View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18739_low_8 (Length: 304)

Name: NF18739_low_8
Description: NF18739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18739_low_8
NF18739_low_8
[»] chr1 (66 HSPs)
chr1 (1-293)||(37473108-37473400)
chr1 (1-137)||(14576722-14576858)
chr1 (20-131)||(17830025-17830136)
chr1 (31-137)||(41195293-41195399)
chr1 (7-139)||(14331652-14331784)
chr1 (40-136)||(33541816-33541912)
chr1 (46-140)||(38247316-38247409)
chr1 (1-131)||(51688576-51688706)
chr1 (1-74)||(27976523-27976596)
chr1 (61-132)||(47498962-47499033)
chr1 (20-138)||(3234111-3234229)
chr1 (42-136)||(5741528-5741622)
chr1 (30-139)||(1510407-1510516)
chr1 (61-133)||(5894282-5894354)
chr1 (5-132)||(43990118-43990248)
chr1 (44-139)||(17727207-17727302)
chr1 (20-130)||(30191863-30191973)
chr1 (41-135)||(41505554-41505648)
chr1 (1-139)||(44932004-44932139)
chr1 (42-136)||(5720847-5720941)
chr1 (20-129)||(29904633-29904741)
chr1 (47-109)||(24552455-24552517)
chr1 (20-81)||(49938653-49938714)
chr1 (81-133)||(27820479-27820531)
chr1 (1-65)||(30582017-30582081)
chr1 (37-118)||(31774146-31774223)
chr1 (1-65)||(47432033-47432097)
chr1 (29-108)||(18556821-18556900)
chr1 (61-136)||(22343954-22344029)
chr1 (37-125)||(23198364-23198448)
chr1 (81-132)||(24562452-24562503)
chr1 (20-129)||(37769748-37769851)
chr1 (102-139)||(473029-473066)
chr1 (42-127)||(42391241-42391326)
chr1 (94-139)||(51190720-51190765)
chr1 (41-133)||(2294982-2295065)
chr1 (93-137)||(34795565-34795609)
chr1 (93-133)||(45855730-45855770)
chr1 (101-132)||(3887760-3887791)
chr1 (42-118)||(25549085-25549157)
chr1 (63-130)||(27146369-27146436)
chr1 (1-131)||(30581683-30581803)
chr1 (81-136)||(33546599-33546654)
chr1 (92-131)||(38189656-38189695)
chr1 (30-121)||(43589506-43589597)
chr1 (37-131)||(1509623-1509717)
chr1 (63-133)||(1829075-1829145)
chr1 (42-132)||(5709432-5709522)
chr1 (20-90)||(16145060-16145130)
chr1 (1-63)||(24915120-24915182)
chr1 (82-136)||(43230894-43230948)
chr1 (101-131)||(46423151-46423181)
chr1 (7-96)||(14385838-14385927)
chr1 (101-130)||(39906524-39906553)
chr1 (64-133)||(45975569-45975638)
chr1 (61-129)||(7069183-7069251)
chr1 (81-133)||(9572247-9572299)
chr1 (81-132)||(10665960-10666014)
chr1 (27-59)||(15609035-15609067)
chr1 (101-129)||(27970432-27970460)
chr1 (93-137)||(37617563-37617607)
chr1 (30-66)||(38189695-38189731)
chr1 (30-74)||(42174785-42174829)
chr1 (100-136)||(45145130-45145166)
chr1 (61-113)||(49825095-49825147)
chr1 (93-137)||(49938613-49938657)
[»] chr8 (42 HSPs)
chr8 (1-137)||(1058143-1058279)
chr8 (43-139)||(14956406-14956502)
chr8 (29-140)||(36963442-36963553)
chr8 (20-132)||(12976086-12976195)
chr8 (41-131)||(38750229-38750319)
chr8 (31-128)||(9130409-9130506)
chr8 (7-136)||(35534686-35534813)
chr8 (1-73)||(12497300-12497372)
chr8 (31-136)||(41821425-41821528)
chr8 (29-130)||(29168149-29168250)
chr8 (29-132)||(32975930-32976033)
chr8 (29-108)||(42043442-42043521)
chr8 (42-125)||(40637407-40637486)
chr8 (1-90)||(10758325-10758414)
chr8 (29-110)||(38353242-38353322)
chr8 (61-133)||(26215375-26215447)
chr8 (81-137)||(29819029-29819085)
chr8 (75-139)||(40980993-40981057)
chr8 (37-125)||(10628183-10628267)
chr8 (31-138)||(15180406-15180512)
chr8 (102-137)||(18133551-18133586)
chr8 (37-136)||(28763239-28763338)
chr8 (62-133)||(34236041-34236112)
chr8 (20-81)||(11861728-11861789)
chr8 (61-130)||(41475179-41475248)
chr8 (2-74)||(25930624-25930696)
chr8 (61-109)||(40859837-40859885)
chr8 (61-131)||(2840239-2840310)
chr8 (61-131)||(2844926-2844997)
chr8 (81-128)||(9956951-9956998)
chr8 (22-81)||(30251539-30251598)
chr8 (67-132)||(900821-900887)
chr8 (101-131)||(27752433-27752463)
chr8 (67-132)||(37353373-37353439)
chr8 (20-81)||(16825625-16825686)
chr8 (83-138)||(4389817-4389873)
chr8 (61-129)||(5404500-5404568)
chr8 (101-133)||(22790509-22790541)
chr8 (42-90)||(27028751-27028799)
chr8 (105-137)||(31716392-31716424)
chr8 (70-137)||(41589555-41589625)
chr8 (37-73)||(42051982-42052018)
[»] chr3 (51 HSPs)
chr3 (1-136)||(20880343-20880477)
chr3 (1-140)||(30956695-30956834)
chr3 (1-140)||(30972507-30972646)
chr3 (2-136)||(35959526-35959660)
chr3 (1-137)||(24684892-24685028)
chr3 (51-138)||(31365391-31365478)
chr3 (41-140)||(53789570-53789669)
chr3 (1-136)||(20170389-20170524)
chr3 (29-130)||(1508677-1508779)
chr3 (38-132)||(944363-944459)
chr3 (23-130)||(2719341-2719448)
chr3 (30-140)||(19983642-19983752)
chr3 (61-131)||(34235195-34235265)
chr3 (1-131)||(36631120-36631250)
chr3 (20-118)||(46778315-46778413)
chr3 (29-114)||(12862344-12862429)
chr3 (44-125)||(28795944-28796025)
chr3 (41-133)||(3845671-3845763)
chr3 (69-137)||(34034036-34034104)
chr3 (81-133)||(46886836-46886888)
chr3 (71-139)||(47132240-47132308)
chr3 (37-125)||(12833871-12833955)
chr3 (61-131)||(402660-402730)
chr3 (20-118)||(29520567-29520664)
chr3 (39-121)||(39980610-39980692)
chr3 (37-118)||(7814244-7814321)
chr3 (94-133)||(849551-849590)
chr3 (65-140)||(20257422-20257497)
chr3 (20-74)||(583974-584028)
chr3 (20-118)||(5331178-5331275)
chr3 (46-108)||(30443658-30443720)
chr3 (53-134)||(139794-139875)
chr3 (47-140)||(466062-466157)
chr3 (61-133)||(31403237-31403309)
chr3 (101-137)||(39602337-39602373)
chr3 (61-112)||(40665329-40665380)
chr3 (20-74)||(7301266-7301320)
chr3 (29-67)||(10704670-10704708)
chr3 (29-79)||(18405929-18405979)
chr3 (81-131)||(20003433-20003483)
chr3 (59-133)||(26990607-26990681)
chr3 (63-133)||(29002961-29003031)
chr3 (97-134)||(10704708-10704745)
chr3 (63-116)||(23815949-23816002)
chr3 (102-130)||(24085485-24085513)
chr3 (81-125)||(28240213-28240257)
chr3 (81-129)||(34610945-34610993)
chr3 (67-131)||(35328288-35328351)
chr3 (93-129)||(36507241-36507277)
chr3 (24-88)||(37689147-37689211)
chr3 (49-136)||(42800032-42800117)
[»] chr6 (27 HSPs)
chr6 (5-138)||(24626159-24626292)
chr6 (32-140)||(34430578-34430686)
chr6 (31-136)||(6538383-6538488)
chr6 (30-137)||(30926405-30926510)
chr6 (5-139)||(8147568-8147699)
chr6 (20-115)||(18076083-18076178)
chr6 (33-132)||(26550304-26550404)
chr6 (29-133)||(35070727-35070833)
chr6 (61-139)||(264244-264322)
chr6 (5-74)||(30536406-30536475)
chr6 (61-133)||(35069431-35069503)
chr6 (78-129)||(10645465-10645516)
chr6 (31-74)||(30536657-30536700)
chr6 (1-90)||(6909941-6910031)
chr6 (66-128)||(9632785-9632847)
chr6 (83-132)||(14929604-14929653)
chr6 (20-125)||(33943147-33943251)
chr6 (41-137)||(19411592-19411688)
chr6 (29-76)||(9763390-9763437)
chr6 (39-74)||(14164050-14164085)
chr6 (29-132)||(29754176-29754279)
chr6 (45-116)||(32014162-32014233)
chr6 (20-74)||(18690422-18690476)
chr6 (62-139)||(847931-848008)
chr6 (64-133)||(23063650-23063719)
chr6 (29-74)||(31623488-31623533)
chr6 (81-133)||(658584-658636)
[»] chr2 (56 HSPs)
chr2 (20-133)||(41407170-41407283)
chr2 (1-140)||(42659220-42659359)
chr2 (42-136)||(1633656-1633750)
chr2 (20-126)||(32592463-32592569)
chr2 (20-140)||(15305518-15305639)
chr2 (41-140)||(12795654-12795753)
chr2 (22-124)||(3311922-3312024)
chr2 (63-133)||(39659639-39659709)
chr2 (63-131)||(2416194-2416262)
chr2 (47-139)||(11863794-11863886)
chr2 (20-135)||(15757747-15757869)
chr2 (1-105)||(41241201-41241305)
chr2 (1-73)||(41812159-41812231)
chr2 (1-129)||(41851408-41851536)
chr2 (1-132)||(12464542-12464673)
chr2 (31-137)||(33319912-33320025)
chr2 (41-135)||(23974599-23974693)
chr2 (20-125)||(13325447-13325552)
chr2 (64-129)||(26626759-26626824)
chr2 (47-133)||(41293346-41293434)
chr2 (37-105)||(26201925-26201993)
chr2 (5-105)||(42868534-42868634)
chr2 (20-131)||(38010283-38010394)
chr2 (42-125)||(5599164-5599243)
chr2 (4-133)||(38916378-38916514)
chr2 (92-137)||(41812234-41812279)
chr2 (61-133)||(19608744-19608816)
chr2 (61-133)||(28792329-28792401)
chr2 (20-108)||(31561841-31561929)
chr2 (82-133)||(4606860-4606911)
chr2 (4-74)||(45229440-45229510)
chr2 (101-133)||(7043881-7043913)
chr2 (63-131)||(9395011-9395079)
chr2 (61-133)||(26143760-26143831)
chr2 (61-133)||(40682492-40682564)
chr2 (95-131)||(40835435-40835471)
chr2 (82-133)||(41880642-41880694)
chr2 (101-132)||(9174694-9174725)
chr2 (41-131)||(31744237-31744325)
chr2 (92-131)||(40279082-40279121)
chr2 (76-131)||(43570297-43570352)
chr2 (75-129)||(27695730-27695784)
chr2 (101-135)||(43036507-43036541)
chr2 (20-57)||(4026762-4026799)
chr2 (48-101)||(12037971-12038024)
chr2 (20-89)||(22971606-22971674)
chr2 (47-136)||(28330414-28330502)
chr2 (63-139)||(39567775-39567852)
chr2 (4-57)||(42420366-42420419)
chr2 (64-133)||(42457827-42457896)
chr2 (22-86)||(10258592-10258656)
chr2 (20-60)||(10619303-10619343)
chr2 (85-133)||(12194821-12194869)
chr2 (101-137)||(21827947-21827983)
chr2 (64-132)||(36534668-36534736)
chr2 (101-129)||(41449791-41449819)
[»] chr7 (52 HSPs)
chr7 (32-132)||(21568728-21568828)
chr7 (5-141)||(46078008-46078144)
chr7 (1-136)||(45263959-45264096)
chr7 (22-140)||(5947023-5947137)
chr7 (29-140)||(4970885-4970996)
chr7 (41-137)||(9210493-9210589)
chr7 (20-136)||(33128623-33128739)
chr7 (61-128)||(33552940-33553007)
chr7 (21-136)||(38500007-38500122)
chr7 (81-138)||(27863846-27863903)
chr7 (29-133)||(23989581-23989685)
chr7 (20-112)||(45806565-45806657)
chr7 (4-137)||(40252179-40252301)
chr7 (1-131)||(18865120-18865249)
chr7 (52-137)||(3308372-3308457)
chr7 (20-81)||(33266572-33266633)
chr7 (61-133)||(33672957-33673029)
chr7 (1-136)||(119775-119911)
chr7 (47-133)||(46280374-46280460)
chr7 (1-73)||(420289-420361)
chr7 (93-132)||(11619347-11619386)
chr7 (1-137)||(30571000-30571128)
chr7 (4-135)||(34464285-34464415)
chr7 (101-136)||(40377997-40378032)
chr7 (20-135)||(45004633-45004748)
chr7 (64-131)||(47795838-47795905)
chr7 (20-129)||(28900760-28900870)
chr7 (61-139)||(39393695-39393772)
chr7 (29-79)||(48140139-48140189)
chr7 (29-70)||(31247666-31247707)
chr7 (101-133)||(28210324-28210356)
chr7 (20-68)||(45806414-45806462)
chr7 (81-133)||(46139821-46139873)
chr7 (61-139)||(7612331-7612410)
chr7 (74-125)||(17248434-17248485)
chr7 (46-81)||(17983715-17983750)
chr7 (20-79)||(20526369-20526428)
chr7 (61-124)||(21619295-21619358)
chr7 (6-57)||(28613608-28613659)
chr7 (41-132)||(38138588-38138679)
chr7 (26-136)||(40196243-40196350)
chr7 (22-116)||(20428353-20428447)
chr7 (61-131)||(20881755-20881825)
chr7 (93-131)||(22296366-22296404)
chr7 (4-74)||(39279891-39279960)
chr7 (20-61)||(39279704-39279745)
chr7 (106-139)||(45593411-45593444)
chr7 (101-133)||(7512313-7512345)
chr7 (37-69)||(31247633-31247665)
chr7 (81-125)||(39967805-39967849)
chr7 (101-137)||(46407074-46407110)
chr7 (63-131)||(47177517-47177585)
[»] chr5 (49 HSPs)
chr5 (20-136)||(3735579-3735695)
chr5 (1-137)||(32372489-32372625)
chr5 (20-131)||(12554334-12554445)
chr5 (47-130)||(7319126-7319209)
chr5 (41-137)||(7706085-7706184)
chr5 (20-131)||(24030490-24030601)
chr5 (20-137)||(12857793-12857910)
chr5 (30-139)||(25461853-25461962)
chr5 (2-132)||(40426632-40426765)
chr5 (29-138)||(16458075-16458188)
chr5 (64-128)||(19460508-19460572)
chr5 (1-65)||(35445992-35446056)
chr5 (4-131)||(10639825-10639951)
chr5 (61-139)||(9202867-9202945)
chr5 (66-135)||(16938001-16938070)
chr5 (29-134)||(32941339-32941443)
chr5 (47-140)||(40439070-40439162)
chr5 (29-133)||(31051767-31051871)
chr5 (30-137)||(25460957-25461064)
chr5 (61-132)||(28776855-28776926)
chr5 (61-120)||(39105356-39105415)
chr5 (30-128)||(25461744-25461842)
chr5 (20-81)||(42500313-42500374)
chr5 (61-131)||(6096427-6096494)
chr5 (20-132)||(13697847-13697959)
chr5 (47-131)||(26005353-26005437)
chr5 (41-121)||(34669836-34669916)
chr5 (68-133)||(32703574-32703639)
chr5 (29-76)||(3932782-3932830)
chr5 (61-129)||(34736645-34736713)
chr5 (57-109)||(42646548-42646600)
chr5 (61-131)||(10771997-10772068)
chr5 (101-132)||(12433539-12433570)
chr5 (93-131)||(3520302-3520340)
chr5 (41-135)||(32009857-32009951)
chr5 (61-134)||(42573898-42573972)
chr5 (61-122)||(7984868-7984929)
chr5 (37-74)||(15015779-15015816)
chr5 (29-74)||(29925769-29925814)
chr5 (69-133)||(34590355-34590420)
chr5 (29-74)||(36227723-36227768)
chr5 (61-125)||(465841-465905)
chr5 (61-129)||(1465138-1465206)
chr5 (81-125)||(10502557-10502601)
chr5 (29-89)||(12857435-12857494)
chr5 (50-122)||(35299617-35299689)
chr5 (93-133)||(37112398-37112438)
chr5 (101-133)||(42100198-42100230)
chr5 (93-133)||(42228030-42228070)
[»] chr4 (49 HSPs)
chr4 (1-139)||(17204001-17204139)
chr4 (1-139)||(50681158-50681296)
chr4 (2-132)||(19494784-19494914)
chr4 (20-136)||(43505824-43505938)
chr4 (4-108)||(41336655-41336758)
chr4 (20-115)||(31851343-31851436)
chr4 (20-132)||(25904298-25904414)
chr4 (3-140)||(45935291-45935421)
chr4 (61-133)||(35571951-35572022)
chr4 (23-137)||(24169126-24169240)
chr4 (1-137)||(54069486-54069623)
chr4 (42-134)||(18814960-18815051)
chr4 (23-137)||(29912814-29912928)
chr4 (61-139)||(50662851-50662929)
chr4 (26-81)||(33587048-33587103)
chr4 (61-139)||(3155476-3155554)
chr4 (61-139)||(22539166-22539244)
chr4 (61-131)||(44863081-44863151)
chr4 (20-89)||(15177290-15177359)
chr4 (21-90)||(22030116-22030184)
chr4 (37-118)||(1242380-1242457)
chr4 (20-135)||(44797759-44797868)
chr4 (2-81)||(42404068-42404147)
chr4 (29-139)||(15173397-15173506)
chr4 (29-67)||(20109515-20109553)
chr4 (64-133)||(26520351-26520421)
chr4 (76-137)||(27027-27088)
chr4 (29-74)||(31076483-31076528)
chr4 (61-133)||(1203236-1203303)
chr4 (93-133)||(4212811-4212851)
chr4 (13-73)||(13216285-13216345)
chr4 (93-133)||(27330186-27330226)
chr4 (37-137)||(46592315-46592415)
chr4 (83-131)||(47119086-47119134)
chr4 (61-131)||(2987069-2987140)
chr4 (64-131)||(11389407-11389474)
chr4 (101-140)||(34430832-34430871)
chr4 (20-86)||(3070061-3070127)
chr4 (41-114)||(16200090-16200164)
chr4 (95-137)||(20108904-20108946)
chr4 (95-137)||(39603594-39603636)
chr4 (101-131)||(49202527-49202557)
chr4 (102-131)||(25885756-25885785)
chr4 (61-133)||(30066885-30066958)
chr4 (101-142)||(34213737-34213778)
chr4 (101-129)||(22030092-22030120)
chr4 (101-133)||(23319727-23319759)
chr4 (61-133)||(35571747-35571818)
chr4 (101-137)||(39011215-39011251)
[»] scaffold0018 (1 HSPs)
scaffold0018 (20-139)||(157970-158089)
[»] scaffold0012 (1 HSPs)
scaffold0012 (29-125)||(207678-207774)
[»] scaffold0050 (1 HSPs)
scaffold0050 (66-131)||(58475-58540)


Alignment Details
Target: chr1 (Bit Score: 285; Significance: 1e-160; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 37473400 - 37473108
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37473400 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 37473301  T
Q  101 ataagctgcaaataagttgtttatccaaacaggcccttaacatttgtttcatgcttctgcaataaggcctttattttctgagccatatggagttattacc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37473300 ataagctgcaaataagttgtttatccaaacaggcccttaacatttgtttcaggcttctgcaataaggtctttattttctgagccatatggagttattacc 37473201  T
Q  201 ctacacctaaatatttattaattactaccttggttttatgctccccgttgctttgatgtgatcttgttggaggatgatttttcttgatgtgat 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37473200 ctacacctaaatatttattaattactaccttggttttatgctccccgttgctttgatgtgatcttgttggaggatgatttttcttgatgtgat 37473108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 14576722 - 14576858
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| |||| | |||||||| ||||||| ||| ||||  ||||||||||  | |||||||| |||||||||| ||||||||||| |||||||     
T  14576722 tagcatatacaaaaacaatttaactttattttatcctttactatggaaatagcttacatgagcttataaataagtgcttatcatgataagagcttgtgct 14576821  T
Q  101 ataagctgcaaataagttgtttatccaaacaggccct 137  Q
    |||||||| ||||||| ||||||||| ||||||||||    
T  14576822 ataagctggaaataagatgtttatcccaacaggccct 14576858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 17830136 - 17830025
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    |||||||| ||||||||||||||||||||||||||||||||| | |||| |||||||||| ||||||||||  ||||||  |||||||| | ||| ||||    
T  17830136 ttaactttattttatcatttgctataaaaatagcttatgtaatcgtatagataagtgcttatcatgataagtgcttgtgatataagctgaagatatgttg 17830037  T
Q  120 tttatccaaaca 131  Q
    ||||||||||||    
T  17830036 tttatccaaaca 17830025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 41195293 - 41195399
Alignment:
Q  31 ttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 130  Q
    ||||||||| |||||||||||| |||||||| |||||||||||| | || ||| ||||||  ||||||| |||||||||||||||||| |||||||||||    
T  41195293 ttatcatttactataaaaatagtttatgtaaacttatacataagcgattatcaggataagcgcttgtgctataagctgcaaataagttatttatccaaac 41195392  T
Q  131 aggccct 137  Q
    |||||||    
T  41195393 aggccct 41195399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 7 - 139
Target Start/End: Complemental strand, 14331784 - 14331652
Alignment:
Q  7 atacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagc 106  Q
    ||||| |||| | |||||||| ||||||| | | || || ||||||||||||| ||||||||||||||||||| |||||| |||  ||||||| ||||||    
T  14331784 atacaaaaacaatttaactttattttatcttgttctgtagaaatagcttatgttagcttatacataagtgcttatcatgagaagcgcttgtgctataagc 14331685  T
Q  107 tgcaaataagttgtttatccaaacaggccctta 139  Q
    | |||||||| |||||||| ||||||| |||||    
T  14331684 ttcaaataagctgtttatctaaacagggcctta 14331652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 33541816 - 33541912
Alignment:
Q  40 gctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 136  Q
    |||||||||||| |||||  ||||||||||||||| |||| |||||||||  |||||||| |||| ||||||||||||||||||||||||| |||||    
T  33541816 gctataaaaatatcttattcaagcttatacataagcgcttatcatgataaacacttgtgctataaactgcaaataagttgtttatccaaactggccc 33541912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 38247409 - 38247316
Alignment:
Q  46 aaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcccttaa 140  Q
    |||| ||||||||| ||||||||||||||||| | ||||||||||  ||||||| ||||||||||||| || |||||||||||||||||||||||    
T  38247409 aaaacagcttatgtgagcttatacataagtgcatatcatgataagtgcttgtgctataagctgcaaat-agctgtttatccaaacaggcccttaa 38247316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 51688706 - 51688576
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    |||||| |||| |||| | ||| |||| ||||||| ||| ||| | |||||||| ||||||||||||| ||||   ||| |||||||||| |||||| |     
T  51688706 tagcatgtacaaaaacaatttatctttattttatcttttcctacataaatagctcatgtaagcttatatataaacacttatcatgataagcacttgtact 51688607  T
Q  101 ataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||||||||||||||||||||||||||    
T  51688606 ataagctgcaaataagttgtttatccaaaca 51688576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27976596 - 27976523
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    ||||||||||| |||| | |||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27976596 tagcatatacaaaaacaatttaactttgttcaatcatttgctataaaaatagcttatgtaagcttatacataag 27976523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 47498962 - 47499033
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 132  Q
    |||||||||| ||| |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  47498962 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 47499033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 3234111 - 3234229
