View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18740_low_4 (Length: 506)

Name: NF18740_low_4
Description: NF18740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18740_low_4
NF18740_low_4
[»] chr6 (16 HSPs)
chr6 (16-491)||(7394236-7394690)
chr6 (14-134)||(9442268-9442389)
chr6 (20-136)||(14505716-14505833)
chr6 (22-134)||(27534314-27534427)
chr6 (16-134)||(5863722-5863841)
chr6 (22-135)||(10188430-10188544)
chr6 (22-134)||(3484279-3484392)
chr6 (22-134)||(24225320-24225432)
chr6 (16-134)||(12141016-12141135)
chr6 (16-136)||(11762063-11762184)
chr6 (16-134)||(32853463-32853582)
chr6 (16-134)||(2366945-2367064)
chr6 (16-134)||(32052675-32052794)
chr6 (20-120)||(30815884-30815985)
chr6 (16-71)||(20611260-20611316)
chr6 (34-125)||(33061985-33062077)
[»] chr1 (36 HSPs)
chr1 (16-136)||(40087808-40087929)
chr1 (22-134)||(13390074-13390187)
chr1 (22-135)||(20774250-20774364)
chr1 (20-125)||(44792633-44792739)
chr1 (16-137)||(34610690-34610812)
chr1 (16-125)||(34673609-34673719)
chr1 (16-135)||(34060370-34060484)
chr1 (20-125)||(44615830-44615936)
chr1 (22-125)||(23493681-23493785)
chr1 (22-136)||(36187578-36187693)
chr1 (16-125)||(5180679-5180789)
chr1 (22-135)||(18354427-18354541)
chr1 (16-135)||(24710476-24710596)
chr1 (22-135)||(28297551-28297665)
chr1 (16-137)||(45866536-45866658)
chr1 (16-136)||(9983236-9983357)
chr1 (16-116)||(49742271-49742372)
chr1 (16-134)||(38686272-38686391)
chr1 (22-135)||(29936035-29936149)
chr1 (16-125)||(51421523-51421633)
chr1 (22-134)||(23966477-23966590)
chr1 (66-134)||(49251133-49251201)
chr1 (16-134)||(17092310-17092429)
chr1 (83-137)||(14890751-14890805)
chr1 (16-136)||(3628325-3628446)
chr1 (22-134)||(42439991-42440104)
chr1 (20-124)||(10778969-10779073)
chr1 (60-137)||(14892322-14892399)
chr1 (16-124)||(50427004-50427113)
chr1 (16-135)||(16433511-16433631)
chr1 (98-134)||(37743181-37743217)
chr1 (16-110)||(24237111-24237206)
chr1 (16-134)||(32594515-32594634)
chr1 (84-134)||(17134560-17134610)
chr1 (16-52)||(2514358-2514394)
chr1 (26-125)||(16903132-16903232)
[»] chr4 (38 HSPs)
chr4 (16-142)||(6482376-6482503)
chr4 (22-134)||(7608595-7608708)
chr4 (16-134)||(1724661-1724780)
chr4 (16-134)||(15987580-15987699)
chr4 (16-134)||(55826974-55827093)
chr4 (16-136)||(44887529-44887650)
chr4 (16-129)||(37348753-37348867)
chr4 (22-133)||(31918917-31919029)
chr4 (16-134)||(6382625-6382744)
chr4 (22-136)||(11123224-11123339)
chr4 (16-134)||(26564456-26564575)
chr4 (22-138)||(5902971-5903088)
chr4 (14-134)||(47550702-47550823)
chr4 (22-129)||(39046587-39046695)
chr4 (16-134)||(11027697-11027816)
chr4 (20-129)||(19534085-19534195)
chr4 (16-125)||(29755682-29755792)
chr4 (22-134)||(16217025-16217138)
chr4 (16-135)||(4766666-4766786)
chr4 (22-136)||(39374965-39375079)
chr4 (16-134)||(42774386-42774505)
chr4 (16-134)||(43892136-43892255)
chr4 (22-116)||(44317187-44317282)
chr4 (14-121)||(42299464-42299572)
chr4 (20-122)||(9229919-9230022)
chr4 (16-134)||(48459111-48459230)
chr4 (60-134)||(21423486-21423560)
chr4 (20-134)||(3737422-3737537)
chr4 (26-121)||(10286906-10287002)
chr4 (86-134)||(12825881-12825929)
chr4 (99-138)||(24636955-24636994)
chr4 (22-119)||(36918705-36918803)
chr4 (16-101)||(47239736-47239822)
chr4 (60-129)||(13770859-13770928)
chr4 (60-129)||(25265603-25265672)
chr4 (83-135)||(30034259-30034311)
chr4 (60-124)||(31752175-31752239)
chr4 (98-134)||(35304940-35304976)
[»] chr8 (32 HSPs)
chr8 (16-134)||(34776081-34776200)
chr8 (16-134)||(5858807-5858926)
chr8 (20-134)||(9642721-9642836)
chr8 (20-125)||(24568567-24568673)
chr8 (22-137)||(32302676-32302792)
chr8 (16-134)||(2076186-2076305)
chr8 (16-125)||(29109168-29109278)
chr8 (22-134)||(24927568-24927681)
chr8 (22-134)||(28977470-28977583)
chr8 (22-134)||(34301510-34301623)
chr8 (16-135)||(17468874-17468994)
chr8 (20-134)||(20399255-20399370)
chr8 (16-134)||(27058680-27058799)
chr8 (22-134)||(17220336-17220449)
chr8 (22-125)||(27932063-27932167)
chr8 (16-137)||(6388915-6389038)
chr8 (20-134)||(14185963-14186078)
chr8 (16-135)||(4231069-4231189)
chr8 (16-134)||(40248692-40248811)
chr8 (17-126)||(1012258-1012367)
chr8 (16-129)||(39445912-39446026)
chr8 (22-135)||(45235688-45235802)
chr8 (16-134)||(24870373-24870492)
chr8 (16-125)||(18151083-18151193)
chr8 (16-136)||(11255355-11255476)
chr8 (16-125)||(35215111-35215220)
chr8 (26-124)||(17084530-17084629)
chr8 (16-100)||(1063162-1063247)
chr8 (17-135)||(34139064-34139182)
chr8 (60-125)||(31323497-31323562)
chr8 (16-52)||(2190232-2190268)
chr8 (16-48)||(34021182-34021214)
[»] chr3 (34 HSPs)
chr3 (16-134)||(4016383-4016502)
chr3 (20-136)||(41937403-41937520)
chr3 (16-134)||(39728301-39728420)
chr3 (16-138)||(44638890-44639013)
chr3 (16-136)||(7470128-7470248)
chr3 (20-136)||(42758017-42758134)
chr3 (22-134)||(6738728-6738841)
chr3 (22-134)||(23547334-23547447)
chr3 (16-136)||(34154033-34154154)
chr3 (16-139)||(4557655-4557779)
chr3 (20-118)||(31127149-31127248)
chr3 (22-136)||(39655619-39655734)
chr3 (16-134)||(44107149-44107268)
chr3 (60-137)||(44162400-44162477)
chr3 (22-134)||(44252360-44252473)
chr3 (14-140)||(48306884-48307011)
chr3 (20-110)||(54316786-54316877)
chr3 (20-125)||(55439033-55439139)
chr3 (22-110)||(49025325-49025414)
chr3 (22-134)||(49579683-49579796)
chr3 (22-129)||(16841618-16841726)
chr3 (22-116)||(23580465-23580559)
chr3 (22-120)||(29283968-29284067)
chr3 (26-139)||(30616664-30616778)
chr3 (17-134)||(34025578-34025696)
chr3 (16-134)||(23154357-23154476)
chr3 (16-134)||(48391160-48391279)
chr3 (62-136)||(30682474-30682548)
chr3 (16-125)||(17146500-17146607)
chr3 (61-125)||(19111364-19111428)
chr3 (98-134)||(44953847-44953883)
chr3 (16-134)||(22536194-22536312)
chr3 (16-114)||(53631540-53631639)
chr3 (60-110)||(52197795-52197845)
[»] chr2 (28 HSPs)
chr2 (22-135)||(13830354-13830468)
chr2 (22-134)||(31942511-31942624)
chr2 (16-134)||(10208780-10208899)
chr2 (20-137)||(6028243-6028361)
chr2 (22-134)||(7315006-7315119)
chr2 (20-135)||(15546312-15546428)
chr2 (16-134)||(36128458-36128577)
chr2 (16-125)||(9632026-9632136)
chr2 (22-135)||(10920281-10920395)
chr2 (22-134)||(11009092-11009205)
chr2 (16-115)||(16227040-16227140)
chr2 (16-134)||(37999105-37999223)
chr2 (22-134)||(30846564-30846677)
chr2 (16-134)||(37473080-37473199)
chr2 (16-136)||(45256441-45256562)
chr2 (28-113)||(18106441-18106527)
chr2 (20-121)||(22900419-22900521)
chr2 (91-135)||(8916355-8916399)
chr2 (16-125)||(13705712-13705816)
chr2 (66-136)||(37319561-37319632)
chr2 (16-109)||(37106350-37106444)
chr2 (22-118)||(24414488-24414585)
chr2 (16-80)||(35336290-35336355)
chr2 (60-124)||(12194223-12194285)
chr2 (12-74)||(40734943-40735006)
chr2 (22-51)||(4427608-4427637)
chr2 (16-116)||(10212076-10212177)
chr2 (22-137)||(42798345-42798461)
[»] chr5 (32 HSPs)
chr5 (16-135)||(40517425-40517545)
chr5 (16-125)||(3565070-3565179)
chr5 (22-134)||(22695258-22695371)
chr5 (20-129)||(30115119-30115229)
chr5 (16-134)||(15889830-15889949)
chr5 (16-125)||(1218415-1218525)
chr5 (20-125)||(38006825-38006931)
chr5 (16-134)||(20973836-20973955)
chr5 (66-134)||(33862591-33862659)
chr5 (16-134)||(17853631-17853749)
chr5 (16-134)||(30996217-30996335)
chr5 (22-134)||(28045271-28045384)
chr5 (22-137)||(6093462-6093578)
chr5 (67-134)||(4582839-4582906)
chr5 (16-125)||(12866903-12867013)
chr5 (16-134)||(2413069-2413189)
chr5 (16-115)||(27088702-27088802)
chr5 (20-134)||(12447002-12447116)
chr5 (16-108)||(5909033-5909126)
chr5 (16-116)||(42987828-42987929)
chr5 (23-134)||(6156268-6156379)
chr5 (16-134)||(6369313-6369431)
chr5 (99-134)||(12712960-12712995)
chr5 (99-134)||(12774224-12774259)
chr5 (16-54)||(18116873-18116911)
chr5 (16-77)||(42717976-42718038)
chr5 (97-134)||(10126726-10126763)
chr5 (22-134)||(35311436-35311549)
chr5 (22-117)||(4920468-4920564)
chr5 (97-129)||(10822970-10823002)
chr5 (94-134)||(27900891-27900931)
chr5 (91-135)||(28569565-28569609)
[»] scaffold0014 (1 HSPs)
scaffold0014 (20-134)||(14498-14613)
[»] chr7 (47 HSPs)
chr7 (22-134)||(38152524-38152637)
chr7 (16-135)||(18125578-18125698)
chr7 (16-134)||(3227891-3228010)
chr7 (16-134)||(7779631-7779750)
chr7 (16-138)||(45886115-45886238)
chr7 (16-129)||(37103503-37103617)
chr7 (16-135)||(17851488-17851608)
chr7 (22-129)||(25783257-25783364)
chr7 (16-134)||(10072112-10072231)
chr7 (16-134)||(30650254-30650373)
chr7 (16-134)||(44986248-44986366)
chr7 (16-136)||(25980274-25980394)
chr7 (16-134)||(10996197-10996316)
chr7 (26-137)||(5567501-5567613)
chr7 (16-134)||(33840698-33840817)
chr7 (22-132)||(44734715-44734826)
chr7 (16-137)||(25905249-25905371)
chr7 (22-134)||(16865793-16865906)
chr7 (22-134)||(21702303-21702416)
chr7 (26-134)||(35074093-35074201)
chr7 (16-124)||(37196338-37196447)
chr7 (16-136)||(41741799-41741920)
chr7 (66-134)||(44658641-44658709)
chr7 (16-134)||(2632319-2632436)
chr7 (20-134)||(18826224-18826338)
chr7 (20-134)||(37578887-37579002)
chr7 (16-134)||(38140140-38140259)
chr7 (59-138)||(43507053-43507132)
chr7 (22-134)||(37181898-37182009)
chr7 (22-134)||(39316618-39316730)
chr7 (16-124)||(46127513-46127622)
chr7 (14-125)||(41103276-41103388)
chr7 (16-134)||(32545798-32545917)
chr7 (20-134)||(27850678-27850792)
chr7 (16-124)||(3773636-3773745)
chr7 (66-134)||(16075319-16075388)
chr7 (22-134)||(42908407-42908520)
chr7 (16-115)||(23328253-23328353)
chr7 (91-138)||(5432462-5432509)
chr7 (16-78)||(17884912-17884975)
chr7 (20-134)||(42005525-42005640)
chr7 (16-134)||(44794376-44794495)
chr7 (92-134)||(3920162-3920204)
chr7 (91-140)||(43550904-43550953)
chr7 (22-134)||(45709208-45709321)
chr7 (20-52)||(16078720-16078752)
chr7 (16-103)||(45379784-45379872)
[»] scaffold0097 (1 HSPs)
scaffold0097 (16-125)||(33212-33321)
[»] scaffold0036 (1 HSPs)
scaffold0036 (16-136)||(33012-33133)
[»] scaffold0189 (1 HSPs)
scaffold0189 (22-137)||(3874-3990)
[»] scaffold0007 (1 HSPs)
scaffold0007 (16-124)||(199143-199252)
[»] scaffold0294 (1 HSPs)
scaffold0294 (20-135)||(14395-14511)
[»] scaffold0095 (1 HSPs)
scaffold0095 (16-129)||(32874-32988)
[»] scaffold0135 (1 HSPs)
scaffold0135 (20-122)||(35785-35888)
[»] scaffold0519 (1 HSPs)
scaffold0519 (16-136)||(9919-10040)
[»] scaffold0022 (1 HSPs)
scaffold0022 (16-134)||(90216-90335)
[»] scaffold0008 (2 HSPs)
scaffold0008 (16-134)||(67345-67464)
scaffold0008 (16-134)||(75188-75307)
[»] scaffold1630 (1 HSPs)
scaffold1630 (16-134)||(1242-1361)
[»] scaffold0198 (1 HSPs)
scaffold0198 (83-134)||(3754-3805)


Alignment Details
Target: chr6 (Bit Score: 323; Significance: 0; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 16 - 491
Target Start/End: Original strand, 7394236 - 7394690
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaaggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccc 115  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7394236 atgaggttcaatttctcatccccgttgggtatgggtatggtaaaggtaaatatatgagaattgagtttggggacagggaatgtaaaacccgtccccaccc 7394335  T
Q  116 cgccccattgtcatacctaattgcagacgtatgttttcttatcatactcttaattcttaacctaaacaagagagcattttcaaggcattagaggtaattt 215  Q
     |||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                     |    
T  7394336 tgccctattgtcacatctaattgcagacgtatgttttcttatcatactcttaattcttaacctaaacaagagagcatt---------------------t 7394414  T
Q  216 tcaaggcattagacgtagaccagtaataaagtttctcacaatataatttaattgatagagatattacaatatgtaagagttagagtttgaatttgagatt 315  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  7394415 tcaaggcattagaggtagagcagtaataaagtttctcacaatatagcttagttgatagagatattacaatatgtaaaagtcagagtctgaatttgagatt 7394514  T
Q  316 cctcatttattcattttaaggaggaaaattttgataactattaggatactnnnnnnnggtcgaccaataaatatattgttgcctcaataccttcaaatat 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  7394515 cctcatttattcattttaaggaggaaaattttgataactattaggatactaaaaaaaggtcgaccaataaatatattgttgcctcaataccttcaaatat 7394614  T
Q  416 gactcatttatgtctaaccatattaacaaaagacatcacatttattacttatttgaagttttaccattgttggaag 491  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7394615 gactcatttatgtctaaccatattaacaaaagacatcacatttattacttatttgaagttttaccattgttggaag 7394690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 9442389 - 9442268
Alignment:
Q  14 gaatgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtcccca 112  Q
    ||||||| ||||||||||||||||| ||||||||||||| | ||| || ||| ||||||||||||| || ||| ||| ||||| ||||||||||||||||    
T  9442389 gaatgagattcaatttctcatccccgttggatatgggtaaggtaacgggtaagtatatgagaatcgggtatggagacggggaaggtaaaacccgtcccca 9442290  T
Q  113 ccccgccccattgtcataccta 134  Q
    ||||| ||||||||||| ||||    
T  9442289 ccccgtcccattgtcatgccta 9442268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 14505833 - 14505716
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||| ||||||||||||| | ||| || ||| ||||||||||||| || |||||||  ||||||||||||||||||||||| |||    
T  14505833 ggttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatggggacgaggaatgtaaaacccgtccccacctcgc 14505734  T
Q  119 cccattgtcatacctaat 136  Q
    || |||| ||| ||||||    
T  14505733 ccaattgccatgcctaat 14505716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 27534427 - 27534314
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaaggtaaa-tatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| ||| || ||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||    
T  27534427 ttcaatttctcatccccgttgggtatgggtagggtaacggttaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccc 27534328  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  27534327 cattgccatgccta 27534314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 5863722 - 5863841
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||||||||  || ||||||| ||||| ||||||||||||||||||    
T  5863722 atgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcaggtatggggacggggaaggtaaaacccgtccccacc 5863821  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  5863822 ccgccccattgccatgccta 5863841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 10188430 - 10188544
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| |||||| ||||||||||||| || ||||||  ||||| ||||||| ||||||||||||||||    
T  10188430 ttcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatggggatggggaaggtaaaactcgtccccaccccgccc 10188529  T
Q  121 cattgtcatacctaa 135  Q
    ||||| ||| |||||    
T  10188530 cattgccatgcctaa 10188544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 3484279 - 3484392
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||||||||| || | ||||| ||||| ||||||||||||||||||||||||    
T  3484279 ttcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatagggacggggaaggtaaaacccgtccccaccccgccc 3484378  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  3484379 cattgccatgccta 3484392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 24225432 - 24225320
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaag-gtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    |||||||||||||| || ||||||||||||| | ||| | |||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||    
T  24225432 ttcaatttctcatcaccgttggatatgggtagggtaacgagtaagtatatgagaatcgggtatggggac-gggaaggtaaaacccgtccccaccccgccc 24225334  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  24225333 cattgccatgccta 24225320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 12141135 - 12141016
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| ||||||||   |||  ||||| ||||||||||||| || ||||||| ||||| ||||||| ||||||||||    
T  12141135 atgagattcaatttctcatccccgttgggtatgggtagagtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaactcgtccccacc 12141036  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  12141035 ccgccccattgccatgccta 12141016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 11762184 - 11762063
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    |||||||||||||||||| |||| ||||||||| ||| | ||| |||||| ||||| ||||||| || |||  || ||||||||||||||||||||||||    
