View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18731_high_1 (Length: 681)
Name: NF18731_high_1
Description: NF18731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18731_high_1 |
 | |
|
| [»] chr7 (2 HSPs) |
| |
|
| [»] scaffold0346 (1 HSPs) |
| |
|
| [»] scaffold0127 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 621; Significance: 0; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 621; E-Value: 0
Query Start/End: Original strand, 10 - 681
Target Start/End: Complemental strand, 4334845 - 4334173
Alignment:
| Q |
10 |
tccaagaatatatagttttatttttggtaaactaatatttttggtattatagaatatggatggatattgcccc-acaatctaaaatttctggctctgcca |
108 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4334845 |
tccaataatatatagttttatttttggtaaactaatatttttggtattatagtatatggatggatattgccccgacaatctaaaatttctggctctgcca |
4334746 |
T |
|
| Q |
109 |
ccggtgctaagacaactctaatatggtattaataccaccttttatggtactgagacctttctaatatgatactagaaccattatgacatggaacttggac |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4334745 |
ccggtgctaagacaactctaatatggtattaataccaccatttatggtactgagaccattctaatatgatactagaaccattatgacatggaacttggac |
4334646 |
T |
|
| Q |
209 |
cagtctgatatggtgtttccaccatactaatattagcatgtattttttagtatgcatttcgaaaggcaaaatggttatcaaaacaacaaaattctctgag |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4334645 |
cagtctgatatggtgtttccaccatactaatattagcatgtattttttagtatgcatttcgagaggcaaaatggttatcaaaacaacaaaattctctgag |
4334546 |
T |
|
| Q |
309 |
tacaagttgaagtacaaatatttcgacagatatatggaagggtttcgacaagtgtttgttcactttgtctgggaagatttgaattctcactgaataatca |
408 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4334545 |
tacaagttgaagtacaaatattttgacagatttatggaagggtttcgacaagtgtttgttcactttgtctgggaagatttgaattctcactgaataatca |
4334446 |
T |
|
| Q |
409 |
aaattgaaggtgttagcctttattttgaatgtgcatttcgacaagcaaaatggtggccaaaactacaagattctcgaagtccaggatcaaagcatgaagc |
508 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4334445 |
aaattgaaggtgttagcctttattttttatgtgcatttcgacaagcaaaatggtggccaaaactacaagattctcgaagtccaggattaaagcatgaagc |
4334346 |
T |
|
| Q |
509 |
ttttgacatgcatgtttttgacagtctctttgatttcaaccaactttaaatcctcccggaagaggcaaggttgaaagttcagacacatggggtgttagcc |
608 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4334345 |
ttttgacatgcatgtttttgacagtctctttgatttcaaccaactttaaatcctcccggaagaggcaaggttgaaagttcagacacatggggtgttagcc |
4334246 |
T |
|
| Q |
609 |
tgtatttttgagtatgtgtttcgacaaggaaggaggaagccaaaactacataattctctaactccaagacaaa |
681 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4334245 |
tgtattttttagtatgtgtttcgacaaggaaggaggaagccaaaactacataattctctaactccaagacaaa |
4334173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 10 - 673
Target Start/End: Complemental strand, 4339078 - 4338417
Alignment:
| Q |
10 |
tccaagaatatatagttttatttttggtaaactaatatttttggtattatagaatatggatggatattgcccc-acaatctaaaatttctggctctgcca |
108 |
Q |
| |
|
||||| ||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||||||| |||||| |||| |
|
|
| T |
4339078 |
tccaataatatatagttttttttttggtaaaacaatatttttagtattatagtatatggatggatattgcccccacaatctaaaatttatggctccgcca |
4338979 |
T |
|
| Q |
109 |
ccggtgctaagacaactctaatatggtattaataccaccttttatggtactgagacctttctaatatgatactagaaccattatgacatggaacttggac |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4338978 |
ccggtgctaagacaactctaatatggtattaataccactctttatggtacagagaccattctaatatgatactagaaccattatgacatggaacttggac |
4338879 |
T |
|
| Q |
209 |
cagtctgatatggtgtttccaccatactaatattagcatgtattttttagtatgcatttcgaaaggcaaaatggttatcaaaacaacaaaattctctgag |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
4338878 |
cagtctgatatggtgtttccaccatactaatgttagcatgtatttttaagtatgcatttcgagaggcaaaatggttatcaaaacaacagaattct--gag |
4338781 |
T |
|
| Q |
309 |
tacaagttgaagtacaaatatttcgacagatatatggaagggtttcgacaagtgtttgttcactttgtctgggaagatttgaattctcactgaataatca |
408 |
Q |
| |
|
||||||||||| |||||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4338780 |