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    ||||| |||||||||| |||||||| || |||||||||| | ||||||| ||||| |||| ||||||||||  ||||||| ||||| |||||| |||||     
T  3234111 ttaacgttgttttatcttttgctatgaatatagcttatgcacgcttatatataagcgcttatcatgataagcgcttgtgctataagttgcaaacaagtta 3234210  T
Q  120 tttatccaaacaggccctt 138  Q
     ||||||||||| ||||||    
T  3234211 gttatccaaacaagccctt 3234229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 5741622 - 5741528
Alignment:
Q  42 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 136  Q
    |||||||||||||||||||| |||||||||||| |||| |||||||| |  ||||||| ||||||  |||||||| | |||||||||||||||||    
T  5741622 tataaaaatagcttatgtaaacttatacataagcgcttatcatgataggtgcttgtgctataagccacaaataagatatttatccaaacaggccc 5741528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 1510407 - 1510516
Alignment:
Q  30 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    |||||| |||| | |||||||||||| || ||||||||| |||||||||| ||| ||||||  ||||||| ||||| | |||||||| ||||||||||||    
T  1510407 tttatcttttgttttaaaaatagcttttgcaagcttatatataagtgcttatcaagataagcgcttgtgctataagatacaaataagctgtttatccaaa 1510506  T
Q  130 caggccctta 139  Q
    |||| |||||    
T  1510507 caggtcctta 1510516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 5894282 - 5894354
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||||| |||| |||||||||| |||||||| ||||||| |||||||| ||||||||||||||||    
T  5894282 agcttatacataagcgcttatcatgataagcacttgtgctataagcttcaaataagctgtttatccaaacagg 5894354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 43990248 - 43990118
Alignment:
Q  5 atatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtg---cttgtcatgataagaacttgtgcaa 101  Q
    |||||||||||| | ||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||||    || |||||| ||   ||||||| |    
T  43990248 atatacataaacaatttaactttgttttatcacttgccataaaaatagtttatgtgagcttatacataagtgtttattatcatgacaaacgcttgtgcta 43990149  T
Q  102 taagctgcaaataagttgtttatccaaacag 132  Q
    ||| ||||||||| | | |||||||||||||    
T  43990148 taaactgcaaatacgctatttatccaaacag 43990118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 17727207 - 17727302
Alignment:
Q  44 taaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    ||||||||||||||| || ||||||  |||| |||| || |||||||  ||||||| ||||||| || ||||||||||||||||||||||||||||    
T  17727207 taaaaatagcttatgcaaccttatatctaagcgcttatcttgataagtgcttgtgctataagctacacataagttgtttatccaaacaggccctta 17727302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 30191973 - 30191863
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    |||||||| ||||||  |||||||||||||||||||| |||  |||||||| |||||||| |||| ||||| |||| ||| ||||| || ||||||| |     
T  30191973 ttaactttattttattttttgctataaaaatagcttaggtatacttatacacaagtgcttatcataataagcacttctgctataagttgtaaataagcta 30191874  T
Q  120 tttatccaaac 130  Q
    |||||||||||    
T  30191873 tttatccaaac 30191863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 41505648 - 41505554
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcc 135  Q
    |||||||||||||||||||||||  || ||||||  ||| |||| |||||   |||||| |||||||||||||||| ||||||||||||||||||    
T  41505648 ctataaaaatagcttatgtaagccaatgcataagcacttatcatcataagcgtttgtgctataagctgcaaataagctgtttatccaaacaggcc 41505554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 44932004 - 44932139
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| |||| | ||||||||   ||||| ||||||||||| |||| ||||| |||||||||| ||||||||| ||||||||||   |  ||      
T  44932004 tagcatatacaaaaacaatttaacttt---ttatcttttgctataaatatagtttatgcaagcttatacctaagtgcttatcatgataagtgttaatgtt 44932100  T
Q  101 ataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    ||| |||||||| ||  ||||||||||||||||||||||    
T  44932101 atatgctgcaaacaaactgtttatccaaacaggccctta 44932139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 5720941 - 5720847
Alignment:
Q  42 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 136  Q
    ||||||||||||||| |||| |||||||||||| |||| |||||||| |  ||||||  ||||||  |||||||| | |||||||||||||||||    
T  5720941 tataaaaatagcttacgtaaacttatacataagcgcttatcatgataggtgcttgtgttataagccacaaataagatatttatccaaacaggccc 5720847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 29904741 - 29904633
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    |||| ||| ||||||| ||||||||||||||||||||| | ||||||| ||||||   || ||||||||||  ||||  | |||||||||| ||||||||    
T  29904741 ttaaatttattttatcttttgctataaaaatagcttatatgagcttat-cataagcttttatcatgataagcgcttgaactataagctgcatataagttg 29904643  T
Q  120 tttatccaaa 129  Q
    ||||||||||    
T  29904642 tttatccaaa 29904633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 24552455 - 24552517
Alignment:
Q  47 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc 109  Q
    ||||||||||||||||||| |||||||| |||| |||||||||  |||||||| |||||||||    
T  24552455 aaatagcttatgtaagcttgtacataagcgcttatcatgataatcacttgtgctataagctgc 24552517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 49938714 - 49938653
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 81  Q
    ||||||||  |||||| ||||||||| ||||||||||||| |||||||||||||| ||||||    
T  49938714 ttaactttaatttatcctttgctatagaaatagcttatgtgagcttatacataagcgcttgt 49938653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 27820479 - 27820531
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||||||  ||| ||| |||||||||||||||||||||||||||||||||    
T  27820479 tcatgataagcgcttatgctataagctgcaaataagttgtttatccaaacagg 27820531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30582017 - 30582081
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagctt 65  Q
    ||||||||||| |||| | |||||||| ||||||| ||| ||||||||||| |||||||||||||    
T  30582017 tagcatatacaaaaacaagttaactttattttatctttttctataaaaataccttatgtaagctt 30582081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 31774146 - 31774223
Alignment:
Q  37 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 118  Q
    ||||||||||||||||||||||    |||||| |||||||||| | |||||||| |||| | | ||||||||||||||||||    
T  31774146 tttgctataaaaatagcttatg----cttataaataagtgcttattatgataagcacttatactataagctgcaaataagtt 31774223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 47432097 - 47432033
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagctt 65  Q
    |||||||| || |||| | |||||||| ||||||| ||| |||||||||||||||||||||||||    
T  47432097 tagcatattcaaaaacaatttaactttattttatctttttctataaaaatagcttatgtaagctt 47432033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 18556900 - 18556821
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctg 108  Q
    ||||||| ||||| |||||||||||||||  ||||||||||| ||| ||| |||| ||||||  ||||||| ||||||||    
T  18556900 ttttatcttttgcaataaaaatagcttatacaagcttatacacaagcgctcgtcacgataagtgcttgtgctataagctg 18556821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 22344029 - 22343954
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 136  Q
    ||||||| ||||||  ||| ||||||||||  |||||||  |||| ||||||||||||| ||||||||||||||||    
T  22344029 agcttatgcataagctcttatcatgataagcgcttgtgcggtaagttgcaaataagttgattatccaaacaggccc 22343954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 23198448 - 23198364
Alignment:
Q  37 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 125  Q
    ||||||||||||||||||||||    |||||| ||||||| || | |||||||| |||| ||  |||||||||||||||||| ||||||    
T  23198448 tttgctataaaaatagcttatg----cttataaataagtgtttattatgataagcacttatgttataagctgcaaataagttttttatc 23198364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 24562452 - 24562503
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 132  Q
    |||||||||| || ||||| |||||||||||||||| |||||||||||||||    
T  24562452 tcatgataagcacatgtgctataagctgcaaataagctgtttatccaaacag 24562503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 37769748 - 37769851
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    |||||||| |||||||||||||||||||||||  ||||||||  ||||||||||  | ||      ||||| |||||||| ||| |||| ||||||||||    
T  37769748 ttaactttattttatcatttgctataaaaataatttatgtaaatttatacataatcgttt------ataagtacttgtgctataggctgtaaataagttg 37769841  T
Q  120 tttatccaaa 129  Q
    ||||| ||||    
T  37769842 tttattcaaa 37769851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 473066 - 473029
Alignment:
Q  102 taagctgcaaataagttgtttatccaaacaggccctta 139  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  473066 taagctgcaaataagttgtttatccaaacagaccctta 473029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 42391326 - 42391241
Alignment:
Q  42 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatcca 127  Q
    ||||||||||| ||| | |||||||||||||||  ||| ||||||||||   ||||||  ||||| |||||||| |||||||||||    
T  42391326 tataaaaatagtttaagcaagcttatacataagcacttatcatgataagcttttgtgctgtaagccgcaaataaattgtttatcca 42391241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 51190765 - 51190720
Alignment:
Q  94 ttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    |||||| ||||||| ||||||||||||||||||||||||| |||||    
T  51190765 ttgtgctataagctacaaataagttgtttatccaaacaggacctta 51190720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 2295065 - 2294982
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||| ||||||||||||||||||||| ||||||  ||| ||||||||||          ||||||||||||||||||| |||||||||||||    
T  2295065 ctatagaaatagcttatgtaagcttatgcataagcacttatcatgataag---------cataagctgcaaataagttgcttatccaaacagg 2294982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 34795565 - 34795609
Alignment:
Q  93 cttgtgcaataagctgcaaataagttgtttatccaaacaggccct 137  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||    
T  34795565 cttgtgctataagatgcaaataagctgtttatccaaacaggccct 34795609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 45855770 - 45855730
Alignment:
Q  93 cttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  45855770 cttgtgctataagctgcaaataagttggttatccaaacagg 45855730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 3887760 - 3887791
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacag 132  Q
    ||||||||||||||||||||||||||||||||    
T  3887760 ataagctgcaaataagttgtttatccaaacag 3887791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 25549085 - 25549157
Alignment:
Q  42 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 118  Q
    |||||||||||||||||    |||||| |||||||||| | |||||||| || | ||| ||||||||||||||||||    
T  25549085 tataaaaatagcttatg----cttataaataagtgcttattatgataagcacctatgccataagctgcaaataagtt 25549157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 27146369 - 27146436
Alignment:
Q  63 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 130  Q
    |||||||||||  |||| |||||||| | |||| ||| |||||||||||||||| | |||||||||||    
T  27146369 cttatacataaacgcttatcatgatatgtacttatgctataagctgcaaataagctatttatccaaac 27146436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 30581803 - 30581683
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||| | |||| | |||||||| ||| ||| ||| ||||||||||||||||||||          ||| ||||| |||||| ||| |||||| |     
T  30581803 tagcatataaaaaaacaatttaactttatttcatcgttttctataaaaatagcttatgta----------taactgcttatcatgaaaagtacttgttct 30581714  T
Q  101 ataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||||||||||  ||||||||||||||    
T  30581713 ataagctgcaaataaactgtttatccaaaca 30581683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 33546599 - 33546654
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 136  Q
    |||||||||  ||||||||  |||||||| |||||| |||||||||||||||||||    
T  33546599 tcatgataaacacttgtgctttaagctgcgaataagctgtttatccaaacaggccc 33546654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 38189695 - 38189656
Alignment:
Q  92 acttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  38189695 acttgtgctataaactgcaaataagttgtttatccaaaca 38189656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 43589506 - 43589597
Alignment:
Q  30 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtt 121  Q
    ||||||||||||||||| ||||| || |  || ||||||||||||||||| |||| ||||   ||| ||| |||| ||| ||||||||||||    
T  43589506 tttatcatttgctataacaatagtttgtacaaacttatacataagtgcttatcataataaaggcttatgctataaactgtaaataagttgtt 43589597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 1509717 - 1509623
Alignment:
Q  37 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||||| ||||||||| | ||| ||||||||| |||||  ||| ||||||||||   ||||||  ||||||  ||||||| ||||||||||||||    
T  1509717 tttgctgtaaaaataggtcatgcaagcttatatataagcacttatcatgataagtgattgtgctgtaagctaaaaataagctgtttatccaaaca 1509623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 1829075 - 1829145
Alignment:
Q  63 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||| |||| ||||||||||   || ||| ||| | | |||||||||||||||||||||||||    
T  1829075 cttatacataagcgcttatcatgataagtgtttatgctataggtttcaaataagttgtttatccaaacagg 1829145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 5709522 - 5709432
Alignment:
Q  42 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 132  Q
    ||||||||||||| ||  |||| |||||||||| |||| | ||||||     |||||| ||||||| ||||||||||||| ||||||||||    
T  5709522 tataaaaatagctaatacaagcatatacataagcgcttataatgatacttgtttgtgctataagcttcaaataagttgttcatccaaacag 5709432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 16145060 - 16145130
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataag 90  Q
    ||||| || ||||||||||| ||||| |||||  ||||||||||||||| ||||||| || | ||||||||    
T  16145060 ttaacattattttatcattttctatagaaataatttatgtaagcttataaataagtgtttattatgataag 16145130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24915120 - 24915182
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagc 63  Q
    ||||||||||| |||| | |||||||| ||||||| | ||||||| |||||| ||||||||||    
T  24915120 tagcatatacaaaaacaatttaactttattttatcttctgctatagaaatagtttatgtaagc 24915182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 43230894 - 43230948
Alignment:
Q  82 catgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 136  Q
    |||||| || |||||||| ||||||| |||| || ||||||||||||||||||||    
T  43230894 catgatgagcacttgtgctataagctccaaacaatttgtttatccaaacaggccc 43230948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 131
Target Start/End: Complemental strand, 46423181 - 46423151
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||||||||||||||||||||||||||    
T  46423181 ataagctgcaaataagttgtttatccaaaca 46423151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 14385838 - 14385927
Alignment:
Q  7 atacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttg 96  Q
    ||||| |||| | ||||| || || |||| |||||||||||||||| || ||  ||||||||||||||  ||| |||||||||| |||||    
T  14385838 atacaaaaacaatttaacattattctatcttttgctataaaaatagtttctgccagcttatacataagctcttatcatgataagcacttg 14385927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 130
Target Start/End: Complemental strand, 39906553 - 39906524
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaac 130  Q
    ||||||||||||||||||||||||||||||    
T  39906553 ataagctgcaaataagttgtttatccaaac 39906524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 45975638 - 45975569
Alignment:
Q  64 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||||||| |||| ||||||||||   |||||  ||||||| |||||||| | ||||||||||||||    
T  45975638 ttatacataagggcttatcatgataagtgtttgtgttataagctacaaataagctatttatccaaacagg 45975569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 7069251 - 7069183
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    ||||||||| ||||||||| ||| |||||  ||  |||| |||||||| ||||||| ||||||||||||    
T  7069251 agcttatacttaagtgcttatcacgataaataccagtgctataagctggaaataagctgtttatccaaa 7069183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 9572247 - 9572299
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||| | |||||||| |||||||||||||||||| || || ||||||||    
T  9572247 tcatgataggcacttgtgctataagctgcaaataagttattcattcaaacagg 9572299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 10666014 - 10665960
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgc---aaataagttgtttatccaaacag 132  Q
    |||||||||| | |||||| |||||||||   |||||||||||||||||||||||    
T  10666014 tcatgataagcatttgtgctataagctgctgtaaataagttgtttatccaaacag 10665960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 15609067 - 15609035
Alignment:
Q  27 tgttttatcatttgctataaaaatagcttatgt 59  Q
    ||||||||| |||||||||||||||||||||||    
T  15609067 tgttttatcttttgctataaaaatagcttatgt 15609035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 129
Target Start/End: Original strand, 27970432 - 27970460
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaa 129  Q
    |||||||||||||||||||||||||||||    
T  27970432 ataagctgcaaataagttgtttatccaaa 27970460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 37617563 - 37617607
Alignment:
Q  93 cttgtgcaataagctgcaaataagttgtttatccaaacaggccct 137  Q
    ||||||| ||||||||||||||| |||||||| |||||| |||||    
T  37617563 cttgtgctataagctgcaaataaattgtttatacaaacatgccct 37617607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 38189731 - 38189695
Alignment:
Q  30 tttatcatttgctataaaaatagcttatgtaagctta 66  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  38189731 tttatcttttgctatagaaatagcttatgtaagctta 38189695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 42174829 - 42174785
Alignment:
Q  30 tttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    |||||| |||| |||||||||||| |||| |||||||||||||||    
T  42174829 tttatcttttgatataaaaatagcctatgcaagcttatacataag 42174785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 45145166 - 45145130
Alignment:
Q  100 aataagctgcaaataagttgtttatccaaacaggccc 136  Q
    |||||||||||||||||| |||||||||| |||||||    
T  45145166 aataagctgcaaataagtagtttatccaatcaggccc 45145130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 49825095 - 49825147
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaat 113  Q
    ||||||||||||| ||| | ||||||||||  |||||||||||||||| ||||    
T  49825095 agcttatacataaatgcatatcatgataagctcttgtgcaataagctgaaaat 49825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 49938657 - 49938613
Alignment:
Q  93 cttgtgcaataagctgcaaataagttgtttatccaaacaggccct 137  Q
    ||||||| |||||||||| ||||| | ||||||||||||||||||    
T  49938657 cttgtgctataagctgcagataagctttttatccaaacaggccct 49938613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 9e-36; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 1058143 - 1058279
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| ||||   |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||  ||||  |||||||     
T  1058143 tagcatatacaaaaacagattaactttattttatgatttgctataaaaatagcttatgtaagcttatacataagcgcttatcatagtaagcgcttgtgct 1058242  T
Q  101 ataagctgcaaataagttgtttatccaaacaggccct 137  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  1058243 ataagctgcaaataagctgtttattcaaacaggccct 1058279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 14956406 - 14956502
Alignment:
Q  43 ataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||   |||||| ||||||||||||||||||||||||||||||| |||||||    