T  11762184 atgaggttcaatttctcacccccgttggatatgagtagggtaacaggtaagtatataagaatcgtgtatggaaacggggaatgtaaaacccgtccccacc 11762085  T
Q  115 ccgccccattgtcatacctaat 136  Q
    |  |||||||| ||| ||||||    
T  11762084 cttccccattgccatgcctaat 11762063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 32853582 - 32853463
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaa-ggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | |||  ||||| ||||||| ||||| || ||||||  ||||| |||||||||||| |||||    
T  32853582 atgagattcaatttctcatccccgttgggtatgggtagggtaactggtaagtatatgataatcgggtatggggatggggaaggtaaaacccgtctccacc 32853483  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  32853482 ccgccccattgccatgccta 32853463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 2367064 - 2366945
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||| ||| | ||| | |||| |||||||||||||  | ||||||   |||| ||||||||||||||||||    
T  2367064 atgagattcaatttctcatccccgttgggtatgagtagggtaacatgtaagtatatgagaatcggatatggggatgaggaaggtaaaacccgtccccacc 2366965  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  2366964 ccgccccattgccatgccta 2366945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 32052794 - 32052675
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||||||| | |||  ||||| ||||||||||||| || || |||| ||||| ||||||| |||| ||| |    
T  32052794 atgagattcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatgaggacggggaaggtaaaactcgtctccatc 32052695  T
Q  115 ccgccccattgtcataccta 134  Q
    |||| |||||| ||| ||||    
T  32052694 ccgctccattgccatgccta 32052675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 30815985 - 30815884
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||  |||||||| | || | ||| || ||| ||||||||||||  || ||| ||| ||||||||||||||| ||||||||||||    
T  30815985 ggttcaatttctcatccctgttggatatagatagggtaacgggtaagtatatgagaatcaggtatggagacggggaatgtaaaacccatccccaccccgc 30815886  T
Q  119 cc 120  Q
    ||    
T  30815885 cc 30815884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 20611260 - 20611316
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatg 71  Q
    ||||| ||||||||||||||||| |||| |||||||||| ||| |||||| ||||||    
T  20611260 atgagattcaatttctcatccccgttgggtatgggtatggtaacaggtaagtatatg 20611316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 33062077 - 33061985
Alignment:
Q  34 tccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattg 125  Q
    |||||||||| |||||||| | ||| || ||| ||||||||||||| || |||||||  |||| ||||||  | |||| ||||||||||||||    
T  33062077 tccccattgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacgaggaaggtaaaattcatccctaccccgccccattg 33061985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 40087808 - 40087929
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||||||||||||||||| |||||||| | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||    
T  40087808 atgagattcaatttctcatccccattgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacc 40087907  T
Q  115 ccgccccattgtcatacctaat 136  Q
    ||||||||||||||| ||||||    
T  40087908 ccgccccattgtcatgcctaat 40087929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 13390187 - 13390074
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaaggtaaa-tatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| ||||||||||||| | ||| ||| || ||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||    
T  13390187 ttcaatttctcatccccgttggatatgggtagggtaacggttaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccc 13390088  T
Q  121 cattgtcataccta 134  Q
    ||||||||| ||||    
T  13390087 cattgtcatgccta 13390074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 20774364 - 20774250
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| ||||||||||||| | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||    
T  20774364 ttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccc 20774265  T
Q  121 cattgtcatacctaa 135  Q
    ||||| ||| |||||    
T  20774264 cattgccatgcctaa 20774250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 44792739 - 44792633
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||| ||| ||||||||| | ||| || ||| ||||||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  44792739 ggttcaatttctcatccccgttgaatatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaatgtaaaacccgtccccaccccgc 44792640  T
Q  119 cccattg 125  Q
    |||||||    
T  44792639 cccattg 44792633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 34610812 - 34610690
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaag-gtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | ||| | |||| ||||||||||||| || ||||||| ||||| ||||||||| ||||||||    
T  34610812 atgagattcaatttctcatccccgttgggtatgggtagggtaacgagtaagtatatgagaatcgggtatggggacggggaaggtaaaacccatccccacc 34610713  T
Q  115 ccgccccattgtcatacctaatt 137  Q
    ||||||||||| ||| |||||||    
T  34610712 ccgccccattgccatgcctaatt 34610690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 34673609 - 34673719
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||||||||||||||||| ||||||||||||| | ||| || ||| |||||||||||||  | ||||||   |||||||||||||||||||||||    
T  34673609 atgaggttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcggatatggggatgaggaatgtaaaacccgtccccacc 34673708  T
Q  115 ccgccccattg 125  Q
    |||||||||||    
T  34673709 ccgccccattg 34673719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 34060370 - 34060484
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaaggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccc 115  Q
    ||||| ||||||||||||||| | ||| ||||||||| | | |||     |||||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  34060370 atgagattcaatttctcatcctcgttgaatatgggtagggttaag-----tatatgagaatcgagtatggggactgggaaggtaaaacccgtccccaccc 34060464  T
Q  116 cgccccattgtcatacctaa 135  Q
    |||||||||||||| |||||    
T  34060465 cgccccattgtcatgcctaa 34060484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 44615830 - 44615936
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||| ||  ||||||||| | ||| || ||| || |||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  44615830 ggttcaatttctcatccccgttaaatatgggtagggtaacgggtaagtacatgagaatcgggtatggggacggggaatgtaaaacccgtccccaccccgc 44615929  T
Q  119 cccattg 125  Q
    |||||||    
T  44615930 cccattg 44615936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 23493681 - 23493785
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| ||| ||||||||| | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||    
T  23493681 ttcaatttctcatccccgttgaatatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccc 23493780  T
Q  121 cattg 125  Q
     ||||    
T  23493781 tattg 23493785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 36187578 - 36187693
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| || ||| |||| ||||||||  | ||||||| ||||| ||||||||||||||||||||||||    
T  36187578 ttcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatacgagaatcggatatggggacggggaaggtaaaacccgtccccaccccgccc 36187677  T
Q  121 cattgtcatacctaat 136  Q
    ||||| ||| ||||||    
T  36187678 cattgccatgcctaat 36187693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 5180789 - 5180679
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||| || ||| ||||||||||||| || | ||||| ||||| ||||||| ||||||||||    
T  5180789 atgagattcaatttctcatccccgttggatatgggtagggtaatgggtaagtatatgagaatcgggtatagggacggggaaggtaaaactcgtccccacc 5180690  T
Q  115 ccgccccattg 125  Q
    || ||||||||    
T  5180689 ccaccccattg 5180679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 18354427 - 18354541
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| ||||||||||||| | ||| || ||| |||||||||||||  | | | ||| ||||| ||||||||||||||||||||||||    
T  18354427 ttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcggatatagagacggggaaggtaaaacccgtccccaccccgccc 18354526  T
Q  121 cattgtcatacctaa 135  Q
    ||||| ||| |||||    
T  18354527 cattgccatgcctaa 18354541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 24710596 - 24710476
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||  ||| |||| | ||| |||||| ||||||||||||| || ||| ||| ||||| ||||||||||||||||||    
T  24710596 atgagattcaatttctcatccccgttgagtataggtagggtaacaggtaagtatatgagaatcgggtatggagacggggaaggtaaaacccgtccccacc 24710497  T
Q  115 ccgccccattgtcatacctaa 135  Q
    |||||| |||| ||| |||||    
T  24710496 ccgccctattgccatgcctaa 24710476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 28297665 - 28297551
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||| ||| |||| |||||||  | ||| || ||| ||||||||||||| || ||||||| ||||| |||||||||||||||||||||||     
T  28297665 ttcaatttctcattcccgttgggtatgggtcgggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgcct 28297566  T
Q  121 cattgtcatacctaa 135  Q
    ||||| ||| |||||    
T  28297565 cattgccatgcctaa 28297551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 45866536 - 45866658
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||||| |||||| |||| ||| ||||   ||| || ||| |||||||||||||||| || |||| ||||| ||||||| ||||||||||    
T  45866536 atgagattcaatttcttatccccgttgggtataggtagagtaacgggtaagtatatgagaatcgagtatgaggacggggaaggtaaaacacgtccccacc 45866635  T
Q  115 ccgccccattgtcatacctaatt 137  Q
    ||||||||||| ||| |||||||    
T  45866636 ccgccccattgccatgcctaatt 45866658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 9983236 - 9983357
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    |||||||| ||||| ||||||||  |||||||||||| | ||| |||||| ||| ||||||||| || ||| ||| ||||||||||||| ||| |||| |    
T  9983236 atgaggttaaatttttcatccccgctggatatgggtagggtaacaggtaagtatgtgagaatcgggtatggagacggggaatgtaaaactcgttcccatc 9983335  T
Q  115 ccgccccattgtcatacctaat 136  Q
    ||||||||||| ||| ||||||    
T  9983336 ccgccccattgccatgcctaat 9983357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 49742271 - 49742372
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||||||||||||||||| || ||||||| || | ||| || |||||||||||||||||  | |||| || ||||||| ||||||||||||||||    
T  49742271 atgaggttcaatttctcatccccgttagatatggatagggtaacggataaatatatgagaatcggatatgggaacggggaatgcaaaacccgtccccacc 49742370  T
Q  115 cc 116  Q
    ||    
T  49742371 cc 49742372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 38686391 - 38686272
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||||| |||||| ||||||| ||||| | ||| || ||||||||||||||||  |  ||||||  ||||| || ||| |||||||||||    
T  38686391 atgagattcaatttctgatccccgttggataagggtagggtaacggataaatatatgagaatcagggatggggatggggaaggtgaaatccgtccccacc 38686292  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||||||| ||||    
T  38686291 ccgccccattgtcatgccta 38686272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 29936149 - 29936035
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| ||||||||||||| | ||| || |||  ||||||||||||  | ||  ||| ||||| ||||||| | ||||||||||||||    
T  29936149 ttcaatttctcatccccgttggatatgggtagggtaacgggtaagcatatgagaatcggatatgtagacggggaacgtaaaacacatccccaccccgccc 29936050  T
Q  121 cattgtcatacctaa 135  Q
    ||||||||| |||||    
T  29936049 cattgtcatgcctaa 29936035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 51421633 - 51421523
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||| ||| | ||| || ||| ||||||||||||| || ||||||   |||| |||||| |||||||||||    
T  51421633 atgagattcaatttctcatccccgttggatatgagtagggtaacgggtaagtatatgagaatcgggtatggggatgaggaaggtaaaatccgtccccacc 51421534  T
Q  115 ccgccccattg 125  Q
    || ||||||||    
T  51421533 ccaccccattg 51421523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 23966590 - 23966477
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||  | |||| |||||||| | ||| || ||| |||||||||||||  | ||||||| ||||| ||||||| ||||||||||||||||    
T  23966590 ttcaatttctcatcttcgttgggtatgggtagggtaatgggtaagtatatgagaatcggttatggggacggggaaggtaaaactcgtccccaccccgccc 23966491  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  23966490 cattgccatgccta 23966477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 49251133 - 49251201
Alignment:
Q  66 tatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattgtcataccta 134  Q
    |||||||||||||  | ||||||| ||||| ||||||||||||||||||||||||||||| ||| ||||    
T  49251133 tatatgagaatcggatatggggacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 49251201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 17092310 - 17092429
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||  ||||||||| ||| | ||| || |||  ||||||||||||  | || ||||  |||| ||||||||||||||||||    
T  17092310 atgagattcaatttctcatccctgttggatatgtgtagggtaacgggtaagcatatgagaatcggatatgaggacgaggaaggtaaaacccgtccccacc 17092409  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  17092410 ccgccccattgccatgccta 17092429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 14890805 - 14890751
Alignment:
Q  83 tggggacagggaatgtaaaacccgtccccaccccgccccattgtcatacctaatt 137  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  14890805 tggggacggggaaggtaaaacccgtccccacccagccccattgtcatgcctaatt 14890751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 3628325 - 3628446
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||||| |||||| |||| ||||| || | ||| || ||| |||| |||||||| || ||||||| ||||| ||||||||||| || |||    
T  3628325 atgagattcaatttcttatccccgttgggtatggatagggtaacgggtaagtatacgagaatcgtgtatggggacggggaaggtaaaacccgttcctacc 3628424  T
Q  115 ccgccccattgtcatacctaat 136  Q
    |||||| |||| ||| ||||||    
T  3628425 ccgccctattgccatgcctaat 3628446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 42439991 - 42440104
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| ||||||||||||| | |||  ||||| ||||||||||||  || ||||  | ||||| ||||||| ||||| ||||| ||||    
T  42439991 ttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcaggtatgggagcggggaaggtaaaactcgtccacaccctgccc 42440090  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  42440091 cattgccatgccta 42440104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 10778969 - 10779073
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaaggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgcc 119  Q
    ||||| ||||||||||||| ||| ||||||||| | ||| ||||| |||||   ||| | || |||||| |||||| ||||||| |||||||||||||||    
T  10778969 ggttcgatttctcatccccgttgaatatgggtaaggtaacggtaagtatatagaaatagggtatggggatagggaaggtaaaactcgtccccaccccgcc 10779068  T
Q  120 ccatt 124  Q
     ||||    
T  10779069 tcatt 10779073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 14892399 - 14892322
Alignment:
Q  60 ggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattgtcatacctaatt 137  Q
    ||||| ||||||||||| | || ||||||| ||||| ||||||||||||||||||| | |||| || ||| |||||||    
T  14892399 ggtaagtatatgagaatagggtatggggacggggaaggtaaaacccgtccccacccagtcccaatgccatgcctaatt 14892322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 50427004 - 50427113
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||| | ||| ||||||||| | ||| || ||| ||||||||||||| || ||||||  | ||| ||||||||  ||||||||    
T  50427004 atgagattcaatttctcatcctcgttgaatatgggtagggtaacgggtaagtatatgagaatcgggtatggggatggagaaggtaaaacctatccccacc 50427103  T
Q  115 ccgccccatt 124  Q
    ||||| ||||    
T  50427104 ccgcctcatt 50427113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 16433511 - 16433631
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    |||||||||||||||||||| || |||||||||| || | |||  ||||| |||| ||||||||  | | ||||| |||||  |||||| |||||| | |    
T  16433511 atgaggttcaatttctcatctccgttggatatggataaggtaacgggtaagtataagagaatcggatatagggacggggaagataaaactcgtccctatc 16433610  T
Q  115 ccgccccattgtcatacctaa 135  Q
    || |||||||||||| |||||    
T  16433611 ccaccccattgtcatgcctaa 16433631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 37743181 - 37743217
Alignment:
Q  98 taaaacccgtccccaccccgccccattgtcataccta 134  Q
