View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18727_high_36 (Length: 250)
Name: NF18727_high_36
Description: NF18727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18727_high_36 |
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Alignment Details
Target: chr2 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 41329123 - 41328882
Alignment:
| Q |
1 |
ttaaattatggaatgcaatttcatatagttacgggaggcatttgcttattgatttgaattgttcaattattagccacacatacaaaccccacaatcaatg |
100 |
Q |
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| T |
41329123 |
ttaaattatgcaatgcaatttcatatagttacgggaggcatttgcttattgatttgaattgttcaattattagccacacatacaaaccccacaatcaatg |
41329024 |
T |
|
| Q |
101 |
tgtcatattacaaacatatagacatgtataattgcacatgcaacctatcactaattagattcccacaccaacaatcgctttctttctaataattgtcgtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41329023 |
tgtcatattacaaacatatagacatgtataattgcacatgcaacctatcactaattagattcccacaccaacaatcgctttctttctaataattgtcgtc |
41328924 |
T |
|
| Q |
201 |
atcatcatcacaatcctaaaatatttgtaccatcttcttctc |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
41328923 |
atcatcatcacaatcctaaaatatttgtaccatcttcttctc |
41328882 |
T |
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