T  14956406 ataaaaatagcttatgcaagcttatacataagtgcttatcatgataagcgattgtgctataagctgcaaataagttgtttatccaaacaagccctta 14956502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 36963442 - 36963553
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    ||||||| ||||||| | |||||||||| | |||||||| | |||| | || ||||||||||  ||||||| ||||||||||||||| ||||||| ||||    
T  36963442 ttttatcttttgctagagaaatagcttaagaaagcttatccgtaagcgtttatcatgataagcgcttgtgctataagctgcaaataaattgtttacccaa 36963541  T
Q  129 acaggcccttaa 140  Q
    |||| |||||||    
T  36963542 acagacccttaa 36963553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 12976195 - 12976086
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    |||||||| ||||||  ||||||||| ||||||||||||| |||||||||||||| |||| ||||||| ||  | |||||    ||||||||||||| ||    
T  12976195 ttaactttattttatattttgctatagaaatagcttatgtgagcttatacataagcgcttatcatgatgagtgcctgtgc---tagctgcaaataagctg 12976099  T
Q  120 tttatccaaacag 132  Q
    |||||||||||||    
T  12976098 tttatccaaacag 12976086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 38750319 - 38750229
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||||||  | ||| |   ||||| |||||||||||||||||||||||    
T  38750319 ctataaaaatagcttatgcaagcttatacataagcgcttatcatgataagtgcatgtacttcaagcttcaaataagttgtttatccaaaca 38750229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 9130409 - 9130506
Alignment:
Q  31 ttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    ||||| || |||| ||||||||||||||  |||||||||||||||| || ||||||| |  |||||||| |||||||||||||||| | |||||||||    
T  9130409 ttatctttagctacaaaaatagcttatgcgagcttatacataagtgattatcatgatgaccacttgtgctataagctgcaaataagctatttatccaa 9130506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 35534686 - 35534813
Alignment:
Q  7 atacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagc 106  Q
    ||||| |||| | |||||||| ||||||| ||| ||||||||||| ||||||||||||||| |||| | |||| | |||||||   | ||||| ||||||    
T  35534686 atacaaaaacaatttaactttattttatctttt-ctataaaaatatcttatgtaagcttatgcata-gcgcttataatgataaacgcctgtgctataagc 35534783  T
Q  107 tgcaaataagttgtttatccaaacaggccc 136  Q
    |||||||||| ||||| |||||||||||||    
T  35534784 tgcaaataagctgtttttccaaacaggccc 35534813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12497300 - 12497372
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataa 73  Q
    ||||||||||| |||| | |||||||| ||||||| |||||||||||||| ||||||| ||||||||||||||    
T  12497300 tagcatatacaaaaacaagttaactttattttatcttttgctataaaaatggcttatgcaagcttatacataa 12497372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 41821528 - 41821425
Alignment:
Q  31 ttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 130  Q
    ||||| ||| |||||| || ||| || | |||||||||||||||||||| |||||||||| ||||||||  ||||||||||||||| |||| |  |||||    
T  41821528 ttatctttttctataataacagcgtacgcaagcttatacataagtgcttatcatgataagcacttgtgc--taagctgcaaataagctgttaagtcaaac 41821431  T
Q  131 aggccc 136  Q
    ||||||    
T  41821430 aggccc 41821425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 29168149 - 29168250
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||||  ||| | |||||||   ||||||| |||||||||| ||||  ||| |||||||    
T  29168149 ttttatcttttgctatagaaatagcttatgtgagcttatacataagcacttttgatgataaacgcttgtgctataagctgcagataacctgtgtatccaa 29168248  T
Q  129 ac 130  Q
    ||    
T  29168249 ac 29168250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 32976033 - 32975930
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    ||||||| |||||||||||||||||||||| ||||||||| |||||  ||| |||| ||||   |||||||  ||||||| |||| | ||||||||| ||    
T  32976033 ttttatcttttgctataaaaatagcttatgcaagcttatatataagcacttatcataataactgcttgtgctctaagctgaaaatcacttgtttatctaa 32975934  T
Q  129 acag 132  Q
    ||||    
T  32975933 acag 32975930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 42043442 - 42043521
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctg 108  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||| || | ||||| | |||||  ||||||||    
T  42043442 ttttatcttttgctatagaaatagcatatgtaagcttatacataagtgcttatcgtaataagcagttgtgacataagctg 42043521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 40637407 - 40637486
Alignment:
Q  42 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 125  Q
    |||||||||||||||||    |||||| |||||||||| | |||||||| |||| ||| |||||||||||||||||| ||||||    
T  40637407 tataaaaatagcttatg----cttataaataagtgcttattatgataagcacttatgctataagctgcaaataagttttttatc 40637486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 10758325 - 10758414
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataag 90  Q
    ||||||||||| |||| | |||||||| |||||| |||||||||| |||||| ||| || |||||||||||||   ||| ||||||||||    
T  10758325 tagcatatacaaaaacaatttaactttattttatgatttgctatagaaatagtttacgtgagcttatacataatcacttatcatgataag 10758414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 38353322 - 38353242
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgca 110  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||||| | || |||||||||| ||||||   ||||||||||    
T  38353322 ttttatcttttgc-ataaaaatagcttatgcaagcttatacataagcgattatcatgataagcacttgtaatataagctgca 38353242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 26215447 - 26215375
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||||| |||| |||| |||||  || |||| |||||||| ||||||||||||||| ||||||||    
T  26215447 agcttatacataagcgcttatcattataagcgctcgtgctataagctgaaaataagttgtttatacaaacagg 26215375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 29819029 - 29819085
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccct 137  Q
    ||||||||||  ||| ||| |||||||||||||||||||||||||||||||| ||||    
T  29819029 tcatgataagcccttttgctataagctgcaaataagttgtttatccaaacagaccct 29819085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 40981057 - 40980993
Alignment:
Q  75 tgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    ||||| ||| ||||||  ||||||| |||||||||||||||| |||||||||||||||| |||||    
T  40981057 tgcttatcaagataagcgcttgtgctataagctgcaaataagctgtttatccaaacagggcctta 40980993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 10628183 - 10628267
Alignment:
Q  37 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 125  Q
    ||||||||||||||||||||||    |||||| ||||||| || | |||||||| |||| ||  |||||||||||||||||| ||||||    
T  10628183 tttgctataaaaatagcttatg----cttataaataagtgtttattatgataagcacttatgttataagctgcaaataagttttttatc 10628267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 15180512 - 15180406
Alignment:
Q  31 ttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 130  Q
    ||||| |||||| || ||||| |||||| || |||||| |||||| ||  |||||||| |  ||||||| ||||||| ||||||||||||||||| |||     
T  15180512 ttatcttttgctgtacaaataacttatgcaaacttatagataagttctcatcatgatacgcgcttgtgctataagcttcaaataagttgtttatctaaa- 15180414  T
Q  131 aggccctt 138  Q
    ||||||||    
T  15180413 aggccctt 15180406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 18133586 - 18133551
Alignment:
Q  102 taagctgcaaataagttgtttatccaaacaggccct 137  Q
    ||||||||||||||||||||||||||||||||||||    
T  18133586 taagctgcaaataagttgtttatccaaacaggccct 18133551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 136
Target Start/End: Complemental strand, 28763338 - 28763239
Alignment:
Q  37 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 136  Q
    ||||||||||||||||| ||||  ||| ||||||||| | ||| ||||||||||   || ||| ||||| | |||||||| ||||||| |||||||||||    
T  28763338 tttgctataaaaatagcctatgccagcatatacataaattcttatcatgataagtgtttatgctataagttacaaataagctgtttatacaaacaggccc 28763239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 34236112 - 34236041
Alignment:
Q  62 gcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||| |||||| |||| |||||||||    |||||  |||||||||||||||||||||||||||||||||    
T  34236112 gcttatccataagggcttatcatgataaccgtttgtgttataagctgcaaataagttgtttatccaaacagg 34236041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 11861789 - 11861728
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 81  Q
    |||||||| |||| |  ||||||||| ||||||||||||| |||||||||||||||| ||||    
T  11861789 ttaactttattttgttctttgctatagaaatagcttatgtgagcttatacataagtgtttgt 11861728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 41475179 - 41475248
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 130  Q
    ||||||||||||||||||| |||||| |||   ||||   ||||| ||||||||||||||||||||||||    
T  41475179 agcttatacataagtgcttatcatgacaagtgtttgtcttataagttgcaaataagttgtttatccaaac 41475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 25930624 - 25930696
Alignment:
Q  2 agcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    |||||||||| ||||   |||| ||| ||| ||| ||| ||||| ||||||||||||||||||||||||||||    
T  25930624 agcatatacaaaaacattttaattttatttcatcctttcctatagaaatagcttatgtaagcttatacataag 25930696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 40859837 - 40859885
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc 109  Q
    |||||||||||||| |||| |||||||||| |||||||| |||||||||    
T  40859837 agcttatacataagcgcttatcatgataagcacttgtgctataagctgc 40859885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 2840310 - 2840239
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc-aaataagttgtttatccaaaca 131  Q
    ||||||| ||||||  ||| |||||||||| |||| ||| ||||||||| ||||||||||||||| ||||||    
T  2840310 agcttattcataagcacttatcatgataagcacttatgctataagctgcaaaataagttgtttatacaaaca 2840239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 2844997 - 2844926
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc-aaataagttgtttatccaaaca 131  Q
    ||||||| ||||||  ||| |||||||||| |||| ||| ||||||||| ||||||||||||||| ||||||    
T  2844997 agcttattcataagcacttatcatgataagcacttatgctataagctgcaaaataagttgtttatacaaaca 2844926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 9956951 - 9956998
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    ||||||||||  ||||||| ||||||| ||||||||||||||||||||    
T  9956951 tcatgataagtgcttgtgctataagctacaaataagttgtttatccaa 9956998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 30251539 - 30251598
Alignment:
Q  22 aactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 81  Q
    |||||| ||||| | ||||||||  ||||||||| ||||| |||||||||||||||||||    
T  30251539 aactttattttaacttttgctatcgaaatagcttgtgtaaccttatacataagtgcttgt 30251598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 900821 - 900887
Alignment:
Q  67 tacataagtgcttgtcatgataagaacttgtgcaataagctgcaaata-agttgtttatccaaacag 132  Q
    |||||||||| || ||||||||||   |||||| ||||| |||||||| ||||||||||||||||||    
T  900821 tacataagtgtttatcatgataagcgtttgtgctataagatgcaaatatagttgtttatccaaacag 900887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 131
Target Start/End: Complemental strand, 27752463 - 27752433
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||||||||||||||||||||||||||    
T  27752463 ataagctgcaaataagttgtttatccaaaca 27752433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 37353373 - 37353439
Alignment:
Q  67 tacataagtgcttgtcatgataagaacttgtgcaataagctgcaaat-aagttgtttatccaaacag 132  Q
    |||||||| |||| |||| ||||| | || ||| ||||||||||||| |||||||||||||||||||    
T  37353373 tacataagcgcttatcatcataagcatttatgctataagctgcaaatcaagttgtttatccaaacag 37353439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 16825625 - 16825686
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 81  Q
    ||||| || ||||||| ||| |||||| ||||||||||| ||| ||||||||||| ||||||    
T  16825625 ttaacattattttatcctttactataagaatagcttatgcaaggttatacataagcgcttgt 16825686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 4389873 - 4389817
Alignment:
Q  83 atgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaacaggccctt 138  Q
    |||||||| |||| ||| |||||||||||| |||||| |||||||||||||| ||||    
T  4389873 atgataagcacttctgctataagctgcaaaataagttatttatccaaacagggcctt 4389817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 5404568 - 5404500
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    |||||||| | ||||| || |||||||||| |||| | |  ||| ||||||||||||||||||||||||    
T  5404568 agcttatatacaagtggttatcatgataagcacttattctttaatctgcaaataagttgtttatccaaa 5404500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 133
Target Start/End: Complemental strand, 22790541 - 22790509
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||| ||||||||||||||||||||||||    
T  22790541 ataagctgtaaataagttgtttatccaaacagg 22790509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 27028799 - 27028751
Alignment:
Q  42 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataag 90  Q
    |||||||||| |||||||||||||||||| |||  ||| ||||||||||    
T  27028799 tataaaaataacttatgtaagcttatacaaaagcacttatcatgataag 27028751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 31716392 - 31716424
Alignment:
Q  105 gctgcaaataagttgtttatccaaacaggccct 137  Q
    |||||||||||||||||||||| ||||||||||    
T  31716392 gctgcaaataagttgtttatcctaacaggccct 31716424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 41589625 - 41589555
Alignment:
Q  70 ataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagt---tgtttatccaaacaggccct 137  Q
    ||||| |||| |||||||||   ||||||| |||||||||||||||||   | ||||||||||||||||||    
T  41589625 ataagcgcttatcatgataaatgcttgtgctataagctgcaaataagtttatttttatccaaacaggccct 41589555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 42052018 - 42051982
Alignment:
Q  37 tttgctataaaaatagcttatgtaagcttatacataa 73  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  42052018 tttgctataaaaagagcttatgcaagcttatacataa 42051982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 20880477 - 20880343
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| |||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||| | |||||||   |||||||     
T  20880477 tagcatatacaaaaacaatttaactt-gttttatcatttgctataaaaatagcttatgtaagcttatacataagcacttattatgataaccgcttgtgct 20880379  T
Q  101 ataagctgcaaataagttgtttatccaaacaggccc 136  Q
    |||| ||||||||||||||| |||||||||||||||    
T  20880378 ataaactgcaaataagttgtctatccaaacaggccc 20880343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 30956695 - 30956834
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    |||| |||||| |||| | |||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||  |||||||     
T  30956695 tagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgct 30956794  T
Q  101 ataagctgcaaataagttgtttatccaaacaggcccttaa 140  Q
    |||||||||||||||| |||||||||||||| | ||||||    
T  30956795 ataagctgcaaataagctgtttatccaaacatgaccttaa 30956834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 30972507 - 30972646
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    |||| |||||| |||| | |||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||  |||||||     
T  30972507 tagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgct 30972606  T
Q  101 ataagctgcaaataagttgtttatccaaacaggcccttaa 140  Q
    |||||||||||||||| |||||||||||||| | ||||||    
T  30972607 ataagctgcaaataagctgtttatccaaacatgaccttaa 30972646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 35959526 - 35959660
Alignment:
Q  2 agcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaa 101  Q
    |||||||||| |||  | |||||||| ||||||| ||| ||||| ||||||||||||| ||||||||||||||  ||| ||||||||||| ||||||  |    
T  35959526 agcatatacaaaaataatttaactttattttatccttttctatagaaatagcttatgtgagcttatacataagctcttatcatgataagagcttgtgata 35959625  T
Q  102 taagctgcaaataagttgtttatccaaacaggccc 136  Q
    ||||||||||||||| |||||||||||||| ||||    
T  35959626 taagctgcaaataagctgtttatccaaacaagccc 35959660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 24684892 - 24685028
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| |||| | | || ||| ||||||| ||| ||||||||||||||||||||| ||||| || ||| |||| ||||||| |||| ||||||     
T  24684892 tagcatatacaaaaacaattaaaatttattttatctttttctataaaaatagcttatgtaaacttatgcaaaagcgcttatcatgatgagaatttgtgct 24684991  T
Q  101 ataagctgcaaataagttgtttatccaaacaggccct 137  Q
    |||||||||||||||   || ||||||||||||||||    
T  24684992 ataagctgcaaataaaccgtctatccaaacaggccct 24685028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 31365391 - 31365478
Alignment:
Q  51 agcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctt 138  Q
    |||||||| |||||||||||||||||||| |||||||||  |||||||| |||||||||||||||| |||||||||| ||||| ||||    
T  31365391 agcttatgcaagcttatacataagtgcttatcatgataatcacttgtgctataagctgcaaataagctgtttatccacacaggtcctt 31365478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 140
Target Start/End: Original strand, 53789570 - 53789669
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcccttaa 140  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||||  ||||||  ||||||||||| ||||| ||||| ||||||||| ||||||    
T  53789570 ctatagaaatagcttatgtaagcttacacataagtgcttatcatgataagcgcttgtggcataagctgcaattaagtcgtttacccaaacagggccttaa 53789669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 20170524 - 20170389
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| |||| | ||||| || ||||||| |||||  |||||||||||| || ||||| ||||||||| |||| |||||| ||| | |||||      
T  20170524 tagcatatacaaaaacaatttaacattattttatcttttgcagtaaaaatagcttgtgcaagctgatacataagcgcttatcatgaaaagcagttgtgat 20170425  T
Q  101 ataagctgcaaataagttgtttatccaaacaggccc 136  Q
    |||| ||||||||||||||||| ||| |||||||||    
T  20170424 ataaactgcaaataagttgtttctcccaacaggccc 20170389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 1508677 - 1508779
Alignment:
Q  29 ttttatcatttgctataaaaa-tagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatcca 127  Q
    ||||||| |||||| |||||| ||| ||||| ||||||||||||||| |||| |||||||||| |||||||| ||||| |||||||||| ||||| ||||    
T  1508677 ttttatcttttgctttaaaaaatagtttatgcaagcttatacataagcgcttatcatgataagcacttgtgctataagttgcaaataagctgtttttcca 1508776  T
Q  128 aac 130  Q
    |||    
T  1508777 aac 1508779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 944459 - 944363
Alignment:
Q  38 ttgctataaaaatagcttatgtaagcttatacataagt-gcttgtcatgataagaactt-gtgcaataagctgcaaataagttgtttatccaaacag 132  Q
    |||||| |||||||||||||| |||||||||| ||||  |||| |||||||||| |||| |||  ||||||||||||||||||||||||||||||||    
T  944459 ttgctacaaaaatagcttatgcaagcttatacgtaagccgcttatcatgataagcacttagtgttataagctgcaaataagttgtttatccaaacag 944363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 2719448 - 2719341
Alignment:
Q  23 actttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgttt 122  Q
    ||||| ||||||  |||||| || ||||||||| ||||||||||| | ||||||||| ||||||||||   |||||| |||||||| ||||||| |||||    
T  2719448 actttattttatattttgctttagaaatagcttgtgtaagcttatgcgtaagtgcttatcatgataagcgtttgtgctataagctgtaaataagctgttt 2719349  T
Q  123 atccaaac 130  Q
    || |||||    
T  2719348 attcaaac 2719341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 19983752 - 19983642
Alignment:
Q  30 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    |||||| ||| ||||| ||||| |||||||||||||||||||||  |||| |||| ||||  | || ||| ||||  |||||||||||||||||||||||    
T  19983752 tttatctttttctatagaaataacttatgtaagcttatacataaacgcttatcataataaacaattatgctataaattgcaaataagttgtttatccaaa 19983653  T
Q  130 caggcccttaa 140  Q
     || |||||||    