    |||||| ||||||||||||||||||||||||||||||    
T  37743181 taaaactcgtccccaccccgccccattgtcataccta 37743217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 24237111 - 24237206
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaag-gtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccc 110  Q
    ||||| ||||||||||||||||| |||| |||||||  | ||| | |||| ||||||||||||| || |||||||  |||| |||||| |||||||    
T  24237111 atgagattcaatttctcatccccgttgggtatgggtggggtaacgagtaagtatatgagaatcgggtatggggacgaggaaggtaaaatccgtccc 24237206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 32594634 - 32594515
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | |||  ||||| ||||| | |||||  | |||| || | ||| |||| || ||||||||||    
T  32594634 atgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatataaaaatcggatatgggtacggagaaggtaatactcgtccccacc 32594535  T
Q  115 ccgccccattgtcataccta 134  Q
    || |||||||||||| ||||    
T  32594534 ccaccccattgtcatgccta 32594515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 17134610 - 17134560
Alignment:
Q  84 ggggacagggaatgtaaaacccgtccccaccccgccccattgtcataccta 134  Q
    |||||||||||| | |||||||| |||||||||||||||||| ||| ||||    
T  17134610 ggggacagggaaggcaaaacccgcccccaccccgccccattgccatgccta 17134560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 2514394 - 2514358
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggta 52  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  2514394 atgaggttcaatttctcatccccgttggatataggta 2514358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 16903232 - 16903132
Alignment:
Q  26 atttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccatt 124  Q
    |||||||||||||  |||||||||||| | ||| || |||||| ||| || | | || ||||||  ||||| |||| || ||||||||||||||||||||    
T  16903232 atttctcatccccgatggatatgggtagggtaacggataaataaatgggagtagggtatggggatggggaaggtaatactcgtccccaccccgccccatt 16903133  T
Q  125 g 125  Q
    |    
T  16903132 g 16903132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 4e-30; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 6482376 - 6482503
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||||||||||||||||| ||||||||||||| | ||| || ||| ||||||||||||| || |||| || ||||||||||||||||||||||||    
T  6482376 atgaggttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatgggaacggggaatgtaaaacccgtccccacc 6482475  T
Q  115 ccgccccattgtcatacctaattgcaga 142  Q
    ||||||||||  ||| ||||||| ||||    
T  6482476 ccgccccattaccatgcctaattccaga 6482503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 7608708 - 7608595
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| ||||||||||||| | ||| |||||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||    
T  7608708 ttcaatttctcatccccgttggatatgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccc 7608609  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  7608608 cattgccatgccta 7608595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 1724661 - 1724780
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||||||||||||||||| |||| |||||||| | ||| || ||||||||||||||||| || | ||||| ||||||| ||||||||||||||||    
T  1724661 atgaggttcaatttctcatccccgttgggtatgggtagggtaacggataaatatatgagaatcgggtattgggacggggaatgcaaaacccgtccccacc 1724760  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  1724761 ccgccccattgccatgccta 1724780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 15987580 - 15987699
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||| |||||||  |||| ||||||| ||||||||||    
T  15987580 atgagattcaatttctcatccccgttggatatgggtagggtaacaggtaagtatatgagaatcgagtatggggacgaggaaggtaaaactcgtccccacc 15987679  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  15987680 ccgccccattgccatgccta 15987699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 55826974 - 55827093
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||||||||||||||||| | ||| || ||| ||||||||||||  || ||||||| ||||| ||||||||||||||||||    
T  55826974 atgagattcaatttctcatccccattggatatgggtagggtaacagataagtatatgagaatccggtatggggacggggaaggtaaaacccgtccccacc 55827073  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  55827074 ccgccccattgccatgccta 55827093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 44887650 - 44887529
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||||||||||||||||||||||| || | ||| |||||| ||||||||||||| || || |||||||||| |||||| || ||||||||    
T  44887650 atgagattcaatttctcatccccattggatatggatagggtaacaggtaagtatatgagaatcgggtatgaggacagggaaggtaaaatccatccccacc 44887551  T
Q  115 ccgccccattgtcatacctaat 136  Q
    ||||||||||| ||| ||||||    
T  44887550 ccgccccattgccatgcctaat 44887529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 37348867 - 37348753
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    |||| |||||||||||||||||| |||| |||||||| | ||| |||||| |||| |||||||| || ||||||| | |||||||||||||||||| |||    
T  37348867 atgaagttcaatttctcatccccgttgggtatgggtagggtaacaggtaagtataagagaatcgggtatggggacggagaatgtaaaacccgtccctacc 37348768  T
Q  115 ccgccccattgtcat 129  Q
    |||||||||||||||    
T  37348767 ccgccccattgtcat 37348753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 31918917 - 31919029
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| ||||| || | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||    
T  31918917 ttcaatttctcatccccgttgggtatggatagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccc 31919016  T
Q  121 cattgtcatacct 133  Q
    ||||| |||||||    
T  31919017 cattgccatacct 31919029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 6382625 - 6382744
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||| || ||| ||||||||||||| || ||||| | ||||| |||||||| |||||||||    
T  6382625 atgagattcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatgggggcggggaaggtaaaaccggtccccacc 6382724  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  6382725 ccgccccattgccatgccta 6382744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 11123224 - 11123339
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    |||||||| ||||| || ||||||||||||| | ||| |||||| ||||||||||||| || |||| || ||||| ||||||||||||||||||||||||    
T  11123224 ttcaatttatcatctccgttggatatgggtagggtaacaggtaagtatatgagaatcgggtatgggaacggggaaggtaaaacccgtccccaccccgccc 11123323  T
Q  121 cattgtcatacctaat 136  Q
    ||||| ||| ||||||    
T  11123324 cattgccatgcctaat 11123339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 26564575 - 26564456
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||| | ||||||||||||| | ||| |||||| ||||||||||||  || || |||| || |||||||||||||||||||||    
T  26564575 atgagattcaatttctcatcctcgttggatatgggtagggtaacaggtaagtatatgagaatcaggtatgaggacgggaaatgtaaaacccgtccccacc 26564476  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  26564475 ccgccccattgccatgccta 26564456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 5902971 - 5903088
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||| | ||||||||||||| | ||| || ||| ||||||||||||| || ||||||  ||||| ||||||||||||||||||||||||    
T  5902971 ttcaatttctcatcctcgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatggggatggggaaggtaaaacccgtccccaccccgccc 5903070  T
Q  121 cattgtcatacctaattg 138  Q
     |||| ||| ||||||||    
T  5903071 aattgccatgcctaattg 5903088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 47550702 - 47550823
Alignment:
Q  14 gaatgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtcccca 112  Q
    ||||||| ||||||||||||||||| |||| ||||| || | ||| || ||| |||| |||||||| || ||||||| ||||| ||||||||||||||||    
T  47550702 gaatgagattcaatttctcatccccgttgggtatggatagggtaacgggtaagtatacgagaatcgggtatggggacggggaaggtaaaacccgtcccca 47550801  T
Q  113 ccccgccccattgtcataccta 134  Q
    ||||||||||||| ||| ||||    
T  47550802 ccccgccccattgccatgccta 47550823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 39046695 - 39046587
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaag-gtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||||||| |||| ||||| | |||| ||||| ||||||| || ||||||| || || ||||||||||||||||||||| ||    
T  39046695 ttcaatttctcatccccgttggatataggtaggataacgagtaagtatataagaatcgggtatggggacgggaaaggtaaaacccgtccccaccccgtcc 39046596  T
Q  121 cattgtcat 129  Q
    |||||||||    
T  39046595 cattgtcat 39046587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 11027816 - 11027697
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaag-gtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| | || |||||||| | ||| | |||| ||||||||||||  || || |||| ||||| ||||||||||||||||||    
T  11027816 atgagattcaatttctcatccccgtagggtatgggtagggtaacgagtaagtatatgagaatcaggtatgaggacggggaaggtaaaacccgtccccacc 11027717  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  11027716 ccgccccattgccatgccta 11027697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 19534195 - 19534085
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaag-gtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||| ||||||| ||||||||||||| | ||| | |||| ||||||||||||| || |||| || ||| ||||||||| | |||||||||| |    
T  19534195 ggttcaatttcgcatccccgttggatatgggtagggtaatgagtaagtatatgagaatcgggtatgggaacggggtatgtaaaacacatccccaccccac 19534096  T
Q  119 cccattgtcat 129  Q
    |||||||||||    
T  19534095 cccattgtcat 19534085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 29755682 - 29755792
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    |||||||||||||||| |||| |||||| ||||||||   ||| || ||| | ||||||||||| || ||||||| |||||||||||||| |||||||||    
T  29755682 atgaggttcaatttcttatcctcattgggtatgggtaaagtaacgggtaagtgtatgagaatcgggtatggggacggggaatgtaaaacctgtccccacc 29755781  T
Q  115 ccgccccattg 125  Q
    | |||||||||    
T  29755782 ctgccccattg 29755792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 16217025 - 16217138
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| || ||| |||||||||||||  | ||||||| ||||| ||||||||| ||| ||||||||||    
T  16217025 ttcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcggatatggggacggggaaggtaaaacccttccgcaccccgccc 16217124  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  16217125 cattgccatgccta 16217138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 4766666 - 4766786
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||||||||| || |||| ||||| || | ||| |||||| |||||||||||||  | ||||||| ||||| ||||||| ||||||||||    
T  4766666 atgagattcaatttctcatctccgttgggtatggatagggtaacaggtaagtatatgagaatcggatatggggacggggaaggtaaaacacgtccccacc 4766765  T
Q  115 ccgccccattgtcatacctaa 135  Q
    ||||| ||||| ||| |||||    
T  4766766 ccgcctcattgccatgcctaa 4766786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 39375079 - 39374965
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||||||| |||| | ||| || ||| ||||||||||||   | ||  ||| |||||||||||||||||||||||||||||     
T  39375079 ttcaatttctcatccccgttggatatcggtagggtaacgggtaagtatatgagaatcagatatgaagac-gggaatgtaaaacccgtccccaccccgcct 39374981  T
Q  121 cattgtcatacctaat 136  Q
    ||||||||| ||||||    
T  39374980 cattgtcatgcctaat 39374965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 42774505 - 42774386
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| || ||||||||||||||||||| |||||||| ||||| |  ||| ||||||||||| |  | |||||||  |||| |||||||||||||| |||    
T  42774505 atgagattgaatttctcatccccattgggtatgggtaggataacatataagtatatgagaattggatatggggacgtggaaggtaaaacccgtccctacc 42774406  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  42774405 ccgccccattgccatgccta 42774386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 43892255 - 43892136
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||||||| | |||  ||||| ||||||||||| | || ||| ||| ||||| |||||| ||||||||| |    
T  43892255 atgagattcaatttctcatccccgttggatatgggtaaggtaatgggtaagtatatgagaattgggtatggagacggggaaggtaaaatccgtccccatc 43892156  T
Q  115 ccgccccattgtcataccta 134  Q
    ||| ||||||| ||| ||||    
T  43892155 ccgtcccattgccatgccta 43892136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 44317282 - 44317187
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacccc 116  Q
    ||||||||||||||||| |||  |||||||| | ||| |||||| ||||||||||||| || ||||||| ||||| ||||||||||||||| ||||    
T  44317282 ttcaatttctcatccccgttgagtatgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccccccc 44317187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 42299572 - 42299464
Alignment:
Q  14 gaatgaggttcaatttctcatccccattggatatgggtatgataaag-gtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtcccca 112  Q
    ||||||| ||||||||||||||||| || | |||||||| | ||| | |||| ||||||||||||| || ||||||| ||||||||||||| ||| |||     
T  42299572 gaatgagattcaatttctcatccccgtttggtatgggtagggtaacgagtaagtatatgagaatcgggtatggggacggggaatgtaaaactcgttcccc 42299473  T
Q  113 ccccgcccc 121  Q
    |||| ||||    
T  42299472 ccccccccc 42299464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 9230022 - 9229919
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaaggtaaa-tatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||| ||||||||| ||| | ||| ||  || |||||| |||||| || ||||||| |||||| |||||| ||||| ||||||||    
T  9230022 ggttcaatttctcatccccgttggatatgagtagggtaacgggcaagtatatgtgaatcgggtatggggacggggaatataaaactcgtcctcaccccgc 9229923  T
Q  119 ccca 122  Q
    ||||    
T  9229922 ccca 9229919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 48459230 - 48459111
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||  |||| ||| | ||| || ||| ||||||||||||| || ||||||  | ||| ||||||||||||||||||    
T  48459230 atgagattcaatttctcatccccgttgagtatgagtagggtaacgggtaagtatatgagaatcgggtatggggatggagaaggtaaaacccgtccccacc 48459131  T
Q  115 ccgccccattgtcataccta 134  Q
    ||  ||||||||||| ||||    
T  48459130 ccttcccattgtcatgccta 48459111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 21423560 - 21423486
Alignment:
Q  60 ggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattgtcataccta 134  Q
    ||||| ||||||||||||| || |||||||  | ||||||||||| |||||||||||||||||||| ||| ||||    
T  21423560 ggtaagtatatgagaatcgggtatggggacgagaaatgtaaaacctgtccccaccccgccccattgccatgccta 21423486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 3737537 - 3737422
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||| ||||||||||| | || | |||||||| | ||| || |||||||||||||||   || ||||||  | ||| ||||||||||||||||||||||    
T  3737537 ggttcgatttctcatcctcgttaggtatgggtagggtaacgggtaaatatatgagaatatggtatggggatggagaaggtaaaacccgtccccaccccgc 3737438  T
Q  119 cccattgtcataccta 134  Q
    ||||||| ||| ||||    
T  3737437 cccattgccatgccta 3737422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 10287002 - 10286906
Alignment:
Q  26 atttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgcccc 121  Q
    ||||||||||||| |||| ||||| || | ||| || ||| ||||| ||||| | || ||||||| ||| | |||||||||||||||||||||||||    
T  10287002 atttctcatccccgttgggtatggatagggtaacgggtaagtatattagaatagggtatggggacgggggaggtaaaacccgtccccaccccgcccc 10286906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 12825881 - 12825929
Alignment:
Q  86 ggacagggaatgtaaaacccgtccccaccccgccccattgtcataccta 134  Q
    |||| ||||||||||||||||||| ||| ||||||||||| ||||||||    
T  12825881 ggacggggaatgtaaaacccgtcctcactccgccccattgccataccta 12825929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 24636994 - 24636955
Alignment:
Q  99 aaaacccgtccccaccccgccccattgtcatacctaattg 138  Q
    |||||||||||||||| |||||||||||||| ||||||||    
T  24636994 aaaacccgtccccacctcgccccattgtcatgcctaattg 24636955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 36918803 - 36918705
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgcc 119  Q
    |||||||||||||||||  |||||||||  | | ||| |||||| ||||||||| | | || ||||||| ||||| ||||||| | |||||||||||||    
T  36918803 ttcaatttctcatccccgctggatatggacagggtaacaggtaagtatatgagagtagggtatggggacggggaaggtaaaactcatccccaccccgcc 36918705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 47239736 - 47239822
