View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18727_high_23 (Length: 293)

Name: NF18727_high_23
Description: NF18727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18727_high_23
NF18727_high_23
[»] chr4 (34 HSPs)
chr4 (1-208)||(56274793-56275000)
chr4 (231-276)||(55496068-55496113)
chr4 (230-276)||(6238210-6238256)
chr4 (230-276)||(39840226-39840272)
chr4 (230-276)||(43374617-43374663)
chr4 (230-276)||(45561347-45561393)
chr4 (230-276)||(55001775-55001821)
chr4 (231-276)||(6287860-6287905)
chr4 (231-276)||(30653322-30653367)
chr4 (231-276)||(47633875-47633920)
chr4 (231-276)||(53431653-53431698)
chr4 (230-265)||(202312-202347)
chr4 (230-276)||(2943683-2943729)
chr4 (230-276)||(19801894-19801940)
chr4 (230-276)||(20356732-20356778)
chr4 (230-276)||(24152698-24152744)
chr4 (231-277)||(32012570-32012616)
chr4 (230-276)||(33984110-33984156)
chr4 (230-276)||(37114465-37114511)
chr4 (234-276)||(37498229-37498271)
chr4 (230-276)||(53284029-53284075)
chr4 (230-276)||(54683619-54683665)
chr4 (230-267)||(7113629-7113666)
chr4 (230-267)||(10658923-10658960)
chr4 (230-267)||(10873068-10873105)
chr4 (231-276)||(19800949-19800994)
chr4 (230-267)||(19912695-19912732)
chr4 (235-276)||(25687013-25687054)
chr4 (230-267)||(30411292-30411329)
chr4 (230-267)||(48953052-48953089)
chr4 (230-267)||(49648860-49648897)
chr4 (230-266)||(14269864-14269900)
chr4 (235-267)||(30653525-30653557)
chr4 (231-267)||(49646048-49646084)
[»] chr8 (25 HSPs)
chr8 (230-276)||(3512493-3512539)
chr8 (230-277)||(24804517-24804564)
chr8 (230-276)||(2773614-2773660)
chr8 (234-276)||(16786562-16786604)
chr8 (230-276)||(41355633-41355679)
chr8 (234-277)||(5838282-5838325)
chr8 (230-276)||(38746988-38747034)
chr8 (231-276)||(20697537-20697582)
chr8 (231-276)||(22215134-22215179)
chr8 (231-276)||(36859251-36859296)
chr8 (230-277)||(14911787-14911834)
chr8 (230-277)||(40529523-40529570)
chr8 (230-276)||(25099435-25099481)
chr8 (230-276)||(34903409-34903455)
chr8 (230-276)||(35160301-35160347)
chr8 (230-276)||(39733748-39733794)
chr8 (230-276)||(43800800-43800846)
chr8 (230-267)||(12208828-12208865)
chr8 (230-267)||(12453256-12453293)
chr8 (230-267)||(18146364-18146401)
chr8 (230-267)||(29725763-29725800)
chr8 (231-272)||(35057336-35057377)
chr8 (230-267)||(43150274-43150311)
chr8 (230-267)||(45069859-45069896)
chr8 (231-267)||(35019510-35019546)
[»] chr7 (30 HSPs)
chr7 (230-276)||(6476948-6476994)
chr7 (230-276)||(46349915-46349961)
chr7 (230-276)||(46534430-46534476)
chr7 (230-277)||(43156590-43156637)
chr7 (230-276)||(25696055-25696101)
chr7 (230-276)||(28235307-28235353)
chr7 (230-276)||(30523985-30524031)
chr7 (230-276)||(42265304-42265350)
chr7 (230-276)||(42329054-42329100)
chr7 (231-267)||(36121454-36121490)
chr7 (230-277)||(35647438-35647485)
chr7 (230-277)||(46672528-46672575)
chr7 (230-276)||(4060374-4060420)
chr7 (230-276)||(6243889-6243935)
chr7 (230-276)||(21920827-21920873)
chr7 (230-276)||(27826731-27826777)
chr7 (230-276)||(28494307-28494353)
chr7 (230-276)||(28958153-28958199)
chr7 (230-276)||(43337655-43337701)
chr7 (231-276)||(981360-981405)
chr7 (231-276)||(14792148-14792193)
chr7 (230-267)||(30582693-30582730)
chr7 (230-267)||(35670394-35670431)
chr7 (230-267)||(37658155-37658192)
chr7 (230-267)||(39870061-39870098)
chr7 (230-267)||(40061185-40061222)
chr7 (230-271)||(42328221-42328262)
chr7 (231-276)||(46350867-46350912)
chr7 (230-271)||(48935257-48935298)
chr7 (231-267)||(1602166-1602202)
[»] chr5 (25 HSPs)
chr5 (230-276)||(35766581-35766627)
chr5 (230-276)||(5050133-5050179)
chr5 (230-277)||(11784223-11784270)
chr5 (230-276)||(76436-76482)
chr5 (230-276)||(6789645-6789691)
chr5 (230-276)||(7157529-7157575)
chr5 (230-276)||(13359512-13359558)
chr5 (230-276)||(16218339-16218385)
chr5 (230-276)||(25881529-25881575)
chr5 (230-276)||(34589957-34590003)
chr5 (230-276)||(41734300-41734346)
chr5 (231-276)||(17540284-17540329)
chr5 (230-275)||(24171387-24171432)
chr5 (230-277)||(2891004-2891051)
chr5 (230-277)||(10815085-10815132)
chr5 (234-276)||(7615033-7615075)
chr5 (230-276)||(12280803-12280849)
chr5 (230-276)||(15498667-15498713)
chr5 (230-276)||(17645328-17645374)
chr5 (230-276)||(29525352-29525398)
chr5 (230-276)||(36761084-36761130)
chr5 (230-276)||(36944271-36944317)
chr5 (230-276)||(37530776-37530822)
chr5 (230-276)||(42709333-42709379)
chr5 (230-267)||(20017346-20017383)
[»] chr3 (32 HSPs)
chr3 (230-276)||(32999688-32999734)
chr3 (230-277)||(19274752-19274799)
chr3 (230-276)||(10809530-10809576)
chr3 (230-276)||(42528087-42528133)
chr3 (230-276)||(12764693-12764739)
chr3 (230-276)||(17666637-17666683)
chr3 (230-276)||(17666824-17666870)
chr3 (230-267)||(46115010-46115047)
chr3 (235-276)||(51980759-51980800)
chr3 (230-277)||(1361693-1361740)
chr3 (230-277)||(12122204-12122251)
chr3 (234-277)||(45356448-45356491)
chr3 (230-276)||(8321462-8321508)
chr3 (230-276)||(9558891-9558937)
chr3 (231-277)||(10802715-10802761)
chr3 (230-276)||(30317975-30318021)
chr3 (230-276)||(34436006-34436052)
chr3 (230-276)||(41991715-41991761)
chr3 (230-276)||(48051016-48051062)
chr3 (230-276)||(52959314-52959360)
chr3 (230-267)||(7041752-7041789)
chr3 (230-267)||(12122921-12122958)
chr3 (230-267)||(22978101-22978138)
chr3 (230-267)||(32111600-32111637)
chr3 (230-267)||(34785918-34785955)
chr3 (230-267)||(36660176-36660213)
chr3 (230-267)||(42167372-42167409)
chr3 (230-267)||(42877262-42877299)
chr3 (230-267)||(43860748-43860785)
chr3 (230-267)||(48071998-48072035)
chr3 (230-267)||(50935735-50935772)
chr3 (231-267)||(32390154-32390190)
[»] chr1 (23 HSPs)
chr1 (230-276)||(41865309-41865355)
chr1 (230-276)||(2459677-2459723)
chr1 (230-276)||(46742478-46742524)
chr1 (230-277)||(38815579-38815626)
chr1 (230-276)||(27747629-27747675)
chr1 (230-276)||(46315719-46315765)
chr1 (230-276)||(50586210-50586256)
chr1 (230-277)||(2937359-2937406)
chr1 (234-277)||(9423085-9423128)
chr1 (230-276)||(11823606-11823652)
chr1 (230-276)||(30358096-30358142)
chr1 (230-276)||(38058771-38058817)
chr1 (230-276)||(39325633-39325679)
chr1 (234-276)||(44277996-44278038)
chr1 (230-276)||(47326615-47326661)
chr1 (230-267)||(3796004-3796041)
chr1 (230-267)||(4640133-4640170)
chr1 (230-267)||(5698148-5698185)
chr1 (230-267)||(14390444-14390481)
chr1 (231-276)||(25365783-25365828)
chr1 (230-267)||(31496632-31496669)
chr1 (230-267)||(44109972-44110009)
chr1 (230-267)||(44299984-44300021)
[»] chr2 (25 HSPs)
chr2 (230-276)||(42097943-42097989)
chr2 (230-276)||(5774115-5774161)
chr2 (230-276)||(6432192-6432238)
chr2 (230-276)||(11018063-11018109)
chr2 (230-276)||(30523631-30523677)
chr2 (230-276)||(34245268-34245314)
chr2 (230-276)||(36936104-36936150)
chr2 (230-276)||(39241192-39241238)
chr2 (230-276)||(43496184-43496230)