tacaagttgaaccacaaatattttcacagatttatggaagggttttgacaagtggttgttcactttgtctgggaagatttgaattcttactgaataatca |
4338681 |
T |
|
| Q |
409 |
aaattgaaggtgttagcctttattttgaatgtgcatttcgacaagcaaaatggtggccaaaactacaagattctcgaagtccaggatcaaagcatgaagc |
508 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4338680 |
atattgaaggtgttagcctatattttgaatgtgcatttcgacaagcaaaatggtggccaaaactacaggattctcgaagtccaggatcaaagcatgaagc |
4338581 |
T |
|
| Q |
509 |
ttttgacatgcatgtttttgacagtctctttgatttcaaccaactttaaatcctcccggaagaggcaaggttgaaagttcagacacatggggtgttagcc |
608 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4338580 |
ttttgacatgcatgttttcgacagtctctctgatttcaaccaactttaaatcctctcgg-agaggcaaggttgaaagttcagacacatggggtgttagcc |
4338482 |
T |
|
| Q |
609 |
tgtatttttgagtatgtgtttcgacaaggaaggaggaagccaaaactacataattctctaactcc |
673 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
4338481 |
tgtatttttgagtatgtgtttcgacaaggaaggaggaagccaagactacataattctcgaactcc |
4338417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0346 (Bit Score: 527; Significance: 0; HSPs: 1)
Name: scaffold0346
Description:
Target: scaffold0346; HSP #1
Raw Score: 527; E-Value: 0
Query Start/End: Original strand, 16 - 681
Target Start/End: Original strand, 11257 - 11922
Alignment:
| Q |
16 |
aatatatagttttatttttggtaaactaatatttttggtattatagaatatggatggatattgcccc-acaatctaaaatttctggctctgccaccggtg |
114 |
Q |
| |
|
||||||||||||| |||| |||||| |||||||||| | ||||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||||| |
|
|
| T |
11257 |
aatatatagtttt-ttttcggtaaaataatatttttagcattatagtatatggatggatattgcccccacaatctaatatttctggctccgccaccggtg |
11355 |
T |
|
| Q |
115 |
ctaagacaactctaatatggtattaataccaccttttatggtactgagacctttctaatatgatactagaaccattatgacatggaacttggaccagtct |
214 |
Q |
| |
|
|||| |||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11356 |
ctaatacaactttaatatggtattaataccactctttatggtactgagaccattctaatataatactagaaccattatgacagggaacttggaccagtct |
11455 |
T |
|
| Q |
215 |
gatatggtgtttccaccatactaatattagcatgtattttttagtatgcatttcgaaaggcaaaatggttatcaaaacaacaaaattctctgagtacaag |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
11456 |
gatatggtgtttccaccatactaatattagcatgtatttttaagtatgcatttcgagaggcaaaatggttatcaaaaccacaaaattctctgagtacaag |
11555 |
T |
|
| Q |
315 |
ttgaagtacaaatatttcgacagatatatggaagggtttcgacaagtgtttgttcactttgtctgggaagatttgaattctcactgaataatcaaaattg |
414 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
11556 |
ttgaagcacaaatatttcgacagatttatggaagggtttcgacaagtgtttgttcactttgactgggaagattggaattctcactgaataatcaaaattg |
11655 |
T |
|
| Q |
415 |
aaggtgttagcctttattttgaatgtgcatttcgacaagcaaaatggtggccaaaactacaagattctcgaagtccaggatcaaagcatgaagcttttga |
514 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11656 |
aaggtgttagcctatattttgaatgtgcatttcgacaagcaaaatggtggccaaaactacaagattctcgaagtccaggatcaaagcatgaagcttttga |
11755 |
T |
|
| Q |
515 |
catgcatgtttttgacagtctctttgatttcaaccaactttaaatcctcccggaagaggcaaggttgaaagttcagacacatggggtgttagcctgtatt |
614 |
Q |
| |
|
|||||||||||| |||| ||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
11756 |
catgcatgttttcgacattctctctgatttcaaccaactttaaatccaccctgaagaggcaagcttgaaagttcagatacatggggtgttagccggtatt |
11855 |
T |
|
| Q |
615 |
tttgagtatgtgtttcgacaaggaaggaggaagccaaaactacataattctctaactccaagacaaa |
681 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11856 |
tttgagtatgtgtttcgacaaggaaggaggaagccaagactacataattctctaactccaagacaaa |
11922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 182; Significance: 5e-98; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 241 - 598
Target Start/End: Complemental strand, 9382968 - 9382611
Alignment:
| Q |
241 |
ttagcatgtattttttagtatgcatttcgaaaggcaaaatggttatcaaaacaacaaaattctctgagtacaagttgaagtacaaatatttcgacagata |
340 |
Q |
| |
|
||||| ||||||||| |||||||||||||| || |||||||||||||||||| ||||||||||| |||||||||||||| |||| ||||| |||||| |
|
|
| T |
9382968 |
ttagcctgtatttttgagtatgcatttcgacagacaaaatggttatcaaaacctcaaaattctctaagtacaagttgaagcacaagtattttgacagagt |