T  19983652 gagacccttaa 19983642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 34235195 - 34235265
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    ||||| ||||||||||||| |||||||||| || ||| | ||||||| |||||||||||||||||||||||    
T  34235195 agcttctacataagtgcttatcatgataagcacatgtactataagctacaaataagttgtttatccaaaca 34235265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 36631120 - 36631250
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    |||||| |||| |||| | ||||||||  |||||| ||| ||||| |||||||||| |  || |||||||||| ||||| |||||||||| ||||||||     
T  36631120 tagcatgtacaaaaacaatttaactttactttatcctttactatagaaatagcttaagcgagtttatacataattgcttatcatgataagcacttgtgct 36631219  T
Q  101 ataagctgcaaataagttgtttatccaaaca 131  Q
    ||   ||| |||||||||||| |||||||||    
T  36631220 attgtctgaaaataagttgttaatccaaaca 36631250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 46778315 - 46778413
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 118  Q
    |||||||| |||||||  |||||||| ||||||||||| |||||| ||||||||| |||| ||||||||||   |||| | ||||| ||||||||||||    
T  46778315 ttaactttattttatctcttgctatagaaatagcttatataagctgatacataagcgcttatcatgataagtgtttgtactataaggtgcaaataagtt 46778413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 12862344 - 12862429
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaata 114  Q
    ||||||| |||||||||||||||| ||||| ||||||| |||||||||||| |||| |||||  ||| ||| |||| |||||||||    
T  12862344 ttttatcttttgctataaaaatagattatgcaagcttaaacataagtgcttatcattataagcgcttttgctataacctgcaaata 12862429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 28795944 - 28796025
Alignment:
Q  44 taaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 125  Q
    ||||||||| ||| ||||||||||||||||||| || |||||||||    |||||| |||||||| ||||||||||||||||    
T  28795944 taaaaatagtttaggtaagcttatacataagtgtttatcatgataaatgtttgtgctataagctgtaaataagttgtttatc 28796025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 3845671 - 3845763
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||| |||||||||||||||||||||||| |||  ||| | |  |||||  ||||||| || | ||||||||||||||||||||||||||||    
T  3845671 ctatagaaatagcttatgtaagcttatacaaaagcacttattacaataagtgcttgtgctatgaactgcaaataagttgtttatccaaacagg 3845763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 34034104 - 34034036
Alignment:
Q  69 cataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccct 137  Q
    ||||||||||| ||||||||||  | ||| | |||||||| ||||||||||||||||||||||||||||    
T  34034104 cataagtgcttatcatgataagcgcctgttctataagctgaaaataagttgtttatccaaacaggccct 34034036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 46886836 - 46886888
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  46886836 tcatgataagcacttatgctataagctgcaaataagttgtttatccaaacagg 46886888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 47132308 - 47132240
Alignment:
Q  71 taagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    ||||||||| ||||||||||  ||||||| ||||| || |||||||||||||||||||||||| |||||    
T  47132308 taagtgcttatcatgataagtgcttgtgctataaggtgaaaataagttgtttatccaaacagggcctta 47132240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 12833955 - 12833871
Alignment:
Q  37 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 125  Q
    |||||||||||||||||||||    ||||||| |||||||||| | |||||||| |||| ||| |||||||||| ||||||| ||||||    
T  12833955 tttgctataaaaatagcttat----gcttataaataagtgcttattatgataagcacttatgctataagctgcatataagttttttatc 12833871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 402660 - 402730
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    ||||||||||||||  ||| |||||||||| |||||||| || ||||||||||||||||||| | ||||||    
T  402660 agcttatacataagcccttatcatgataagcacttgtgctatgagctgcaaataagttgtttgttcaaaca 402730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 29520567 - 29520664
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 118  Q
    ||||| || |||| || |||||||||||| ||||||||| |||||||||||||||||||| | ||||||||   || ||| |||||||||||| |||||    
T  29520567 ttaacgttattttctcttttgctataaaa-tagcttatgcaagcttatacataagtgcttattatgataagtgtttatgctataagctgcaaaaaagtt 29520664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 39980692 - 39980610
Alignment:
Q  39 tgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtt 121  Q
    ||||||||||| |||| ||| || ||||||||||||||||| ||||||||||   |||| | |||||||||||||||| ||||    
T  39980692 tgctataaaaaaagctaatgcaaacttatacataagtgcttatcatgataagtgtttgtcctataagctgcaaataagctgtt 39980610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 7814244 - 7814321
Alignment:
Q  37 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 118  Q
    ||||||||||||||||||||||    |||||| |||||||||| | |||||||| |||| | | ||||||||||||||||||    
T  7814244 tttgctataaaaatagcttatg----cttataaataagtgcttattatgataagcacttatactataagctgcaaataagtt 7814321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 849590 - 849551
Alignment:
Q  94 ttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  849590 ttgtgctataagctgcaaataagttgtttatccaaacagg 849551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 20257497 - 20257422
Alignment:
Q  65 tatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcccttaa 140  Q
    |||||||||| |||| || ||||||   ||||||  ||||||||||||||| ||||| ||||||||||||||||||    
T  20257497 tatacataagcgcttatcgtgataaagtcttgtgttataagctgcaaataaattgttaatccaaacaggcccttaa 20257422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 584028 - 583974
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| ||||    
T  584028 ttaactttattttatcattttctatagaaataacttatgtaagcttatacgtaag 583974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 5331275 - 5331178
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 118  Q
    ||||| || |||| || |||||||||||| ||||||||| |||||||||||||||||||| | || |||||   || ||| |||||||||||| |||||    
T  5331275 ttaacgttattttctcttttgctataaaa-tagcttatgcaagcttatacataagtgcttattatcataagtgtttatgctataagctgcaaaaaagtt 5331178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 30443720 - 30443658
Alignment:
Q  46 aaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctg 108  Q
    ||||| ||||||||||||| || ||||| ||||| |||||||||| |||||||| ||||||||    
T  30443720 aaaattgcttatgtaagctcatgcataattgcttatcatgataagcacttgtgctataagctg 30443658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 139794 - 139875
Alignment:
Q  53 cttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggc 134  Q
    ||||||||||||||| |||||| |||| ||||||||||  | ||  | ||||||| |||||||||||  |||||||||||||    
T  139794 cttatgtaagcttatgcataagcgcttatcatgataagtgcctgcactataagctccaaataagttgcgtatccaaacaggc 139875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 466157 - 466062
Alignment:
Q  47 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaata--agctgcaaataagttgtttatccaaacaggcccttaa 140  Q
    |||||| |||||||||||||| |||||| |||| |||| |||||  ||||| | |||  |||| |||||||| |||| ||||||||||| ||||||    
T  466157 aaatagattatgtaagcttatgcataagagcttatcataataagtgcttgtactatattagctacaaataaggtgttaatccaaacagggccttaa 466062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 31403309 - 31403237
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||| |||||||||| | |||||||| ||||| || | || ||||||||||  ||||||||||||||||    
T  31403309 agcttatatataagtgcttatgatgataagcacttgggctagaaactgcaaataacctgtttatccaaacagg 31403237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 39602337 - 39602373
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacaggccct 137  Q
    |||||||||||||||||||||||||||| ||||||||    
T  39602337 ataagctgcaaataagttgtttatccaatcaggccct 39602373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 40665380 - 40665329
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa 112  Q
    ||||| |||| |||||||| ||||||||||||||| ||| ||||||||||||    
T  40665380 agcttgtacagaagtgcttatcatgataagaacttatgctataagctgcaaa 40665329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 7301320 - 7301266
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    ||||||||||||||| ||| ||||||||| |||| ||||||| || |||||||||    
T  7301320 ttaactttgttttattattagctataaaattagcatatgtaaactcatacataag 7301266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 10704670 - 10704708
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttat 67  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  10704670 ttttatcttttgctataaaagtagcttatgtaagcttat 10704708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 18405929 - 18405979
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgctt 79  Q
    ||||||| ||| ||||| ||||| |||||||||||||||||||||| ||||    
T  18405929 ttttatcttttcctatataaataacttatgtaagcttatacataagcgctt 18405979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 20003433 - 20003483
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||||| ||| |||| ||||||| |||||||||||||| ||||||||    
T  20003433 tcatgataagcactcgtgctataagctacaaataagttgtttctccaaaca 20003483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 26990607 - 26990681
Alignment:
Q  59 taagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||||| ||||||||||| ||||  ||||  ||||||  ||||| |||| |||||||||| |||||||||||    
T  26990607 taagcttattcataagtgcttatcattgtaagtgcttgtgttataagttgcatataagttgttgatccaaacagg 26990681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 29002961 - 29003031
Alignment:
Q  63 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||||| || |||||||||   ||| | | ||||||||||||||| || ||||||||||||||    
T  29002961 cttatacataagtgtttatcatgataaacgcttttactataagctgcaaataaattatttatccaaacagg 29003031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 10704708 - 10704745
Alignment:
Q  97 tgcaataagctgcaaataagttgtttatccaaacaggc 134  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  10704708 tgcattaagctgcaaataagctgtttatccaaacaggc 10704745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 23816002 - 23815949
Alignment:
Q  63 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataag 116  Q
    ||||||||||||||||| |||||||||| ||||  || ||||| ||||||||||    
T  23816002 cttatacataagtgcttatcatgataagcactttggctataagatgcaaataag 23815949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 130
Target Start/End: Original strand, 24085485 - 24085513
Alignment:
Q  102 taagctgcaaataagttgtttatccaaac 130  Q
    |||||||||||||||||||||||||||||    
T  24085485 taagctgcaaataagttgtttatccaaac 24085513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 28240257 - 28240213
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatc 125  Q
    ||||||||||  ||||||| |||||||||| ||||||||||||||    
T  28240257 tcatgataagcgcttgtgctataagctgcagataagttgtttatc 28240213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 34610945 - 34610993
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    ||||||||||  ||||||  |||||||||| ||||||||||||||||||    
T  34610945 tcatgataagcgcttgtgttataagctgcagataagttgtttatccaaa 34610993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 35328288 - 35328351
Alignment:
Q  67 tacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    ||||||||||||| |||| |||||  ||||| | |||||||||||||||| | ||||||||||||    
T  35328288 tacataagtgcttatcataataagcgcttgt-ctataagctgcaaataagctatttatccaaaca 35328351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 36507241 - 36507277
Alignment:
Q  93 cttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  36507241 cttgtgctataagctgcaaataagttgttcatccaaa 36507277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 37689211 - 37689147
Alignment:
Q  24 ctttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgata 88  Q
    |||| ||||||| ||||||||| ||||||||||||| | ||||||| ||||  ||| ||||||||    
T  37689211 ctttattttatcttttgctatagaaatagcttatgtgaacttatacgtaagcacttatcatgata 37689147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 42800032 - 42800117
Alignment:
Q  49 atagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 136  Q
    ||||||||||| |||||||||  || |||||  |||||||||  ||| ||| ||||||| |||||||| |||| ||||||||| ||||    
T  42800032 atagcttatgtgagcttatac--aaatgcttaacatgataagcgcttctgctataagctacaaataagctgttaatccaaacatgccc 42800117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 24626292 - 24626159
Alignment:
Q  5 atatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataa 104  Q
    ||||||| |||| | |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||   |  |||||||||| | |||||| ||||    
T  24626292 atatacaaaaacaatttaactttgttttatcctttcctatagaaatagcttatgtaagcttatacataagcaatcatcatgataagcatttgtgctataa 24626193  T
Q  105 gctgcaaataagttgtttatccaaacaggccctt 138  Q
    |||| |||||||||||||||||||||||| ||||    
T  24626192 gctgtaaataagttgtttatccaaacaggtcctt 24626159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 34430686 - 34430578
Alignment:
Q  32 tatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||| ||||| | ||| |||||||||| ||||||||||||||| || | |||||||||| |||||||| |||||||||||||||| |||||||| |||||    
T  34430686 tatcctttgcaaaaaatatagcttatggaagcttatacataagcgcctatcatgataagcacttgtgctataagctgcaaataagatgtttatcgaaaca 34430587  T
Q  132 ggcccttaa 140  Q
     ||||||||    
T  34430586 tgcccttaa 34430578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 6538488 - 6538383
Alignment:
Q  31 ttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 130  Q
    ||||| ||||||| |||| || |||||| ||||||||||||||| |||| |||| |||||  ||||||| |||||||||||||||| | |||||||||||    
T  6538488 ttatcttttgctaaaaaactaacttatgcaagcttatacataagcgcttatcattataagtgcttgtgctataagctgcaaataagctatttatccaaac 6538389  T
Q  131 aggccc 136  Q
    ||||||    
T  6538388 aggccc 6538383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 30926510 - 30926405
Alignment:
Q  30 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    |||||| ||| ||||| ||||||||||||||||||||||| ||| ||||| ||||||||||  ||||||| ||||||||| |  |||||||||||| |||    
T  30926510 tttatcttttactatagaaatagcttatgtaagcttatacttaattgcttatcatgataagcccttgtgctataagctgcca--aagttgtttatctaaa 30926413  T
Q  130 caggccct 137  Q
    ||||||||    
T  30926412 caggccct 30926405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 8147699 - 8147568
Alignment:
Q  5 atatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataa 104  Q
    ||||||| |||| | | |||||| ||||||| ||||||||||||||||||||||| ||||||| | |||| |||| ||||||||||  ||   ||  |||    
T  8147699 atatacaaaaacaattcaactttattttatcttttgctataaaaatagcttatgt-agcttatgcttaagcgcttatcatgataagcgctaaggc--taa 8147603  T
Q  105 gctgcaaataagttgtttatccaaacaggccctta 139  Q
    |||||||||| ||||||||||||||||||||||||    
T  8147602 gctgcaaatatgttgtttatccaaacaggccctta 8147568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 18076178 - 18076083
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataa 115  Q
    ||||| || |||| || ||||||||||||||| |||||| |||||||||||||||||||| | ||||||||  ||||||| |||||||||||||||    
T  18076178 ttaaccttattttctcttttgctataaaaataacttatgcaagcttatacataagtgcttattatgataagcgcttgtgctataagctgcaaataa 18076083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 132
Target Start/End: Original strand, 26550304 - 26550404
Alignment:
Q  33 atcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctg-caaataagttgtttatccaaaca 131  Q
    |||||||| |||| | ||||||||||||||||||||||||||||||| |||| | |||   |||||| ||||||||  ||||| ||||||||||||||||    
T  26550304 atcatttgttatagagatagcttatgtaagcttatacataagtgcttatcattagaagttattgtgctataagctgtaaaatatgttgtttatccaaaca 26550403  T
Q  132 g 132  Q
    |    
T  26550404 g 26550404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 35070727 - 35070833
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttata-cataagtgcttgtcatgataagaacttgtgcaataagctgcaaat-aagttgtttatcc 126  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||| ||||||| |||||| |||  ||||||| ||||| ||||||| |||| | |||| |    
T  35070727 ttttatctttttctataaaaatagcttatgtaagcttatagcattagtgcttatcatgacaagtgcttgtgctataaggtgcaaatgaagtagattatgc 35070826  T
Q  127 aaacagg 133  Q
    |||||||    
T  35070827 aaacagg 35070833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 264322 - 264244
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    |||||||| |||||  ||| |||||||||| |||||||| ||||||||||||| || |||| ||||||||||| |||||    
T  264322 agcttatatataagcacttatcatgataagcacttgtgctataagctgcaaattagctgttaatccaaacagggcctta 264244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 30536475 - 30536406
Alignment:
Q  5 atatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    ||||||| |||| | ||||| || |||||||||||||||||| ||||||||||| || ||||||||||||    
T  30536475 atatacaaaaacaatttaacattattttatcatttgctataataatagcttatgcaaacttatacataag 30536406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 35069503 - 35069431
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||| ||||||  ||| |||||||||   ||||||| ||||||||||||||||||||||||| |||||||    
T  35069503 agcttatgcataagcacttatcatgataaacgcttgtgctataagctgcaaataagttgtttatcaaaacagg 35069431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 10645465 - 10645516
Alignment:
Q  78 ttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    |||| |||||||| | |||||| |||||||||||||||||||||||||||||    
T  10645465 ttgtaatgataagcatttgtgctataagctgcaaataagttgtttatccaaa 10645516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 30536657 - 30536700
Alignment:
Q  31 ttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    ||||| |||||||||||||||||||||| |||||||||||||||    
T  30536657 ttatcttttgctataaaaatagcttatgcaagcttatacataag 30536700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 6909941 - 6910031
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttat-catttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataag 90  Q
    ||||||||||| |||| | |||||||| |||| | | ||| ||||| |||||||||||||||| |||||||||||  ||| ||||||||||    
T  6909941 tagcatatacaaaaacaatttaactttatttttttcttttcctatagaaatagcttatgtaagtttatacataagcacttatcatgataag 6910031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 9632847 - 9632785
Alignment:
Q  66 atacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    ||||| ||||| || | |||||||| | |||||| ||||||||||||||||||||||||||||    
T  9632847 atacacaagtgtttattatgataagcatttgtgctataagctgcaaataagttgtttatccaa 9632785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 14929653 - 14929604
Alignment:
Q  83 atgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 132  Q
    |||||||| |||||||| ||||||||||||| |||||||| |||||||||    
T  14929653 atgataagcacttgtgctataagctgcaaatgagttgtttgtccaaacag 14929604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 33943251 - 33943147
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    ||||||||  ||||||||||||| | |||||||||||| |  |||| ||| |||| |||| |||||||||| | ||| |  ||||||| |||||||||||    
T  33943251 ttaactttaatttatcatttgctcttaaaatagcttatatt-gcttttacttaagcgcttatcatgataagtatttgcggtataagctacaaataagttg 33943153  T
Q  120 tttatc 125  Q
    ||||||    
T  33943152 tttatc 33943147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 19411592 - 19411688
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccct 137  Q