chr2 (234-276)||(43568389-43568431)
chr2 (231-277)||(3147470-3147516)
chr2 (230-276)||(10361415-10361461)
chr2 (230-276)||(12160945-12160991)
chr2 (230-276)||(16496647-16496693)
chr2 (230-276)||(28014487-28014533)
chr2 (230-276)||(38324260-38324306)
chr2 (230-276)||(42519736-42519782)
chr2 (230-276)||(45376931-45376977)
chr2 (231-276)||(8875696-8875741)
chr2 (230-267)||(14452322-14452359)
chr2 (230-267)||(18109755-18109792)
chr2 (230-267)||(33178983-33179020)
chr2 (230-267)||(36600959-36600996)
chr2 (232-276)||(7454556-7454600)
chr2 (231-267)||(15265381-15265417)
[»] chr6 (11 HSPs)
chr6 (230-276)||(25023486-25023532)
chr6 (230-276)||(21459044-21459090)
chr6 (230-277)||(20645680-20645727)
chr6 (230-276)||(13756351-13756397)
chr6 (230-276)||(21860256-21860302)
chr6 (230-276)||(22707313-22707359)
chr6 (230-276)||(24119270-24119316)
chr6 (230-267)||(1789809-1789846)
chr6 (230-267)||(5090124-5090161)
chr6 (231-276)||(12130504-12130549)
chr6 (230-267)||(18368774-18368811)
[»] scaffold0060 (1 HSPs)
scaffold0060 (230-277)||(57879-57926)
[»] scaffold0007 (1 HSPs)
scaffold0007 (230-277)||(157645-157692)
[»] scaffold0115 (2 HSPs)
scaffold0115 (230-267)||(4171-4208)
scaffold0115 (230-267)||(11911-11948)


Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 56275000 - 56274793
Alignment:
Q  1 tgcaaaacatcaaatcgtaaaatatgtgacaaaattattgaactaaccaaatattgctaatttagagtaattttgtgaaactctttttctaattgtctac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56275000 tgcaaaacatcaaatcgtaaaatatgtgacaaaattattgaactaacgaaatattgctaatttagagtaattttgtgaaactctttttctaattgtctac 56274901  T
Q  101 tgattctaaataacttgcacatatacaccctcgtgatgataaatgcatgggggacttgagtgagatttggtcaaattaacaaaaaatagaccaagtccaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  56274900 tgattctaaataacttgcacatatacaccctcgtgatgataaatgcatgggggacttgagtgagatttggtcaaattaacaataaatagaccaagtccaa 56274801  T
Q  201 tcctaata 208  Q
    ||||||||    
T  56274800 tcctaata 56274793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 55496113 - 55496068
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  55496113 tagcttatagcttgttggactagcttataagcttgttggatgaaaa 55496068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 6238210 - 6238256
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  6238210 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 6238256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 39840272 - 39840226
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  39840272 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 39840226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 43374617 - 43374663
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  43374617 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 43374663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 45561393 - 45561347
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  45561393 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 45561347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 55001821 - 55001775
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  55001821 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 55001775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 6287860 - 6287905
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||||| |||||||||||||| || |||||||||||    
T  6287860 tagcttatagcttcttagattagcttataagtttattggatgaaaa 6287905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 30653367 - 30653322
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||||    
T  30653367 tagcttatggcttgttggactagcttataagcttgttggatgaaaa 30653322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 47633920 - 47633875
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  47633920 tagcttatagcttgttggattagcttataagctcgttagatgaaaa 47633875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 53431653 - 53431698
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  53431653 tagcttatagcttgttggactagcttataagtttgttggatgaaaa 53431698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 265
Target Start/End: Original strand, 202312 - 202347
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttg 265  Q
    |||||||||||||| |||||||||||||||||||||    
T  202312 ctagcttatagcttgttggattagcttataagcttg 202347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 2943729 - 2943683
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||| || ||||||||||||||||||| ||| ||||||||    
T  2943729 ctagcttatagtttgttggattagcttataagctcgttagatgaaaa 2943683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 19801940 - 19801894
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  19801940 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 19801894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 20356778 - 20356732
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||||||    
T  20356778 ctagcttataacttgttggattagcttataagctcgttagatgaaaa 20356732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 24152698 - 24152744
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||| ||| ||||||||| ||||||||||||    
T  24152698 ctagcttatagcttgttggactagtttataagctagttggatgaaaa 24152744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 32012570 - 32012616
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    ||||||||||||| || |||||||||||||| ||||| |||||||||    
T  32012570 tagcttatagcttgttagattagcttataagtttgttagatgaaaat 32012616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 33984110 - 33984156
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||| ||||||||||||||| ||| ||||||||    
T  33984110 ctagcttatagcttgttgaattagcttataagctcgttagatgaaaa 33984156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 37114511 - 37114465
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| |||  |||||||    
T  37114511 ctagcttatagcttgttggattagcttataagctcgttatatgaaaa 37114465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 276
Target Start/End: Original strand, 37498229 - 37498271
Alignment:
Q  234 cttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||| || ||||||||||||||||||| ||||||||||||    
T  37498229 cttatagtttgttggattagcttataagctcgttggatgaaaa 37498271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 53284029 - 53284075
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  53284029 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 53284075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 54683619 - 54683665
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||| ||| || |||||||||||||||| ||||||||||||    
T  54683619 ctagcttataacttgttagattagcttataagctcgttggatgaaaa 54683665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 7113666 - 7113629
