View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18735_high_12 (Length: 214)
Name: NF18735_high_12
Description: NF18735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18735_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 17 - 180
Target Start/End: Complemental strand, 45308221 - 45308062
Alignment:
| Q |
17 |
caacctaaatatcatattcttcagtttttcaatgtcaattaactctgttatctagaaacatcaccaataaaaatcgttaacatagaacttaaaaataagt |
116 |
Q |
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| T |
45308221 |
caacctaaatatcatattcttcagtttttcaatgtcaa----ctctgttatctagaaacatcaccaataaaaatcgttaacatagaacttaaaaataagt |
45308126 |
T |
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| Q |
117 |
aatttaaagatgtttcgagtcatgtttggtgtgttaaacgtggagaaatcctcacgacacagtt |
180 |
Q |
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| T |
45308125 |
aatttaaagatgtttcgagtcatgtttggtgtgttaaacgtggtgaaatcctcacgacacagtt |
45308062 |
T |
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