    |||||||| || ||||||||| |||||||||||| |||| | |||| |||   |||||| ||||||| |||||||| |  |||||||||||| ||||    
T  19411592 ctataaaactaccttatgtaaccttatacataagagcttattatgagaagtttttgtgctataagctccaaataagctacttatccaaacagaccct 19411688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 9763437 - 9763390
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtg 76  Q
    ||||||| |||| |||||||||| ||||||||| ||||||||||||||    
T  9763437 ttttatcttttgttataaaaatatcttatgtaaacttatacataagtg 9763390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 14164085 - 14164050
Alignment:
Q  39 tgctataaaaatagcttatgtaagcttatacataag 74  Q
    ||||||||||||| ||||||||||||||||||||||    
T  14164085 tgctataaaaatatcttatgtaagcttatacataag 14164050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 29754176 - 29754279
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    ||||||| |||| ||  ||||||||||||| ||||| ||||||||| |||| ||||||||||  ||||||| || | ||| ||  |||| |||| |||||    
T  29754176 ttttatcttttgttactaaaatagcttatgcaagctaatacataagcgcttatcatgataagcgcttgtgctatcacctgaaacaaagtggtttttccaa 29754275  T
Q  129 acag 132  Q
    ||||    
T  29754276 acag 29754279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 32014162 - 32014233
Alignment:
Q  45 aaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataag 116  Q
    |||||||||||||| ||||||| ||| || ||||| |  ||||||| |||||||| | ||||||||||||||    
T  32014162 aaaaatagcttatgcaagcttacacacaaatgcttatattgataagcacttgtgctagaagctgcaaataag 32014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 18690476 - 18690422
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    |||| ||| ||||||| |||||||||||| || ||||||||| ||||||||||||    
T  18690476 ttaaatttattttatcctttgctataaaagtaccttatgtaaccttatacataag 18690422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 848008 - 847931
Alignment:
Q  62 gcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    ||||||||||||| |||| | |||||||   |||||   |||||||||||| |||||||||||||||| ||| |||||    
T  848008 gcttatacataagcgcttattatgataactgcttgtcttataagctgcaaaaaagttgtttatccaaagagggcctta 847931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 23063650 - 23063719
Alignment:
Q  64 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||||||  |||| |||||||||  | |||||| ||||| ||||||||||||| | |||||||||||    
T  23063650 ttatacataaacgcttatcatgataatcatttgtgctataagatgcaaataagttgataatccaaacagg 23063719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 31623533 - 31623488
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    ||||||| ||| |||||||||||||| |||||||||||| ||||||    
T  31623533 ttttatctttttctataaaaatagctaatgtaagcttatgcataag 31623488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 658584 - 658636
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||| |||||||| ||||| || |||||| | |||||||||||||||    
T  658584 tcatgataagtacttgtgctataagttgaaaataaatagtttatccaaacagg 658636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 41407283 - 41407170
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    |||||||| ||||||| |||| || | ||||||||||||||||||||||||||||||||| ||||||||||  ||||||| |||||||||||| ||| ||    
T  41407283 ttaactttattttatcttttggtacagaaatagcttatgtaagcttatacataagtgcttatcatgataagcgcttgtgctataagctgcaaacaagctg 41407184  T
Q  120 tttatccaaacagg 133  Q
    ||||||||||||||    
T  41407183 tttatccaaacagg 41407170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 42659220 - 42659359
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| |||| | || ||||| ||||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||    |||||     
T  42659220 tagcatatacaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatgataagtgtgtgtgct 42659319  T
Q  101 ataagctgcaaataagttgtttatccaaacaggcccttaa 140  Q
    || |||||||||||||||  ||||||||||||||||||||    
T  42659320 attagctgcaaataagtttcttatccaaacaggcccttaa 42659359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 1633656 - 1633750
Alignment:
Q  42 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 136  Q
    |||||||| ||| |||||||||| | |||||||  ||| |||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||    
T  1633656 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 1633750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 32592569 - 32592463
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    ||||| || ||||||| ||| |||||||||||| ||||| ||||||||||||||| |||| | ||||||||   |||||| ||||||| |||||||||||    
T  32592569 ttaacattattttatctttttctataaaaatagtttatgcaagcttatacataagcgcttataatgataagtgtttgtgctataagctacaaataagttg 32592470  T
Q  120 tttatcc 126  Q
    |||||||    
T  32592469 tttatcc 32592463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 15305639 - 15305518
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatg-ataagaacttgtgcaataagctgcaaataagtt 118  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||| |||  |||  |||| ||||   ||| ||| | ||| |||||||||| |    
T  15305639 ttaacattattttatcatttgctataaaaatagcttatgcaagcttatacacaagcacttaccatgtataaacgcttatgctaaaagttgcaaataagct 15305540  T
Q  119 gtttatccaaacaggcccttaa 140  Q
    ||||||||||||||||||||||    
T  15305539 gtttatccaaacaggcccttaa 15305518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 12795753 - 12795654
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcccttaa 140  Q
    |||| ||||||||||||||||||||||  | |||||||| |||||||||| |||| ||| |||| ||||||||||  ||||||||||||| ||| |||||    
T  12795753 ctatcaaaatagcttatgtaagcttatgaaaaagtgcttatcatgataagcacttatgctataaactgcaaataaactgtttatccaaactggctcttaa 12795654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 3312024 - 3311922
Alignment:
Q  22 aactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtt 121  Q
    |||||| |||||||  ||||| |||||| |||||||||| |||||||||||||  ||| |||||||||  |||||||| |||||||| |||||| |||||    
T  3312024 aactttattttatcccttgctgtaaaaacagcttatgtatgcttatacataagcacttttcatgataatcacttgtgctataagctgaaaataatttgtt 3311925  T
Q  122 tat 124  Q
    |||    
T  3311924 tat 3311922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 39659639 - 39659709
Alignment:
Q  63 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||| |||| |||||||||| | ||||||  ||||||||||||||||||||||||||||||||    
T  39659639 cttatacataagcgcttatcatgataagcatttgtgctctaagctgcaaataagttgtttatccaaacagg 39659709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 2416262 - 2416194
Alignment:
Q  63 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    ||||||||||||  |||  |||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  2416262 cttatacataagcacttaacatgataagaacttgtgctataagctgaaaataagttgtttatccaaaca 2416194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 11863886 - 11863794
Alignment:
Q  47 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    ||||||||||||||||||||| |||||| |||| |||||| |||   ||||||  ||||||| |||||||||||||||||| ||||| |||||    
T  11863886 aaatagcttatgtaagcttatgcataagcgcttatcatgacaagtgtttgtgctgtaagctgaaaataagttgtttatccagacaggtcctta 11863794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 15757747 - 15757869
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagt-------gcttgtcatgataagaacttgtgcaataagctgcaaa 112  Q
    |||||||| ||||||||||| || || | ||||||||||| ||||||||||||||        |||| ||||||||||  ||||||| |||||||| |||    
T  15757747 ttaactttattttatcattttctttagatatagcttatgtgagcttatacataagcttttatcgcttatcatgataagcgcttgtgctataagctgaaaa 15757846  T
Q  113 taagttgtttatccaaacaggcc 135  Q
    |||| ||||||||||||||||||    
T  15757847 taagctgtttatccaaacaggcc 15757869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 41241201 - 41241305
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| |||| | |||||||  ||||||| ||| ||||| ||||||||||||||||||||| |||||| || | ||||||||||  |||||||     
T  41241201 tagcatatacaaaaacaatttaacttcattttatcttttcctatagaaatagcttatgtaagcttatccataagcgcatatcatgataagtgcttgtgct 41241300  T
Q  101 ataag 105  Q
    |||||    
T  41241301 ataag 41241305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41812159 - 41812231
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataa 73  Q
    ||||||||||| |||| | |||||||  ||||| ||||||| |||||||||||||||||||||||||||||||    
T  41812159 tagcatatacaaaaacaatttaacttcattttaccatttgccataaaaatagcttatgtaagcttatacataa 41812231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 41851536 - 41851408
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| |||| | |||||||| || |||| ||| ||||| ||||| ||  |||||||||||| ||||| | ||  |||||||||  |||||||     
T  41851536 tagcatatacaaaaacaatttaactttattgtatcttttcctatataaatatctcgtgtaagcttatatataagcgtttagcatgataagcgcttgtgct 41851437  T
Q  101 ataagctgcaaataagttgtttatccaaa 129  Q
    ||| |||||||||||| ||||||||||||    
T  41851436 atatgctgcaaataagatgtttatccaaa 41851408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 12464542 - 12464673
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| |||| | |||||||| ||||||| ||| ||| | ||||||||||||||||||| |||||| |  ||| ||||||||||  | || |      
T  12464542 tagcatatacaaaaacaatttaactttattttatctttttctacagaaatagcttatgtaagcttctacatatgcacttatcatgataagtgcgtgcgtt 12464641  T
Q  101 ataagctgcaaataagttgtttatccaaacag 132  Q
    ||||||| ||||||||  ||||||||||||||    
T  12464642 ataagctacaaataagccgtttatccaaacag 12464673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 33319912 - 33320025
Alignment:
Q  31 ttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagc-------tgcaaataagttgttta 123  Q
    ||||||||| |||||||||||| |||||||| ||| |||||||| | || ||| ||||||  ||||||| ||||||       |||||||||||||||||    
T  33319912 ttatcatttactataaaaatagtttatgtaaacttttacataagcgattatcaggataagcgcttgtgctataagctgcaaattgcaaataagttgttta 33320011  T
Q  124 tccaaacaggccct 137  Q
    ||||||||||||||    
T  33320012 tccaaacaggccct 33320025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 135
Target Start/End: Original strand, 23974599 - 23974693
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcc 135  Q
    |||||||||||||||| |||||||||| ||||||||||| || || | |  |||||||  ||||||| |||||||| || |||||||||||||||    
T  23974599 ctataaaaatagcttaagtaagcttatgcataagtgcttatcttgcttatcacttgtgatataagctccaaataagctgcttatccaaacaggcc 23974693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 13325552 - 13325447
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    |||||||| ||||||||||| |||||||| |||||||||| | || ||||||||||||||  ||||| |||  ||| ||  ||||||| ||||||| |||    
T  13325552 ttaactttattttatcattttctataaaactagcttatgttacctcatacataagtgcttaacatgagaagtgcttttgatataagctccaaataaattg 13325453  T
Q  120 tttatc 125  Q
    ||||||    
T  13325452 tttatc 13325447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 26626824 - 26626759
Alignment:
Q  64 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    ||||||||||||  || ||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  26626824 ttatacataagtatttatcatgataagagcttatgctataagctgcaaataagttgtttatccaaa 26626759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 41293346 - 41293434
Alignment:
Q  47 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc--aaataagttgtttatccaaacagg 133  Q
    ||||| |||||||||||||| ||||| | ||||  ||||||| | |||||||| |||||||||  ||||||||||||||||||||||||    
T  41293346 aaataacttatgtaagcttacacatacgcgcttaccatgatacgcacttgtgctataagctgcaaaaataagttgtttatccaaacagg 41293434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 26201993 - 26201925
Alignment:
Q  37 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataag 105  Q
    |||||||||||||||||||||| ||||||||| ||||| |||| ||||||||||  ||||||| |||||    
T  26201993 tttgctataaaaatagcttatgcaagcttatatataagggcttatcatgataagcgcttgtgctataag 26201925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 42868534 - 42868634
Alignment:
Q  5 atatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataa 104  Q
    ||||||| |||| | |||||||| ||||||| ||| |||| |||||||||||||||| ||||| |||||| || | ||||||||||  ||||||| ||||    
T  42868534 atatacaaaaacaatttaactttattttatctttttctatgaaaatagcttatgtaaacttatgcataagcgcctatcatgataagcgcttgtgctataa 42868633  T
Q  105 g 105  Q
    |    
T  42868634 g 42868634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 38010394 - 38010283
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    ||||| || ||||||| |||  |||| ||| | |||| ||||||||| || |||| || | |||||||||| |||||||  |||||||||||||||||||    
T  38010394 ttaacattattttatcttttaatatagaaacaacttacgtaagcttagacgtaagggcatatcatgataagcacttgtgatataagctgcaaataagttg 38010295  T
Q  120 tttatccaaaca 131  Q
    |||||| |||||    
T  38010294 tttatctaaaca 38010283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 5599164 - 5599243
Alignment:
Q  42 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 125  Q
    |||||||||||||||||    |||||| |||||||||| | |||||||| |||| ||| |||||||||||||||||| ||||||    
T  5599164 tataaaaatagcttatg----cttataaataagtgcttattatgataagcacttatgctataagctgcaaataagttttttatc 5599243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 38916378 - 38916514
Alignment:
Q  4 catatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgc---a 100  Q
    |||||||| |||| | |||||||| ||||||| || | ||||  || | ||||| ||| ||||||||||||||||| | |||||||| ||||||||   |    
T  38916378 catatacaaaaacaatttaactttattttatctttagttataggaaaaacttatataaacttatacataagtgcttattatgataagtacttgtgcttta 38916477  T
Q  101 a----taagctgcaaataagttgtttatccaaacagg 133  Q
    |    |||||||||||||||||||| |||||||||||    
T  38916478 aggtttaagctgcaaataagttgttcatccaaacagg 38916514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 41812234 - 41812279
Alignment:
Q  92 acttgtgcaataagctgcaaataagttgtttatccaaacaggccct 137  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||    
T  41812234 acttgtgctataaactgcaaataagttgtttatccaaacaggccct 41812279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 19608744 - 19608816
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||||||||||||||| ||||| || |  ||||||| |||||||||||||| | ||| ||||||||||||    
T  19608744 agcttatacataagtgcttatcatggtatgtgcttgtgctataagctgcaaatatgctgtatatccaaacagg 19608816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 28792329 - 28792401
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||||||| |||| |||||| |  ||||||| ||||||||||| |||| | ||||||||||||||    
T  28792329 agcttatacataagtgattgtaatgataggtgcttgtgctataagctgcaagtaagctttttatccaaacagg 28792401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 31561841 - 31561929
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctg 108  Q
    |||||||| |||||||||||  |||| | ||||||||||||||||||||  |||| |||| |||||||||   ||||||| ||||||||    
T  31561841 ttaactttattttatcatttattatagatatagcttatgtaagcttatatgtaagcgcttatcatgataaacgcttgtgctataagctg 31561929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 4606911 - 4606860
Alignment:
Q  82 catgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||||| |||||||  ||||||||| |||||||||||||||||||||||    
T  4606911 catgataagcacttgtgttataagctgcgaataagttgtttatccaaacagg 4606860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 45229510 - 45229440
Alignment:
Q  4 catatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    |||||||| |||| | ||||| |  ||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  45229510 catatacaaaaacaatttaacctcattttatcgtttgctatagaaatagcttatgtaaacttatacataag 45229440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 7043881 - 7043913
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||||||||||||||||||||||||    
T  7043881 ataagctgcaaataagttgtttatccaaacagg 7043913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 9395079 - 9395011
Alignment:
Q  63 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    ||||||||| |||| || ||||||||||| ||||||| |||||| ||||||||| | | ||||||||||    
T  9395079 cttatacatgagtgtttatcatgataagagcttgtgctataagccgcaaataagctatgtatccaaaca 9395011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 26143760 - 26143831
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||| |||||||  ||||| ||||  ||||||  |||| ||||||||||||||||||||||||||||    
T  26143760 agcttatacacaagtgcta-tcatggtaagtgcttgtgttataaactgcaaataagttgtttatccaaacagg 26143831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 40682492 - 40682564
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||||| ||||  |||||||||  |||| || || || |||||||||| ||||||||||||||||    
T  40682492 agcttatacataagcgcttaccatgataagcgcttgcgctatgagttgcaaataagatgtttatccaaacagg 40682564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 40835471 - 40835435
Alignment:
Q  95 tgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    ||||| |||||||||||||||||||||||||||||||    
T  40835471 tgtgctataagctgcaaataagttgtttatccaaaca 40835435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 41880642 - 41880694
Alignment:
Q  82 catgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaacagg 133  Q
    |||||||||  ||||||| |||||||||||| |||||||||||||||||||||    
T  41880642 catgataagcgcttgtgctataagctgcaaagtaagttgtttatccaaacagg 41880694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 9174725 - 9174694
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacag 132  Q
    ||||||||||||||||||||||||||||||||    
T  9174725 ataagctgcaaataagttgtttatccaaacag 9174694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 31744325 - 31744237
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||| |||||| |||| | ||||||||||||||| |||| ||||  ||||  ||||||| ||||||| |||||||| |||||| |||||||    
T  31744325 ctatgaaaataacttacgcaagcttatacataagcgcttatcat--taagtgcttgtgctataagctacaaataagctgtttaaccaaaca 31744237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 40279121 - 40279082
Alignment:
Q  92 acttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  40279121 acttgtgctataagctacaaataagttgtttatccaaaca 40279082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 43570352 - 43570297
Alignment:
Q  76 gcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||| ||||||||||  ||||||| |||||||||||||||| |||||| |||||||    
T  43570352 gcttatcatgataagtgcttgtgctataagctgcaaataagctgtttacccaaaca 43570297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 27695730 - 27695784
Alignment:
Q  75 tgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    ||||| ||||||||||   |||||| ||||||| |||||||||||||||||||||    
T  27695730 tgcttatcatgataagtgtttgtgctataagctacaaataagttgtttatccaaa 27695784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 135
Target Start/End: Complemental strand, 43036541 - 43036507
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacaggcc 135  Q
    |||||| ||||||||||||||||||||||||||||    
T  43036541 ataagcggcaaataagttgtttatccaaacaggcc 43036507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 4026799 - 4026762
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttat 57  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  4026799 ttaactttattttatcttttgctataaaaatagcttat 4026762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 12038024 - 12037971
Alignment:
Q  48 aatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaa 101  Q
    ||||||||||| ||| |||||||||||||||| |||| ||||| |||| |||||    
T  12038024 aatagcttatggaagattatacataagtgcttatcattataagcacttctgcaa 12037971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 22971606 - 22971674
