View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18728_high_5 (Length: 445)

Name: NF18728_high_5
Description: NF18728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18728_high_5
NF18728_high_5
[»] chr4 (1 HSPs)
chr4 (1-321)||(15707065-15707385)
[»] chr8 (5 HSPs)
chr8 (1-321)||(44495212-44495531)
chr8 (233-321)||(41434876-41434963)
chr8 (233-316)||(42934833-42934915)
chr8 (191-279)||(16471062-16471150)
chr8 (191-279)||(16475633-16475721)
[»] scaffold0642 (1 HSPs)
scaffold0642 (1-321)||(3810-4129)
[»] scaffold0345 (1 HSPs)
scaffold0345 (1-321)||(13722-14041)
[»] scaffold0105 (1 HSPs)
scaffold0105 (1-321)||(24940-25259)
[»] chr2 (3 HSPs)
chr2 (87-321)||(3377122-3377356)
chr2 (1-84)||(3378173-3378256)
chr2 (288-323)||(3081201-3081236)
[»] scaffold0076 (1 HSPs)
scaffold0076 (165-321)||(1773-1929)
[»] chr7 (2 HSPs)
chr7 (165-321)||(16000051-16000207)
chr7 (165-321)||(14586235-14586390)
[»] chr3 (2 HSPs)
chr3 (320-428)||(45985890-45985997)
chr3 (192-321)||(42580547-42580676)
[»] scaffold1526 (1 HSPs)
scaffold1526 (1-84)||(1277-1360)
[»] chr6 (1 HSPs)
chr6 (288-321)||(27765318-27765351)
[»] chr5 (1 HSPs)
chr5 (246-322)||(43469605-43469681)
[»] chr1 (1 HSPs)
chr1 (191-279)||(45234691-45234779)


Alignment Details
Target: chr4 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 15707385 - 15707065
Alignment:
Q  1 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacaatgttttttaagatggatagacattccaagagatatatagtgttagcgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15707385 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacactgttttttaagatggatagacattccaagagatatatagtattagcgat 15707286  T
Q  101 ggatgttgattggttagtttgaaaattgtttgtagttcaaagaggtaattgaaaggatatgatattgatggaagtatatgaaacgtgaggtaacaatggc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  15707285 ggatgttgattggttagtttgaaaattgtttgtagttcaaagaggtaattgaaaggatatgatattgatggaagtatatgaaacctgaggtaacaacggc 15707186  T
Q  201 tgagatttgttggggtggttggcagattaacatagcaattaagatggatttaggagggaaattaggaaatgattagggctaaggtgacagctcatcaagt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||||||||||||||||||    
T  15707185 tgagatttgttggggtggttggcagattaacatagcaattaagatgggtttaggagggaaattagagagtgattagggctaaggtgacagctcatcaagt 15707086  T
Q  301 ctagctttaatagtaaaggat 321  Q
    |||||||||||||||||||||    
T  15707085 ctagctttaatagtaaaggat 15707065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 44495531 - 44495212
Alignment:
Q  1 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacaatgttttttaagatggatagacattccaagagatatatagtgttagcgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  44495531 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacactgttttttaagatggatagacatttgaagagatatacagtgttagcgat 44495432  T
Q  101 ggatgttgattggttagtttgaaaattgtttgtagttcaaagaggtaattgaaaggatatgatattgatggaagtatatgaaacgtgaggtaacaatggc 200  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||    
T  44495431 ggatgttgattggttagtttgaaaattgtttgtagtt-aaagaggtaattgaaaggatatgatattgatggaagtatatgaaatgtgaggtaacaaccgc 44495333  T
Q  201 tgagatttgttggggtggttggcagattaacatagcaattaagatggatttaggagggaaattaggaaatgattagggctaaggtgacagctcatcaagt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  44495332 tgagatttgttggggtggttggcagattaacatagcaattaagatgggtttaggagggaaattagggagtgattagggctaaggtgacagctcatcaagt 44495233  T
Q  301 ctagctttaatagtaaaggat 321  Q
    |||||||||||||||||||||    
T  44495232 ctagctttaatagtaaaggat 44495212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 321
Target Start/End: Complemental strand, 41434963 - 41434876
Alignment:
Q  233 tagcaattaagatggatttaggagggaaattaggaaatgattagggctaaggtgacagctcatcaagtctagctttaatagtaaaggat 321  Q