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaa 101  Q
    ||||| ||||||||||||||||| || ||||||| || | ||| || |||||||||||||||||  | ||||||| ||||| |||||    
T  47239736 atgagattcaatttctcatccccgtttgatatggatagggtaacggataaatatatgagaatcggatatggggacggggaaggtaaa 47239822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 13770859 - 13770928
Alignment:
Q  60 ggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattgtcat 129  Q
    ||||| ||||| ||||||| || | ||||| |||||||||||| ||||||||||||   |||||||||||    
T  13770859 ggtaagtatataagaatcgggtatagggacggggaatgtaaaatccgtccccaccctaacccattgtcat 13770928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 25265603 - 25265672
Alignment:
Q  60 ggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattgtcat 129  Q
    ||||| |||||| || | |||| ||||||||||||| ||||| |  ||||||| ||||||||||||||||    
T  25265603 ggtaagtatatgggagtagagtatggggacagggaaggtaaaccttgtccccatcccgccccattgtcat 25265672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 30034311 - 30034259
Alignment:
Q  83 tggggacagggaatgtaaaacccgtccccaccccgccccattgtcatacctaa 135  Q
    |||||||  |||| |||||||||||||||||||||| | |||||||| |||||    
T  30034311 tggggacgtggaaggtaaaacccgtccccaccccgctcgattgtcatgcctaa 30034259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 31752239 - 31752175
Alignment:
Q  60 ggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccatt 124  Q
    ||||| ||||||||||||| || |||||||  |||| ||||||||| |||||| ||| |||||||    
T  31752239 ggtaagtatatgagaatcgggtatggggacgaggaaggtaaaacccatccccatcccaccccatt 31752175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 35304940 - 35304976
Alignment:
Q  98 taaaacccgtccccaccccgccccattgtcataccta 134  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  35304940 taaaacacgtccccaccccgccccattgtcatgccta 35304976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 9e-28; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 34776200 - 34776081
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||| |||||||||||||||||||| || ||| ||  ||||| |||||||||||||||| |    
T  34776200 atgagattcaatttctcatccccgttggatatgggtaggttaacaggtaaatatatgagaatcgggtatggagatggggaaggtaaaacccgtccccatc 34776101  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||||||||    
T  34776100 ccgccccattgccataccta 34776081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 5858807 - 5858926
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||||||||||||||||| ||| ||||||||| | ||| || ||| ||||||||||||  || ||||||| |||||||||||||| |||||||||    
T  5858807 atgaggttcaatttctcatccccgttgaatatgggtaaggtaacgggtaagtatatgagaatcaggtatggggacggggaatgtaaaacctgtccccacc 5858906  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  5858907 ccgccccattgccatgccta 5858926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 9642721 - 9642836
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||| ||||||||||||||||||||||||||| ||||| || ||| ||||||||||| |||| ||||||  ||||| |||||||||||||||||||| |    
T  9642721 ggttcgatttctcatccccattggatatgggtaggataacgggtaagtatatgagaatagagtatggggatggggaaggtaaaacccgtccccaccccac 9642820  T
Q  119 cccattgtcataccta 134  Q
    ||||||| ||| ||||    
T  9642821 cccattgccatgccta 9642836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 24568673 - 24568567
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||| ||||||||||||| | ||| || ||||||| ||||||||| || ||||||| || |||| ||||||||||||||||||||    
T  24568673 ggttcaatttctcatccccgttggatatgggtagggtaacggataaatatgtgagaatcgggtatggggaccggaaatgcaaaacccgtccccaccccgc 24568574  T
Q  119 cccattg 125  Q
    |||||||    
T  24568573 cccattg 24568567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 32302792 - 32302676
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||| | |||| |||||||| | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||    
T  32302792 ttcaatttctcatcctcgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccc 32302693  T
Q  121 cattgtcatacctaatt 137  Q
    ||||| ||| |||||||    
T  32302692 cattgccatgcctaatt 32302676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 2076186 - 2076305
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||    
T  2076186 atgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacc 2076285  T
Q  115 ccgccccattgtcataccta 134  Q
     |||||||||| ||| ||||    
T  2076286 gcgccccattgccatgccta 2076305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 29109168 - 29109278
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||| |||||| | |||||||| | ||| || |||||||||||||||||||| |||| || ||||| |||||| |||||||||||    
T  29109168 atgagattcaatttctcatacccattaggtatgggtagggtaacgggtaaatatatgagaatcgagtatgggaacggggaaggtaaaatccgtccccacc 29109267  T
Q  115 ccgccccattg 125  Q
    |||||||||||    
T  29109268 ccgccccattg 29109278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 24927681 - 24927568
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||||| ||    
T  24927681 ttcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgtcc 24927582  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  24927581 cattgccatgccta 24927568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 28977470 - 28977583
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| |||||| ||||| ||||||| || |||||||||||||  |||||| ||||||||||||||||    
T  28977470 ttcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatataagaatcgggtatggggacagggaagataaaacacgtccccaccccgccc 28977569  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  28977570 cattgccatgccta 28977583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 34301510 - 34301623
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| |||||| ||||||| ||||| || ||||||  ||||| ||||||||||||||||||||||||    
T  34301510 ttcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatgataatcgggtatggggatggggaaggtaaaacccgtccccaccccgccc 34301609  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  34301610 cattgccatgccta 34301623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 17468994 - 17468874
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    |||| ||||||||| |||||||| ||| ||||||||| | ||| || ||| ||||||||||||| || ||||||| ||||||||||||| ||||| ||||    
T  17468994 atgaagttcaatttatcatccccgttgaatatgggtagggtaacggataagtatatgagaatcgggtatggggacggggaatgtaaaactcgtcctcacc 17468895  T
Q  115 ccgccccattgtcatacctaa 135  Q
    ||||||||||| ||| |||||    
T  17468894 ccgccccattgccatgcctaa 17468874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 20399370 - 20399255
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||  |||| |||||||| | ||| |||||| ||||||||||| | || |||||||  |||||||||||||| ||||||||||||    
T  20399370 ggttcaatttctcatccctgttgggtatgggtaaggtaataggtaagtatatgagaattgggtatggggacgaggaatgtaaaacccttccccaccccgc 20399271  T
Q  119 cccattgtcataccta 134  Q
    ||||||| ||| ||||    
T  20399270 cccattgccatgccta 20399255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 27058680 - 27058799
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||| |||||||| |||| ||||||||||||| | ||| || ||| ||||||||||| |||| ||||||| ||| | ||||||||||||||||||    
T  27058680 atgagattctatttctcacccccgttggatatgggtagggtaacgggtaagtatatgagaatagagtatggggacgggggaggtaaaacccgtccccacc 27058779  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  27058780 ccgccccattgccatgccta 27058799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 17220449 - 17220336
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||  |||||||||| || | ||| || ||| ||||||||||||| || ||||||| | ||| ||||||||||||||||||||||||    
T  17220449 ttcaatttctcatccctgttggatatggatagggtaacgggtaagtatatgagaatcgggtatggggacggagaaggtaaaacccgtccccaccccgccc 17220350  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  17220349 cattgccatgccta 17220336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 27932167 - 27932063
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    |||||||||||||||| |||||||||||||| | ||| || ||| ||||||||||||| || |||||||  |||| |||||| || ||||||||||||||    
T  27932167 ttcaatttctcatccctattggatatgggtagggtaacgggtaagtatatgagaatcgcgtatggggacgaggaaggtaaaatccatccccaccccgccc 27932068  T
Q  121 cattg 125  Q
    |||||    
T  27932067 cattg 27932063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 6388915 - 6389038
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtcccca-c 113  Q
    ||||| ||| |||||||||||||  |||||||||||| | ||| |||||| ||||||||| | |||| ||||||| ||||| |||||||||||||||| |    
T  6388915 atgagattcgatttctcatccccgctggatatgggtagggtaacaggtaagtatatgagagtagagtatggggacggggaaggtaaaacccgtccccacc 6389014  T
Q  114 cccgccccattgtcatacctaatt 137  Q
    |||||| ||||| ||| |||||||    
T  6389015 cccgcctcattgccatgcctaatt 6389038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 14186078 - 14185963
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||| || | |||| ||| | ||| || ||| ||||||||||| | || ||||||| ||||||||||||| ||||||||||||||    
T  14186078 ggttcaatttctcatccccgttaggtatgtgtagggtaacgggtaagtatatgagaattgggtatggggacggggaatgtaaaactcgtccccaccccgc 14185979  T
Q  119 cccattgtcataccta 134  Q
    ||||||| ||| ||||    
T  14185978 cccattgccatgccta 14185963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 4231069 - 4231189
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||| | |||||| |||| |||||||| | ||| || ||| ||||||||||||| || ||||||| | ||| ||||||||||||||||||    
T  4231069 atgagattcaatttattatccccgttgggtatgggtagggtaacggataattatatgagaatcgggtatggggacggagaaggtaaaacccgtccccacc 4231168  T
Q  115 ccgccccattgtcatacctaa 135  Q
    || |||||||| ||| |||||    
T  4231169 ccaccccattgccatgcctaa 4231189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 40248692 - 40248811
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||| | ||||||||||||| ||||| || ||| |||||||||||||  | || |||| |  || ||||||||||||||||||    
T  40248692 atgagattcaatttctcatcctcgttggatatgggtaggataacggataagtatatgagaatcggatatgaggacggaaaaggtaaaacccgtccccacc 40248791  T
Q  115 ccgccccattgtcataccta 134  Q
    | ||||||||| ||| ||||    
T  40248792 ctgccccattgccatgccta 40248811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 1012367 - 1012258
Alignment:
Q  17 tgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccc 115  Q
    |||||||||||||||||||||  |||| |||||||| | ||| |||||| |||||||||||||  | || |||| || |||||||||| |||||||||||    
T  1012367 tgaggttcaatttctcatcccg-ttgggtatgggtaaggtaacaggtaagtatatgagaatcggatatgaggacgggaaatgtaaaactcgtccccaccc 1012269  T
Q  116 cgccccattgt 126  Q
    | |||||||||    
T  1012268 caccccattgt 1012258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 39445912 - 39446026
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||| |||| | |||||||| | ||| || ||| ||||||||||||  || ||||||| | ||| ||||||| ||||||||||    
T  39445912 atgagattcaatttctcatcctcattaggtatgggtagggtaacgggtaagtatatgagaatcaggtatggggacggagaaggtaaaactcgtccccacc 39446011  T
Q  115 ccgccccattgtcat 129  Q
    |||||||||| ||||    
T  39446012 ccgccccattatcat 39446026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 45235802 - 45235688
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    |||||| |||||| ||| ||||||||| ||| | ||| || ||| || ||||||||||  | ||||||| ||||| ||||||||||||||||||||||||    
T  45235802 ttcaatatctcattcccgttggatatgagtagggtaacgggtaagtacatgagaatcggatatggggacggggaaggtaaaacccgtccccaccccgccc 45235703  T
Q  121 cattgtcatacctaa 135  Q
    ||||| ||| |||||    
T  45235702 cattgccatgcctaa 45235688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 24870373 - 24870492
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||||||||| || ||||||   ||||  ||||||||| |||||||    
T  24870373 atgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggatgaggaagataaaacccgcccccacc 24870472  T
Q  115 ccgccccattgtcataccta 134  Q
    | ||||||||| ||| ||||    
T  24870473 ctgccccattgccatgccta 24870492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 18151193 - 18151083
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||| |||||| ||||||| | ||||||| || | ||| |||||| ||||||||| | | || ||||||||||||| ||||||  ||||||||||    
T  18151193 atgaggttcgatttctaatccccactagatatggataggctaacaggtaagtatatgagagtagggtatggggacagggaaggtaaaattcgtccccacc 18151094  T
Q  115 ccgccccattg 125  Q
    || ||||||||    
T  18151093 ccaccccattg 18151083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 11255355 - 11255476
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||  ||||| || | ||| || ||| |||||||||||   || ||| ||| ||||| ||||||| ||||||||||    
T  11255355 atgagattcaatttctcatccccgttgagtatggatagggtaacggataagtatatgagaattatgtatggagacggggaaggtaaaacacgtccccacc 11255454  T
Q  115 ccgccccattgtcatacctaat 136  Q
    || |||||||||||| ||||||    
T  11255455 ccaccccattgtcatgcctaat 11255476  T

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Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 35215220 - 35215111
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaaggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccc 115  Q
    |||| ||||||||||||||||||||||| |||||||| | ||   |||| |||||||||||||  | || | || | ||||| ||||||||||| |||||    
T  35215220 atgatgttcaatttctcatccccattgggtatgggtagggtatcagtaagtatatgagaatcggatatgtgaacggagaatgcaaaacccgtcctcaccc 35215121  T
Q  116 cgccccattg 125  Q
     |||||||||    
T  35215120 tgccccattg 35215111  T

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Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 17084530 - 17084629
Alignment:
Q  26 atttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccatt 124  Q
    |||||||||||||| ||| |||||||  | ||| | ||||||| |||||| | | || ||||||  ||||| ||||||||||||||||||||||||||||    
T  17084530 atttctcatccccaatgggtatgggttgggtaacatgtaaataaatgagagtagggtatggggatggggaaggtaaaacccgtccccaccccgccccatt 17084629  T

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Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 1063247 - 1063162
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaa 100  Q
    ||||| ||||||||||||||||| |||| ||| |||| | ||| || ||| ||||||||||||| || ||||||||||||| ||||    
T  1063247 atgagattcaatttctcatccccgttgggtataggtagggtaacgggtaagtatatgagaatcgggtatggggacagggaaggtaa 1063162  T

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Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 34139182 - 34139064
Alignment:
Q  17 tgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccc 115  Q
    |||||||||||||||||||||  |||  ||||| || ||||| || ||| ||||||||||||  || ||||||    |||||||||| ||||||||||||    
T  34139182 tgaggttcaatttctcatcccg-ttgagtatggttaggataacagataagtatatgagaatcatgtatggggatgaagaatgtaaaatccgtccccaccc 34139084  T
Q  116 cgccccattgtcatacctaa 135  Q
    ||||  |||||||| |||||    
T  34139083 cgcctaattgtcatgcctaa 34139064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 31323562 - 31323497
Alignment:
Q  60 ggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattg 125  Q
    ||||| ||||||||||||| || || | || ||||| |||||| ||||||||||||||| ||||||    
T  31323562 ggtaagtatatgagaatcgggtatgagaacggggaaggtaaaatccgtccccaccccgctccattg 31323497  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 2190232 - 2190268
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggta 52  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  2190232 atgagattcaatttctcatccccgttggatatgggta 2190268  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 34021214 - 34021182
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatg 48  Q
    ||||||||||||||||||||||| |||||||||    
T  34021214 atgaggttcaatttctcatccccgttggatatg 34021182  T

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Target: chr3 (Bit Score: 64; Significance: 9e-28; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 4016383 - 4016502
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||||||||||||||||  ||||||||||||| | ||| || ||||||||| ||||||  || ||||||| ||||||| ||||||||||||||||    