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  7113666 ctagcttatagcttgttggactagcttataagcttgtt 7113629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 10658960 - 10658923
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  10658960 ctagcttatagcttattggactagcttataagcttgtt 10658923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 10873105 - 10873068
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  10873105 ctagcttatagcttattggactagcttataagcttgtt 10873068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 19800949 - 19800994
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||| ||||||||||||||||||| |||  |||||||    
T  19800949 tagcttatagcttgttggattagcttataagctcgttacatgaaaa 19800994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 19912695 - 19912732
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  19912695 ctagcttatagcttgttggactagcttataagcttgtt 19912732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 276
Target Start/End: Original strand, 25687013 - 25687054
Alignment:
Q  235 ttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||| || |||||||||||||||||||||||| |||||||    
T  25687013 ttatagttttttggattagcttataagcttgttgtatgaaaa 25687054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 30411329 - 30411292
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  30411329 ctagcttatagcttgttggactagcttataagcttgtt 30411292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 48953052 - 48953089
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  48953052 ctagcttatagcttgttggactagcttataagcttgtt 48953089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 49648897 - 49648860
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  49648897 ctagcttatagcttgttggactagcttataagcttgtt 49648860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 14269900 - 14269864
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgt 266  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  14269900 ctagcttatagcttgttggactagcttataagcttgt 14269864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 30653525 - 30653557
Alignment:
Q  235 ttatagcttcttggattagcttataagcttgtt 267  Q
    ||||||||| |||||||||||||||||||||||    
T  30653525 ttatagcttgttggattagcttataagcttgtt 30653557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 49646048 - 49646084
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgtt 267  Q
    ||||||||||| | |||||||||||||||||||||||    
T  49646048 tagcttatagcctgttggattagcttataagcttgtt 49646084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 7e-18; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 3512493 - 3512539
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3512493 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 3512539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 24804564 - 24804517
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24804564 ctagcttatagcttcttggattagcctataagcttgttggatgaaaat 24804517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 2773660 - 2773614
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  2773660 ctagcttatagcttgttggactagcttataagcttgttggatgaaaa 2773614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 276
Target Start/End: Complemental strand, 16786604 - 16786562
Alignment:
Q  234 cttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  16786604 cttatagcttcttggattagcttataagcttgttgaatgaaaa 16786562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 41355633 - 41355679
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||    
T  41355633 ctagcttatagctccttggattagcttataagtttgttggatgaaaa 41355679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 277
Target Start/End: Original strand, 5838282 - 5838325
Alignment:
Q  234 cttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||| ||||||||||||||||||||||| |||||||||    
T  5838282 cttatagcttgttggattagcttataagcttgttagatgaaaat 5838325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 38747034 - 38746988
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  38747034 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 38746988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 20697582 - 20697537
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  20697582 tagcttatagcttgttggattagcttataagctcgttagatgaaaa 20697537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 22215134 - 22215179
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  22215134 tagcttatagcttgttggattagcttataagctcgttagatgaaaa 22215179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 36859251 - 36859296
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  36859251 tagcttatagcttgttggattagcttataagctcgttagatgaaaa 36859296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 14911787 - 14911834
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    ||||||||||| || ||||||||||||||||||| ||| |||||||||    
T  14911787 ctagcttatagtttgttggattagcttataagctcgttagatgaaaat 14911834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 40529523 - 40529570
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||||||| || | |||||||||||||||||| |||||||||    
T  40529523 ctagcttatagcttgtttgtttagcttataagcttgttagatgaaaat 40529570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 25099435 - 25099481
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||||||    
T  25099435 ctagcttataacttgttggattagcttataagctcgttagatgaaaa 25099481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 34903455 - 34903409
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||| | ||| ||||| ||||||||||||||||||||||||||    
T  34903455 ctagcttacaccttgttggactagcttataagcttgttggatgaaaa 34903409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 35160347 - 35160301
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||| | ||| ||||||||    
T  35160347 ctagcttatagcttattggattagcttataagttcgttagatgaaaa 35160301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 39733748 - 39733794
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||| ||| ||||||||||||||||||| ||| ||||||||    
T  39733748 ctagcttataccttgttggattagcttataagctcgttagatgaaaa 39733794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 43800846 - 43800800
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  43800846 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 43800800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 12208828 - 12208865
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  12208828 ctagcttatagcttgttggactagcttataagcttgtt 12208865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 12453256 - 12453293
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  12453256 ctagcttatagcttgttggactagcttataagcttgtt 12453293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 18146364 - 18146401