9382869 |
T |
|
| Q |
341 |
tatggaagggtttcgacaagtgtttgttcactttgtctgggaagatttgaattctcactgaataatcaaaattgaaggtgttagcctttattttgaatgt |
440 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| | || |||||||| |||||||||| || || |||| |||||||||||||||| |||||||||| | |
|
|
| T |
9382868 |
tatggaagggtttcgacaagtgttcgttcacttcgacttggaagattcaaattctcactcaagaagcaaacttgaaggtgttagcctatattttgaatat |
9382769 |
T |
|
| Q |
441 |
gcatttcgacaagcaaaatggtggccaaaactacaagattctcgaagtccaggatcaaagcatgaagcttttgacatgcatgtttttgacagtctctttg |
540 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||| | ||| |||| ||||||||| |||| |||| || |
|
|
| T |
9382768 |
gcatttcgacaagcaaaattgtggccaaaactacaagattctctaagttcaggatcaaagcatgaggttttcgacaagcatgttttcgacaaactctctg |
9382669 |
T |
|
| Q |
541 |
atttcaaccaactttaaatcctcccggaagaggcaaggttgaaagttcagacacatgg |
598 |
Q |
| |
|
||||| || || |||||||||||| ||| |||||||||||||||||| ||||||| |
|
|
| T |
9382668 |
atttcgacaaaaattaaatcctccctaaagttgcaaggttgaaagttcaggcacatgg |
9382611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 601 - 677
Target Start/End: Original strand, 4521274 - 4521350
Alignment:
| Q |
601 |
tgttagcctgtatttttgagtatgtgtttcgacaaggaaggaggaagccaaaactacataattctctaactccaaga |
677 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||| | |||||||||| || || |||||||||||||| ||||||| |
|
|
| T |
4521274 |
tgttagcttgtatttttgagcatgtgtttcgacaggcaaggaggaagttaagaccacataattctctaagtccaaga |
4521350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 12906318 - 12906384
Alignment:
| Q |
111 |
ggtgctaagacaactctaatatggtattaataccacctt-ttatggtactgagacctttctaatatg |
176 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||| || |||||||||| ||||| |||| ||||| |
|
|
| T |
12906318 |
ggtgctaagaccactctaatatggtattgataccactttattatggtactaagaccattcttatatg |
12906384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 23193153 - 23193081
Alignment:
| Q |
111 |
ggtgctaagacaactctaatatggtattaataccacctt-ttatggtactgagacctttctaatatgatacta |
182 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||| || |||||||||| ||||| |||| ||||| ||||| |
|
|
| T |
23193153 |
ggtgctaagaccactctaatatggtattgataccattttattatggtactaagaccattcttatatggtacta |
23193081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 36724873 - 36724945
Alignment:
| Q |
111 |
ggtgctaagacaactctaatatggtattaataccac-cttttatggtactgagacctttctaatatgatacta |
182 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||| || |||||| ||| ||||| |||| ||||| ||||| |
|
|
| T |
36724873 |
ggtgctaagaccactctaatatggtattgataccactctattatggcactaagaccattcttatatggtacta |
36724945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 634
Target Start/End: Complemental strand, 9382973 - 9382937
Alignment:
| Q |
598 |
gggtgttagcctgtatttttgagtatgtgtttcgaca |
634 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |
|
|
| T |
9382973 |
gggtgttagcctgtatttttgagtatgcatttcgaca |
9382937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 99; Significance: 2e-48; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 241 - 463
Target Start/End: Original strand, 39332790 - 39333011
Alignment:
| Q |
241 |
ttagcatgtattttttagtatgcatttcgaaaggcaaaatggttatcaaaacaacaaaattctctgagtacaagttgaagtacaaatatttcgacagata |
340 |
Q |
| |
|
||||| ||||||||| |||||||||||||| | ||||||||||||||||||| | |||||||||| |||||||||| ||| |||| ||||||||| || |
|
|
| T |
39332790 |
ttagcctgtatttttaagtatgcatttcgacaagcaaaatggttatcaaaaccaaaaaattctctaagtacaagttaaagcacaagtatttcgactgagt |
39332889 |
T |
|
| Q |
341 |
tatggaagggtttcgacaagtgtttgttcactttgtctgggaagatttgaattctcactgaataatcaaaattgaaggtgttagcctttattttgaatgt |
440 |
Q |
| |
|
||||| ||||||| ||||| ||||||||||| | | | | ||||||| ||||||||||||| || ||| | ||||||||||||||| |||||||| | | |
|
|
| T |
39332890 |
tatgg-agggttttgacaaatgtttgttcacatcgaccgagaagattcaaattctcactgaagaagcaacaatgaaggtgttagcctgtattttgattat |
39332988 |
T |
|
| Q |
441 |
gcatttcgacaagcaaaatggtg |
463 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
39332989 |