T  4016383 atgaggttcaatttctcatccctgttggatatgggtagggtaacggataaatatataagaatctggtatggggacggggaatgcaaaacccgtccccacc 4016482  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||||||| ||||    
T  4016483 ccgccccattgtcatgccta 4016502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 41937403 - 41937520
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    |||||||||||||||| || ||||||||| ||| | ||| |||||||||||||||||||| || ||| ||| |||||||||||||||||||||||||| |    
T  41937403 ggttcaatttctcatctccgttggatatgagtagggtaacaggtaaatatatgagaatcgggtatggagacggggaatgtaaaacccgtccccaccccac 41937502  T
Q  119 cccattgtcatacctaat 136  Q
    ||||||| ||| ||||||    
T  41937503 cccattgccatgcctaat 41937520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 39728420 - 39728301
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | ||| |||||| ||||||||||||| || ||||||| ||||| ||||||| ||||||||||    
T  39728420 atgagattcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaactcgtccccacc 39728321  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  39728320 ccgccccattgccatgccta 39728301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 44639013 - 44638890
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||| ||| |||| |||||||| | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||    
T  44639013 atgagattcaatttctcattcccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacc 44638914  T
Q  115 ccgccccattgtcatacctaattg 138  Q
    ||||| ||||||||| ||||||||    
T  44638913 ccgccacattgtcatgcctaattg 44638890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 7470128 - 7470248
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||    
T  7470128 atgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggac-gggaaggtaaaacccgtccccacc 7470226  T
Q  115 ccgccccattgtcatacctaat 136  Q
    ||||||||||| ||| ||||||    
T  7470227 ccgccccattgccatgcctaat 7470248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 42758134 - 42758017
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||| ||||||||||||| | ||| || ||| ||||||||||||| || |||  |  |||||||||||||||||||||||| |||    
T  42758134 ggttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatggaaatggggaatgtaaaacccgtccccacctcgc 42758035  T
Q  119 cccattgtcatacctaat 136  Q
    ||||||||||| ||||||    
T  42758034 cccattgtcatgcctaat 42758017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 6738728 - 6738841
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||||||||| || |||| || ||||| ||||||||||||||||||||||||    
T  6738728 ttcaatttctcatccccgttgggtatgggtagggtaatgggtaagtatatgagaatcgggtatgggaacggggaaggtaaaacccgtccccaccccgccc 6738827  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  6738828 cattgccatgccta 6738841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 23547334 - 23547447
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||||||||| || ||||||| |||||  |||||||||||||||||||||||    
T  23547334 ttcaatttctcatccccgttgggtatgggtagggtaacggataagtatatgagaatcgggtatggggacggggaagataaaacccgtccccaccccgccc 23547433  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  23547434 cattgccatgccta 23547447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 34154154 - 34154033
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| | || |||||||| | ||| || ||| |||||| |||||| ||  |||||| ||||| ||||||||||||||||||    
T  34154154 atgagattcaatttctcatccccgtggggtatgggtagggtaacgggtaagtatatgtgaatcgggtacggggacggggaaggtaaaacccgtccccacc 34154055  T
Q  115 ccgccccattgtcatacctaat 136  Q
    ||||||||||||||| ||||||    
T  34154054 ccgccccattgtcatgcctaat 34154033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 4557655 - 4557779
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||||||||||||||||| | || ||||| || | ||| || ||||||||||||||||| || ||||||  ||||||| |||||| ||||||||     
T  4557655 atgaggttcaatttctcatccccgtcgggtatggatagggtaacgggtaaatatatgagaatcgggtatggggatggggaatgcaaaacctgtccccact 4557754  T
Q  115 ccgccccattgtcatacctaattgc 139  Q
    |||||||||||| || |||||||||    
T  4557755 ccgccccattgttatgcctaattgc 4557779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 31127149 - 31127248
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||| ||| ||||||||||||| | ||| || ||| ||||||||||||| || ||||||| ||||||||||||| | ||||||||||||    
T  31127149 ggttcaatttctcattcccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaatgtaaaactcatccccaccccgc 31127248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 39655619 - 39655734
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||  |||| |||||||| | ||| || ||| ||||||||||||  || ||||||| ||||| |||||| |||||||||||||||||    
T  39655619 ttcaatttctcatccctgttgggtatgggtagggtaatgggtaagtatatgagaatcatgtatggggacggggaaggtaaaaaccgtccccaccccgccc 39655718  T
Q  121 cattgtcatacctaat 136  Q
    ||||| ||| ||||||    
T  39655719 cattgccatgcctaat 39655734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 44107149 - 44107268
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||||||||| || || |||| ||||| ||||||| ||||||||||    
T  44107149 atgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatgaggacggggaaggtaaaactcgtccccacc 44107248  T
Q  115 ccgccccattgtcataccta 134  Q
    |||| |||||| ||| ||||    
T  44107249 ccgctccattgccatgccta 44107268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 44162477 - 44162400
Alignment:
Q  60 ggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattgtcatacctaatt 137  Q
    ||||| ||||||||||||| || ||||||| ||||| ||||||| ||||||||||||||||||||| ||| |||||||    
T  44162477 ggtaagtatatgagaatcgggtatggggacggggaaggtaaaactcgtccccaccccgccccattgccatgcctaatt 44162400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 44252473 - 44252360
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||||||||| || ||||||| || || ||||||| ||||||||||| ||||    
T  44252473 ttcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacgggaaaggtaaaactcgtccccaccctgccc 44252374  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  44252373 cattgccatgccta 44252360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 48306884 - 48307011
Alignment:
Q  14 gaatgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtcccca 112  Q
    ||||||| ||||||||||||| ||| ||||||||| ||| | ||| || ||||||||| |||||||  | ||| ||| ||||| ||||||||||||||||    
T  48306884 gaatgagattcaatttctcattcccgttggatatgagtagggtaatgggtaaatatataagaatcggatatggagacggggaaggtaaaacccgtcccca 48306983  T
Q  113 ccccgccccattgtcatacctaattgca 140  Q
    || | |||||||| ||| ||||| ||||    
T  48306984 ccacaccccattgccatgcctaactgca 48307011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 54316877 - 54316786
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaag-gtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccc 110  Q
    |||||||||||||||||||||| ||||||| || | ||| | |||||||||||||||||| || ||||||  | ||||||||||||||||||    
T  54316877 ggttcaatttctcatccccattcgatatggatagggtaacgtgtaaatatatgagaatcgggtatggggatggagaatgtaaaacccgtccc 54316786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 55439033 - 55439139
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||| ||||||||||| ||||||||||||| | ||| || ||| |||||||||||||  | |||||||  ||||||||||||||||  ||||| |||    
T  55439033 ggttcaacttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcggatatggggacgaggaatgtaaaacccgtatccacctcgc 55439132  T
Q  119 cccattg 125  Q
    |||||||    
T  55439133 cccattg 55439139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 49025414 - 49025325
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccc 110  Q
    ||||||||||||||||| ||||||||||||| | ||| || ||| ||||||||||||| || || |||| ||||| ||||||||||||||    
T  49025414 ttcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatgaggacggggaaggtaaaacccgtccc 49025325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 49579796 - 49579683
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| || |||||| ||| | ||| || ||| || |||||||||  || ||||||| ||||| ||||||||||||||||| ||||||    
T  49579796 ttcaatttctcatccccgttagatatgagtagggtaacgggtaagtacatgagaatcaggtatggggacggggaaggtaaaacccgtccccactccgccc 49579697  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  49579696 cattgccatgccta 49579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 16841618 - 16841726
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| ||||||||||||    ||| |||||| ||||||||||||| || | ||||| || ||||||||||  |||||||||| ||||    
T  16841618 ttcaatttctcatccccgttggatatgggtggagtaacaggtaagtatatgagaatcgggtattgggacgggaaatgtaaaacatgtccccaccctgccc 16841717  T
Q  121 cattgtcat 129  Q
     ||||||||    
T  16841718 aattgtcat 16841726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 23580559 - 23580465
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacccc 116  Q
    ||||||||||||||||| ||| |||| ||||   ||| |||||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||||    
T  23580559 ttcaatttctcatccccgttgaatataggtaatgtaacaggtaagtatatgagaatcgggtatggggac-gggaaggtaaaacccgtccccacccc 23580465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 29284067 - 29283968
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| ||||| || | ||| || ||| ||||||||||||| || || |||| | ||| ||||||||||||||||||||||||    
T  29284067 ttcaatttctcatccccgttgggtatggatagggtaacgggtaagtatatgagaatcgggtatgaggacggagaaggtaaaacccgtccccaccccgccc 29283968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 26 - 139
Target Start/End: Original strand, 30616664 - 30616778
Alignment:
Q  26 atttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccatt 124  Q
    |||||||||||   ||||||||||||| | ||| | |||| ||||||||||| | || ||||||  ||||  ||||||||||||||||||||||||||||    
T  30616664 atttctcatccttgttggatatgggtagggtaacaagtaagtatatgagaatagggtatggggatggggatggtaaaacccgtccccaccccgccccatt 30616763  T
Q  125 gtcatacctaattgc 139  Q
    | ||| |||| ||||    
T  30616764 gccatgcctagttgc 30616778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 34025696 - 34025578
Alignment:
Q  17 tgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccc 115  Q
    |||| ||||||||||||||||| |||||||||  || | |||  ||||| ||||||||||||  || ||||||| | ||| |||||| |||||||||| |    
T  34025696 tgagattcaatttctcatccccgttggatatgaatagggtaacgggtaagtatatgagaatcaggtatggggacggagaaggtaaaatccgtccccactc 34025597  T
Q  116 cgccccattgtcataccta 134  Q
    |||||||||| ||| ||||    
T  34025596 cgccccattgccatgccta 34025578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 23154357 - 23154476
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| || |||||||||||||| ||| ||||||||| | ||| || ||| ||||||||||||| || |  | || ||||| ||||||||||||||||||    
T  23154357 atgagatttaatttctcatccccgttgaatatgggtagggtaacggataagtatatgagaatcgggtataagaacggggaaggtaaaacccgtccccacc 23154456  T
Q  115 ccgccccattgtcataccta 134  Q
    || ||| |||| ||| ||||    
T  23154457 ccaccctattgccatgccta 23154476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 48391160 - 48391279
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||||| |||| | |||  |||||||| | ||| |||||| |||||||||||||    ||||||  ||||  ||||||||||||||||||    
T  48391160 atgagattcaatttctaatcctcgttgagtatgggtaaggtaacaggtaagtatatgagaatcggacatggggatggggagggtaaaacccgtccccacc 48391259  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  48391260 ccgccccattgccatgccta 48391279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 30682548 - 30682474
Alignment:
Q  62 taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattgtcatacctaat 136  Q
    |||||||||||||||||| | || ||||  ||||  |||||| ||||| ||||||||||||||| ||||||||||    
T  30682548 taaatatatgagaatcgaatatgaggacgaggaagataaaactcgtcctcaccccgccccattgccatacctaat 30682474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 17146500 - 17146607
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||| ||||| || |||  |||||||| | ||| || ||| ||||||||||||| || ||||||| |||||   ||||||||||||||||    
T  17146500 atgagattcaatttgtcatctccgttgagtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaa---aaaacccgtccccacc 17146596  T
Q  115 ccgccccattg 125  Q
    ||||| |||||    
T  17146597 ccgcctcattg 17146607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 19111428 - 19111364
Alignment:
Q  61 gtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattg 125  Q
    |||| |||||||||| || || |||||||  |||||||||||||||||||| || ||||||||||    
T  19111428 gtaagtatatgagaaccgggtatggggacgaggaatgtaaaacccgtcccctccacgccccattg 19111364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 44953847 - 44953883
Alignment:
Q  98 taaaacccgtccccaccccgccccattgtcataccta 134  Q
    |||||||||||||||||||||||||||||||| ||||    
T  44953847 taaaacccgtccccaccccgccccattgtcatgccta 44953883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 22536194 - 22536312
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||| ||| | ||| || |||  |||||||||||   | | ||||| ||||| ||||||||||||| || |    
T  22536194 atgagattcaatttctcatccccgttgggtatgagtagggtaacagataagcatatgagaatcagatatagggacggggaaggtaaaacccgtccaca-c 22536292  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||||||||    
T  22536293 ccgccccattgccataccta 22536312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 53631639 - 53631540
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||||||||||||||||||||| |||||  |||||||| || ||| ||||| ||||||  || || | ||  |||||||||||| ||| ||||||    
T  53631639 atgaggttcaatttctcatccccattgaatatgtatatgataacggataagtatataagaatcaggtatgagaacgaggaatgtaaaactcgtacccacc 53631540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 52197845 - 52197795
Alignment:
Q  60 ggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccc 110  Q
    ||||| |||||||||||||||| ||||||| | ||| ||||||||||||||    
T  52197845 ggtaagtatatgagaatcgagtatggggacggagaaggtaaaacccgtccc 52197795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 4e-27; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 13830468 - 13830354
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| |||||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||    
T  13830468 ttcaatttctcatccccgttgggtatgggtagggtaataggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccc 13830369  T
Q  121 cattgtcatacctaa 135  Q
    ||||| ||| |||||    
T  13830368 cattgccatgcctaa 13830354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 31942511 - 31942624
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||    
T  31942511 ttcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgataatcgggtatggggacggggaatgtaaaacccgtccccaccccgccc 31942610  T
Q  121 cattgtcataccta 134  Q
    ||||||||| ||||    
T  31942611 cattgtcatgccta 31942624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 10208780 - 10208899
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||| || ||| ||||||||||||| || || | || ||||| ||||||||||||||||||    
T  10208780 atgagattcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatgagaacggggaaggtaaaacccgtccccacc 10208879  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  10208880 ccgccccattgccatgccta 10208899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 6028243 - 6028361
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||  |||||||| |||| | ||| ||||||  |||| ||||||| || ||||||| ||||||||||||||||||||||||||||    
T  6028243 ggttcaatttctcatccctgttggatattggtagggtaacaggtaaggatataagaatcgggtatggggacggggaatgtaaaacccgtccccaccccgc 6028342  T
Q  119 cccattgtcatacctaatt 137  Q
    |||| || ||| |||||||    
T  6028343 cccaatgccatgcctaatt 6028361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 7315006 - 7315119
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    |||||||||||||||||  |||||||||| | | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||    
T  7315006 ttcaatttctcatccccgctggatatgggcagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccaccccgccc 7315105  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  7315106 cattgccatgccta 7315119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 15546428 - 15546312