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  18146364 ctagcttatagcttgttggactagcttataagcttgtt 18146401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 29725763 - 29725800
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  29725763 ctagcttatagcttgttggactagcttataagcttgtt 29725800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 35057377 - 35057336
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatg 272  Q
    ||||||||||||| || |||||||||||||||| ||||||||    
T  35057377 tagcttatagcttgttagattagcttataagctcgttggatg 35057336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 43150274 - 43150311
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  43150274 ctagcttatagcttgttggactagcttataagcttgtt 43150311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 45069896 - 45069859
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  45069896 ctagcttatagcttgttggactagcttataagcttgtt 45069859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 35019510 - 35019546
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgtt 267  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  35019510 tagcttatagcttgttggactagcttataagcttgtt 35019546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 6476948 - 6476994
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  6476948 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 6476994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 46349961 - 46349915
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  46349961 ctagcttatagcttcttggattaacttataagcttgttggatgaaaa 46349915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 46534430 - 46534476
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  46534430 ctagcttatagcttgttggattagcttataagcttgttggatgaaaa 46534476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 43156590 - 43156637
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  43156590 ctagcttatagcttgttggattagcttataagctcgttagatgaaaat 43156637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 25696055 - 25696101
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||    
T  25696055 ctagcttatagcttgttagattagcttataagctcgttggatgaaaa 25696101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 28235307 - 28235353
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||| || ||||||||||||||||||| ||||||||||||    
T  28235307 ctagcttatagtttgttggattagcttataagctcgttggatgaaaa 28235353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 30524031 - 30523985
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||    
T  30524031 ctagcttatagcttgttggattaactcataagcttgttggatgaaaa 30523985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 42265350 - 42265304
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  42265350 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 42265304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 42329100 - 42329054
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  42329100 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 42329054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 36121454 - 36121490
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgtt 267  Q
    ||||||||||||| |||||||||||||||||||||||    
T  36121454 tagcttatagcttattggattagcttataagcttgtt 36121490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 35647438 - 35647485
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||||||| ||||||| ||||||||||| ||| |||||||||    
T  35647438 ctagcttatagcttgttggatttgcttataagctcgttagatgaaaat 35647485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 46672528 - 46672575
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||| ||| ||||||||||||||||||| ||| |||||||||    
T  46672528 ctagcttataacttgttggattagcttataagctcgttagatgaaaat 46672575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 4060374 - 4060420
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||| || ||||||||||||||||||| ||| ||||||||    
T  4060374 ctagcttatagtttgttggattagcttataagctcgttagatgaaaa 4060420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 6243889 - 6243935
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||| ||||||||| ||||||||||||||||||| ||| ||||||||    
T  6243889 ctagtttatagcttgttggattagcttataagctcgttagatgaaaa 6243935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 21920873 - 21920827
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||| ||||||||||||| |||| |||||||    
T  21920873 ctagcttatagcttgttggactagcttataagctagttgaatgaaaa 21920827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 27826731 - 27826777
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  27826731 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 27826777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 28494353 - 28494307
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  28494353 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 28494307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 28958199 - 28958153
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  28958199 ctagcttatagcttgttggattaacttataagctcgttagatgaaaa 28958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 43337655 - 43337701
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  43337655 ctagcttatagcttgttggattagcttataagctcgttagacgaaaa 43337701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 981360 - 981405
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||| || ||||||||||||||||||| |||| |||||||    
T  981360 tagcttatagtttgttggattagcttataagctagttgaatgaaaa 981405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 14792193 - 14792148
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||| || |||||||||||||||| ||||||| ||||    
T  14792193 tagcttatagcttgttagattagcttataagctcgttggattaaaa 14792148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 30582693 - 30582730
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  30582693 ctagcttatagcttgttggactagcttataagcttgtt 30582730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 35670431 - 35670394
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  35670431 ctagcttatagcttgttggactagcttataagcttgtt 35670394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 37658192 - 37658155
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  37658192 ctagcttatagcttgttggactagcttataagcttgtt 37658155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 39870098 - 39870061
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    ||||||||||| || |||||||||||||||||||||||    
T  39870098 ctagcttatagtttgttggattagcttataagcttgtt 39870061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 40061185 - 40061222
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  40061185 ctagcttatagcttgttggactagcttataagcttgtt 40061222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 42328262 - 42328221