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataa 89  Q
    |||||||| ||||||| ||| ||||| ||||||||||| |||||||||||| ||| |||| |||| ||||    
T  22971606 ttaactttattttatctttt-ctatagaaatagcttatataagcttatacacaagcgcttatcataataa 22971674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 28330414 - 28330502
Alignment:
Q  47 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 136  Q
    ||||||||||   |||||||| |||| | |||| ||||||||||  ||||||| ||||| |  ||| |||||||||||||||||||||||    
T  28330414 aaatagcttacacaagcttatgcatatgcgcttatcatgataagtgcttgtgctataagtttaaaa-aagttgtttatccaaacaggccc 28330502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 39567852 - 39567775
Alignment:
Q  63 cttatacataagtgcttgtcatgataagaacttgtgcaataagctg-caaataagttgtttatccaaacaggccctta 139  Q
    |||||||| |||||||| ||||||||||  ||| ||||||||||||  || |||| ||||||||||||| || |||||    
T  39567852 cttatacacaagtgcttatcatgataagcgcttatgcaataagctgtgaattaagctgtttatccaaaccgggcctta 39567775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 42420366 - 42420419
Alignment:
Q  4 catatacataaacgacttaactttgttttatcatttgctataaaaatagcttat 57  Q
    |||||||| |||| | ||||| || ||||||| |||||||||||||||||||||    
T  42420366 catatacaaaaacaatttaacgttattttatcttttgctataaaaatagcttat 42420419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 42457896 - 42457827
Alignment:
Q  64 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||| ||||| |||||||| |  ||||||| ||||||  ||||||||| ||| |||||||||||    
T  42457896 ttatacataaatgcttatcatgataggcgcttgtgctataagccacaaataagtggttaatccaaacagg 42457827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 10258656 - 10258592
Alignment:
Q  22 aactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatga 86  Q
    |||||| ||||||||||| | | |||| || ||||||||| ||||||||||||  ||||||||||    
T  10258656 aactttattttatcatttcccacaaaactaccttatgtaaccttatacataagcacttgtcatga 10258592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 10619303 - 10619343
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgta 60  Q
    |||||||||||||||| ||| |||||||||||||| |||||    
T  10619303 ttaactttgttttatctttttctataaaaatagctaatgta 10619343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 12194869 - 12194821
Alignment:
Q  85 gataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||| |||||||| |||||||  |||||||||||||| |||||||||    
T  12194869 gataagcacttgtgctataagctataaataagttgtttaaccaaacagg 12194821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 21827983 - 21827947
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacaggccct 137  Q
    ||||||||||||||||||||||||  |||||||||||    
T  21827983 ataagctgcaaataagttgtttatataaacaggccct 21827947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 36534736 - 36534668
Alignment:
Q  64 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 132  Q
    ||||||| |||  ||| |||||||||| |||| ||  |||| ||| |||||||||||||||||||||||    
T  36534736 ttatacacaagcacttatcatgataagcacttatgttataaactgaaaataagttgtttatccaaacag 36534668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 41449819 - 41449791
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaa 129  Q
    |||||||||||||||||||||||||||||    
T  41449819 ataagctgcaaataagttgtttatccaaa 41449791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 6e-31; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 21568728 - 21568828
Alignment:
Q  32 tatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| ||| |||||||||||| ||| ||||||||||||||    
T  21568728 tatcttttgctataaaaatagcttatgcaagcttatacataagtgcttatcatgataagcacttatgctataagctgcaaacaagctgtttatccaaaca 21568827  T
Q  132 g 132  Q
    |    
T  21568828 g 21568828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 46078144 - 46078008
Alignment:
Q  5 atatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataa 104  Q
    ||||||| |||| | |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||| |||| |||||||| |   ||||||  |||    
T  46078144 atatacaaaaacaatttaactttgttttatctttttctataaaaataacttatgtaagcttatacataagcgcttatcatgatatgtgtttgtgctttaa 46078045  T
Q  105 gctgcaaataagttgtttatccaaacaggcccttaac 141  Q
    | |||| ||||| ||||| ||||||||||||||||||    
T  46078044 gttgcatataagctgtttgtccaaacaggcccttaac 46078008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 45264096 - 45263959
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaa--tagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtg 98  Q
    ||||||||||| |||| | |||||||| ||| ||| ||| |||||||||  |||||||||||||||||| | |||| |||| ||||||||||  ||||||    
T  45264096 tagcatatacaaaaacaatttaactttatttcatctttttctataaaaaaatagcttatgtaagcttatgcgtaagcgcttttcatgataagcgcttgtg 45263997  T
Q  99 caataagctgcaaataagttgtttatccaaacaggccc 136  Q
      |||||| |||||||||||||||||||||||||||||    
T  45263996 tgataagccgcaaataagttgtttatccaaacaggccc 45263959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 5947137 - 5947023
Alignment:
Q  22 aactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtt 121  Q
    ||||||||||||| ||||||||| ||||||| |||| ||||||||||||||||||| | |||||||||    |||||| ||||||| |||||||| | ||    
T  5947137 aactttgttttataatttgctattaaaatagtttatctaagcttatacataagtgcctatcatgataa----ttgtgctataagcttcaaataagctatt 5947042  T
Q  122 tatccaaacaggcccttaa 140  Q
    |||||||||||||||||||    
T  5947041 tatccaaacaggcccttaa 5947023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 4970885 - 4970996
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||  |||| ||||| || | |||| | | ||||||||||||||||  ||||||||||    
T  4970885 ttttatcttttgctatagaaatagcttatgtaagcttatacataaccgcttatcatggtagggactttttctataagctgcaaataagccgtttatccaa 4970984  T
Q  129 acaggcccttaa 140  Q
    | ||| ||||||    
T  4970985 agaggtccttaa 4970996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 9210589 - 9210493
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccct 137  Q
    |||||||| ||||||||| ||||||||||||||| | || |||||||||    ||| || |||||||||||||||| ||||||||||||||||||||    
T  9210589 ctataaaagtagcttatgcaagcttatacataagcgattatcatgataaatgtttgcgctataagctgcaaataagctgtttatccaaacaggccct 9210493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 33128739 - 33128623
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    |||||||| |||||||  || ||||||||||| | || |||||||||| ||||||  ||| ||||||||||   ||||||  ||||||||||||||| ||    
T  33128739 ttaactttattttatctctttctataaaaataacgtaagtaagcttatgcataagcacttatcatgataagtgtttgtgctgtaagctgcaaataagctg 33128640  T
Q  120 tttatccaaacaggccc 136  Q
    |||||||||||||||||    
T  33128639 tttatccaaacaggccc 33128623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 33552940 - 33553007
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    |||||||||||||| |||| ||||| ||||  ||||||||||||||||||||||||||||||||||||    
T  33552940 agcttatacataagcgcttatcatggtaagtgcttgtgcaataagctgcaaataagttgtttatccaa 33553007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 38500007 - 38500122
Alignment:
Q  21 taactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgt 120  Q
    ||||||| || |||||||| | | ||||||| ||| ||||| | |||||||||| |||| ||||||||||  ||||||| |||| ||||||||||| |||    
T  38500007 taactttattatatcatttccaacaaaaataacttctgtaatcatatacataagcgcttatcatgataagcgcttgtgctataaactgcaaataagctgt 38500106  T
Q  121 ttatccaaacaggccc 136  Q
    ||||| ||||||||||    
T  38500107 ttatctaaacaggccc 38500122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 27863846 - 27863903
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctt 138  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||    
T  27863846 tcatgataagcacttgtgctataagctacaaataagttgtttatccaaacaggccctt 27863903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 23989581 - 23989685
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    ||||||| ||| |||||||||||| ||||| || ||||||||||||  ||| ||||||||||  | ||| | |||||||||||||||||||||  |||||    
T  23989581 ttttatcttttactataaaaatagtttatgcaaacttatacataagaacttatcatgataagcgcgtgtactataagctgcaaataagttgttactccaa 23989680  T
Q  129 acagg 133  Q
    |||||    
T  23989681 acagg 23989685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 45806565 - 45806657
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa 112  Q
    ||||| || |||| || ||||||||||| |||||||||| |||||||||||||||||||| | ||||||||  ||| ||| ||||||||||||    
T  45806565 ttaacgttattttctcttttgctataaacatagcttatgcaagcttatacataagtgcttattatgataagtgcttttgctataagctgcaaa 45806657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 40252179 - 40252301
Alignment:
Q  4 catatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaata 103  Q
    |||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||  |            || |||| |||||||| ||||| |||    
T  40252179 catatacaaaaacgatttaactttgttttatcatttgcaataaaactagcttatgtaagtgt-----------tttatcataataagaacatgtgctata 40252267  T
Q  104 agctgcaaataagttgtttatccaaacaggccct 137  Q
    ||||||| ||||| ||||||||||||||||||||    
T  40252268 agctgcatataaggtgtttatccaaacaggccct 40252301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 18865120 - 18865249
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    |||||||||||||| | |||||| |||   ||||| ||||||||   |||| ||||||||| |||||| ||||   ||| ||||||||||   ||||||     
T  18865120 tagcatatacataa-caacttaattttacattatcttttgctatcttaataacttatgtaaacttataaataaacacttatcatgataagcgtttgtgct 18865218  T
Q  101 ataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||||||||||||||||||||||||||    
T  18865219 ataagctgcaaataagttgtttatccaaaca 18865249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 3308372 - 3308457
Alignment:
Q  52 gcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccct 137  Q
    |||||||||| ||||||||||||  ||| |||||| ||| |||||||| ||||||| |||||||| |||||||| |||||| ||||    
T  3308372 gcttatgtaaccttatacataagcacttatcatgaaaagtacttgtgctataagctccaaataagctgtttatctaaacagaccct 3308457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 33266572 - 33266633
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 81  Q
    |||||||| ||||||| ||||||||| ||||||||| ||| |||||||||||||||||||||    
T  33266572 ttaactttattttatcctttgctatataaatagcttttgtgagcttatacataagtgcttgt 33266633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 33673029 - 33672957
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||||| |||| |||| ||||  |||||||| ||||||||||||||| | |||||||||||||||    
T  33673029 agcttatacataagcgcttatcataataaatacttgtgctataagctgcaaataaatagtttatccaaacagg 33672957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 119911 - 119775
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataa--gaacttgtg 98  Q
    |||||| |||| |||| | |||||||| ||||||| ||| || || |||||||||||||||| |||| ||| |||| ||||||||||||  |    ||||    
T  119911 tagcatttacacaaacaatttaactttattttatcttttcctgtagaaatagcttatgtaaggttatgcat-agtgtttgtcatgataagtgtgtgtgtg 119813  T
Q  99 caataagctgcaaataagttgtttatccaaacaggccc 136  Q
    | |||||||||| ||||| | |||||||||||||||||    
T  119812 ctataagctgcagataagctttttatccaaacaggccc 119775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 46280374 - 46280460
Alignment:
Q  47 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||| |||||||||||||| ||| ||||||| |||||||||   ||||||| |||||||  ||||||  ||||||||||||||||    
T  46280374 aaatagattatgtaagcttatgcatgagtgcttatcatgataaacgcttgtgctataagctataaataaactgtttatccaaacagg 46280460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 420361 - 420289
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataa 73  Q
    ||||||||||| |||| | | ||| || ||||||| ||||||||||| |||||||||| ||||||||||||||    
T  420361 tagcatatacaaaaacaattgaacattattttatcttttgctataaacatagcttatgcaagcttatacataa 420289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 11619347 - 11619386
Alignment:
Q  93 cttgtgcaataagctgcaaataagttgtttatccaaacag 132  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  11619347 cttgtgcaataatctgcaaataagttgtttatccaaacag 11619386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 30571000 - 30571128
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| |||  | |||||||| ||||| | || |||||| || ||||||||||||||||||||||| |  ||| ||||| ||        |||     
T  30571000 tagcatatacaaaaataatttaactttattttacctttcgctatataagtagcttatgtaagcttatacatatgcacttatcatgcta--------tgct 30571091  T
Q  101 ataagctgcaaataagttgtttatccaaacaggccct 137  Q
    |||||||||||||||| |||||||||||||| |||||    
T  30571092 ataagctgcaaataagctgtttatccaaacacgccct 30571128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 34464285 - 34464415
Alignment:
Q  4 catatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaata 103  Q
    |||||||| |||| | ||||||||  |||||| |||  |||||||||| ||| ||||||| |||  |||||||||| ||||||||||   || ||| |||    
T  34464285 catatacaaaaacaaattaactttaatttatctttttttataaaaataacttgtgtaagcatatg-ataagtgcttatcatgataagggtttatgctata 34464383  T
Q  104 agctgcaaataagttgtttatccaaacaggcc 135  Q
     |||||||| | |||||||||||||| |||||    
T  34464384 ggctgcaaacatgttgtttatccaaaaaggcc 34464415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 40377997 - 40378032
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacaggccc 136  Q
    ||||||||||||||||||||||||||||||||||||    
T  40377997 ataagctgcaaataagttgtttatccaaacaggccc 40378032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 45004748 - 45004633
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    |||||||| ||||||| |||||||||||||||| ||||| |||| ||||   |   | || |||| ||||   ||||||| |||| |||||||||||||     
T  45004748 ttaactttattttatcttttgctataaaaatagtttatgcaagcatataggcacacgtttatcataataattgcttgtgctataaactgcaaataagtta 45004649  T
Q  120 tttatccaaacaggcc 135  Q
    ||||||||||||||||    
T  45004648 tttatccaaacaggcc 45004633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 47795905 - 47795838
Alignment:
Q  64 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    ||||||||||||| || ||||||||||  ||| ||| |||||||||||||||| |||||||| |||||    
T  47795905 ttatacataagtggttatcatgataagcgcttatgctataagctgcaaataagctgtttatctaaaca 47795838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 28900870 - 28900760
Alignment:
Q  20 ttaactttgttttatcatttgcta-taaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 118  Q
    |||||||| |||||||||||| || ||||||||   |||||  | ||| ||||||| |||| |||| ||||   ||||||  ||||||||||||||||||    
T  28900870 ttaactttattttatcatttgataataaaaataatatatgtccgattagacataagcgcttatcataataaatgcttgtgttataagctgcaaataagtt 28900771  T
Q  119 gtttatccaaa 129  Q
    |||||||||||    
T  28900770 gtttatccaaa 28900760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 39393695 - 39393772
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    |||||||| ||||| |||| ||||||| | | ||||||| |||||||||||||||| |||| ||||||||||| |||||    
T  39393695 agcttata-ataagcgcttatcatgatcaaagcttgtgctataagctgcaaataagctgttcatccaaacagggcctta 39393772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 48140189 - 48140139
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgctt 79  Q
    ||||||| |||| ||||||||||||||||| ||||||||||||||| ||||    
T  48140189 ttttatcttttgttataaaaatagcttatgcaagcttatacataagcgctt 48140139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 31247666 - 31247707
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttataca 70  Q
    ||||||| |||||||||||||||||||||| |||||||||||    
T  31247666 ttttatcttttgctataaaaatagcttatgcaagcttataca 31247707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 133
Target Start/End: Complemental strand, 28210356 - 28210324
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||||||||||||||||||||||||    
T  28210356 ataagctgcaaataagttgtttatccaaacagg 28210324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 45806414 - 45806462
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttata 68  Q
    ||||| || ||||||| |||||||||||||||||||||| |||||||||    
T  45806414 ttaacgttattttatcttttgctataaaaatagcttatgcaagcttata 45806462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 46139873 - 46139821
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||||||  ||||||  ||||||||||||||||||||||| |||||||||    
T  46139873 tcatgataagtgcttgtgttataagctgcaaataagttgtttaaccaaacagg 46139821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 7612410 - 7612331
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaacaggccctta 139  Q
    |||||||||||| | |||| ||||||||||  ||| ||| |||||||||||| ||||||||||||  ||||||| |||||    
T  7612410 agcttatacatatgagcttatcatgataagtgcttatgctataagctgcaaattaagttgtttattgaaacaggacctta 7612331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 17248485 - 17248434
Alignment:
Q  74 gtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 125  Q
    |||||| ||||||||||||||||||| ||||| || ||||||| ||||||||    
T  17248485 gtgcttatcatgataagaacttgtgctataagttgtaaataaggtgtttatc 17248434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 17983715 - 17983750
Alignment:
Q  46 aaaatagcttatgtaagcttatacataagtgcttgt 81  Q
    ||||||||||||||||||||||||||||| ||||||    
T  17983715 aaaatagcttatgtaagcttatacataagcgcttgt 17983750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 20526428 - 20526369
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgctt 79  Q
    |||||||| ||||||| ||||||||| || |||| || ||||| ||||||||||||||||    
T  20526428 ttaactttattttatcttttgctatataagtagcataggtaagtttatacataagtgctt 20526369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 21619358 - 21619295
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttat 124  Q
    |||||| | |||||||||| ||||||||||  ||||||| ||||||||||||| || |||||||    
T  21619358 agcttagagataagtgcttatcatgataagtgcttgtgctataagctgcaaattagatgtttat 21619295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 28613608 - 28613659
Alignment:
Q  6 tatacataaacgacttaactttgttttatcatttgctataaaaatagcttat 57  Q
    |||||| |||| | |||||||||||||||| |||| ||||||||||||||||    
T  28613608 tatacaaaaacaatttaactttgttttatcttttgttataaaaatagcttat 28613659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 38138588 - 38138679
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 132  Q
    |||||||||||||||||  || |||||||||||   ||| |||||| |||   |||||| |||||  ||||||||| |||||||||||||||    
T  38138588 ctataaaaatagcttatccaaccttatacataaactcttatcatgacaagtgattgtgctataagacgcaaataagctgtttatccaaacag 38138679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 40196350 - 40196243
Alignment:
Q  26 ttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 125  Q
    |||| ||||| ||||||| |||||||  ||||| |||||||||  |||| |||| ||||||||||  | |||||  ||| || |||||||||||||||||    
T  40196350 ttgtattatcttttgcta-aaaaatacattatgcaagcttata--taagcgcttatcatgataagcgcatgtgctgtaaactacaaataagttgtttatc 40196254  T
Q  126 caaacaggccc 136  Q
    |||||| ||||    
T  40196253 caaacaagccc 40196243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 20428447 - 20428353
Alignment:
Q  22 aactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataag 116  Q
    |||||| ||||||||||| | ||||||  | ||||||||| |||||||||||| |||| |||||| |||   |||||| ||||||| ||| ||||    