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    |||||||||||||||||||||||||||| |||| | ||| || ||| ||||||||||| | || ||||||  ||||| |||||||||||||||||||||     
T  15546428 ggttcaatttctcatccccattggatataggtagggtaacgggtaagtatatgagaatagggtatggggatggggaaggtaaaacccgtccccaccccga 15546329  T
Q  119 cccattgtcatacctaa 135  Q
    ||||||| ||| |||||    
T  15546328 cccattgccatgcctaa 15546312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 36128458 - 36128577
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||| |||||||| |||| |||||||| | ||| || ||| |||||||||||||  | ||||||| ||||| ||||||||||||||||||    
T  36128458 atgagattcaatttttcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcggatatggggacggggaaggtaaaacccgtccccacc 36128557  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  36128558 ccgccccattgccatgccta 36128577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 9632136 - 9632026
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | ||| || ||| ||||| ||||||| || |||| || ||||| ||||||||||||||||||    
T  9632136 atgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatataagaatcgggtatgggaacggggaaggtaaaacccgtccccacc 9632037  T
Q  115 ccgccccattg 125  Q
    |||||||||||    
T  9632036 ccgccccattg 9632026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 10920395 - 10920281
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| ||||||||||||| | ||| |||||| ||||||||||| | || ||| ||  |||||  |||||||||||||||||||||||    
T  10920395 ttcaatttctcatccccgttggatatgggtagggtaacaggtaagtatatgagaatagggtatggagatggggaagataaaacccgtccccaccccgccc 10920296  T
Q  121 cattgtcatacctaa 135  Q
    ||||| ||| |||||    
T  10920295 cattgccatgcctaa 10920281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 11009092 - 11009205
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaag-gtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||  |||| |||||||| | ||| | |||| ||||||||||||| || ||||||| |||||  |||||||||||||||||||||||    
T  11009092 ttcaatttctcatccctgttgggtatgggtagggtaacgtgtaagtatatgagaatcgggtatggggacggggaagataaaacccgtccccaccccgccc 11009191  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  11009192 cattgccatgccta 11009205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 16227040 - 16227140
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    |||||||||||||| |||||||| |||| |||| ||| | ||| | |||| ||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  16227040 atgaggttcaatttttcatccccgttgggtatgagtagggtaacatgtaagtatatgagaatcgggtatggggacggggaatgtaaaacccgtccccacc 16227139  T
Q  115 c 115  Q
    |    
T  16227140 c 16227140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 37999223 - 37999105
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||| ||||| | ||| || ||| |||||||||||||||| ||||||| ||||| |||||| ||||| |||||    
T  37999223 atgagattcaatttctcatccccgttggatacgggtagggtaacgggtaattatatgagaatcgagtatggggacggggaaggtaaaa-ccgtctccacc 37999125  T
Q  115 ccgccccattgtcataccta 134  Q
    || |||||||| ||| ||||    
T  37999124 ccaccccattgccatgccta 37999105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 30846677 - 30846564
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||  |||||||| |||||||    
T  30846677 ttcaatttctcatccccgttgggtatgggtagggtaacggctaagtatatgagaatcgggtatggggacggggaaggtaaaattcgtccccatcccgccc 30846578  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  30846577 cattgccatgccta 30846564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 37473080 - 37473199
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | ||| |||||| ||||||| ||||  || | ||||| ||||| |||||||||| |||||||    
T  37473080 atgagattcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatgaaaatcaggtatagggacggggaaggtaaaacccgaccccacc 37473179  T
Q  115 ccgccccattgtcataccta 134  Q
    | ||||||||| ||| ||||    
T  37473180 ctgccccattgacatgccta 37473199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 45256562 - 45256441
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| || ||||| |||| | ||| || ||||||||||||||| |  | ||||||| | |||||||||| ||||| |||||    
T  45256562 atgagattcaatttctcatccccgttagatataggtagggtaacggataaatatatgagaattggatatggggacggagaatgtaaaatccgtctccacc 45256463  T
Q  115 ccgccccattgtcatacctaat 136  Q
    |||| |||||| ||| ||||||    
T  45256462 ccgctccattgccatgcctaat 45256441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 18106441 - 18106527
Alignment:
Q  28 ttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccac 113  Q
    ||||||||||| ||||||||||||| | ||| |||||| |||| |||||||| || ||||||| |||||  ||||||||||||||||    
T  18106441 ttctcatccccgttggatatgggtagggtaacaggtaagtatacgagaatcgggtatggggacggggaagataaaacccgtccccac 18106527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 22900521 - 22900419
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||| ||||||||||||| |||| |||||||| | ||| || ||| ||||||||||| | || || ||| |||||| ||||||| ||||||||||||||    
T  22900521 ggttcgatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatagggtatgaggatagggaaggtaaaactcgtccccaccccgc 22900422  T
Q  119 ccc 121  Q
    |||    
T  22900421 ccc 22900419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 8916355 - 8916399
Alignment:
Q  91 gggaatgtaaaacccgtccccaccccgccccattgtcatacctaa 135  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||    
T  8916355 gggaatgtaaaacccgtccccaccccgccccattgccatgcctaa 8916399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 13705712 - 13705816
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||| || ||| ||||||||||||| || ||      || || ||||||| ||||||||||    
T  13705712 atgagattcaatttctcatccccgttggatatgggtagggtaacggataagtatatgagaatcgggtatg------ggaaaggtaaaactcgtccccacc 13705805  T
Q  115 ccgccccattg 125  Q
    |||||||||||    
T  13705806 ccgccccattg 13705816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 37319632 - 37319561
Alignment:
Q  66 tatatgagaatcgagtttggggacagggaatgtaaaacccgt-ccccaccccgccccattgtcatacctaat 136  Q
    ||||||||||||| || ||||||| ||||||||||||| ||| |||||||| | ||||||||||| ||||||    
T  37319632 tatatgagaatcgggtatggggacggggaatgtaaaactcgtcccccaccctgtcccattgtcatgcctaat 37319561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 37106444 - 37106350
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtcc 109  Q
    ||||| ||||||||||||||| | |||| ||||| || | ||| || ||||||||||||||||| || |||||||  |||| |||||||||||||    
T  37106444 atgagattcaatttctcatcctcgttgggtatggataggctaatggataaatatatgagaatcgggtatggggacgaggaaggtaaaacccgtcc 37106350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 24414488 - 24414585
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||| |||| |||||||| | |||  ||||| | ||||||||| | || || |||| ||||| ||||||| ||||||||||||||    
T  24414488 ttcaatttctcatccccgttgggtatgggtagggtaacgggtaagtgtatgagaatagggtatgtggacggggaaggtaaaactcgtccccaccccgc 24414585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 35336355 - 35336290
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgag 80  Q
    ||||| |||||||||||||| |||||||||||||||| | ||| | |||| |||||||||||||||    
T  35336355 atgagattcaatttctcatctccattggatatgggtagggtaacatgtaagtatatgagaatcgag 35336290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 12194223 - 12194285
Alignment:
Q  60 ggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccatt 124  Q
    ||||| |||||||||||| ||| | ||||| ||||| ||||||||||||||||||||||||||||    
T  12194223 ggtaagtatatgagaatc-agtatagggacggggaa-gtaaaacccgtccccaccccgccccatt 12194285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 40734943 - 40735006
Alignment:
Q  12 atgaatgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgaga 74  Q
    |||||| || ||| ||||||||||||||||| ||||||||| ||||| || |||||||||||||    
T  40734943 atgaattagtttcgatttctcatccccattgaatatgggtaggataacagataaatatatgaga 40735006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 51
Target Start/End: Complemental strand, 4427637 - 4427608
Alignment:
Q  22 ttcaatttctcatccccattggatatgggt 51  Q
    ||||||||||||||||||||||||||||||    
T  4427637 ttcaatttctcatccccattggatatgggt 4427608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 10212177 - 10212076
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||||| || ||| |||| |||||||| | ||| || ||| ||||||||||||| |  ||||||  ||||| ||||||||||||||| ||    
T  10212177 atgagattcaatttcttattcccgttgggtatgggtagggtaacgggtaagtatatgagaatcggggatggggatggggaaggtaaaacccgtccccgcc 10212078  T
Q  115 cc 116  Q
    ||    
T  10212077 cc 10212076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 42798345 - 42798461
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    |||||||| |||||||| |||| |||| ||| | ||| || ||| ||||||||||||   | ||||||   |||| |||||||||||||||| ||||| |    
T  42798345 ttcaatttatcatccccgttgggtatgtgtagggtaacagataagtatatgagaatcatatatggggatgaggaaggtaaaacccgtccccatcccgctc 42798444  T
Q  121 cattgtcatacctaatt 137  Q
    ||||| ||| |||||||    
T  42798445 cattgacattcctaatt 42798461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 6e-26; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 40517545 - 40517425
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | ||| |||||| ||||||||||||| || ||||||| ||||| ||||||||| ||||||||    
T  40517545 atgagattcaatttctcatccccgttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccatccccacc 40517446  T
Q  115 ccgccccattgtcatacctaa 135  Q
    ||||||||||| ||| |||||    
T  40517445 ccgccccattgccatgcctaa 40517425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 3565070 - 3565179
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||    
T  3565070 atgagattcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatggggac-gggaaggtaaaacccgtccccacc 3565168  T
Q  115 ccgccccattg 125  Q
    |||||||||||    
T  3565169 ccgccccattg 3565179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 22695258 - 22695371
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaag-gtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    |||||||||||||||||||||| |||||||| | ||| | |||| ||||||||||| | || | ||||| ||||| ||||||||||||||||||||||||    
T  22695258 ttcaatttctcatccccattgggtatgggtagggtaacgagtaagtatatgagaattgggtatagggacggggaaggtaaaacccgtccccaccccgccc 22695357  T
Q  121 cattgtcataccta 134  Q
    ||||||||| ||||    
T  22695358 cattgtcattccta 22695371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 30115229 - 30115119
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    |||||||||| ||||||| ||||||||| |||| ||||| |||||| |||||||||||||  | |||| || ||||||||||||||||| ||||||||||    
T  30115229 ggttcaatttttcatccctattggatataggtaagataacaggtaagtatatgagaatcggatatgggaacggggaatgtaaaacccgttcccaccccgc 30115130  T
Q  119 cccattgtcat 129  Q
    || ||||||||    
T  30115129 cctattgtcat 30115119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 15889949 - 15889830
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| || | |||||||| | ||| |||||| |||||||||||||  | ||||||  ||||| ||||||||||||||||||    
T  15889949 atgagattcaatttctcatccccgttaggtatgggtagggtaacaggtaagtatatgagaatcggttatggggatggggaaggtaaaacccgtccccacc 15889850  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  15889849 ccgccccattgccatgccta 15889830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 1218525 - 1218415
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||| ||| | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||    
T  1218525 atgagattcaatttctcatccccgttgggtatgagtaaggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacc 1218426  T
Q  115 ccgccccattg 125  Q
    |||| ||||||    
T  1218425 ccgctccattg 1218415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 38006825 - 38006931
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||| |||| |||||||| | ||| || ||| ||||| ||||||| || |||| || |||||||||||||||||||||||||| |    
T  38006825 ggttcaatttctcatccccgttgggtatgggtagggtaacggataagtatataagaatcgggtatgggaacggggaatgtaaaacccgtccccaccccac 38006924  T
Q  119 cccattg 125  Q
    |||||||    
T  38006925 cccattg 38006931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 20973836 - 20973955
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtt-tggggacagggaatgtaaaacccgtccccac 113  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||| |||||| ||||| |||||| |||| ||||||| ||||| |||||||||||||||||    
T  20973836 atgagattcaatttctcatccccgttggatatgggtagggtaacaggtaagtatataagaatc-agttatggggacggggaaggtaaaacccgtccccac 20973934  T
Q  114 cccgccccattgtcataccta 134  Q
    ||| ||| |||| ||| ||||    
T  20973935 ccctcccaattgccatgccta 20973955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 33862591 - 33862659
Alignment:
Q  66 tatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattgtcataccta 134  Q
    ||||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  33862591 tatatgagaatcgggtatggggacggggaatgtaaaacccgtccccaccccgcctcattgtcatgccta 33862659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 17853631 - 17853749
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||  |||| |||||||| | ||| |||||| ||||||||||||| || ||||||| ||||| ||||||||||||||||||    
T  17853631 atgagattcaatttctcatcccg-ttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtccccacc 17853729  T
Q  115 ccgccccattgtcataccta 134  Q
    | | ||||||| ||| ||||    
T  17853730 ctgacccattgccatgccta 17853749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 30996335 - 30996217
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||  ||| |||| |||| | ||| |||||||||||||||||||| || || |||| | ||| ||||||||||||||||||    
T  30996335 atgagattcaatttctcatcccg-ttgaatataggtaaggtaacaggtaaatatatgagaatcgggtatgaggacggagaaggtaaaacccgtccccacc 30996237  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  30996236 ccgccccattgccatgccta 30996217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 28045384 - 28045271
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||  |||||||| | ||| |||||| |||||||||||||| | ||||||  || || |||||||||||||||||| ||| |    
T  28045384 ttcaatttctcatccccgttgagtatgggtagggtaacaggtaagtatatgagaatcgaatatggggatgggaaaggtaaaacccgtccccaccgcgcac 28045285  T
Q  121 cattgtcataccta 134  Q
    ||||||||| ||||    
T  28045284 cattgtcatgccta 28045271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 6093462 - 6093578
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| ||||||||||||| | ||| | |||| ||||||||||||| || ||  ||  |||||  ||||||||||||||| |||||||    
T  6093462 ttcaatttctcatccccgttggatatgggtagggtaacaagtaagtatatgagaatcgggtatgaagatggggaagataaaacccgtccccatcccgccc 6093561  T
Q  121 cattgtcatacctaatt 137  Q
    ||||| ||| |||||||    
T  6093562 cattgccatgcctaatt 6093578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 4582906 - 4582839
Alignment:
Q  67 atatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattgtcataccta 134  Q
    ||||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||| ||| ||||    
T  4582906 atatgagaatcgagtatggagacggggaaggtaaaacccgtccccaccccgccccattgccatgccta 4582839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 12866903 - 12867013
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||| | |||| ||||| || ||||| || ||| |||||||||||||||| | || || ||||| ||||| |||||||| |||    
T  12866903 atgagattcaatttctcatccacgttgggtatggataggataacggataagtatatgagaatcgagtataggaacggggaaggtaaaccccgtcccaacc 12867002  T
Q  115 ccgccccattg 125  Q
    |||||||||||    
T  12867003 ccgccccattg 12867013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 2413069 - 2413189
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    |||| |||||||||||||| ||| ||||||||||||| | ||| || ||| ||||| |||||||  | || |||| | ||||||||||| ||||||||||    
T  2413069 atgaagttcaatttctcattcccgttggatatgggtagggtaacagataagtatataagaatcggatatgaggacggagaatgtaaaactcgtccccacc 2413168  T
Q  115 -ccgccccattgtcataccta 134  Q
     ||||||||||||||| ||||    
T  2413169 tccgccccattgtcatgccta 2413189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 27088702 - 27088802