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggat 271  Q
    |||||||||||||  ||| |||||||||||||||||||||||    
T  42328262 ctagcttatagctagttgaattagcttataagcttgttggat 42328221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 46350912 - 46350867
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||| ||||||||| ||||||||| ||| ||||||||    
T  46350912 tagcttatagcttgttggattagtttataagctcgttagatgaaaa 46350867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 48935257 - 48935298
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggat 271  Q
    |||||||||||||| ||||||||| ||||||||| |||||||    
T  48935257 ctagcttatagcttgttggattagtttataagctcgttggat 48935298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 1602202 - 1602166
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgtt 267  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  1602202 tagcttatagcttgttggactagcttataagcttgtt 1602166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 35766581 - 35766627
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  35766581 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 35766627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 5050179 - 5050133
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  5050179 ctagcttatagcttgttggattagcttataagctcgttggatgaaaa 5050133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 11784270 - 11784223
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  11784270 ctagcttatagcttgttggattagcttataagctcgttagatgaaaat 11784223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 76436 - 76482
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  76436 ctagcttatagctttttggattagcttataagctcgttagatgaaaa 76482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 6789691 - 6789645
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  6789691 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 6789645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 7157575 - 7157529
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||| || |||||||||||||||||||||||    
T  7157575 ctagcttatagcttgttggactaacttataagcttgttggatgaaaa 7157529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 13359558 - 13359512
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  13359558 ctagcatatagcttgttggattagcttataagcttgttagatgaaaa 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 16218385 - 16218339
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  16218385 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 16218339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 25881529 - 25881575
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||    
T  25881529 ctagcttatagcttgttagattagcttataagctcgttggatgaaaa 25881575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 34590003 - 34589957
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  34590003 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 34589957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 41734346 - 41734300
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  41734346 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 41734300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 17540284 - 17540329
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  17540284 tagcttatagcttgttggattagcttataagctcgttggattaaaa 17540329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 24171387 - 24171432
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaa 275  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||    
T  24171387 ctagcttatagcttgttggattagcttataagctcgttagatgaaa 24171432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 2891051 - 2891004
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    ||||||||||| || ||||| || ||||||||||||||||||||||||    
T  2891051 ctagcttatagtttgttggactaacttataagcttgttggatgaaaat 2891004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 10815085 - 10815132
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    ||||||||||| || ||||||||||||||||||| ||| |||||||||    
T  10815085 ctagcttatagtttgttggattagcttataagctcgttagatgaaaat 10815132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 276
Target Start/End: Complemental strand, 7615075 - 7615033
Alignment:
Q  234 cttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||    
T  7615075 cttatagcttgttggattagcttataagctcgttagatgaaaa 7615033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 12280803 - 12280849
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||| || ||||||||||||||||||| ||| ||||||||    
T  12280803 ctagcttatagtttgttggattagcttataagctcgttagatgaaaa 12280849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 15498667 - 15498713
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  15498667 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 15498713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 17645328 - 17645374
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| || |||||||||||||| | ||||||||||||    
T  17645328 ctagcttatagcttgttagattagcttataagttcgttggatgaaaa 17645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 29525398 - 29525352
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  29525398 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 29525352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 36761084 - 36761130
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||| || ||||||||||||||||||| ||| ||||||||    
T  36761084 ctagcttataggttgttggattagcttataagctcgttagatgaaaa 36761130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 36944317 - 36944271
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| || || || |||||||||||||||||||||||    
T  36944317 ctagcttatagcttgttagactaacttataagcttgttggatgaaaa 36944271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 37530822 - 37530776
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  37530822 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 37530776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 42709333 - 42709379
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  42709333 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 42709379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 20017383 - 20017346
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  20017383 ctagcttatagcttgttggactagcttataagcttgtt 20017346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 32999734 - 32999688
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32999734 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 32999688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 19274752 - 19274799
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  19274752 ctagcttatagcttgttggattagcttataagctcgttggatgaaaat 19274799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 10809576 - 10809530