gcatttcgacaagcaaaatggtg |
39333011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 19949987 - 19950061
Alignment:
| Q |
115 |
ctaagacaactctaatatggtattaataccac-cttttatggtactgagacctttctaatatgatactagaacca |
188 |
Q |
| |
|
||||||| |||| ||||||||||| ||||||| || |||||||||| ||||| ||| |||||||||||| |||| |
|
|
| T |
19949987 |
ctaagaccactccaatatggtattgataccactctattatggtactaagaccactcttatatgatactaggacca |
19950061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 264 - 367
Target Start/End: Complemental strand, 31483879 - 31483775
Alignment:
| Q |
264 |
atttcgaaaggcaaaatggttatcaaaacaacaaaattctctgagtacaagttgaagtacaaatatttcgacagatatat-ggaagggtttcgacaagtg |
362 |
Q |
| |
|
||||||| ||||||||||||||| || || ||||| |||||| |||||||||||||| |||| |||||||||| | || ||||||| ||||||||||| |
|
|
| T |
31483879 |
atttcgacaggcaaaatggttattaagaccacaaatttctctaagtacaagttgaagcacaagtatttcgacaaagtcatgggaagggcttcgacaagtg |
31483780 |
T |
|
| Q |
363 |
tttgt |
367 |
Q |
| |
|
||||| |
|
|
| T |
31483779 |
tttgt |
31483775 |
T |
|
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Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 48435758 - 48435681
Alignment:
| Q |
111 |
ggtgctaagacaactctaatatggtattaataccac-cttttatggtactgagacctttctaatatgatactagaacca |
188 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||| || |||||||||| ||||| |||| ||||||||||| ||||| |
|
|
| T |
48435758 |
ggtgctaagaccactctaatatggtattgataccactctattatggtactaagaccattct-atatgatactaaaacca |
48435681 |
T |
|
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Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 48432231 - 48432159
Alignment:
| Q |
111 |
ggtgctaagacaactctaatatggtattaataccac-cttttatggtactgagacctttctaatatgatacta |
182 |
Q |
| |
|
|||| |||||| |||||||||||||||| ||||||| || ||||||||| ||||| |||| ||||| ||||| |
|
|
| T |
48432231 |
ggtgttaagaccactctaatatggtattgataccactctattatggtaccaagaccattcttatatggtacta |
48432159 |
T |
|
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Target: chr6 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 32814993 - 32814921
Alignment:
| Q |
111 |
ggtgctaagacaactctaatatggtattaataccac-cttttatggtactgagacctttctaatatgatacta |
182 |
Q |
| |
|
||||||||||| ||| |||||||||||| ||||||| || |||||||||| ||||| |||| ||||| ||||| |
|
|
| T |
32814993 |
ggtgctaagaccactataatatggtattgataccactctattatggtactaagaccattcttatatggtacta |
32814921 |
T |
|
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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 35129793 - 35129865
Alignment:
| Q |
111 |
ggtgctaagacaactctaatatggtattaataccac-cttttatggtactgagacctttctaatatgatacta |
182 |
Q |
| |
|
||||||||||| | |||||||||||||| ||||||| || |||||||||| |||| |||| ||||| ||||| |
|
|
| T |
35129793 |
ggtgctaagaccattctaatatggtattgataccactctattatggtactaagactattcttatatggtacta |
35129865 |
T |
|
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Target: chr5 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 188
Target Start/End: Complemental strand, 1286196 - 1286118
Alignment:
| Q |
111 |
ggtgctaagacaactctaatatggtattaataccac-cttttatggtactgagacctttctaatatgatactagaacca |
188 |
Q |
| |
|
||||||||||| |||| ||||||||||| ||||||| || |||||||||| ||||| ||| ||||| |||||| |||| |
|
|
| T |
1286196 |
ggtgctaagaccactccaatatggtattgataccactctattatggtactaagaccactcttatatggtactaggacca |
1286118 |
T |
|
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Target: scaffold0127 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0127
Description:
Target: scaffold0127; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 18893 - 18811
Alignment:
| Q |
22 |
tagttttatttttggtaaactaatatttttggtattatagaatatggatggatattgccccacaatctaaaatttctggctctgcca |
108 |
Q |
| |
|
|||||||||| |||||||| || |||||||| ||||| || ||||| || |||| ||||||||||||||||||| |||| |||| |
|
|
| T |
18893 |
tagttttattgttggtaaaatagtatttttgatattaaagtatatgaat----attgtcccacaatctaaaatttctagctccgcca |
18811 |
T |
|
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