View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18727_high_38 (Length: 245)

Name: NF18727_high_38
Description: NF18727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18727_high_38
NF18727_high_38
[»] chr1 (29 HSPs)
chr1 (60-174)||(5456615-5456731)
chr1 (157-244)||(5456516-5456603)
chr1 (18-55)||(38058746-38058783)
chr1 (18-59)||(44502554-44502595)
chr1 (18-58)||(14390416-14390456)
chr1 (18-58)||(27747601-27747641)
chr1 (18-52)||(2459711-2459745)
chr1 (18-52)||(3796029-3796063)
chr1 (18-52)||(5698126-5698160)
chr1 (18-52)||(5698508-5698542)
chr1 (18-56)||(11823580-11823618)
chr1 (18-52)||(30358074-30358108)
chr1 (18-52)||(30899487-30899521)
chr1 (18-52)||(39325611-39325645)
chr1 (18-52)||(41865287-41865321)
chr1 (18-52)||(50586244-50586278)
chr1 (18-59)||(38815614-38815655)
chr1 (18-58)||(9223834-9223874)
chr1 (18-57)||(35179815-35179854)
chr1 (20-58)||(11332836-11332874)
chr1 (20-58)||(11490857-11490895)
chr1 (21-55)||(12014639-12014673)
chr1 (18-52)||(31656369-31656403)
chr1 (18-55)||(4640158-4640195)
chr1 (18-55)||(29092599-29092636)
chr1 (18-55)||(42159609-42159646)
chr1 (18-58)||(28955620-28955660)
chr1 (20-56)||(33076601-33076637)
chr1 (20-52)||(47326651-47326683)
[»] chr4 (31 HSPs)
chr4 (18-63)||(39840260-39840305)
chr4 (18-60)||(7141187-7141229)
chr4 (18-59)||(2390335-2390376)
chr4 (18-58)||(19912667-19912707)
chr4 (18-58)||(24152670-24152710)
chr4 (18-57)||(19801928-19801967)
chr4 (18-52)||(202290-202324)
chr4 (18-52)||(6238188-6238222)
chr4 (18-52)||(30411317-30411351)
chr4 (18-52)||(33984088-33984122)
chr4 (18-52)||(45549653-45549687)
chr4 (18-52)||(49335256-49335290)
chr4 (18-52)||(53284007-53284041)
chr4 (21-58)||(318740-318777)
chr4 (18-51)||(37114499-37114532)
chr4 (18-59)||(55610656-55610697)
chr4 (22-58)||(30653360-30653396)
chr4 (21-52)||(318462-318493)
chr4 (20-59)||(2943719-2943757)
chr4 (21-56)||(40674743-40674778)
chr4 (18-52)||(6287837-6287871)
chr4 (18-52)||(7113580-7113614)
chr4 (28-62)||(25686976-25687010)
chr4 (18-52)||(43374595-43374629)
chr4 (18-52)||(44448447-44448481)
chr4 (18-52)||(55001809-55001843)
chr4 (21-58)||(30996710-30996747)
chr4 (20-52)||(36181437-36181469)
chr4 (18-58)||(45561381-45561420)
chr4 (18-58)||(51924020-51924060)
chr4 (18-58)||(53431624-53431664)
[»] chr5 (29 HSPs)
chr5 (18-58)||(36959460-36959500)
chr5 (18-56)||(11575618-11575656)
chr5 (18-58)||(1923941-1923981)
chr5 (18-58)||(36944305-36944345)
chr5 (18-57)||(34589991-34590030)
chr5 (18-57)||(37530810-37530849)
chr5 (18-52)||(6789679-6789713)
chr5 (18-52)||(7157563-7157597)
chr5 (18-52)||(15498645-15498679)
chr5 (18-52)||(24171365-24171399)
chr5 (18-52)||(27813066-27813100)
chr5 (18-52)||(29525386-29525420)
chr5 (18-52)||(41734334-41734368)
chr5 (18-52)||(42709311-42709345)
chr5 (18-55)||(76411-76448)
chr5 (18-55)||(3033390-3033427)
chr5 (18-59)||(4559545-4559586)
chr5 (20-52)||(10815063-10815095)
chr5 (20-52)||(12280781-12280813)
chr5 (18-50)||(16218373-16218405)
chr5 (20-52)||(36761062-36761094)
chr5 (21-52)||(7948486-7948517)
chr5 (21-52)||(13018994-13019025)
chr5 (18-57)||(35766554-35766593)
chr5 (18-52)||(11784258-11784292)
chr5 (18-52)||(42422807-42422841)
chr5 (21-58)||(12939950-12939987)
chr5 (21-58)||(12953900-12953937)
chr5 (21-58)||(23590633-23590670)
[»] chr8 (30 HSPs)
chr8 (18-56)||(3512467-3512505)
chr8 (18-56)||(35160335-35160373)
chr8 (18-58)||(2773648-2773688)
chr8 (18-58)||(43800834-43800874)
chr8 (20-59)||(35253097-35253136)
chr8 (18-57)||(43150247-43150286)
chr8 (18-52)||(12208806-12208840)
chr8 (18-52)||(12453234-12453268)
chr8 (18-52)||(18146342-18146376)
chr8 (18-56)||(22215107-22215145)
chr8 (18-52)||(25100280-25100314)
chr8 (18-52)||(40529501-40529535)
chr8 (18-52)||(45069884-45069918)
chr8 (18-52)||(45237858-45237892)
chr8 (21-58)||(45237032-45237069)
chr8 (21-57)||(25099408-25099444)
chr8 (21-57)||(39733721-39733757)
chr8 (18-56)||(38747022-38747061)
chr8 (18-52)||(4477684-4477718)
chr8 (18-52)||(24804552-24804586)
chr8 (21-58)||(4601038-4601075)
chr8 (18-55)||(31642814-31642851)
chr8 (18-47)||(42803469-42803498)
chr8 (18-59)||(43873951-43873992)
chr8 (21-54)||(44338763-44338796)
chr8 (18-58)||(53535-53575)
chr8 (20-52)||(5574602-5574634)
chr8 (18-58)||(20697571-20697611)
chr8 (20-56)||(34618775-34618811)
chr8 (18-58)||(35057366-35057406)
[»] chr7 (35 HSPs)
chr7 (18-56)||(6476922-6476960)
chr7 (18-55)||(28958187-28958224)
chr7 (20-56)||(4060348-4060384)
chr7 (18-58)||(31436312-31436352)
chr7 (18-58)||(35670419-35670459)
chr7 (18-57)||(28494341-28494380)
chr7 (18-57)||(35747020-35747059)
chr7 (18-57)||(46349949-46349988)
chr7 (18-52)||(27826709-27826743)
chr7 (18-52)||(30582671-30582705)
chr7 (18-56)||(35647412-35647450)
chr7 (18-52)||(37658180-37658214)
chr7 (18-52)||(40061163-40061197)
chr7 (18-52)||(42329088-42329122)
chr7 (18-52)||(43156568-43156602)
chr7 (18-52)||(46534408-46534442)
chr7 (18-57)||(31031959-31031998)
chr7 (21-56)||(43158261-43158296)
chr7 (18-52)||(21920861-21920895)
chr7 (18-56)||(36121427-36121465)
chr7 (18-52)||(38224588-38224622)
chr7 (18-52)||(42265338-42265372)
chr7 (18-52)||(43337633-43337667)
chr7 (18-52)||(44570932-44570966)
chr7 (18-52)||(46350901-46350935)
chr7 (18-52)||(46536122-46536156)
chr7 (21-59)||(46672499-46672537)
chr7 (18-59)||(35670467-35670508)
chr7 (18-55)||(38224639-38224676)
chr7 (18-51)||(48935236-48935269)
chr7 (20-52)||(981337-981369)
chr7 (20-52)||(31969533-31969565)
chr7 (20-48)||(39870088-39870116)
chr7 (20-52)||(44104643-44104675)
chr7 (21-57)||(44818716-44818752)
[»] chr3 (32 HSPs)
chr3 (18-56)||(32111625-32111663)
chr3 (18-59)||(34436040-34436081)
chr3 (18-58)||(19274724-19274764)
chr3 (18-52)||(8321496-8321530)
chr3 (20-58)||(12055582-12055620)
chr3 (18-52)||(12122946-12122980)
chr3 (18-52)||(41991749-41991783)
chr3 (18-55)||(2557967-2558004)
chr3 (18-55)||(39129371-39129408)
chr3 (20-57)||(40980207-40980244)
chr3 (18-58)||(12764665-12764705)
chr3 (18-58)||(17666796-17666836)
chr3 (21-52)||(5505932-5505963)
chr3 (20-63)||(36660203-36660246)
chr3 (18-57)||(45355125-45355164)
chr3 (18-57)||(46668336-46668375)
chr3 (20-50)||(8879366-8879396)
chr3 (18-52)||(13353416-13353450)
chr3 (18-52)||(32999722-32999756)
chr3 (18-52)||(40374573-40374607)
chr3 (21-55)||(43359350-43359384)
chr3 (21-59)||(49918248-49918286)
chr3 (18-52)||(51062910-51062944)
chr3 (18-52)||(52184892-52184926)
chr3 (18-55)||(42167397-42167434)
chr3 (18-51)||(42528121-42528154)
chr3 (18-51)||(46114989-46115022)
chr3 (18-55)||(50935710-50935747)
chr3 (18-50)||(25999234-25999266)
chr3 (20-52)||(30318011-30318043)
chr3 (20-52)||(48747404-48747436)
chr3 (20-52)||(52959292-52959324)
[»] chr2 (23 HSPs)
chr2 (18-60)||(12160979-12161021)
chr2 (18-56)||(42519710-42519748)
chr2 (18-58)||(10361387-10361427)
chr2 (18-58)||(16496681-16496721)
chr2 (18-52)||(11018097-11018131)
chr2 (18-52)||(30523609-30523643)
chr2 (18-52)||(39241226-39241260)
chr2 (18-52)||(42097977-42098011)
chr2 (20-57)||(7183349-7183386)
chr2 (18-51)||(18109780-18109813)
chr2 (18-55)||(38928555-38928592)
chr2 (18-58)||(1086037-1086077)
chr2 (20-52)||(1876100-1876132)
chr2 (20-56)||(18239335-18239371)