T  20428447 aactttattttatcatttccaataaaaccaccttatgtaaccttatacataagcgcttatcatgagaagtgtttgtgctataagctccaactaag 20428353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 20881755 - 20881825
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||| ||||||||| |||| ||||||||||  ||||||| |||| || ||||||||||||| ||| |||||    
T  20881755 agctcatacataagagcttatcatgataagtgcttgtgctataaactacaaataagttgttcatctaaaca 20881825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 22296366 - 22296404
Alignment:
Q  93 cttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  22296366 cttgtgctataagctgcaaataagttgtttatctaaaca 22296404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 39279960 - 39279891
Alignment:
Q  4 catatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    |||||||| |||| | |||||||  ||||||| ||||| ||| |||||||| |||||||||||||||||||    
T  39279960 catatacacaaacaatttaacttaattttatcttttgcaatagaaatagct-atgtaagcttatacataag 39279891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 39279745 - 39279704
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaa 61  Q
    |||||||||||||||| ||||||||| ||| |||||||||||    
T  39279745 ttaactttgttttatcttttgctatagaaacagcttatgtaa 39279704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 45593444 - 45593411
Alignment:
Q  106 ctgcaaataagttgtttatccaaacaggccctta 139  Q
    |||||||||||||||||||||||||||| |||||    
T  45593444 ctgcaaataagttgtttatccaaacagggcctta 45593411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 7512313 - 7512345
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||| ||||||||||||||||||||||||    
T  7512313 ataagctgtaaataagttgtttatccaaacagg 7512345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 31247633 - 31247665
Alignment:
Q  37 tttgctataaaaatagcttatgtaagcttatac 69  Q
    |||||||||||||||||||||| ||||||||||    
T  31247633 tttgctataaaaatagcttatgcaagcttatac 31247665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 39967849 - 39967805
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatc 125  Q
    ||||||||||||||||||| || | || |||||||||||||||||    
T  39967849 tcatgataagaacttgtgctatgaacttcaaataagttgtttatc 39967805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 46407110 - 46407074
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacaggccct 137  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  46407110 ataagctacaaataagttgtttatcaaaacaggccct 46407074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 47177585 - 47177517
Alignment:
Q  63 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||| ||| |||| |||| |||||  ||| ||| |||| | ||||||||||||||||||||||||    
T  47177585 cttatacagaagggcttatcatcataagtgcttatgctataatcagcaaataagttgtttatccaaaca 47177517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 3735579 - 3735695
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    |||||||| ||| ||| ||||||||| ||||||||||||||||||||| |||||| |||| |||||||||   ||||||| |||||||||||||| ||||    
T  3735579 ttaactttatttcatcttttgctatagaaatagcttatgtaagcttatccataagcgcttatcatgataatctcttgtgctataagctgcaaataggttg 3735678  T
Q  120 tttatccaaacaggccc 136  Q
    |||||||||||||||||    
T  3735679 tttatccaaacaggccc 3735695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 32372625 - 32372489
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| |||| | | |||||| ||||||||  |||||||| ||||| |||||||||  |||||||||| |||| ||||||||||  |||||||     
T  32372625 tagcatatacaaaaacaattcaactttattttatcaggtgctataataatagtttatgtaagtgtatacataagggcttatcatgataagtgcttgtgct 32372526  T
Q  101 ataagctgcaaataagttgtttatccaaacaggccct 137  Q
    ||||||||||||||||||||||||||||||| |||||    
T  32372525 ataagctgcaaataagttgtttatccaaacatgccct 32372489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 12554445 - 12554334
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||| | ||| | ||| |||| |||||   ||||||  ||||||||||||||||||    
T  12554445 ttaactttattttatcatttactataaaaatagcttatggaagcttatgcgtaaatacttatcataataagcgtttgtgctttaagctgcaaataagttg 12554346  T
Q  120 tttatccaaaca 131  Q
    ||||||||||||    
T  12554345 tttatccaaaca 12554334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 7319126 - 7319209
Alignment:
Q  47 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 130  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||  ||||||| |||||||| ||||||| ||||||| |||||    
T  7319126 aaatagcttatgtaagcttatgcataagtgcttatcatgataagcgcttgtgctataagctgtaaataagctgtttattcaaac 7319209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 7706085 - 7706184
Alignment:
Q  41 ctataaaaatagcttatgtaagcttata----cataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 136  Q
    |||||||||||||||||||||||||||     ||||||| ||  |||||||||| |||||||| |||| ||||||||||||||||||| |||||||||||    
T  7706085 ctataaaaatagcttatgtaagcttatttatgcataagtacta-tcatgataagcacttgtgctataacctgcaaataagttgtttatacaaacaggccc 7706183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 24030490 - 24030601
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    |||||||| |||||||  ||||||||  |||||||||||| ||||||||||   |  ||| ||||||||||  ||||||| |||||||||||||||| ||    
T  24030490 ttaactttattttatcggttgctatagcaatagcttatgtgagcttatacacgcgcacttatcatgataagtgcttgtgctataagctgcaaataagctg 24030589  T
Q  120 tttatccaaaca 131  Q
    ||||||||||||    
T  24030590 tttatccaaaca 24030601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 12857793 - 12857910
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    |||||||  ||||||||||| ||||||||||| || || |||| |||| |||| |||||| | |||||| |   |||||||||||| | |||||||||||    
T  12857793 ttaacttcattttatcattttctataaaaataactaatataaggttatgcataggtgcttatgatgatacgtgtttgtgcaataagttacaaataagttg 12857892  T
Q  120 tttatccaaacaggccct 137  Q
    ||||||||||||| ||||    
T  12857893 tttatccaaacagaccct 12857910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 25461853 - 25461962
Alignment:
Q  30 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    |||||| | |||||||||||||||||||| ||||||||| ||||   ||| ||||||||||  ||||||  ||||||| |||||||  || |||||||||    
T  25461853 tttatcttctgctataaaaatagcttatgcaagcttatatataaccacttatcatgataagcgcttgtgttataagctacaaataacctgcttatccaaa 25461952  T
Q  130 caggccctta 139  Q
    ||||||||||    
T  25461953 caggccctta 25461962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 40426765 - 40426632
Alignment:
Q  2 agcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttg----tcatgataagaacttgt 97  Q
    |||| ||||| |||| | ||| |||| ||||||| |||||||||||| || || |||||||||| || |||||||| ||    ||||||||||  |||||    
T  40426765 agcaaatacaaaaacaatttagctttattttatcttttgctataaaa-taactcatgtaagcttgtatataagtgcatgcttatcatgataagtgcttgt 40426667  T
Q  98 gcaataagctgcaaataagttgtttatccaaacag 132  Q
    || ||||||||||||| ||||||||||||||||||    
T  40426666 gctataagctgcaaatgagttgtttatccaaacag 40426632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 16458075 - 16458188
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgc----aataagctgcaaataagttgtttat 124  Q
    ||||||| |||||||||||||||||||||| ||||||||| |||||  ||| ||| ||||||| ||||| |    ||||||||||||||||| | |||||    
T  16458075 ttttatcttttgctataaaaatagcttatgcaagcttatatataagcacttatcaggataagagcttgttccataaataagctgcaaataagctttttat 16458174  T
Q  125 ccaaacaggccctt 138  Q
    ||||  ||||||||    
T  16458175 ccaagaaggccctt 16458188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 19460508 - 19460572
Alignment:
Q  64 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    |||||||||||||||| |||||||||| | |||||| |||||||||||||||| |||||||||||    
T  19460508 ttatacataagtgcttatcatgataagcatttgtgctataagctgcaaataagctgtttatccaa 19460572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35446056 - 35445992
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagctt 65  Q
    |||| |||||| |||| | |||||||| |||||||||||||||||||||||||||||||||||||    
T  35446056 tagcgtatacaaaaacaatttaactttattttatcatttgctataaaaatagcttatgtaagctt 35445992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 10639951 - 10639825
Alignment:
Q  4 catatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaata 103  Q
    |||||||| |||| | |||| ||  ||||||| ||||||||| ||||||||||| ||  ||||||||||||||||| || ||||||  |||| |||  ||    
T  10639951 catatacaaaaacaatttaatttaattttatcttttgctatagaaatagcttatatagacttatacataagtgcttatcgtgataaccacttttgc-tta 10639853  T
Q  104 agctgcaaataagttgtttatccaaaca 131  Q
    || |||||||||| ||||||||||||||    
T  10639852 agttgcaaataagctgtttatccaaaca 10639825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 9202867 - 9202945
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    |||||||| |||||  ||| |||||||||  |||||||| |||||||||||||||| |||||||||||||||| |||||    
T  9202867 agcttatatataagcacttatcatgataaacacttgtgctataagctgcaaataagatgtttatccaaacagggcctta 9202945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 16938001 - 16938070
Alignment:
Q  66 atacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcc 135  Q
    |||||||||||||| |||||||||  |||||||  ||||||| |||||||||||||| ||||||||||||    
T  16938001 atacataagtgcttatcatgataaacacttgtgttataagcttcaaataagttgtttgtccaaacaggcc 16938070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 32941443 - 32941339
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    ||||||| |||||| ||||| |||| |||| |||||||||| |||| |||| ||||| ||||  ||| ||| ||||||||| |||||| |||||||||||    
T  32941443 ttttatcttttgctctaaaactagcctatgcaagcttatacgtaagcgcttatcatggtaagtgctt-tgctataagctgctaataagctgtttatccaa 32941345  T
Q  129 acaggc 134  Q
    ||||||    
T  32941344 acaggc 32941339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 40439070 - 40439162
Alignment:
Q  47 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcccttaa 140  Q
    ||||||||||||||||||||||||| ||||| | ||| ||||||  ||||||  ||||| |||||||||| |||||||||||||| ||| ||||    
T  40439070 aaatagcttatgtaagcttatacatgagtgcctatcaagataagcgcttgtg-tataaggtgcaaataagctgtttatccaaacaagccgttaa 40439162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 31051871 - 31051767
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    ||||||| ||||| ||| ||| |||||||||||||||||| ||||    || |||||||||| |||||||| ||||||||| ||||| | |||||| |||    
T  31051871 ttttatcttttgccatagaaacagcttatgtaagcttatagataatcatttatcatgataagcacttgtgctataagctgcgaataaatggtttattcaa 31051772  T
Q  129 acagg 133  Q
    |||||    
T  31051771 acagg 31051767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 25461064 - 25460957
Alignment:
Q  30 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    |||||| ||||||| |||||||||||| | ||||||||| |||||  ||| ||||||||||  ||| ||| |||||||  | ||||| ||||||||||||    
T  25461064 tttatcttttgctagaaaaatagcttacgcaagcttatatataagctcttatcatgataagtgcttatgctataagctaaatataagctgtttatccaaa 25460965  T
Q  130 caggccct 137  Q
    || |||||    
T  25460964 catgccct 25460957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 28776926 - 28776855
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 132  Q
    ||||||||||||||  ||| ||||||||||  |||  || ||||||||||||||||||||||||||||||||    
T  28776926 agcttatacataagcacttatcatgataagtgcttaggctataagctgcaaataagttgtttatccaaacag 28776855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 39105415 - 39105356
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgt 120  Q
    |||||||||||||| |||| |||||||||| |||| ||| ||||||||||||||||||||    
T  39105415 agcttatacataagcgcttatcatgataagcacttatgctataagctgcaaataagttgt 39105356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 25461744 - 25461842
Alignment:
Q  30 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||   ||| |||||| |||| | ||||  ||||||| |||||||| || ||||||||    
T  25461744 tttatcttttgctataaaaatagcttatgcaagcttatatataaccacttatcatgagaagagcctgtgttataagctacaaataagctgcttatccaa 25461842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 42500313 - 42500374
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 81  Q
    |||||||| ||||||| |||| ||||||||||||||||| |||||||||||| || ||||||    
T  42500313 ttaactttattttatcttttgatataaaaatagcttatgcaagcttatacattagcgcttgt 42500374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 6096494 - 6096427
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    ||||||||||||||||||| ||||||||||| |||   | || ||||||||||||||||||||| ||||||    
T  6096494 agcttatacataagtgcttatcatgataagagctt---ctatgagctgcaaataagttgtttatacaaaca 6096427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 13697847 - 13697959
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    ||||| || ||||||| |||||||||||||||  ||||| ||| |||| || ||   ||| |||||||||   ||| ||  |||||||||||||||||||    
T  13697847 ttaacattattttatcttttgctataaaaataatttatgcaagtttatgcaaaatcacttatcatgataaatgcttatgttataagctgcaaataagttg 13697946  T
Q  120 tttatccaaacag 132  Q
    |||||||||||||    
T  13697947 tttatccaaacag 13697959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 26005353 - 26005437
Alignment:
Q  47 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||||||| |||||||||||||||   || |||| |||||   |||||| ||||||| | |||||||||||||||||||||    
T  26005353 aaatagcttatgcaagcttatacataagcaattatcataataagtgtttgtgctataagcttctaataagttgtttatccaaaca 26005437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 34669836 - 34669916
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtt 121  Q
    ||||| |||||  ||| |||||| || | |||||||||| ||||||||||||||||||| |||||||  ||||||||||||    
T  34669836 ctatagaaataatttaggtaagcataaaaataagtgcttatcatgataagaacttgtgctataagcttgaaataagttgtt 34669916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 32703574 - 32703639
Alignment:
Q  68 acataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||| |||| |||||||||   ||||||| |||||||||||||||||||||| || |||||||    
T  32703574 acataagcgcttatcatgataaatgcttgtgctataagctgcaaataagttgtttttctaaacagg 32703639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 3932782 - 3932830
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaa-gcttatacataagtg 76  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||    
T  3932782 ttttatcttttgctataaaaatagcttatgtaattcttatacataagtg 3932830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 34736645 - 34736713
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    ||||||| |||||||| || ||||| ||||   |||||| |||||||||| ||||||||||||||||||    
T  34736645 agcttatgcataagtgattatcatggtaagtgtttgtgctataagctgcagataagttgtttatccaaa 34736713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 42646600 - 42646548
Alignment:
Q  57 tgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc 109  Q
    |||||||||||| ||||| |||| |||||||||| |||||||| |||||||||    
T  42646600 tgtaagcttatatataagcgcttatcatgataagcacttgtgctataagctgc 42646548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 10771997 - 10772068
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaaca 131  Q
    |||||||||||| ||| || |||||||||| |||| ||| |||||||||||| |||||||| ||| ||||||    
T  10771997 agcttatacatatgtgtttatcatgataagcacttatgctataagctgcaaattaagttgtatattcaaaca 10772068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 12433539 - 12433570
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacag 132  Q
    ||||||||||||||||||||||||||||||||    
T  12433539 ataagctgcaaataagttgtttatccaaacag 12433570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 3520340 - 3520302
Alignment:
Q  93 cttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  3520340 cttgtgctataagctgaaaataagttgtttatccaaaca 3520302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 135
Target Start/End: Complemental strand, 32009951 - 32009857
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcc 135  Q
    |||||||||||||||| |||||||||| |||||  || | ||||||||| | ||  | | |||||||||||||||| | |||||| ||| |||||    
T  32009951 ctataaaaatagcttacgtaagcttatgcataatcgcatatcatgataacagctcttactataagctgcaaataagctatttatcgaaataggcc 32009857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 42573898 - 42573972
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaacaggc 134  Q
    |||||||||||||| |||| ||||||||||  ||   || |||||||||||| |||| |||||||||||||||||    
T  42573898 agcttatacataagcgcttatcatgataagcgctcaggctataagctgcaaattaagctgtttatccaaacaggc 42573972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 7984929 - 7984868
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgttt 122  Q
    |||||| ||||||| |||| ||||||||||  | ||| | ||||||||||||||||||||||    
T  7984929 agcttaaacataagcgcttatcatgataagcgcatgtactataagctgcaaataagttgttt 7984868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 15015816 - 15015779
Alignment:
Q  37 tttgctataaaaatagcttatgtaagcttatacataag 74  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  15015816 tttgctacaaaaatagcttatgcaagcttatacataag 15015779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 29925814 - 29925769
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    ||||||| |||||||||||||||||||||| |||| ||||| ||||    
T  29925814 ttttatcttttgctataaaaatagcttatgcaagcatatacttaag 29925769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 34590355 - 34590420
Alignment:
Q  69 cataagtgcttgtcatgataagaacttgtgcaataagctgc-aaataagttgtttatccaaacagg 133  Q
    ||||||||||| |||||||||  |||| | | ||||||||| |||||||| |||||||||||||||    
T  34590355 cataagtgcttatcatgataaatacttatcctataagctgcaaaataagtcgtttatccaaacagg 34590420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 36227768 - 36227723
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    ||||||| |||||||||||||||| ||| | |||||||||||||||    
T  36227768 ttttatcttttgctataaaaatagattaagcaagcttatacataag 36227723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 465905 - 465841
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 125  Q
    |||||||| |||||||||| |||||| | || ||| ||  |||| ||||||||||||||||||||    
T  465905 agcttatatataagtgcttatcatgaaatgagcttatgttataaactgcaaataagttgtttatc 465841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 1465138 - 1465206
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 129  Q
    |||||||||||||| |||| || ||||||| |||| ||| |||| |||| |||||  ||||||||||||    
T  1465138 agcttatacataagcgcttatcttgataagcacttatgctataaactgcgaataatctgtttatccaaa 1465206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 10502557 - 10502601
Alignment:
Q  81 tcatgataagaacttgtgcaataagctgcaaataagttgtttatc 125  Q
    |||||||||||||| |||  |||||||||||||||||| ||||||    
T  10502557 tcatgataagaactcgtgttataagctgcaaataagttatttatc 10502601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 12857435 - 12857494
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataa 89  Q
    ||||||||||| |||||||||||| | || ||||||||| ||||||||||| | |||||||    
T  12857435 ttttatcattt-ctataaaaatagttaatataagcttatgcataagtgcttatgatgataa 12857494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 35299689 - 35299617
Alignment:
Q  50 tagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgttt 122  Q
    |||||||||||||||| | |||||||||   ||||||||||  |||||||  || |||||||||||| |||||    
T  35299689 tagcttatgtaagcttttgcataagtgccgatcatgataagtgcttgtgctctatgctgcaaataagctgttt 35299617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 37112398 - 37112438
Alignment:
