View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18738_low_6 (Length: 337)
Name: NF18738_low_6
Description: NF18738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18738_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 26 - 307
Target Start/End: Complemental strand, 32325792 - 32325505
Alignment:
| Q |
26 |
gtgtaaagatttaatttgattatagaaaaacaaaattattttcctcatgaaagtgggaaatatacgtccaaacgaggtcgtgaaaacaccaatgaaaagc |
125 |
Q |
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| T |
32325792 |
gtgtaaagatttaatttgattatagaaaaacaaaattattttcctcatgaaagtgggaaatatacgtccaaacgaggtcgtgaaaacaccaatgtaaagc |
32325693 |
T |
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| Q |
126 |
taaaaaatcaga------accaaagccacaaggaaagaaacgttgctttccttattttctttcctcatccaccatgcatgcatgcacgattatcccttgg |
219 |
Q |
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|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32325692 |
taaaaaatcatagacataaccaaagccacaaggaaagaaacgttgctttccttattttctttcctcatccaccatgcatgcatgcacgattatcccttgg |
32325593 |
T |
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| Q |
220 |
agttggaagaacgaattccatttctttcttctgattttctttccccaccacatccccaaacccaacatttaaaatttcctttaccatt |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
32325592 |
agttggaagaacgaattccatttctttcttctgattttctttccccaccacatccccaaacccaacatttaaaattccctttaccatt |
32325505 |
T |
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