chr2 (18-58)||(34245240-34245280)
chr2 (21-56)||(8875669-8875704)
chr2 (20-58)||(35422037-35422075)
chr2 (18-55)||(6322205-6322242)
chr2 (18-55)||(11447237-11447274)
chr2 (18-51)||(36936138-36936171)
chr2 (18-59)||(39532055-39532096)
chr2 (21-57)||(8341223-8341259)
chr2 (20-52)||(10247450-10247482)
[»] scaffold0076 (1 HSPs)
scaffold0076 (20-57)||(14258-14295)
[»] chr6 (14 HSPs)
chr6 (18-59)||(18368799-18368840)
chr6 (18-59)||(24119304-24119345)
chr6 (18-58)||(22707285-22707325)
chr6 (18-52)||(1789787-1789821)
chr6 (18-52)||(18801700-18801734)
chr6 (19-61)||(21778152-21778194)
chr6 (20-57)||(20645653-20645690)
chr6 (18-55)||(21860231-21860268)
chr6 (18-50)||(25023520-25023552)
chr6 (18-53)||(13866263-13866298)
chr6 (18-52)||(12130481-12130515)
chr6 (19-52)||(4976524-4976557)
chr6 (20-57)||(20992332-20992369)
chr6 (18-55)||(32562476-32562513)
[»] scaffold0115 (2 HSPs)
scaffold0115 (18-58)||(4143-4183)
scaffold0115 (18-58)||(11883-11923)
[»] scaffold0330 (1 HSPs)
scaffold0330 (20-59)||(6984-7023)
[»] scaffold0060 (1 HSPs)
scaffold0060 (18-52)||(57914-57948)
[»] scaffold0007 (1 HSPs)
scaffold0007 (20-56)||(157682-157718)


Alignment Details
Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 60 - 174
Target Start/End: Complemental strand, 5456731 - 5456615
Alignment:
Q  60 agtataaattattatttttcaagaactcttttattctagtgaaataag-ttataagatagagtatcattaaaag-aacttatgtttttataacaaggaaa 157  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  5456731 agtataaattattatttttcaagaacccttttattctagtgaaataagtttataagatagagtatctttaaaagaaacttatgtttttataacaaggaaa 5456632  T
Q  158 aatcaactgcattcaac 174  Q
    |||||||||||||||||    
T  5456631 aatcaactgcattcaac 5456615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 5456603 - 5456516
Alignment:
Q  157 aaatcaactgcattcaacnnnnnnncttgttttcatgttgtaggtacgaaatttccgttaaggtttaacactgattcatctcactcga 244  Q
    ||||||||||||||||||       |||||||||||||||||||||| ||||||||||||| |||||||| ||| | |||||| ||||    
T  5456603 aaatcaactgcattcaactttttttcttgttttcatgttgtaggtacaaaatttccgttaacgtttaacagtgacttatctcagtcga 5456516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 38058783 - 38058746
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38058783 agctataagctagcttttttgtgttaccaaacacaacc 38058746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 44502595 - 44502554
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  44502595 agctataagctagcttttttatgttaccaaacacaacctaag 44502554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 14390456 - 14390416
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  14390456 agctataagctagcttttttgtgttaccaaacacagcctaa 14390416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 27747641 - 27747601
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  27747641 agctataagctagcttttttgtgttaccaaacacagcctaa 27747601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 2459711 - 2459745
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  2459711 agctataagctagcttttttgtgttaccaaacaca 2459745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 3796029 - 3796063
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  3796029 agctataagctagcttttttgtgttaccaaacaca 3796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 5698160 - 5698126
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  5698160 agctataagctagcttttttgtgttaccaaacaca 5698126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 5698542 - 5698508
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  5698542 agctataagctagcttttttgtgttaccaaacaca 5698508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 11823618 - 11823580
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacct 56  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  11823618 agctataaactagcttttttgtgttaccaaacacaacct 11823580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 30358108 - 30358074
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  30358108 agctataagctagcttttttgtgttaccaaacaca 30358074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 30899487 - 30899521
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  30899487 agctataagctagcttttttgtgttaccaaacaca 30899521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 39325645 - 39325611
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  39325645 agctataagctagcttttttgtgttaccaaacaca 39325611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 41865321 - 41865287
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  41865321 agctataagctagcttttttgtgttaccaaacaca 41865287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 50586244 - 50586278
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  50586244 agctataagctagcttttttgtgttaccaaacaca 50586278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 38815614 - 38815655
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  38815614 agctataagctagcttttttgtgttaccaaatacagcctaag 38815655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 9223874 - 9223834
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||| ||||||||||||||||||||||||| |||||    
T  9223874 agctataagttagcttttttgtgttaccaaacacagcctaa 9223834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 35179854 - 35179815
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  35179854 agctataagctagcttttttatgttaccaaacacagccta 35179815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 11332874 - 11332836
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  11332874 ctataaactagcttttttgtgttaccaaacacagcctaa 11332836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 11490895 - 11490857
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  11490895 ctataaactagcttttttgtgttaccaaacacagcctaa 11490857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 12014673 - 12014639
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacc 55  Q
    ||||||||| |||||||||||||||||||||||||    
T  12014673 tataagctaacttttttgtgttaccaaacacaacc 12014639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 31656403 - 31656369
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||| ||||||||||||||||||||||||||    
T  31656403 agctataaactagcttttttgtgttaccaaacaca 31656369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 4640158 - 4640195
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    |||||||||||||||| || ||||||||||||||||||    
T  4640158 agctataagctagcttattcgtgttaccaaacacaacc 4640195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 29092636 - 29092599
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  29092636 agctatgagctaacttttttgtgttaccaaacacaacc 29092599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 42159646 - 42159609
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    |||||||||||||||| || ||||||||||||||||||    
T  42159646 agctataagctagcttattcgtgttaccaaacacaacc 42159609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 28955620 - 28955660
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||| |||||||||| |||||||||||||| |||||    
T  28955620 agctataagttagcttttttatgttaccaaacacagcctaa 28955660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 33076637 - 33076601