Q  93 cttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||| ||||||||||| ||||||| ||||||||    
T  37112398 cttgtgcaataatctgcaaataagatgtttatacaaacagg 37112438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 133
Target Start/End: Complemental strand, 42100230 - 42100198
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||||||||| ||||||||||||||    
T  42100230 ataagctgcaaataagttatttatccaaacagg 42100198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 42228070 - 42228030
Alignment:
Q  93 cttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||| ||||||| |||||| ||||||||||||||||||    
T  42228070 cttgtgctataagcttcaaatatgttgtttatccaaacagg 42228030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 9e-30; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 17204139 - 17204001
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| |||| |  ||||||| ||||| ||||||||||||||| |||||||||||||| | ||||||| | || || |||||||  ||||| |     
T  17204139 tagcatatacaaaaacaatataactttattttaacatttgctataaaaacagcttatgtaagctaacacataagcggttatcgtgataagtgcttgttct 17204040  T
Q  101 ataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  17204039 ataagctgcaaataagttgtttatccaaacagtccctta 17204001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 50681158 - 50681296
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgca 100  Q
    ||||||||||| |||| | ||||| || ||||||| | | ||||||||||||||| |||||||||||||||||  |||| ||||||||||  |||||||     
T  50681158 tagcatatacaaaaacaatttaacattattttatcttatcctataaaaatagcttttgtaagcttatacataaacgcttatcatgataagttcttgtgct 50681257  T
Q  101 ataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    |||||||  |||||||||||||||||||||| |||||||    
T  50681258 ataagctataaataagttgtttatccaaacaagccctta 50681296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 19494914 - 19494784
Alignment:
Q  2 agcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaa 101  Q
    |||||||||| |||| | ||| |||| ||||||||||||||||| || |||||||||||| |||||||||| |||||| |||||| ||| |||||||| |    
T  19494914 agcatatacaaaaacaatttagctttattttatcatttgctatagaactagcttatgtaaccttatacataggtgcttatcatgaaaagtacttgtgcta 19494815  T
Q  102 taagctgcaaataagttgtttatccaaacag 132  Q
    |||||| | |||||| |||||||| ||||||    
T  19494814 taagctccgaataagatgtttatctaaacag 19494784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 43505938 - 43505824
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    ||||| || ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||  |   |||||| ||||| |||||||||||||    
T  43505938 ttaacgttattttatcttttgctataaaaatagcttatgcaagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttg 43505841  T
Q  120 tttatccaaacaggccc 136  Q
    |||||||||||| ||||    
T  43505840 tttatccaaacatgccc 43505824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 41336758 - 41336655
Alignment:
Q  4 catatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaata 103  Q
    |||||||| |||| | |||||||| ||||||| |||||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||||||| |||    
T  41336758 catatacaaaaacaatttaactttattttatc-tttgctataaaaatagcttatgcaagcctatacataagtgcttatcataataagaacttgtgctata 41336660  T
Q  104 agctg 108  Q
    |||||    
T  41336659 agctg 41336655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 31851436 - 31851343
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataa 115  Q
    |||||||| |||||||||||| |||||||||||||||||| ||||| ||||||| ||||| |||||||||| |||||||  |||||||||||||||    
T  31851436 ttaactttattttatcatttgttataaaaatagcttatgtgagcttctacataaatgcttatcatgataagcacttgtg--ataagctgcaaataa 31851343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 25904298 - 25904414
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataa----gtgcttgtcatgataagaacttgtgcaataagctgcaaataa 115  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||     ||||| ||||||||||  ||||||| |||| |||||||| |    
T  25904298 ttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcttgtgctataatctgcaaatga 25904397  T
Q  116 gttgtttatccaaacag 132  Q
    |||||||||||||||||    
T  25904398 gttgtttatccaaacag 25904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 45935291 - 45935421
Alignment:
Q  3 gcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaat 102  Q
    ||||||||| |||| | ||||| ||  || ||| ||||||||||| |||||||||| |||||||||||||||||       |||||||  |||| || ||    
T  45935291 gcatatacaaaaacaaattaacgttaattaatcttttgctataaacatagcttatgcaagcttatacataagtg-------tgataagcgcttgagctat 45935383  T
Q  103 aagctgcaaataagttgtttatccaaacaggcccttaa 140  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45935384 aagctgcaaataagttgtttatccaaacaggcccttaa 45935421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 35571951 - 35572022
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||| |||||    
T  35571951 agcttatacataagtgcttgtcatgataaccacttgtgctataagctgcaaataag-tgtttatccatacagg 35572022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 24169240 - 24169126
Alignment:
Q  23 actttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgttt 122  Q
    ||||| ||||| ||||||  |||||||||||||||||||||| ||||||||| |||  ||||||||||  || |||  ||||||||||| |||| |||||    
T  24169240 acttttttttaccatttgtcataaaaatagcttatgtaagctcatacataagcgctaatcatgataagtgctggtgatataagctgcaagtaagctgttt 24169141  T
Q  123 atccaaacaggccct 137  Q
     | ||||||||||||    
T  24169140 ctgcaaacaggccct 24169126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 54069486 - 54069623
Alignment:
Q  1 tagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgc-ttgtcatgataagaacttgtgc 99  Q
    ||||||||||| |||| | ||||| || ||||||| |||| |||||||||||| |||| |||||||||||||||||| || |||   ||||   ||||||    
T  54069486 tagcatatacaaaaacaatttaacattattttatcttttgatataaaaatagcatatgcaagcttatacataagtgctttatcacagtaagtgtttgtgc 54069585  T
Q  100 aataagctgcaaataagttgtttatccaaacaggccct 137  Q
     |||||||| |||||||||| || |||||| |||||||    
T  54069586 tataagctgaaaataagttgattctccaaagaggccct 54069623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 18815051 - 18814960
Alignment:
Q  42 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggc 134  Q
    |||||||| ||||||||||||||||| || |||||||| | |||||||| |||||||| |||||||||||||||    |||||||||||||||    
T  18815051 tataaaaacagcttatgtaagcttatgcaaaagtgcttat-atgataagcacttgtgccataagctgcaaataaaccatttatccaaacaggc 18814960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 29912928 - 29912814
Alignment:
Q  23 actttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgttt 122  Q
    ||||| ||||||  ||||||||| |||||||| |||||||  |||||| |||||||| | |||||||   ||| ||| |||||| |||||||| ||||||    
T  29912928 actttattttattttttgctatagaaatagctgatgtaagtgtatacaaaagtgcttattatgataactgcttatgctataagcagcaaataatttgttt 29912829  T
Q  123 atccaaacaggccct 137  Q
    | |||||||||||||    
T  29912828 agccaaacaggccct 29912814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 50662851 - 50662929
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    |||||||||||||  |||  ||||||||||  ||||||  ||||||||||||||||||||||||||||||| |||||||    
T  50662851 agcttatacataaacgctcatcatgataagctcttgtgatataagctgcaaataagttgtttatccaaacatgccctta 50662929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 33587048 - 33587103
Alignment:
Q  26 ttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 81  Q
    |||||||||| || ||||||||||||||||||| ||||||||||||||| ||||||    
T  33587048 ttgttttatctttcgctataaaaatagcttatgcaagcttatacataagcgcttgt 33587103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 3155554 - 3155476
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    ||||||||||||  ||||| ||||||||||  ||||| | |||||||||| |||||||||||||||||| ||| |||||    
T  3155554 agcttatacatacatgcttatcatgataagcgcttgtactataagctgcagataagttgtttatccaaatagggcctta 3155476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 22539166 - 22539244
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 139  Q
    |||||||||||||  |||||||||||||||  ||| ||| |||| ||||||||||||| |||||||||| ||| |||||    
T  22539166 agcttatacataaacgcttgtcatgataagggcttatgctataacctgcaaataagttatttatccaaagagggcctta 22539244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 44863081 - 44863151
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    ||||||| ||||||  ||| |||||| |||  ||||||| |||||||||||||||||||||||||||||||    
T  44863081 agcttatgcataagcacttatcatgacaagtgcttgtgctataagctgcaaataagttgtttatccaaaca 44863151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 15177290 - 15177359
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataa 89  Q
    ||||| || ||||||| || ||||| ||||||||||||| ||||||||||||| |||||| |||||||||    
T  15177290 ttaacgttattttatctttagctattaaaatagcttatgcaagcttatacatacgtgcttatcatgataa 15177359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 22030184 - 22030116
Alignment:
Q  21 taactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataag 90  Q
    ||||||| ||||||| ||| ||||| ||||||||||||| |||||||||||||| |||| ||||||||||    
T  22030184 taactttattttatccttt-ctatagaaatagcttatgtgagcttatacataagcgcttatcatgataag 22030116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 1242380 - 1242457
Alignment:
Q  37 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 118  Q
    ||||||||||||||||||||||    |||||| |||||||||| | |||||||| |||| | | ||||||||||||||||||    
T  1242380 tttgctataaaaatagcttatg----cttataaataagtgcttattatgataagcacttatactataagctgcaaataagtt 1242457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 44797868 - 44797759
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    ||||| |||||||||| |||||||||||||||||||||| ||      | ||||   |||  ||||||||   ||||||| ||||| |||||||||||||    
T  44797868 ttaacgttgttttatcttttgctataaaaatagcttatgcaa------atataatctcttaccatgataatcgcttgtgctataagttgcaaataagttg 44797775  T
Q  120 tttatccaaacaggcc 135  Q
    ||||||||||||||||    
T  44797774 tttatccaaacaggcc 44797759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 42404068 - 42404147
Alignment:
Q  2 agcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 81  Q
    ||||| |||| |||| | ||||| || ||||||| ||||||||||||| ||| |||| || |||||||||||||||||||    
T  42404068 agcatgtacaaaaacaatttaacattattttatcttttgctataaaaagagcgtatgcaaacttatacataagtgcttgt 42404147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 15173397 - 15173506
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 128  Q
    ||||||| || ||||| ||| ||||||||| ||||||||||||| | |||| ||||||||||   |||||| | |||||| ||||||| | ||||| |||    
T  15173397 ttttatctttagctattaaagtagcttatgcaagcttatacatatgcgcttatcatgataagcgtttgtgctacaagctgaaaataagctatttat-caa 15173495  T
Q  129 acaggccctta 139  Q
    |||| ||||||    
T  15173496 acagtccctta 15173506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 20109553 - 20109515
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttat 67  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  20109553 ttttatcatttgctataaaaatagcctatgtaagcttat 20109515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 26520351 - 26520421
Alignment:
Q  64 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaacagg 133  Q
    |||||||||||||||| |||||||||  |||| ||| | |||| ||||| |||||||||||||||||||||    
T  26520351 ttatacataagtgcttatcatgataaacacttatgctagaagcagcaaattaagttgtttatccaaacagg 26520421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 27027 - 27088
Alignment:
Q  76 gcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccct 137  Q
    |||| ||||||||||  ||||||| |||||||||||| ||| ||||||||||||||| ||||    
T  27027 gcttatcatgataagcgcttgtgctataagctgcaaacaagatgtttatccaaacagaccct 27088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 31076483 - 31076528
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataag 74  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||||    
T  31076483 ttttatcttttgctctaaaaatagcttatgcaagcttatacataag 31076528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 1203236 - 1203303
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||| || ||||| |||||||||| ||||     ||||||||||||||| |||||||||||||||||    
T  1203236 agcttatacaaaaatgcttttcatgataagcactt-----ataagctgcaaataaattgtttatccaaacagg 1203303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 4212851 - 4212811
Alignment:
Q  93 cttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  4212851 cttgtgctataagctgaaaataagttgtttatccaaacagg 4212811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 13216285 - 13216345
Alignment:
Q  13 aaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataa 73  Q
    |||||| |||||||| ||||||| ||||||||||||||| ||| |||||| |||| |||||    
T  13216285 aaacgatttaactttattttatcttttgctataaaaataacttgtgtaagtttatgcataa 13216345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 27330186 - 27330226
Alignment:
Q  93 cttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  27330186 cttgtgctataagctacaaataagttgtttatccaaacagg 27330226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 46592315 - 46592415
Alignment:
Q  37 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 136  Q
    |||||||||||||||||| |||  ||||||| |||| |  ||| |||| |||||  |||||||  ||||||| ||||||| || |||| |||||||||||    
T  46592315 tttgctataaaaatagctcatgctagcttatgcataggcacttatcattataagtgcttgtgctttaagctgtaaataagctggttatacaaacaggccc 46592414  T
Q  137 t 137  Q
    |    
T  46592415 t 46592415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 47119086 - 47119134
Alignment:
Q  83 atgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    ||||||||  ||||||| ||||| |||||||||||||||||||||||||    
T  47119086 atgataagtgcttgtgctataagttgcaaataagttgtttatccaaaca 47119134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 2987140 - 2987069
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaaca 131  Q
    |||||||| |||||||||| |||||||||  |||| ||  |||||||||||| ||| |||||||||||||||    
T  2987140 agcttataaataagtgcttatcatgataaacacttatgttataagctgcaaattaacttgtttatccaaaca 2987069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 11389474 - 11389407
Alignment:
Q  64 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||||||  ||| |||||||||| |||  ||  |||| ||||||||||||||||||||||||||    
T  11389474 ttatacataagcacttatcatgataagcactcatgatataaactgcaaataagttgtttatccaaaca 11389407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 34430832 - 34430871
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacaggcccttaa 140  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  34430832 ataagctgcaaataagttgtttaaccaaacaggaccttaa 34430871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 3070061 - 3070127
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatga 86  Q
    |||||||| ||| || ||||| |||||||||| |||||||||||||||| || |||| || ||||||    
T  3070061 ttaactttatttgattatttgttataaaaataacttatgtaagcttatatatgagtgtttatcatga 3070127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 16200090 - 16200164
Alignment:
Q  41 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgc-aataagctgcaaata 114  Q
    ||||||||||||||||||||| |||| || ||||||||| | ||||||||   |||||| |||||| ||||||||    
T  16200090 ctataaaaatagcttatgtaatcttacacgtaagtgcttattatgataagtgtttgtgctaataagttgcaaata 16200164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 20108946 - 20108904
Alignment:
Q  95 tgtgcaataagctgcaaataagttgtttatccaaacaggccct 137  Q
    ||||| |||||||||||| |||||||||||||||| |||||||    
T  20108946 tgtgctataagctgcaaaaaagttgtttatccaaataggccct 20108904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 39603594 - 39603636
Alignment:
Q  95 tgtgcaataagctgcaaataagttgtttatccaaacaggccct 137  Q
    ||||| |||||||||||||||| |||||||||||| |||||||    
T  39603594 tgtgctataagctgcaaataagctgtttatccaaataggccct 39603636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 131
Target Start/End: Complemental strand, 49202557 - 49202527
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||||||||||||||||||||||||||    
T  49202557 ataagctgcaaataagttgtttatccaaaca 49202527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 131
Target Start/End: Complemental strand, 25885785 - 25885756
Alignment:
Q  102 taagctgcaaataagttgtttatccaaaca 131  Q
    ||||||||||||||||||||||||||||||    
T  25885785 taagctgcaaataagttgtttatccaaaca 25885756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 30066885 - 30066958
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaacagg 133  Q
    |||||||||| |||||||| |||| |||||  ||| ||| |||||||||||| ||| |||||||| ||||||||    
T  30066885 agcttatacacaagtgcttatcattataagcgcttatgctataagctgcaaattaaattgtttatgcaaacagg 30066958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 34213737 - 34213778
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacaggcccttaaca 142  Q
    ||||||||||||||||||| ||||||||||||| || |||||    
T  34213737 ataagctgcaaataagttgcttatccaaacaggaccataaca 34213778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 22030120 - 22030092
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaa 129  Q
    |||||||||||||||||||||||||||||    
T  22030120 ataagctgcaaataagttgtttatccaaa 22030092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 133
Target Start/End: Complemental strand, 23319759 - 23319727
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacagg 133  Q
    ||||||||||||||||||| |||||||||||||    
T  23319759 ataagctgcaaataagttgcttatccaaacagg 23319727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 35571747 - 35571818
Alignment:
Q  61 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 133  Q
    |||||||||||||||| || |||| ||||| ||||  || |||| | ||||||||| ||||||||||||||||    
T  35571747 agcttatacataagtg-ttatcatcataagcacttccgctataaacggcaaataaggtgtttatccaaacagg 35571818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 39011215 - 39011251
Alignment:
Q  101 ataagctgcaaataagttgtttatccaaacaggccct 137  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  39011215 ataagctacaaataagtcgtttatccaaacaggccct 39011251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 158089 - 157970
Alignment:
Q  20 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 119  Q
    ||||||||  |||||  ||| |||||||||||||||||||||||| || ||||||   || |||| |||||   |||||| |||||||||||||||| ||    
T  158089 ttaactttaatttatgtttttctataaaaatagcttatgtaagctaatgcataagcaattatcatcataagtgtttgtgctataagctgcaaataagctg 157990  T
Q  120 tttatccaaacaggccctta 139  Q
    ||||||||||||||||||||    
T  157989 tttatccaaacaggccctta 157970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 207678 - 207774
Alignment:
Q  29 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 125  Q
    ||||||| |||| ||  ||||||||||||| |||||||||||||||||||| |||||||||| |||||||  || |  ||||||||||| |||||||    
T  207678 ttttatcttttgttactaaaatagcttatgcaagcttatacataagtgcttatcatgataagcacttgtggtatcacatgcaaataagtggtttatc 207774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 58540 - 58475
Alignment:
Q  66 atacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 131  Q
    |||||||||||||| | |||| ||| ||||||||  ||||||||||||||||||||||||||||||    
T  58540 atacataagtgcttattatgacaagcacttgtgctctaagctgcaaataagttgtttatccaaaca 58475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University