View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18737_low_21 (Length: 378)
Name: NF18737_low_21
Description: NF18737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18737_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 10 - 362
Target Start/End: Complemental strand, 31923873 - 31923521
Alignment:
| Q |
10 |
caattagaacagacaaatactcattcaaagctcgccgcaattcagctatagctgatccatctgcatcaccaaagaattcaaatttttaaaccatcaaaag |
109 |
Q |
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| T |
31923873 |
caattagaacagacaaatactcattcaaagctcgccgcaattcagctatagctgatccatctgcatcaccaaagaattcaaatttttaaaccatcaaaag |
31923774 |
T |
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| Q |
110 |
atcttcaattacttttgctatgcataattgagaaagtatgactcagtttaccacatcatcatttttcgataaattctattgaggactaaaaatggaggaa |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
31923773 |
atcttcaattacttttgctatgcataattgagaaagtatgactcagtttgccacatcatcatttttcgataaattctattgaggactaaaagtggaggaa |
31923674 |
T |
|
| Q |
210 |
tcatattacaagaccaaatacactattaactctaaaagtagtagagtttcaaatgaacaaaccggtatcttctgctaccaacacaatctggttccgaaga |
309 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31923673 |
tcatattacaagaccaaaaacactattaactctaaaagtagtagagtttcaaatgaacaaaccggtatcttctgctaccaacacaatctggttccgaaga |
31923574 |
T |
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| Q |
310 |
gacgacaatttatcagcaagatcctttggaactaatcctttaagtgctctttg |
362 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31923573 |
gacgacaatttatcagcaagatcctttggaactaatcctttaagtgctctttg |
31923521 |
T |
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