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaacct 56  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  33076637 ctataagctagcttatttatgttaccaaacacaacct 33076601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 47326651 - 47326683
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    ||||||||||||||||||| |||||||||||||    
T  47326651 ctataagctagcttttttgggttaccaaacaca 47326683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 39840260 - 39840305
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaagagta 63  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  39840260 agctataagctagcttttttgtgttaccaaacacaacctaaaagta 39840305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 7141187 - 7141229
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaaga 60  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  7141187 agctataagctagcttttttgtgttaccaaacacagcctaaga 7141229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 2390335 - 2390376
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  2390335 agctataagctagcttttttgtgttaccaaacacagcctaag 2390376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 19912707 - 19912667
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  19912707 agctataagctagcttttttgtgttaccaaacacagcctaa 19912667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 24152710 - 24152670
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  24152710 agctataagctagcttatttgtgttaccaaacacaacctaa 24152670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 19801928 - 19801967
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  19801928 agctataagctagcttttttgtgttaccaaacacagccta 19801967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 202324 - 202290
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  202324 agctataagctagcttttttgtgttaccaaacaca 202290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 6238222 - 6238188
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  6238222 agctataagctagcttttttgtgttaccaaacaca 6238188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 30411317 - 30411351
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  30411317 agctataagctagcttttttgtgttaccaaacaca 30411351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 33984122 - 33984088
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  33984122 agctataagctagcttttttgtgttaccaaacaca 33984088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 45549687 - 45549653
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  45549687 agctataagctagcttttttgtgttaccaaacaca 45549653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 49335256 - 49335290
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  49335256 agctataagctagcttttttgtgttaccaaacaca 49335290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 53284041 - 53284007
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  53284041 agctataagctagcttttttgtgttaccaaacaca 53284007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 318740 - 318777
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  318740 tataagctagcttatttgtgttaccaaacacaacctaa 318777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 37114499 - 37114532
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacac 51  Q
    ||||||||||||||||||||||||||||||||||    
T  37114499 agctataagctagcttttttgtgttaccaaacac 37114532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 55610697 - 55610656
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  55610697 agctataagctagtttttttgtgttaccaaacacagcctaag 55610656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 30653360 - 30653396
Alignment:
Q  22 ataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||| ||||||||||||||||||||||||||||    
T  30653360 ataagctaacttttttgtgttaccaaacacaacctaa 30653396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 52
Target Start/End: Original strand, 318462 - 318493
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacaca 52  Q
    ||||||||||||||||||||||||||||||||    
T  318462 tataagctagcttttttgtgttaccaaacaca 318493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 2943719 - 2943757
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  2943719 ctataagctag-ttttttgtgttaccaaacacaacctaag 2943757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 40674778 - 40674743
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacct 56  Q
    ||||||||| ||||||||||||||||||||||||||    
T  40674778 tataagctaacttttttgtgttaccaaacacaacct 40674743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 6287871 - 6287837
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||| ||||||||||||||||||||||    
T  6287871 agctataagctaacttttttgtgttaccaaacaca 6287837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 7113580 - 7113614
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||| ||||||||||||||    
T  7113580 agctataagctagcttttttatgttaccaaacaca 7113614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 25687010 - 25686976
Alignment:
Q  28 tagcttttttgtgttaccaaacacaacctaagagt 62  Q
    ||||||||||||||||||||||||| |||||||||    
T  25687010 tagcttttttgtgttaccaaacacagcctaagagt 25686976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 43374629 - 43374595
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||| ||||||||||||||||||||    
T  43374629 agctataagctagcatttttgtgttaccaaacaca 43374595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 44448481 - 44448447
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    ||||||||| |||||||||||||||||||||||||    
T  44448481 agctataagttagcttttttgtgttaccaaacaca 44448447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 55001809 - 55001843
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    ||||||||||||| |||||||||||||||||||||    
T  55001809 agctataagctagtttttttgtgttaccaaacaca 55001843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 30996710 - 30996747
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  30996710 tataaactagcttatttgtgttaccaaacacaacctaa 30996747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 36181437 - 36181469
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    ||||||| |||||||||||||||||||||||||    
T  36181437 ctataagttagcttttttgtgttaccaaacaca 36181469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 45561381 - 45561420
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  45561381 agctataagctagctttt-tgtgttaccaaacacagcctaa 45561420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 51924060 - 51924020
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||| |||| |||||||||||||||||||||| ||||    
T  51924060 agctataaactagtttttttgtgttaccaaacacaagctaa 51924020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 53431664 - 53431624
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||  ||||||||||||||||||||| |||||    
T  53431664 agctataagctacattttttgtgttaccaaacacagcctaa 53431624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 36959500 - 36959460
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36959500 agctataagctagcttttttgtgttaccaaacacaacctaa 36959460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 11575656 - 11575618