    |||||||||| ||||  ||||||||||||||||| || |||||||| |||| ||||||||||||||||||||| |||||||||||||||    
T  41434963 tagcaattaatatgggattaggagggaaattagggaaagattagggttaag-tgacagctcatcaagtctagcgttaatagtaaaggat 41434876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 42934833 - 42934915
Alignment:
Q  233 tagcaattaagatggatttaggagggaaattaggaaatgattagggctaaggtgacagctcatcaagtctagctttaatagtaa 316  Q
    |||||||||| ||||  ||| ||||||||||||| |  |||||||| |||| ||||||||||||||||||||| ||||||||||    
T  42934833 tagcaattaatatgggattaagagggaaattagggagagattagggttaag-tgacagctcatcaagtctagcgttaatagtaa 42934915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 16471062 - 16471150
Alignment:
Q  191 taacaatggctgagatttgttggggtggttggcagattaacatagcaattaagatggatttaggagggaaattaggaaatgattagggc 279  Q
    |||||| || ||||||||  | |||||||||| || ||| | |||||||||| ||||  ||||||||||||||||| |  |||||||||    
T  16471062 taacaacggttgagatttacttgggtggttggtagtttagcttagcaattaatatgggattaggagggaaattagggagagattagggc 16471150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 16475633 - 16475721
Alignment:
Q  191 taacaatggctgagatttgttggggtggttggcagattaacatagcaattaagatggatttaggagggaaattaggaaatgattagggc 279  Q
    |||||| || ||||||||  | |||||||||| || ||| | |||||||||| ||||  ||||||||||||||||| |  |||||||||    
T  16475633 taacaacggttgagatttacttgggtggttggtagtttagcttagcaattaatatgggattaggagggaaattagggagagattagggc 16475721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 4129 - 3810
Alignment:
Q  1 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacaatgttttttaagatggatagacattccaagagatatatagtgttagcgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4129 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacactgttttttaagatggatagacattcgaagagatatatagtgttagcgat 4030  T
Q  101 ggatgttgattggttagtttgaaaattgtttgtagttcaaagaggtaattgaaaggatatgatattgatggaagtatatgaaacgtgaggtaacaatggc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| |||    
T  4029 ggatgttgattggttagtttgaaaattgtttgtagttcaaagaggtaatcgaaaggatatgatattaatggaagtatatg-aacgtgaggtaacaacggc 3931  T
Q  201 tgagatttgttggggtggttggcagattaacatagcaattaagatggatttaggagggaaattaggaaatgattagggctaaggtgacagctcatcaagt 300  Q
    |||||||||||||  | |||||||||||||||||||||||||||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  3930 tgagatttgttggattcgttggcagattaacatagcaattaagataggtttaggagggaaattagggagtgattagggctaaggtgacagctcatcaagt 3831  T
Q  301 ctagctttaatagtaaaggat 321  Q
    |||| ||||||||||||||||    
T  3830 ctagttttaatagtaaaggat 3810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 14041 - 13722
Alignment:
Q  1 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacaatgttttttaagatggatagacattccaagagatatatagtgttagcgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14041 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacactgttttttaagatggatagacattcgaagagatatatagtgttagcgat 13942  T
Q  101 ggatgttgattggttagtttgaaaattgtttgtagttcaaagaggtaattgaaaggatatgatattgatggaagtatatgaaacgtgaggtaacaatggc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| |||    
T  13941 ggatgttgattggttagtttgaaaattgtttgtagttcaaagaggtaatcgaaaggatatgatattaatggaagtatatg-aacgtgaggtaacaacggc 13843  T
Q  201 tgagatttgttggggtggttggcagattaacatagcaattaagatggatttaggagggaaattaggaaatgattagggctaaggtgacagctcatcaagt 300  Q
    |||||||||||||  | |||||||||||||||||||||||||||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  13842 tgagatttgttggattcgttggcagattaacatagcaattaagataggtttaggagggaaattagggagtgattagggctaaggtgacagctcatcaagt 13743  T
Q  301 ctagctttaatagtaaaggat 321  Q
    |||| ||||||||||||||||    
T  13742 ctagttttaatagtaaaggat 13722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 24940 - 25259
Alignment:
