
Alignment:
| Q |
344 |
ataatcatcaatgacatcttctatgtgaaaagatgcttc |
382 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
22186706 |
ataatcatcaatgatatcttctatgtgaaaagctgcttc |
22186668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 608 - 650
Target Start/End: Original strand, 22371143 - 22371185
Alignment:
| Q |
608 |
gtcacacattttgttgtatatttgatttcaatttgctaatatt |
650 |
Q |
| |
|
||||||||||||||||||| || ||||| |||||||||||||| |
|
|
| T |
22371143 |
gtcacacattttgttgtatcttcgatttgaatttgctaatatt |
22371185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 609 - 661
Target Start/End: Original strand, 22638148 - 22638203
Alignment:
| Q |
609 |
tcacacattttgttgtatatttgatttcaatttg---ctaatattgtgagtgagat |
661 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||| ||| ||||||||||||||| |
|
|
| T |
22638148 |
tcacacattttgttgtatctttgattttaatttgctactagtattgtgagtgagat |
22638203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 375
Target Start/End: Original strand, 22657830 - 22657863
Alignment:
| Q |
342 |
atataatcatcaatgacatcttctatgtgaaaag |
375 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |
|
|
| T |
22657830 |
atataatcatcaatgacatcttctatgcgaaaag |
22657863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 523
Target Start/End: Original strand, 29611145 - 29611175
Alignment:
| Q |
493 |
caatttcttttgggacacccctaatcatgtt |
523 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
29611145 |
caatttcttttgggacacccctaatcatgtt |
29611175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 375
Target Start/End: Complemental strand, 34975219 - 34975186
Alignment:
| Q |
342 |
atataatcatcaatgacatcttctatgtgaaaag |
375 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |
|
|
| T |
34975219 |
atataatcatcaatgacatcttctatgagaaaag |
34975186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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