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacct 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11575656 agctataagctagcttttttgtgttaccaaacacaacct 11575618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 1923981 - 1923941
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  1923981 agctataagctagcttttttgtgttaccaaacacagcctaa 1923941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 36944305 - 36944345
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  36944305 agctataagctagcttttttatgttaccaaacacaacctaa 36944345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 34589991 - 34590030
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  34589991 agctataagctagcttttttgtgttaccaaacacagccta 34590030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 37530810 - 37530849
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  37530810 agctataagctagcttttttgtgttaccaaacacagccta 37530849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 6789679 - 6789713
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  6789679 agctataagctagcttttttgtgttaccaaacaca 6789713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 7157563 - 7157597
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  7157563 agctataagctagcttttttgtgttaccaaacaca 7157597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 15498679 - 15498645
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  15498679 agctataagctagcttttttgtgttaccaaacaca 15498645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 24171399 - 24171365
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  24171399 agctataagctagcttttttgtgttaccaaacaca 24171365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 27813066 - 27813100
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  27813066 agctataagctagcttttttgtgttaccaaacaca 27813100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 29525386 - 29525420
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  29525386 agctataagctagcttttttgtgttaccaaacaca 29525420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 41734334 - 41734368
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  41734334 agctataagctagcttttttgtgttaccaaacaca 41734368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 42709345 - 42709311
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  42709345 agctataagctagcttttttgtgttaccaaacaca 42709311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 76448 - 76411
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    |||||||||||||||||||||||||| |||||||||||    
T  76448 agctataagctagcttttttgtgttatcaaacacaacc 76411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 3033427 - 3033390
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  3033427 agctataagctagcttttttatgttaccaaacacaacc 3033390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 4559545 - 4559586
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  4559545 agctataagctagcttttttatgttaccaaacacagcctaag 4559586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 10815095 - 10815063
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||    
T  10815095 ctataagctagcttttttgtgttaccaaacaca 10815063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 12280813 - 12280781
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||    
T  12280813 ctataagctagcttttttgtgttaccaaacaca 12280781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 16218373 - 16218405
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaaca 50  Q
    |||||||||||||||||||||||||||||||||    
T  16218373 agctataagctagcttttttgtgttaccaaaca 16218405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 36761094 - 36761062
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||    
T  36761094 ctataagctagcttttttgtgttaccaaacaca 36761062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 52
Target Start/End: Original strand, 7948486 - 7948517
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacaca 52  Q
    ||||||||||||||||||||||||||||||||    
T  7948486 tataagctagcttttttgtgttaccaaacaca 7948517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 52
Target Start/End: Complemental strand, 13019025 - 13018994
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacaca 52  Q
    ||||||||||||||||||||||||||||||||    
T  13019025 tataagctagcttttttgtgttaccaaacaca 13018994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 35766593 - 35766554
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  35766593 agctataagctagcttttttgtattatcaaacacaaccta 35766554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 11784258 - 11784292
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||| ||||||||||||||    
T  11784258 agctataagctagcttttttatgttaccaaacaca 11784292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 42422841 - 42422807
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||| ||||||||||||||||||||||||||    
T  42422841 agctataaactagcttttttgtgttaccaaacaca 42422807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 12939950 - 12939987
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  12939950 tataagctagcttttttgtgttaccaaatacagcctaa 12939987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 12953900 - 12953937
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  12953900 tataagctagcttttttgtgttaccaaatacagcctaa 12953937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 23590670 - 23590633
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  23590670 tataaactatcttttttgtgttaccaaacacaacctaa 23590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 3512505 - 3512467
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacct 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3512505 agctataagctagcttttttgtgttaccaaacacaacct 3512467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 35160335 - 35160373
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacct 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35160335 agctataagctagcttttttgtgttaccaaacacaacct 35160373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 2773648 - 2773688
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  2773648 agctataagctagcttttttgtgttaccaaacacagcctaa 2773688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 43800834 - 43800874
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  43800834 agctataagctagcttttttgtgttaccaaacacagcctaa 43800874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 35253097 - 35253136
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  35253097 ctataagctagcttgtttgtgttaccaaacacaacctaag 35253136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 43150286 - 43150247
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  43150286 agctataagctagcttttttgtgttaccaaacacagccta 43150247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 12208840 - 12208806
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  12208840 agctataagctagcttttttgtgttaccaaacaca 12208806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 12453268 - 12453234
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  12453268 agctataagctagcttttttgtgttaccaaacaca 12453234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 18146376 - 18146342
