View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18727_low_34 (Length: 271)
Name: NF18727_low_34
Description: NF18727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18727_low_34 |
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Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 24 - 255
Target Start/End: Complemental strand, 10372822 - 10372591
Alignment:
| Q |
24 |
ctggatcccaaatcaaaaccctaatctataatctaacagtatcaaattataaattaagaataagaaatgaaaattaattgtgaataattggaataccttg |
123 |
Q |
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| T |
10372822 |
ctggatcccaaatcaaaaccctaatctataatctaacagtatcaaattataaattaagaataacaaatgaaaattaattgtgaataattggaataccttg |
10372723 |
T |
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| Q |
124 |
tcagagacctcggagaggacttctgattcgagaaattgagctagattttcgtcttcgtcgtctgaaaaggtcatggtgtcatggaaatactagaaaggaa |
223 |
Q |
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| T |
10372722 |
tcagagacctcggagaggacttctgattcgagaaattgagctagattttcgtcttcgtcgtctgaaaaggtcatggtgtcatggaaatactagaaaggaa |
10372623 |
T |
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| Q |
224 |
atcgaaggtggttagaaaacggaagagagaat |
255 |
Q |
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||| |||||||||||||||||||||||||||| |
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| T |
10372622 |
atcaaaggtggttagaaaacggaagagagaat |
10372591 |
T |
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