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||||||||| ||||||| ||||||||||||| | |||  ||||||||||| | ||||| || || |||  |||||||||||| |||||||||||    
T  27088702 atgaggttcaatttcccatccccgttggatatgggtagggtaacgggtaaatatattaaaatcgggtatgaggaaggggaatgtaaaatccgtccccacc 27088801  T
Q  115 c 115  Q
    |    
T  27088802 c 27088802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 12447116 - 12447002
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    |||||| |||||||||||| |||| |||||||| | ||| || ||| |||||| |||||   | ||||||| |||||||||||||||||||||| |||||    
T  12447116 ggttcattttctcatccccgttgggtatgggtaaggtaacgggtaagtatatgtgaatcagatatggggacggggaatgtaaaacccgtcccca-cccgc 12447018  T
Q  119 cccattgtcataccta 134  Q
    ||||||| ||| ||||    
T  12447017 cccattgccatgccta 12447002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 5909033 - 5909126
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtc 108  Q
    ||||| ||||||||||||||||| |||| || ||||| | ||| || ||| ||||||||||||| || ||||||| ||||| ||||||||||||    
T  5909033 atgagattcaatttctcatccccgttgggtacgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacccgtc 5909126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 42987828 - 42987929
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||| ||| ||||||||| |||   |||  ||||| |||| |||||||| || ||||||| ||||| |||| |||||||||||||    
T  42987828 atgagattcaatttctcattcccgttggatatgagtagcgtaacgggtaagtatacgagaatcgggtatggggacggggaaggtaatacccgtccccacc 42987927  T
Q  115 cc 116  Q
    ||    
T  42987928 cc 42987929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 6156268 - 6156379
Alignment:
Q  23 tcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgcccc 121  Q
    |||||||||||||| | ||||||||||||| | |||  ||||| ||||| |||| || || ||||||| ||||| |||||||  ||||||| ||||||||    
T  6156268 tcaatttctcatcctcgttggatatgggtagggtaacgggtaagtatataagaaacgggtatggggacggggaaggtaaaacttgtcccca-cccgcccc 6156366  T
Q  122 attgtcataccta 134  Q
    |||| ||| ||||    
T  6156367 attgccatgccta 6156379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 6369431 - 6369313
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| || |||||||||||||  ||||||||||||| | ||| || ||| |||||||||||||||| || | || |  || ||||| | ||||||||||    
T  6369431 atgagatttaatttctcatcccg-ttggatatgggtagggtaacgggtaagtatatgagaatcgagtatgagaacggaaaaggtaaagctcgtccccacc 6369333  T
Q  115 ccgccccattgtcataccta 134  Q
    |||||||||| |||| ||||    
T  6369332 ccgccccattatcatgccta 6369313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 12712960 - 12712995
Alignment:
Q  99 aaaacccgtccccaccccgccccattgtcataccta 134  Q
    ||||||||||||||||||||||||||| ||||||||    
T  12712960 aaaacccgtccccaccccgccccattgccataccta 12712995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 12774224 - 12774259
Alignment:
Q  99 aaaacccgtccccaccccgccccattgtcataccta 134  Q
    ||||||||||||||||||||||||||| ||||||||    
T  12774224 aaaacccgtccccaccccgccccattgccataccta 12774259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 18116873 - 18116911
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatg 54  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  18116873 atgagattcaatttctcatcccccttggatatgggtatg 18116911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 42717976 - 42718038
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatc 77  Q
    |||||||| |||||||||||||| ||| ||||||||| | ||| | |||||||||||||||||    
T  42717976 atgaggtttaatttctcatccccgttgaatatgggtagggtaacaagtaaatatatgagaatc 42718038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 10126763 - 10126726
Alignment:
Q  97 gtaaaacccgtccccaccccgccccattgtcataccta 134  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  10126763 gtaaaactcgtccccaccccgccccattgtcatgccta 10126726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 35311549 - 35311436
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    |||||||| |||||||| ||||||||  ||| ||||| || ||| |||||||||||||  | ||||||  | ||| |||||| |||||| ||||||| ||    
T  35311549 ttcaatttttcatccccgttggatatatgtaggataacgggtaagtatatgagaatcggatatggggatggagaaggtaaaatccgtccgcaccccgtcc 35311450  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  35311449 cattgccatgccta 35311436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 4920564 - 4920468
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccg 117  Q
    |||| |||||||||| | |||| |||||||| | ||| || ||| ||||||| ||||| || | |||| |||||| |||||||||||||||| ||||    
T  4920564 ttcattttctcatcctcgttgggtatgggtagggtaacgggtaagtatatgataatcgggtatagggatagggaaggtaaaacccgtccccatcccg 4920468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 10822970 - 10823002
Alignment:
Q  97 gtaaaacccgtccccaccccgccccattgtcat 129  Q
    |||||| ||||||||||||||||||||||||||    
T  10822970 gtaaaaaccgtccccaccccgccccattgtcat 10823002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 27900891 - 27900931
Alignment:
Q  94 aatgtaaaacccgtccccaccccgccccattgtcataccta 134  Q
    ||||||||| |||||||||||||||||||||| ||| ||||    
T  27900891 aatgtaaaatccgtccccaccccgccccattgccatgccta 27900931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 28569565 - 28569609
Alignment:
Q  91 gggaatgtaaaacccgtccccaccccgccccattgtcatacctaa 135  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||    
T  28569565 gggaaggtgaaacctgtccccaccccgccccattgtcatgcctaa 28569609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 14498 - 14613
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||  |||| |||||||| | ||| |||||| ||||||||||||| || ||||||| |||||||||||| |||||||||||||||    
T  14498 ggttcaatttctcatccctgttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaatgtaaaatccgtccccaccccgc 14597  T
Q  119 cccattgtcataccta 134  Q
    ||||||| ||| ||||    
T  14598 cccattgccatgccta 14613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 38152637 - 38152524
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||  |||||||| | ||| || ||| |||||||||||||||| |||| || ||||| ||||||||||||||||||||||||    
T  38152637 ttcaatttctcatccccgttgagtatgggtagggtaacgggtaagtatatgagaatcgagtatgggaacggggaaggtaaaacccgtccccaccccgccc 38152538  T
Q  121 cattgtcataccta 134  Q
    ||||||||| ||||    
T  38152537 cattgtcatgccta 38152524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 18125578 - 18125698
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaag-gtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| || ||||||| || ||||| | |||| ||||||||||||| || |||| |||||||| ||||||||||||||||||    
T  18125578 atgagattcaatttctcatccccgttagatatggataggataacgagtaagtatatgagaatcgggtatgggaacagggaaggtaaaacccgtccccacc 18125677  T
Q  115 ccgccccattgtcatacctaa 135  Q
    |||| |||||| ||| |||||    
T  18125678 ccgctccattgccatgcctaa 18125698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 3227891 - 3228010
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||| || ||| || ||||||||||  | ||||||| ||||  ||||||||||||||||||    
T  3227891 atgagattcaatttctcatccccgttggatatgggtagggtaacggataagtagatgagaatcggatatggggacggggagggtaaaacccgtccccacc 3227990  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||||||||    
T  3227991 ccgccccattgccataccta 3228010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 7779750 - 7779631
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||| || ||| |||| |||||||| || ||||||| ||||| ||||||||||||||||||    
T  7779750 atgagattcaatttctcatccccgttggatatgggtagggtaacagataagtatacgagaatcgggtatggggacggggaaggtaaaacccgtccccacc 7779651  T
Q  115 ccgccccattgtcataccta 134  Q
    || |||||||| ||| ||||    
T  7779650 ccaccccattgccatgccta 7779631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 45886115 - 45886238
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||| |||||| ||||||||||| | || ||| ||| ||||| ||||||||| || |||||    
T  45886115 atgagattcaatttctcatccccgttggatatgggtagggtaacaggtaagtatatgagaattgggtatggagacggggaaggtaaaacccatctccacc 45886214  T
Q  115 ccgccccattgtcatacctaattg 138  Q
    ||||||||||| ||| ||||||||    
T  45886215 ccgccccattgccatgcctaattg 45886238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 37103503 - 37103617
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| || ||||||||||| | | | |  ||||||| ||||| | ||| ||||||||||||    
T  37103503 atgagattcaatttctcatccccattggatatgggtaggataacggataaatatatgacattaggggatggggacggggaaggcaaaccccgtccccacc 37103602  T
Q  115 ccgccccattgtcat 129  Q
    |||||||||||||||    
T  37103603 ccgccccattgtcat 37103617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 17851608 - 17851488
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||||||||| || ||||||| ||||| |||||||  |||||||||    
T  17851608 atgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacggggaaggtaaaacttgtccccacc 17851509  T
Q  115 ccgccccattgtcatacctaa 135  Q
    ||||||||||| ||| |||||    
T  17851508 ccgccccattgccatgcctaa 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 25783257 - 25783364
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||||||| ||||||||| | ||| | |||| ||||||||||||  || ||||||||||||||||||||  ||| ||||||||||||    
T  25783257 ttcaatttctcatccccattgaatatgggtagggtaacatgtaagtatatgagaatcaggtatggggacagggaatgtaaaattcgt-cccaccccgccc 25783355  T
Q  121 cattgtcat 129  Q
    |||||||||    
T  25783356 cattgtcat 25783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 10072231 - 10072112
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||  |||| |||||||| | ||| |||||| ||||||||||||| || ||||||  ||||| ||||||||||| ||||||    
T  10072231 atgagattcaatttctcatccctgttgggtatgggtagggtaacaggtaagtatatgagaatcgggtatggggatggggaaggtaaaacccgttcccacc 10072132  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  10072131 ccgccccattgccatgccta 10072112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 30650373 - 30650254
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||| || ||| ||||||||||||| || ||| ||  ||||| ||||||||||||||| ||    
T  30650373 atgagattcaatttctcatccccgttggatatgggtagggtaacgggtaagtatatgagaatcgggtatggagatggggaaggtaaaacccgtcccctcc 30650274  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  30650273 ccgccccattgccatgccta 30650254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 44986248 - 44986366
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||||||||| |  |||||||| |||| | ||| |||||| ||||||||||||| || ||||||| ||||| ||||||| |||||||| |    
T  44986248 atgagcttcaatttctcatctcg-ttggatataggtagggtaacaggtaagtatatgagaatcgggtatggggacggggaaggtaaaactcgtccccatc 44986346  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||||||||||||    
T  44986347 ccgccccattgtcataccta 44986366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 25980274 - 25980394
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||||| |||||| |||| |||||||| | ||| || ||| ||||||||||||| |||||||||| ||||| ||||||||| ||||||||    
T  25980274 atgagattcaatttcttatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtttggggac-gggaaggtaaaacccatccccacc 25980372  T
Q  115 ccgccccattgtcatacctaat 136  Q
    || |||||||| ||| ||||||    
T  25980373 ccaccccattgccatgcctaat 25980394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 10996197 - 10996316
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    |||| |||| ||||||||||||| ||| |||||||||   ||| |||||| ||||||||||| | || ||||||  ||||| ||||||||||||||||||    
T  10996197 atgatgttcgatttctcatccccgttgaatatgggtagagtaacaggtaagtatatgagaatagggtatggggatggggaaggtaaaacccgtccccacc 10996296  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  10996297 ccgccccattgccatgccta 10996316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 5567501 - 5567613
Alignment:
Q  26 atttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccatt 124  Q
    ||||||||||||| ||||||||| ||| | ||| |||||| ||||||||||| | || ||||||| ||| | ||||||| | ||||||||||||||||||    
T  5567501 atttctcatccccgttggatatgagtagggtaacaggtaagtatatgagaatagggtatggggacgggggaggtaaaactcatccccaccccgccccatt 5567600  T
Q  125 gtcatacctaatt 137  Q
    | ||| |||||||    
T  5567601 gccatgcctaatt 5567613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 33840817 - 33840698
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||| ||||||||||||| |||  |||||||| | ||| |||||| |||||||||||   |  ||||||  | ||| ||||||||||||||||||    
T  33840817 atgaggttcgatttctcatccccgttgagtatgggtagggtaacaggtaagtatatgagaatatggcatggggatggagaaggtaaaacccgtccccacc 33840718  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||||||||    
T  33840717 ccgccccattgccataccta 33840698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 44734715 - 44734826
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||| | |||| |||||||| ||||| || ||| |||||||||||||  | ||| ||| |||||  ||||| ||||| |||||||||||    
T  44734715 ttcaatttctcatcctcgttgggtatgggtaggataacggataagtatatgagaatcggatatggagacggggaagataaaatccgtcaccaccccgccc 44734814  T
Q  121 cattgtcatacc 132  Q
    ||||||||||||    
T  44734815 cattgtcatacc 44734826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 25905371 - 25905249
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaag-gtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| |||||||||||||||   |||| |||||||| | ||| | |||| ||||||||||||  || |||  || ||||| ||||||||||||||||||    
T  25905371 atgagattcaatttctcatccttgttgggtatgggtagggtaacgagtaagtatatgagaatcaggtatggaaacggggaaggtaaaacccgtccccacc 25905272  T
Q  115 ccgccccattgtcatacctaatt 137  Q
    ||||||||||| ||| |||||||    
T  25905271 ccgccccattgccatgcctaatt 25905249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 16865906 - 16865793
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||| ||||| || ||||||   |||| |||||||||||||||||| |||||    
T  16865906 ttcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatatgataatcgggtatggggatgaggaaggtaaaacccgtccccacctcgccc 16865807  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  16865806 cattgccatgccta 16865793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 21702416 - 21702303
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgata-aaggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||  |||||||| | ||   ||||| ||||||||||||| || ||||||  ||||| |||||||||||||||||||| |||    
T  21702416 ttcaatttctcatccccgttgagtatgggtagggtagcgggtaagtatatgagaatcgggtatggggatggggaaggtaaaacccgtccccacccctccc 21702317  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  21702316 cattgccatgccta 21702303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 35074201 - 35074093
Alignment:
Q  26 atttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccatt 124  Q
    ||||||||||||| |||| |||||||| | ||| || ||| ||||||||||||| || |||  || ||||| ||||||||||||||||||||||||||||    
T  35074201 atttctcatccccgttgggtatgggtagggtaacgggtaagtatatgagaatcgggtatgga-acggggaaggtaaaacccgtccccaccccgccccatt 35074103  T
Q  125 gtcataccta 134  Q
    | ||| ||||    
T  35074102 gccatgccta 35074093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 37196338 - 37196447
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | ||| || ||| |||| |||||||  || || |||| || || ||||||||||||||||||    
T  37196338 atgagattcaatttctcatccccgttgggtatgggtagggtaacgggtaagtatacgagaatcaggtatgaggacgggaaaggtaaaacccgtccccacc 37196437  T
Q  115 ccgccccatt 124  Q
    ||||||||||    
T  37196438 ccgccccatt 37196447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 41741799 - 41741920
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||  ||||||||||||| |||||  |||||||||| ||||||||  | |||| ||||||||  |||||||  | |||||     
T  41741799 atgagattcaatttctcatccctgttggatatgggtaggataacgggtaaatatacgagaatcggatatgggaacagggaagataaaacctattcccact 41741898  T
Q  115 ccgccccattgtcatacctaat 136  Q
    ||||||||||| ||| ||||||    
T  41741899 ccgccccattgccatgcctaat 41741920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 44658641 - 44658709
Alignment:
Q  66 tatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattgtcataccta 134  Q