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  18146376 agctataagctagcttttttgtgttaccaaacaca 18146342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 22215145 - 22215107
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacct 56  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  22215145 agctataagctaacttttttgtgttaccaaacacaacct 22215107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 25100280 - 25100314
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  25100280 agctataagctagcttttttgtgttaccaaacaca 25100314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 40529535 - 40529501
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  40529535 agctataagctagcttttttgtgttaccaaacaca 40529501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 45069884 - 45069918
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  45069884 agctataagctagcttttttgtgttaccaaacaca 45069918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 45237858 - 45237892
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  45237858 agctataagctagcttttttgtgttaccaaacaca 45237892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 45237032 - 45237069
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  45237032 tataagctagcttttttgtgttatcaaacacaacctaa 45237069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 25099444 - 25099408
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaaccta 57  Q
    |||||||||||||||||||||||||||||||| ||||    
T  25099444 tataagctagcttttttgtgttaccaaacacagccta 25099408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 39733757 - 39733721
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaaccta 57  Q
    |||||||||||||||||||||||||||||||| ||||    
T  39733757 tataagctagcttttttgtgttaccaaacacagccta 39733721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 38747022 - 38747061
Alignment:
Q  18 agctataagctagctttt-ttgtgttaccaaacacaacct 56  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  38747022 agctataagctagctttttttgtgttaccaaacacaacct 38747061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 4477684 - 4477718
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||| ||||||||||||||||||||||    
T  4477684 agctataagctaacttttttgtgttaccaaacaca 4477718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 24804552 - 24804586
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||| ||||||    
T  24804552 agctataagctagcttttttgtgttaccgaacaca 24804586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 4601038 - 4601075
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  4601038 tataagctagcttatttgtgttatcaaacacaacctaa 4601075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 31642814 - 31642851
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    |||||||||||||||| || ||||||||||||||||||    
T  31642814 agctataagctagcttattcgtgttaccaaacacaacc 31642851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 42803498 - 42803469
Alignment:
Q  18 agctataagctagcttttttgtgttaccaa 47  Q
    ||||||||||||||||||||||||||||||    
T  42803498 agctataagctagcttttttgtgttaccaa 42803469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 43873992 - 43873951
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    |||||||| |||||||||||||| ||||||||||| ||||||    
T  43873992 agctataaactagcttttttgtggtaccaaacacagcctaag 43873951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 44338796 - 44338763
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaac 54  Q
    ||||||||||||| ||||||||||||||||||||    
T  44338796 tataagctagcttatttgtgttaccaaacacaac 44338763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 53535 - 53575
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||||||||||| |||||||||| ||||||| |||||    
T  53535 agctataagctagcttatttgtgttacaaaacacagcctaa 53575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 5574634 - 5574602
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||| ||||||||||||||||||||||    
T  5574634 ctataagctaacttttttgtgttaccaaacaca 5574602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 20697571 - 20697611
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||||||| ||||||||| |||||||||||| |||||    
T  20697571 agctataagctaacttttttgtattaccaaacacagcctaa 20697611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 34618775 - 34618811
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaacct 56  Q
    ||||||| || ||||||||||||||||||||||||||    
T  34618775 ctataagttaacttttttgtgttaccaaacacaacct 34618811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 35057366 - 35057406
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||||||| ||| ||| ||||||||||||||||||||    
T  35057366 agctataagctatcttatttatgttaccaaacacaacctaa 35057406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 6476960 - 6476922
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacct 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6476960 agctataagctagcttttttgtgttaccaaacacaacct 6476922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 28958187 - 28958224
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28958187 agctataagctagcttttttgtgttaccaaacacaacc 28958224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 4060384 - 4060348
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaacct 56  Q
    |||||||||||||||||||||||||||||||||||||    
T  4060384 ctataagctagcttttttgtgttaccaaacacaacct 4060348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 31436312 - 31436352
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  31436312 agctataagctagcttttttgtgttacgaaacacaacctaa 31436352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 35670419 - 35670459
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  35670419 agctataagctagcttttttgtgttaccaaacacagcctaa 35670459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 28494341 - 28494380
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  28494341 agctataagctagcttttttgtgttaccaaacacagccta 28494380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 35747059 - 35747020
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  35747059 agctataagctagcttttttgtgttaccaaacacagccta 35747020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 46349949 - 46349988
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  46349949 agctataagctagcttttttgtgttaccaaacacagccta 46349988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 27826743 - 27826709
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  27826743 agctataagctagcttttttgtgttaccaaacaca 27826709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 30582705 - 30582671
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  30582705 agctataagctagcttttttgtgttaccaaacaca 30582671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 35647450 - 35647412
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacct 56  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  35647450 agctataagctagcttttttgtgttaccaaacagaacct 35647412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 37658180 - 37658214
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  37658180 agctataagctagcttttttgtgttaccaaacaca 37658214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 40061197 - 40061163