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  10809576 ctagcttatagcttcttgaattagcttataagcttgttggatcaaaa 10809530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 42528133 - 42528087
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  42528133 ctagcttatagcttgttggactagcttataagcttgttggatgaaaa 42528087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 12764693 - 12764739
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  12764693 ctagtttatagctttttggattagcttataagcttgctggatgaaaa 12764739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 17666637 - 17666683
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  17666637 ctagcttatagcttgttgaattagcttataagcttgttggatcaaaa 17666683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 17666824 - 17666870
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| |||||||| |||||||||| ||||||||||||    
T  17666824 ctagcttatagcttattggattaacttataagctcgttggatgaaaa 17666870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 46115010 - 46115047
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| |||||||||||||||||||||||    
T  46115010 ctagcttatagcttgttggattagcttataagcttgtt 46115047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 276
Target Start/End: Original strand, 51980759 - 51980800
Alignment:
Q  235 ttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||| ||||| ||||||||||||||||||||||||||    
T  51980759 ttatagcttgttggactagcttataagcttgttggatgaaaa 51980800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 1361693 - 1361740
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||||||| ||||||||||||||||||| ||| ||| |||||    
T  1361693 ctagcttatagcttgttggattagcttataagctcgttagataaaaat 1361740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 12122251 - 12122204
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||||||| ||| |||||||||||||||||||| || |||||    
T  12122251 ctagcttatagcttgttgaattagcttataagcttgttgtatcaaaat 12122204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 234 - 277
Target Start/End: Complemental strand, 45356491 - 45356448
Alignment:
Q  234 cttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||| ||| ||||||||||||||||||||||| |||||    
T  45356491 cttatagcttgttgaattagcttataagcttgttggatcaaaat 45356448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 8321508 - 8321462
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  8321508 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 8321462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 9558937 - 9558891
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| || |||||||||||||||| |||||| |||||    
T  9558937 ctagcttatagcttgttagattagcttataagctcgttggaagaaaa 9558891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 277
Target Start/End: Complemental strand, 10802761 - 10802715
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    ||||||||||||||||| ||||||||||||| ||||| ||| |||||    
T  10802761 tagcttatagcttcttgaattagcttataagtttgtttgatcaaaat 10802715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 30318021 - 30317975
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||| || ||||||||||||||||||| ||| ||||||||    
T  30318021 ctagcttatagtttgttggattagcttataagctcgttagatgaaaa 30317975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 34436052 - 34436006
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  34436052 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 34436006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 41991761 - 41991715
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  41991761 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 41991715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 48051016 - 48051062
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  48051016 ctagcttatagcttgttggattaacttataagctcgttagatgaaaa 48051062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 52959314 - 52959360
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||| || |||||||| |||||||||| ||||||||||||    
T  52959314 ctagcttatagtttgttggattaacttataagctcgttggatgaaaa 52959360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 7041752 - 7041789
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  7041752 ctagcttatagcttgttggactagcttataagcttgtt 7041789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 12122958 - 12122921
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  12122958 ctagcttatagcttgttggactagcttataagcttgtt 12122921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 22978101 - 22978138
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  22978101 ctagcttatagcttgttggactagcttataagcttgtt 22978138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 32111637 - 32111600
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  32111637 ctagcttatagcttgttggactagcttataagcttgtt 32111600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 34785955 - 34785918
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  34785955 ctagcttatagcttattggactagcttataagcttgtt 34785918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 36660213 - 36660176
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    ||||||||||| || |||||||||||||||||||||||    
T  36660213 ctagcttatagtttgttggattagcttataagcttgtt 36660176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 42167409 - 42167372
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  42167409 ctagcttatagcttgttggactagcttataagcttgtt 42167372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 42877262 - 42877299
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  42877262 ctagcttatagcttcttggactagcttataagcatgtt 42877299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 43860748 - 43860785
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  43860748 ctagcttatagcttgttggactagcttataagcttgtt 43860785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 48071998 - 48072035
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  48071998 ctagcttatagcttgttggactagcttataagcttgtt 48072035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 50935735 - 50935772
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  50935735 ctagcttatagcttattggactagcttataagcttgtt 50935772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 32390190 - 32390154
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgtt 267  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  32390190 tagcttatagcttgttggactagcttataagcttgtt 32390154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 41865309 - 41865355
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41865309 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 41865355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 2459723 - 2459677
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||    
