View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18727_low_47 (Length: 238)
Name: NF18727_low_47
Description: NF18727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18727_low_47 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 36324135 - 36324345
Alignment:
| Q |
10 |
agaagcaaagggaaccacaagcaggcagtacttggcgggaaacaacaccagataccgtagtcattttcaaattcaagcaacatcaaccaattgattagtt |
109 |
Q |
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| T |
36324135 |
agaaacaaagggaaccacaagcaggcagtacttggcgggaaacaacaccagataccgtagtcattttcaaattcaagcaacatcaaccaattgattagtt |
36324234 |
T |
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| Q |
110 |
ttgaggaaattcaaaaaatctggcttgaaattcttctctctttcccttcttgcatgcaccaatcagaaaaatccgacactgaacgtgaagaagggaaaga |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |
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| T |
36324235 |
ttgaggaaattcaaaaaatctggcttgaaattcttctctctttcccttcttgcatggatcaatcagaaaaatccgacactgaacgtgaagaagggaaaga |
36324334 |
T |
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| Q |
210 |
aaggccaaaac |
220 |
Q |
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||||||||||| |
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| T |
36324335 |
aaggccaaaac |
36324345 |
T |
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