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  40061197 agctataagctagcttttttgtgttaccaaacaca 40061163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 42329088 - 42329122
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  42329088 agctataagctagcttttttgtgttaccaaacaca 42329122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 43156602 - 43156568
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  43156602 agctataagctagcttttttgtgttaccaaacaca 43156568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 46534442 - 46534408
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  46534442 agctataagctagcttttttgtgttaccaaacaca 46534408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 31031959 - 31031998
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  31031959 agctataaactagcttttttgtgttaccaaacacagccta 31031998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 43158261 - 43158296
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacct 56  Q
    ||||||||| ||||||||||||||||||||||||||    
T  43158261 tataagctaacttttttgtgttaccaaacacaacct 43158296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 21920861 - 21920895
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||| ||||||||||||||||||    
T  21920861 agctataagctagcttatttgtgttaccaaacaca 21920895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 36121465 - 36121427
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacct 56  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  36121465 agctataagctatcttctttgtgttaccaaacacaacct 36121427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 38224622 - 38224588
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||| ||||||||||||||||||    
T  38224622 agctataagctagcttatttgtgttaccaaacaca 38224588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 42265338 - 42265372
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    ||||||||||||||||||||| |||||||||||||    
T  42265338 agctataagctagcttttttgagttaccaaacaca 42265372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 43337667 - 43337633
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||| ||||||||||||||    
T  43337667 agctataagctagcttttttatgttaccaaacaca 43337633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 44570966 - 44570932
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||| ||||||||||||||||||||||    
T  44570966 agctataagctaacttttttgtgttaccaaacaca 44570932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 46350901 - 46350935
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||| ||||||||||||||||||||||    
T  46350901 agctataagctaacttttttgtgttaccaaacaca 46350935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 46536156 - 46536122
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    ||||| |||||||||||||||||||||||||||||    
T  46536156 agctacaagctagcttttttgtgttaccaaacaca 46536122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 46672537 - 46672499
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  46672537 tataagctagcttttttgtgttatcaaacacagcctaag 46672499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 35670467 - 35670508
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    |||||||||||||||| ||  |||||||||||||||||||||    
T  35670467 agctataagctagcttcttgttgttaccaaacacaacctaag 35670508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 38224676 - 38224639
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  38224676 agctacaagctagcttatttgtgttaccaaacacaacc 38224639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 48935269 - 48935236
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacac 51  Q
    |||||||||||||||| |||||||||||||||||    
T  48935269 agctataagctagcttatttgtgttaccaaacac 48935236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 981369 - 981337
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||| ||||||||||||||||||||||    
T  981369 ctataagctaacttttttgtgttaccaaacaca 981337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 31969533 - 31969565
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||| ||||||||||||||||||||||    
T  31969533 ctataagctaacttttttgtgttaccaaacaca 31969565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 48
Target Start/End: Original strand, 39870088 - 39870116
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaa 48  Q
    |||||||||||||||||||||||||||||    
T  39870088 ctataagctagcttttttgtgttaccaaa 39870116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 44104643 - 44104675
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||| ||||||||||||||    
T  44104643 ctataagctagcttttttttgttaccaaacaca 44104675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 44818752 - 44818716
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaaccta 57  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  44818752 tataagctagcttttttatgttaccaaacacagccta 44818716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 32111625 - 32111663
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacct 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32111625 agctataagctagcttttttgtgttaccaaacacaacct 32111663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 34436040 - 34436081
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  34436040 agctataagctagcttttttgtgttaccaaacacaccctaag 34436081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 19274764 - 19274724
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  19274764 agctataagctagcttttttgtgttaccaaacacagcctaa 19274724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 8321496 - 8321530
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  8321496 agctataagctagcttttttgtgttaccaaacaca 8321530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 12055582 - 12055620
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  12055582 ctataagctagcttttttgtgttaccaaacacagcctaa 12055620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 12122946 - 12122980
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  12122946 agctataagctagcttttttgtgttaccaaacaca 12122980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 41991749 - 41991783
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  41991749 agctataagctagcttttttgtgttaccaaacaca 41991783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 2557967 - 2558004
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  2557967 agctataagttagcttttttgtgttaccaaacacaacc 2558004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 39129408 - 39129371
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  39129408 agctataagctagcttttttatgttaccaaacacaacc 39129371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 40980207 - 40980244
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  40980207 ctataagctagtttttttgtgttaccaaacacaaccta 40980244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 12764705 - 12764665
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  12764705 agctataaactagcttttttgtgttaccaaacacagcctaa 12764665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 17666836 - 17666796