T  2459723 ctagcttatagcttgttggattagcttataagcttattggatgaaaa 2459677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 46742478 - 46742524
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  46742478 ctagcttatagtttcttggattagattataagcttgttggatgaaaa 46742524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 38815626 - 38815579
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  38815626 ctagcttatagcttgttggattagcttataagctcgttagatgaaaat 38815579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 27747629 - 27747675
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  27747629 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 27747675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 46315765 - 46315719
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  46315765 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 46315719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 50586256 - 50586210
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  50586256 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 50586210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 2937359 - 2937406
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||||||| ||| ||||||||||||| ||||||||| |||||    
T  2937359 ctagcttatagcttgttgaattagcttataagtttgttggatcaaaat 2937406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 234 - 277
Target Start/End: Complemental strand, 9423128 - 9423085
Alignment:
Q  234 cttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||| ||| ||||||||||||||||||||||| |||||    
T  9423128 cttatagcttgttgaattagcttataagcttgttggatcaaaat 9423085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 11823606 - 11823652
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||| ||||||||| ||||||||||||||||||| ||| ||||||||    
T  11823606 ctagtttatagcttgttggattagcttataagctcgttagatgaaaa 11823652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 30358096 - 30358142
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  30358096 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 30358142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 38058771 - 38058817
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||| |||||||||| |||||||| ||||||    
T  38058771 ctagcttatagcttgttggactagcttataaccttgttggttgaaaa 38058817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 39325633 - 39325679
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  39325633 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 39325679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 276
Target Start/End: Complemental strand, 44278038 - 44277996
Alignment:
Q  234 cttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||    
T  44278038 cttatagcttgttggactagcttataagctagttggatgaaaa 44277996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 47326661 - 47326615
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||| || ||||||||||||||||||| ||| ||||||||    
T  47326661 ctagcttatagtttgttggattagcttataagctcgttagatgaaaa 47326615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 3796041 - 3796004
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  3796041 ctagcttatagcttgttggactagcttataagcttgtt 3796004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 4640170 - 4640133
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  4640170 ctagcttatagcttgttggactagcttataagcttgtt 4640133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 5698148 - 5698185
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  5698148 ctagcttatagcttgttggactagcttataagcttgtt 5698185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 14390444 - 14390481
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  14390444 ctagcttatagcttgttggactagcttataagcttgtt 14390481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 25365783 - 25365828
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||| || ||||| |||||||||| ||||||||||||    
T  25365783 tagcttatagcttgttagattaacttataagctcgttggatgaaaa 25365828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 31496632 - 31496669
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  31496632 ctagcttatagcttcttggactagcttataaacttgtt 31496669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 44110009 - 44109972
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  44110009 ctagcttatagcttgttggactagcttataagcttgtt 44109972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 44300021 - 44299984
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  44300021 ctagcttatagcttgttggactagcttataagcttgtt 44299984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 42097989 - 42097943
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  42097989 ctagcttatagcttcttggattagcttataagcttattggatgaaaa 42097943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 5774115 - 5774161
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  5774115 ctagtttatagcttgttggattagcttataagcttgttagatgaaaa 5774161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 6432192 - 6432238
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||||||    
T  6432192 ctagcttatagcttgttggactagcttataagctagttggatgaaaa 6432238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 11018109 - 11018063
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  11018109 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 11018063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 30523631 - 30523677
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  30523631 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 30523677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 34245268 - 34245314
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  34245268 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 34245314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 36936150 - 36936104
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  36936150 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 36936104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 39241238 - 39241192
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  39241238 ctagcttatagcttgttggattagcttataagctcgttagatgaaaa 39241192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 43496184 - 43496230
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  43496184 ctagcttatagcttgttgcattagcttataagctcgttggatgaaaa 43496230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 276
Target Start/End: Original strand, 43568389 - 43568431
Alignment:
Q  234 cttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  43568389 cttatagcttgttggattagcttataagctcgttggatgaaaa 43568431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 3147470 - 3147516
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    ||||||||| ||| || ||||||||||||||||| ||||||||||||    