Q  1 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacaatgttttttaagatggatagacattccaagagatatatagtgttagcgat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24940 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacactgttttttaagatggatagacattcgaagagatatatagtgttagcgat 25039  T
Q  101 ggatgttgattggttagtttgaaaattgtttgtagttcaaagaggtaattgaaaggatatgatattgatggaagtatatgaaacgtgaggtaacaatggc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| |||    
T  25040 ggatgttgattggttagtttgaaaattgtttgtagttcaaagaggtaatcgaaaggatatgatattaatggaagtatatg-aacgtgaggtaacaacggc 25138  T
Q  201 tgagatttgttggggtggttggcagattaacatagcaattaagatggatttaggagggaaattaggaaatgattagggctaaggtgacagctcatcaagt 300  Q
    |||||||||||||  | |||||||||||||||||||||||||||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  25139 tgagatttgttggattcgttggcagattaacatagcaattaagataggtttaggagggaaattagggagtgattagggctaaggtgacagctcatcaagt 25238  T
Q  301 ctagctttaatagtaaaggat 321  Q
    |||| ||||||||||||||||    
T  25239 ctagttttaatagtaaaggat 25259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 87 - 321
Target Start/End: Complemental strand, 3377356 - 3377122
Alignment:
Q  87 atagtgttagcgatggatgttgattggttagtttgaaaattgtttgtagttcaaagaggtaattgaaaggatatgatattgatggaagtatatgaaacgt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3377356 atagtgttagcgatggatgttgattggttagtttgaaaattgtttgtagttcaaagaggtaattgaaaggatatgatattgatggaattatatgaaacgt 3377257  T
Q  187 gaggtaacaatggctgagatttgttggggtggttggcagattaacatagcaattaagatggatttaggagggaaattaggaaatgattagggctaaggtg 286  Q
    |||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||    
T  3377256 gaggtaacaacggctgaaatttgttgggatggttggcagattaacatagcaattaagatgggtttaggagggaaattagggagtgattagggctaaggtg 3377157  T
Q  287 acagctcatcaagtctagctttaatagtaaaggat 321  Q
    |||| ||||||||||||||||||||||||||||||    
T  3377156 acagttcatcaagtctagctttaatagtaaaggat 3377122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 3378256 - 3378173
Alignment:
Q  1 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacaatgttttttaagatggatagacattccaagagat 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3378256 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacactgttttttaagatggatagacattccaagagat 3378173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 323
Target Start/End: Complemental strand, 3081236 - 3081201
Alignment:
Q  288 cagctcatcaagtctagctttaatagtaaaggattt 323  Q
    ||||||||||||||| ||||||||||||||||||||    
T  3081236 cagctcatcaagtctggctttaatagtaaaggattt 3081201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 165 - 321
Target Start/End: Original strand, 1773 - 1929
Alignment:
Q  165 ttgatggaagtatatgaaacgtgaggtaacaatggctgagatttgttggggtggttggcagattaacatagcaattaagatggatttaggagggaaatta 264  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1773 ttgatggaagtatatgaaacgtgaggtaacaacggctgagatttgttagggtggttggcagattaacatagcaattaagatgggtttaggagggaaatta 1872  T
Q  265 ggaaatgattagggctaaggtgacagctcatcaagtctagctttaatagtaaaggat 321  Q
    || | |||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  1873 gggagtgattagggctaaggtgacaactcatcaagtctagcgttaatagtaaaggat 1929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 5e-57; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 165 - 321
Target Start/End: Complemental strand, 16000207 - 16000051
Alignment:
Q  165 ttgatggaagtatatgaaacgtgaggtaacaatggctgagatttgttggggtggttggcagattaacatagcaattaagatggatttaggagggaaatta 264  Q
    |||||| ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||    
T  16000207 ttgatgaaagtatatgaaacgtcaggtaacaacgactgagatttgttggggtggttggcagattagcatagaaatttagatgggtttaggagggaaatta 16000108  T