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  17666836 agctataagctagcttttttgggttaccaaacacagcctaa 17666796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 52
Target Start/End: Complemental strand, 5505963 - 5505932
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacaca 52  Q
    ||||||||||||||||||||||||||||||||    
T  5505963 tataagctagcttttttgtgttaccaaacaca 5505932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 36660203 - 36660246
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaacctaagagta 63  Q
    ||||||||||||||||||||||||||||||| | ||| ||||||    
T  36660203 ctataagctagcttttttgtgttaccaaacatagccttagagta 36660246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 45355164 - 45355125
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  45355164 agctataaactagcttttttgtgttaccaaacacagccta 45355125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 46668375 - 46668336
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  46668375 agctataagctagcttttttatgttaccaaacacagccta 46668336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 8879396 - 8879366
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaaca 50  Q
    |||||||||||||||||||||||||||||||    
T  8879396 ctataagctagcttttttgtgttaccaaaca 8879366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 13353450 - 13353416
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||| ||||||||||||||||||||||||||    
T  13353450 agctataaactagcttttttgtgttaccaaacaca 13353416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 32999722 - 32999756
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||| ||||||||    
T  32999722 agctataagctagcttttttgtgttatcaaacaca 32999756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 40374573 - 40374607
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    ||||||||| |||||||||||||||||||||||||    
T  40374573 agctataagttagcttttttgtgttaccaaacaca 40374607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 43359350 - 43359384
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacc 55  Q
    ||||||||||||| |||||||||||||||||||||    
T  43359350 tataagctagcttatttgtgttaccaaacacaacc 43359384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 49918286 - 49918248
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  49918286 tataagctaacttttttgtgttaccaaacacagcctaag 49918248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 51062944 - 51062910
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||| ||||||||    
T  51062944 agctataagctagcttttttgtgttaacaaacaca 51062910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 52184892 - 52184926
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||| ||||||||||||||||||||||    
T  52184892 agctataagctaacttttttgtgttaccaaacaca 52184926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 42167397 - 42167434
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    |||||||||||||||| || ||||||||||||||||||    
T  42167397 agctataagctagcttattcgtgttaccaaacacaacc 42167434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 42528121 - 42528154
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacac 51  Q
    |||||||||||||||||||||||||| |||||||    
T  42528121 agctataagctagcttttttgtgttatcaaacac 42528154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 46115022 - 46114989
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacac 51  Q
    |||||||||||||||| |||||||||||||||||    
T  46115022 agctataagctagcttatttgtgttaccaaacac 46114989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 50935747 - 50935710
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    |||||||||||||||| || ||||||||||||||||||    
T  50935747 agctataagctagcttattcgtgttaccaaacacaacc 50935710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 25999234 - 25999266
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaaca 50  Q
    |||||||||||| ||||||||||||||||||||    
T  25999234 agctataagctaacttttttgtgttaccaaaca 25999266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 30318011 - 30318043
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||| ||||||||||||||||||||    
T  30318011 ctataagctagcatttttgtgttaccaaacaca 30318043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 48747436 - 48747404
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||| ||||||||||||||||||||||    
T  48747436 ctataagctaacttttttgtgttaccaaacaca 48747404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 52959324 - 52959292
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||| ||||||||||||||||||    
T  52959324 ctataagctagcttatttgtgttaccaaacaca 52959292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 12160979 - 12161021
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaaga 60  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  12160979 agctataagctagcttttttgtgttaccaaacacagcctaaga 12161021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 42519748 - 42519710
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacct 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42519748 agctataagctagcttttttgtgttaccaaacacaacct 42519710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 10361427 - 10361387
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  10361427 agctataagctagcttttttgtgttaccaaacacagcctaa 10361387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 16496681 - 16496721
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  16496681 agctataagctagcttttttgtgttaccaaacacatcctaa 16496721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 11018097 - 11018131
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  11018097 agctataagctagcttttttgtgttaccaaacaca 11018131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 30523643 - 30523609
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  30523643 agctataagctagcttttttgtgttaccaaacaca 30523609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 39241226 - 39241260
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  39241226 agctataagctagcttttttgtgttaccaaacaca 39241260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 42097977 - 42098011
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  42097977 agctataagctagcttttttgtgttaccaaacaca 42098011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 7183349 - 7183386
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  7183349 ctataagctagcttttttgtgttaccaaacacagccta 7183386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 18109780 - 18109813
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacac 51  Q
    ||||||||||||||||||||||||||||||||||    
T  18109780 agctataagctagcttttttgtgttaccaaacac 18109813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 38928555 - 38928592
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    |||||||||||||||||||| |||||||||||||||||    
T  38928555 agctataagctagcttttttatgttaccaaacacaacc 38928592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 1086077 - 1086037
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  1086077 agctataagctagcttatttgtgttaccaaacacagcctaa 1086037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 1876100 - 1876132