T  3147470 tagcttataacttgttagattagcttataagcttcttggatgaaaat 3147516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 10361415 - 10361461
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||| |||||||||||||  |||||||||||    
T  10361415 ctagcttatagcttgttggactagcttataagctcattggatgaaaa 10361461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 12160991 - 12160945
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  12160991 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 12160945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 16496693 - 16496647
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||| ||||||||| ||| ||||||||    
T  16496693 ctagcttatagcttgttggattagtttataagctcgttagatgaaaa 16496647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 28014487 - 28014533
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||| ||||||||||||| ||||||||| ||||    
T  28014487 ctagcttatagcttattgaattagcttataagtttgttggatcaaaa 28014533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 38324260 - 38324306
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||| ||||||||||||||| ||| ||||||||    
T  38324260 ctagcttatagcttgttgaattagcttataagctcgttagatgaaaa 38324306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 42519736 - 42519782
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||| ||||||||||||||| ||| ||||||||    
T  42519736 ctagcttatagcttgttgcattagcttataagctcgttagatgaaaa 42519782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 45376931 - 45376977
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||| ||||||||| ||||| ||||||||||||| ||||||||||||    
T  45376931 ctagtttatagcttgttggactagcttataagctagttggatgaaaa 45376977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 8875696 - 8875741
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||| ||| ||||||||||||||||||| ||| ||||||||    
T  8875696 tagcttataacttgttggattagcttataagctcgttagatgaaaa 8875741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 14452322 - 14452359
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  14452322 ctagcttatagcttgttggactagcttataagcttgtt 14452359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 18109792 - 18109755
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  18109792 ctagcttatagcttgttggactagcttataagcttgtt 18109755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 33178983 - 33179020
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  33178983 ctagcttatagcttgttggactagcttataagcttgtt 33179020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 36600959 - 36600996
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  36600959 ctagcttatagcttgttggactagcttataagcttgtt 36600996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 7454556 - 7454600
Alignment:
Q  232 agcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||| ||||||||||||||||||| ||| || |||||    
T  7454556 agcttatagcttgttggattagcttataagctcgttagaagaaaa 7454600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 15265417 - 15265381
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgtt 267  Q
    ||||||||||||||||||  |||||||||||||||||    
T  15265417 tagcttatagcttcttgggctagcttataagcttgtt 15265381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 25023532 - 25023486
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  25023532 ctagcttatagcttgttggattagcttataagcttgttagatgaaaa 25023486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 21459044 - 21459090
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||    
T  21459044 ctagcttatagcttgttagattagcttataagctcgttggatgaaaa 21459090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Original strand, 20645680 - 20645727
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    ||||||||||| || ||||||||||||||||||| ||| |||||||||    
T  20645680 ctagcttatagtttgttggattagcttataagctcgttagatgaaaat 20645727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 13756397 - 13756351
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||| ||||||||| ||||||||||||||||||| ||| ||||||||    
T  13756397 ctagtttatagcttgttggattagcttataagctcgttagatgaaaa 13756351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 21860256 - 21860302
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  21860256 ctagcttatagcttgttggattagcttataagctcgttagacgaaaa 21860302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 22707313 - 22707359
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||| ||||||||| ||| ||||||||    
T  22707313 ctagcttatagcttgttggattagtttataagctcgttagatgaaaa 22707359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 24119316 - 24119270
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||    
T  24119316 ctagcttatagcttgttggattagcttataagctcgttagaagaaaa 24119270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 1789809 - 1789846
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  1789809 ctagcttatagcttgttggactagcttataagcttgtt 1789846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 5090161 - 5090124
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  5090161 ctagcttatagcttcttggactagcttataagtttgtt 5090124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Original strand, 12130504 - 12130549
Alignment:
Q  231 tagcttatagcttcttggattagcttataagcttgttggatgaaaa 276  Q
    ||||||||||||| ||||||||||||||||  ||||| ||||||||    
T  12130504 tagcttatagcttgttggattagcttataaatttgttagatgaaaa 12130549  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 18368811 - 18368774
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  18368811 ctagcttatagcttgttggactagcttataagcttgtt 18368774  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 57926 - 57879
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    |||||||||||||| ||||||||||||||||||| ||| || ||||||    
T  57926 ctagcttatagcttgttggattagcttataagctcgttagacgaaaat 57879  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 157692 - 157645
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgttggatgaaaat 277  Q
    ||||||||||| || || |||||||||||||||| |||||||||||||    
T  157692 ctagcttatagtttgttagattagcttataagctcgttggatgaaaat 157645  T

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Target: scaffold0115 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 4171 - 4208
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  4171 ctagcttatagcttgttggactagcttataagcttgtt 4208  T

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Target: scaffold0115; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 11911 - 11948
Alignment:
Q  230 ctagcttatagcttcttggattagcttataagcttgtt 267  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  11911 ctagcttatagcttgttggactagcttataagcttgtt 11948  T

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