    ||||||| ||||| ||  |||||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  44658641 tatatgataatcgggtacggggacagggaaggtaaaacccgtccccaccccgccccattgccatgccta 44658709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 2632319 - 2632436
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||||||||||||||||| |||| ||||| || | ||| || ||| ||||||||||||  || |||| || | ||||||||||||||||||||||    
T  2632319 atgaggttcaatttctcatccccgttgggtatgg-tagggtaacgggtaagtatatgagaatcaggtatggg-acggagaatgtaaaacccgtccccacc 2632416  T
Q  115 ccgccccattgtcataccta 134  Q
    | ||||||||| ||| ||||    
T  2632417 ctgccccattgccatgccta 2632436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 18826224 - 18826338
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||| || | |||||||| | ||| || ||| ||||||||||||| || |||||||   ||||||||||||| | ||||||||||    
T  18826224 ggttcaatttctcatccccgttaggtatgggtagggtaacgggtaagtatatgagaatcgggtatggggacgaagaatgtaaaaccc-ttcccaccccgc 18826322  T
Q  119 cccattgtcataccta 134  Q
    ||||||| ||| ||||    
T  18826323 cccattgccatgccta 18826338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 37579002 - 37578887
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||| |||| |||| ||| | ||| || ||| ||||||| ||||| || ||||||  |||||||||||| || |||||||||||     
T  37579002 ggttcaatttctcatccccgttgggtatgagtagggtaacgggtaagtatatgataatcgggtatggggatggggaatgtaaaatccatccccaccccgt 37578903  T
Q  119 cccattgtcataccta 134  Q
    ||||||| ||| ||||    
T  37578902 cccattgccatgccta 37578887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 38140140 - 38140259
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||| |||||||| | ||| || ||| |||||||||| ||  | |||| ||  |||| ||||||| ||||||||||    
T  38140140 atgagattcaatttctcatccccgttggttatgggtagggtaacgggtaagtatatgagaaccggatatgggtacgaggaaggtaaaactcgtccccacc 38140239  T
Q  115 ccgccccattgtcataccta 134  Q
    ||||||||||| ||| ||||    
T  38140240 ccgccccattgccatgccta 38140259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 43507132 - 43507053
Alignment:
Q  59 aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccccattgtcatacctaattg 138  Q
    |||||| ||||||||||||| || |||| || ||||| |||||||||||||||||| || ||||||| ||| ||||||||    
T  43507132 aggtaagtatatgagaatcgggtatgggaacggggaaggtaaaacccgtccccacctcgtcccattgccatgcctaattg 43507053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 37182009 - 37181898
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    |||||||||||||  |||||| ||||| ||| | ||| || |||||||||||||||||  | ||||||| ||||| |||||| |||||||||||||||||    
T  37182009 ttcaatttctcatatccattg-atatgagtagggtaacagataaatatatgagaatcggatatggggac-gggaaagtaaaatccgtccccaccccgccc 37181912  T
Q  121 cattgtcataccta 134  Q
     |||||||| ||||    
T  37181911 tattgtcatgccta 37181898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 39316730 - 39316618
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||  |||| |||||||| | ||| || ||||||||||||||||| || |||| |  ||||| ||||||||| |||||||||||| |    
T  39316730 ttcaatttctcatcccg-ttgggtatgggtagggtaacgggtaaatatatgagaatcgggtatgggaatggggaaggtaaaacccatccccaccccgctc 39316632  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  39316631 cattgccatgccta 39316618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 46127513 - 46127622
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||||||||||||||||| ||| || ||| || | ||| |||||| ||||||||||| | || ||| ||  |||||||||||| ||||||  |||    
T  46127513 atgaggttcaatttctcatccccgttgaatgtggatagggtaacaggtaagtatatgagaattgggtatggagatggggaatgtaaaatccgtccttacc 46127612  T
Q  115 ccgccccatt 124  Q
    ||||||||||    
T  46127613 ccgccccatt 46127622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 41103388 - 41103276
Alignment:
Q  14 gaatgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtcccca 112  Q
    ||||||| ||||||||||||||||| |||| ||| |||| | ||| || |||  |||||||||||| || ||||||| | ||| |||||||| ||||||     
T  41103388 gaatgagattcaatttctcatccccgttgggtataggtagggtaacgggtaagcatatgagaatcgggtatggggacggagaaggtaaaacctgtccccg 41103289  T
Q  113 ccccgccccattg 125  Q
    ||| |||||||||    
T  41103288 ccctgccccattg 41103276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 32545917 - 32545798
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| || |||||||||||| | ||| ||||||||  ||||| || ||| ||||||| ||| |||  | |||| |||||| |||||||||||||| |||    
T  32545917 atgagatttaatttctcatcctcgttgaatatgggttggataacagataagtatatgaaaatagaggatagggatagggaaggtaaaacccgtcccaacc 32545818  T
Q  115 ccgccccattgtcataccta 134  Q
    || | |||||||||||||||    
T  32545817 ccactccattgtcataccta 32545798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 27850678 - 27850792
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaaggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgcc 119  Q
    ||||||||||||||||||| |||| ||||| || |  |  ||||| | ||||||||| | || ||| ||| ||||||||||||| |||||||| | || |    
T  27850678 ggttcaatttctcatccccgttgggtatggataggtaacgggtaagtgtatgagaattgggtatggagacggggaatgtaaaactcgtccccatctcgtc 27850777  T
Q  120 ccattgtcataccta 134  Q
    |||||||||| ||||    
T  27850778 ccattgtcatgccta 27850792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 3773745 - 3773636
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||| |||||||||||||| |||||||||||| | ||| |||||| |||||| || | |  | ||||||| || || ||||||||||||||||||    
T  3773745 atgagattcgatttctcatccccactggatatgggtaaggtaacaggtaagtatatgcgagtaggatatggggacgggaaaggtaaaacccgtccccacc 3773646  T
Q  115 ccgccccatt 124  Q
     | |||||||    
T  3773645 tcaccccatt 3773636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 16075388 - 16075319
Alignment:
Q  66 tatatgagaatcgagtttggggacagggaatgtaaaacccgtcccca-ccccgccccattgtcataccta 134  Q
    |||||||||||||  | ||||||| ||||||||||||||| |||||| ||||||||||||| ||| ||||    
T  16075388 tatatgagaatcggatatggggacggggaatgtaaaacccttccccacccccgccccattgccatgccta 16075319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 42908407 - 42908520
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| || ||| ||||||  | | | |  ||||||  ||||| | ||||||||||||||||||||||    
T  42908407 ttcaatttctcatcccctttgggtatgggtagggtaacgggtaagtatatggaagtaggggatggggatggggaaggcaaaacccgtccccaccccgccc 42908506  T
Q  121 cattgtcataccta 134  Q
    ||||||||| ||||    
T  42908507 cattgtcatgccta 42908520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 23328353 - 23328253
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| || |||||||||||| ||||||||||| ||| | ||| | |||| ||||||||||||| ||  ||||||  | |||||||||||||||| ||||    
T  23328353 atgagatttaatttctcatccacattggatatgtgtagggtaacaagtaagtatatgagaatcgggtaaggggaccagaaatgtaaaacccgtcctcacc 23328254  T
Q  115 c 115  Q
    |    
T  23328253 c 23328253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 5432462 - 5432509
Alignment:
Q  91 gggaatgtaaaacccgtccccaccccgccccattgtcatacctaattg 138  Q
    ||||| ||||||||||||| ||||||||||||||| ||| ||||||||    
T  5432462 gggaaggtaaaacccgtccacaccccgccccattgccatgcctaattg 5432509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 17884975 - 17884912
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcg 78  Q
    ||||| ||||||||||||||||| ||| ||||||||| | |||  |||||||||||||||||||    
T  17884975 atgagattcaatttctcatccccgttgaatatgggtagggtaacgggtaaatatatgagaatcg 17884912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 42005640 - 42005525
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||| |||||||||| || |||||||||| ||   ||| || ||||||||||||||||  || ||||||  | |||  |||||||||||||||||||||    
T  42005640 ggttcgatttctcatcgccgttggatatggatagagtaacgggtaaatatatgagaatcaggtatggggatggagaagataaaacccgtccccaccccgc 42005541  T
Q  119 cccattgtcataccta 134  Q
    || ||| |||| ||||    
T  42005540 cctattatcatcccta 42005525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 44794376 - 44794495
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||| ||||||||||||  || |||||||||| | ||| |||||||||||||| |||   || ||| ||| || |||||||||| |||| ||||     
T  44794376 atgagattcgatttctcatccctgttagatatgggtagggtaacaggtaaatatatgaaaattaggtatggagacgggaaatgtaaaactcgtctccact 44794475  T
Q  115 ccgccccattgtcataccta 134  Q
    || ||||||| |||||||||    
T  44794476 ccaccccattatcataccta 44794495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 3920204 - 3920162
Alignment:
Q  92 ggaatgtaaaacccgtccccaccccgccccattgtcataccta 134  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||    
T  3920204 ggaatgtaaaacccatccccaccccgccccattgccatgccta 3920162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 43550904 - 43550953
Alignment:
Q  91 gggaatgtaaaacccgtccccaccccgccccattgtcatacctaattgca 140  Q
    ||||| ||||||||||||||||| ||||||||||| ||| |||| |||||    
T  43550904 gggaaggtaaaacccgtccccactccgccccattgccatgcctatttgca 43550953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 45709208 - 45709321
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||  |||| ||||| || | ||| | |||||||||| | |||||||| ||||||| |  || |||||| ||||||||||||| ||     
T  45709208 ttcaatttctcatcccagttgggtatggatagggtaacatgtaaatatatcataatcgagtatggggacggaaaaggtaaaatccgtccccaccccacct 45709307  T
Q  121 cattgtcataccta 134  Q
    ||||| ||| ||||    
T  45709308 cattgccatgccta 45709321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 16078752 - 16078720
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggta 52  Q
    |||||||||||||||||||||||| ||||||||    
T  16078752 ggttcaatttctcatccccattgggtatgggta 16078720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 45379872 - 45379784
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaac 103  Q
    ||||| ||||||||||||||||| || |||||||||| | ||| || ||||||||| || |||| || ||| ||  |||||||||||||    
T  45379872 atgagattcaatttctcatccccgttagatatgggtagggtaacagataaatatataagtatcgggtatggcgatggggaatgtaaaac 45379784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 33321 - 33212
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaaggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccc 115  Q
    ||||||||||||||||||||||| ||||||||||||| |  |  ||||| ||||||| ||||| || |||||||| ||||||||||||||||| |||||     
T  33321 atgaggttcaatttctcatccccgttggatatgggtaggtgacgggtaagtatatgataatcgggtatggggacaaggaatgtaaaacccgtctccacct 33222  T
Q  116 cgccccattg 125  Q
    |||| |||||    
T  33221 cgcctcattg 33212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 33133 - 33012
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||| ||| |||| |||||||| | ||| || ||| ||||||||||||  || ||||||| |||||||||||||| |||||||||    
T  33133 atgagattcaatttctcattcccgttgggtatgggtagggtaacgggtaagtatatgagaatcaggtatggggacggggaatgtaaaacctgtccccacc 33034  T
Q  115 ccgccccattgtcatacctaat 136  Q
    ||||||||||| ||| ||||||    
T  33033 ccgccccattgccatgcctaat 33012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 3990 - 3874
Alignment:
Q  22 ttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgccc 120  Q
    ||||||||||||||||| |||| |||||||| | ||| | |||||||||||||||||| || ||||||| | ||| |||||| |||||||||||| ||||    
T  3990 ttcaatttctcatccccgttgggtatgggtagggtaataagtaaatatatgagaatcgggtatggggacggagaaggtaaaatccgtccccacccggccc 3891  T
Q  121 cattgtcatacctaatt 137  Q
    ||||| ||| |||||||    
T  3890 cattgccatgcctaatt 3874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 199143 - 199252
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaa-ggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    |||| |||||| ||||||||||| |||  |||||||| | |||  ||||| ||||||||||||  || ||||||| ||||||||||||||||||||||||    
T  199143 atgatgttcaaattctcatcccctttgagtatgggtagggtaactggtaagtatatgagaatctggtatggggacggggaatgtaaaacccgtccccacc 199242  T
Q  115 ccgccccatt 124  Q
    ||||||||||    
T  199243 ccgccccatt 199252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 14511 - 14395
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||| ||| ||||||||| | ||| | |||| ||||||||||| |||| |||||||  ||||||||||| ||||||| |||   |    
T  14511 ggttcaatttctcatccccgttgaatatgggtagggtaacaagtaagtatatgagaattgagtatggggacgaggaatgtaaaatccgtcccaaccttac 14412  T
Q  119 cccattgtcatacctaa 135  Q
    ||||||||||| |||||    
T  14411 cccattgtcatgcctaa 14395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 32874 - 32988
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||| |||| | |||||||| | ||| || ||| ||||||||||||  || ||||||| | ||| ||||||| ||||||||||    
T  32874 atgagattcaatttctcatcctcattaggtatgggtagggtaacgggtaagtatatgagaatcaggtatggggacggagaaggtaaaactcgtccccacc 32973  T
Q  115 ccgccccattgtcat 129  Q
    |||||||||| ||||    
T  32974 ccgccccattatcat 32988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 35888 - 35785
Alignment:
Q  20 ggttcaatttctcatccccattggatatgggtatgataaaggtaaa-tatatgagaatcgagtttggggacagggaatgtaaaacccgtccccaccccgc 118  Q
    ||||||||||||||||||| ||||||||| ||| | ||| ||  || |||||| |||||| || ||||||| |||||| |||||| ||||| ||||||||    
T  35888 ggttcaatttctcatccccgttggatatgagtagggtaacgggcaagtatatgtgaatcgggtatggggacggggaatataaaactcgtcctcaccccgc 35789  T
Q  119 ccca 122  Q
    ||||    
T  35788 ccca 35785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 10040 - 9919
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| |||  ||||| || | ||| || ||| |||||||||||   || ||| ||| ||||| ||||||| ||||||||||    
T  10040 atgagattcaatttctcatccccgttgagtatggatagggtaacggataagtatatgagaattatgtatggagacggggaaggtaaaacacgtccccacc 9941  T
Q  115 ccgccccattgtcatacctaat 136  Q
    || |||||||||||| ||||||    
T  9940 ccaccccattgtcatgcctaat 9919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 90335 - 90216
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataaagg-taaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||||||||||||||||||||  |||| ||||| || | ||| || ||| ||||||||||||  || ||  ||| | |||||||||||||||||||| |    
T  90335 atgaggttcaatttctcatccctgttgggtatggatagggtaacgggtaagtatatgagaatcaggtatgctgacggagaatgtaaaacccgtccccatc 90236  T
Q  115 ccgccccattgtcataccta 134  Q
    || |||||||| ||| ||||    
T  90235 ccaccccattgccatgccta 90216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 67464 - 67345
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||||||| ||||||||| | ||| |||||||||||||  | | | |  ||||||| ||||| | |||| || |||||||     
T  67464 atgagattcaatttctcatccccattgaatatgggtagggtaacaggtaaatatatggcagtaggggatggggacggggaaggcaaaagccatccccaca 67365  T
Q  115 ccgccccattgtcataccta 134  Q
     |||||||||||||| ||||    
T  67364 tcgccccattgtcatgccta 67345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 75307 - 75188
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||||||| ||||||||| | ||| |||||||||||||  | | | |  ||||||| ||||| | |||| || |||||||     
T  75307 atgagattcaatttctcatccccattgaatatgggtagggtaacaggtaaatatatggcagtaggggatggggacggggaaggcaaaagccatccccaca 75208  T
Q  115 ccgccccattgtcataccta 134  Q
     |||||||||||||| ||||    
T  75207 tcgccccattgtcatgccta 75188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1630 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1630
Description:

Target: scaffold1630; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 1361 - 1242
Alignment:
Q  16 atgaggttcaatttctcatccccattggatatgggtatgataa-aggtaaatatatgagaatcgagtttggggacagggaatgtaaaacccgtccccacc 114  Q
    ||||| ||||||||||||||||| || | ||||| || | ||| || ||| ||||||||||||     ||||||| ||||| ||||||||||||||||||    
T  1361 atgagattcaatttctcatccccgttaggtatggatagggtaacagataagtatatgagaatcagacatggggacggggaaggtaaaacccgtccccacc 1262  T
Q  115 ccgccccattgtcataccta 134  Q
    || ||| |||| ||| ||||    
T  1261 ccacccaattgccatgccta 1242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 3754 - 3805
Alignment:
Q  83 tggggacagggaatgtaaaacccgtccccaccccgccccattgtcataccta 134  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||| ||| ||||    
T  3754 tggggacggggaaggtaaaacccgtccccaccccgcctcattgccatgccta 3805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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