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||    
T  1876100 ctataagctagcttttttgtgttaccaaacaca 1876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 18239371 - 18239335
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaacct 56  Q
    |||||||||| ||||||||||||||||||||||||||    
T  18239371 ctataagctaacttttttgtgttaccaaacacaacct 18239335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 34245280 - 34245240
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  34245280 agctataagctagcttttttatgttaccaaacacagcctaa 34245240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 8875704 - 8875669
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaacct 56  Q
    ||||||||| ||||||||||||||||||||||||||    
T  8875704 tataagctaacttttttgtgttaccaaacacaacct 8875669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 35422075 - 35422037
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  35422075 ctataaactagcttttttgtgttactaaacacaacctaa 35422037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 6322205 - 6322242
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    |||||||||||||||| || ||||||||||||||||||    
T  6322205 agctataagctagcttattcgtgttaccaaacacaacc 6322242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 11447274 - 11447237
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  11447274 agctataagctagcttatttgtgttactaaacacaacc 11447237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 36936138 - 36936171
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacac 51  Q
    |||||||||||||||||||| |||||||||||||    
T  36936138 agctataagctagcttttttttgttaccaaacac 36936171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 39532096 - 39532055
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    ||||||||||||  |||||||||||||||||||| |||||||    
T  39532096 agctataagctaatttttttgtgttaccaaacacgacctaag 39532055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 8341223 - 8341259
Alignment:
Q  21 tataagctagcttttttgtgttaccaaacacaaccta 57  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  8341223 tataagctagcttatttgtgttaccaaacacagccta 8341259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 10247450 - 10247482
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||| ||||||||||||||||||||||    
T  10247450 ctataagctaacttttttgtgttaccaaacaca 10247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 14258 - 14295
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14258 ctataagctagcttttttgtgttaccaaacacaaccta 14295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 18368799 - 18368840
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  18368799 agctataagctagcttttttgtgttaccaaacacagcctaag 18368840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 24119304 - 24119345
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  24119304 agctataagctagcttttttgtgttaccaaacacagcctaag 24119345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 22707325 - 22707285
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  22707325 agctataagctagcttttttgtgttaccaaacacagcctaa 22707285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 1789821 - 1789787
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  1789821 agctataagctagcttttttgtgttaccaaacaca 1789787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 18801734 - 18801700
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  18801734 agctataagctagcttttttgtgttaccaaacaca 18801700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 21778152 - 21778194
Alignment:
Q  19 gctataagctagcttttttgtgttaccaaacacaacctaagag 61  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  21778152 gctataaactagcttttttgtgttaccaaacacagcctaagag 21778194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 20645690 - 20645653
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  20645690 ctataagctagcttttttgtgttaccaaacacagccta 20645653  T

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Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 21860268 - 21860231
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  21860268 agctataagctagcttttttgtgttactaaacacaacc 21860231  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 25023520 - 25023552
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaaca 50  Q
    |||||||||||||||||||||||||||||||||    
T  25023520 agctataagctagcttttttgtgttaccaaaca 25023552  T

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Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 13866298 - 13866263
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaa 53  Q
    |||||||||||||||||||| |||||||||||||||    
T  13866298 agctataagctagcttttttatgttaccaaacacaa 13866263  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 12130515 - 12130481
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||| ||||||||||||||||||||||    
T  12130515 agctataagctaacttttttgtgttaccaaacaca 12130481  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 4976557 - 4976524
Alignment:
Q  19 gctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||| |||||||||||||||||||||    
T  4976557 gctataagctagtttttttgtgttaccaaacaca 4976524  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 20992332 - 20992369
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaaccta 57  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  20992332 ctataaactagcttttttgtgttaccaaacagaaccta 20992369  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 32562476 - 32562513
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacc 55  Q
    |||||||||||||||| || ||||||||||||||||||    
T  32562476 agctataagctagcttattcgtgttaccaaacacaacc 32562513  T

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Target: scaffold0115 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 4183 - 4143
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  4183 agctataagctagcttttttgtgttaccaaacacagcctaa 4143  T

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Target: scaffold0115; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 11923 - 11883
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacacaacctaa 58  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  11923 agctataagctagcttttttgtgttaccaaacacagcctaa 11883  T

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Target: scaffold0330 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 7023 - 6984
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaacctaag 59  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  7023 ctataagctagcttttttgtgttaccaaacacagcctaag 6984  T

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Target: scaffold0060 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 57914 - 57948
Alignment:
Q  18 agctataagctagcttttttgtgttaccaaacaca 52  Q
    |||||||||||||||||||||||||||||||||||    
T  57914 agctataagctagcttttttgtgttaccaaacaca 57948  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 157682 - 157718
Alignment:
Q  20 ctataagctagcttttttgtgttaccaaacacaacct 56  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  157682 ctataagctagcttatttatgttaccaaacacaacct 157718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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