Q  265 ggaaatgattagggctaaggtgacagctcatcaagtctagctttaatagtaaaggat 321  Q
    || | |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16000107 gggagtgattagggctaaggtgacagctcatcaagtctagcattaatagtaaaggat 16000051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 165 - 321
Target Start/End: Complemental strand, 14586390 - 14586235
Alignment:
Q  165 ttgatggaagtatatgaaacgtgaggtaacaatggctgagatttgttggggtggttggcagattaacatagcaattaagatggatttaggagggaaatta 264  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||| |||||||||||| ||||||||||  ||||||||||||||||    
T  14586390 ttgatggaagtatatgaaacgtcaggtaacaacgactgagatttgttggg-tggttggaagattaacatagaaattaagatgagtttaggagggaaatta 14586292  T
Q  265 ggaaatgattagggctaaggtgacagctcatcaagtctagctttaatagtaaaggat 321  Q
    || | ||| ||||||||||||||||   ||||||||||||| |||||||||||||||    
T  14586291 gggagtgactagggctaaggtgacaatgcatcaagtctagcgttaatagtaaaggat 14586235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 320 - 428
Target Start/End: Original strand, 45985890 - 45985997
Alignment:
Q  320 atttatataccaaacaattagaattagacacacaaatacactcacatgtggtacttactacaaaattaagtttcacttcacttataaatttatgtttgtg 419  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45985890 atttatctaccaaacaattagaattagacacacaaatacactcacatgtggtacttactac-aaattaagtttcacttcacttataaatttatgtttgtg 45985988  T
Q  420 gctaatttt 428  Q
    |||||||||    
T  45985989 gctaatttt 45985997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 321
Target Start/End: Complemental strand, 42580676 - 42580547
Alignment:
Q  192 aacaatggctgagatttgttggggtggttggcagattaacatagcaattaagatggatttaggagggaaattaggaaatgattagggctaaggtgacagc 291  Q
    ||||| || ||||||||  | ||||||||||||| |||   |||||||||| ||||  ||||||||||||||||| |  ||||||||| |||||| ||||    
T  42580676 aacaacggttgagatttacttgggtggttggcagtttaggctagcaattaatatgggattaggagggaaattagggagagattagggcaaaggtgccagc 42580577  T
Q  292 tcatcaagtctagctttaatagtaaaggat 321  Q
    |||||||||  ||| || ||| ||||||||    
T  42580576 tcatcaagttgagcgtttataataaaggat 42580547  T

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Target: scaffold1526 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold1526
Description:

Target: scaffold1526; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1277 - 1360
Alignment:
Q  1 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacaatgttttttaagatggatagacattccaagagat 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1277 attggaatgatgttagagagaaagtaaggaatatggagcagtgtgcaacactgttttttaagatggatagacattccaagagat 1360  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 321
Target Start/End: Complemental strand, 27765351 - 27765318
Alignment:
Q  288 cagctcatcaagtctagctttaatagtaaaggat 321  Q
    ||||||||||||||||||||||||| ||||||||    
T  27765351 cagctcatcaagtctagctttaataataaaggat 27765318  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 43469605 - 43469681
Alignment:
Q  246 ggatttaggagggaaattaggaaatgattagggctaaggtgacagctcatcaagtctagctttaatagtaaaggatt 322  Q
    |||||| ||||||||| || ||| |||||||||| |   || ||||||||||||||| ||||| ||| |||||||||    
T  43469605 ggatttgggagggaaaataagaagtgattagggcaacactgccagctcatcaagtctggcttttataataaaggatt 43469681  T

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Target: chr1 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 45234779 - 45234691
Alignment:
Q  191 taacaatggctgagatttgttggggtggttggcagattaacatagcaattaagatggatttaggagggaaattaggaaatgattagggc 279  Q
    |||||| || ||||||||  | ||||||||||||| ||| | |||||||||| ||||  ||||||| ||||||||| |  |||||||||    
T  45234779 taacaacggttgagatttacttgggtggttggcagtttagcttagcaattaatatgggattaggagagaaattagggagagattagggc 45234691  T

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