View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18743_high_48 (Length: 219)

Name: NF18743_high_48
Description: NF18743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18743_high_48
NF18743_high_48
[»] chr5 (12 HSPs)
chr5 (36-205)||(33084109-33084281)
chr5 (36-92)||(38624719-38624775)
chr5 (36-92)||(16308568-16308624)
chr5 (36-92)||(38626170-38626226)
chr5 (38-92)||(9672353-9672407)
chr5 (37-91)||(28592081-28592135)
chr5 (48-92)||(17555016-17555060)
chr5 (36-98)||(11771195-11771257)
chr5 (39-92)||(28592421-28592473)
chr5 (36-92)||(25916278-25916334)
chr5 (36-92)||(27756785-27756841)
chr5 (36-92)||(30332286-30332342)
[»] chr2 (27 HSPs)
chr2 (38-92)||(22060162-22060216)
chr2 (36-92)||(6844097-6844153)
chr2 (36-92)||(40304762-40304818)
chr2 (36-99)||(6842711-6842774)
chr2 (38-92)||(22054337-22054391)
chr2 (36-92)||(40303296-40303352)
chr2 (36-92)||(45493032-45493088)
chr2 (36-92)||(45499308-45499364)
chr2 (36-92)||(45500774-45500830)
chr2 (37-92)||(10343991-10344046)
chr2 (36-93)||(22053127-22053184)
chr2 (36-92)||(7317393-7317449)
chr2 (36-92)||(22060480-22060536)
chr2 (36-92)||(28165661-28165717)
chr2 (37-92)||(44097354-44097409)
chr2 (47-97)||(42928933-42928983)
chr2 (38-92)||(43516401-43516455)
chr2 (38-92)||(44820932-44820986)
chr2 (55-92)||(44095361-44095398)
chr2 (44-92)||(9660849-9660896)
chr2 (36-92)||(44492311-44492367)
chr2 (38-88)||(40128929-40128979)
chr2 (37-90)||(16142231-16142284)
chr2 (37-90)||(44904532-44904585)
chr2 (36-92)||(16143596-16143652)
chr2 (36-92)||(34591728-34591784)
chr2 (37-97)||(44465091-44465151)
[»] chr7 (21 HSPs)
chr7 (36-92)||(46246575-46246631)
chr7 (36-92)||(12178486-12178542)
chr7 (36-92)||(46245125-46245181)
chr7 (38-92)||(41591518-41591572)
chr7 (38-92)||(706746-706800)
chr7 (38-92)||(11669844-11669898)
chr7 (36-90)||(12180639-12180693)
chr7 (38-92)||(27161997-27162051)
chr7 (38-92)||(41384152-41384206)
chr7 (38-92)||(41385811-41385865)
chr7 (38-92)||(41593205-41593259)
chr7 (47-92)||(39787761-39787806)
chr7 (36-93)||(40028459-40028516)
chr7 (48-92)||(708164-708208)
chr7 (36-92)||(3704401-3704457)
chr7 (36-92)||(13420286-13420342)
chr7 (36-92)||(37131838-37131894)
chr7 (36-92)||(37133649-37133705)
chr7 (48-92)||(37350216-37350260)
chr7 (36-92)||(38758317-38758373)
chr7 (36-92)||(45277967-45278023)
[»] chr3 (20 HSPs)
chr3 (36-92)||(41081805-41081861)
chr3 (36-92)||(31796834-31796890)
chr3 (36-92)||(40499252-40499308)
chr3 (38-92)||(24613614-24613668)
chr3 (38-92)||(32558922-32558976)
chr3 (47-92)||(24612281-24612326)
chr3 (37-93)||(22942338-22942394)
chr3 (36-92)||(31795376-31795432)
chr3 (36-92)||(41083271-41083327)
chr3 (36-92)||(48566999-48567055)
chr3 (38-89)||(31199255-31199306)
chr3 (38-92)||(32613886-32613941)
chr3 (38-93)||(32615648-32615703)
chr3 (37-92)||(48568531-48568586)
chr3 (38-92)||(32559885-32559939)
chr3 (38-92)||(33780660-33780714)
chr3 (38-93)||(31200948-31201003)
chr3 (38-93)||(33781496-33781551)
chr3 (36-92)||(53529534-53529590)
chr3 (48-92)||(55196577-55196621)
[»] chr1 (31 HSPs)
chr1 (40-92)||(26734429-26734481)
chr1 (38-92)||(8323441-8323495)
chr1 (38-92)||(9626471-9626525)
chr1 (38-92)||(31815772-31815826)
chr1 (36-99)||(50317050-50317113)
chr1 (38-92)||(8322524-8322578)
chr1 (38-92)||(31809992-31810046)
chr1 (38-92)||(50315321-50315375)
chr1 (36-89)||(22684150-22684203)
chr1 (36-92)||(24437077-24437133)
chr1 (37-92)||(46604442-46604497)
chr1 (48-92)||(10708033-10708077)
chr1 (37-93)||(14095720-14095776)
chr1 (36-92)||(31027228-31027284)
chr1 (36-92)||(44268891-44268947)
chr1 (37-92)||(12097941-12097996)
chr1 (38-92)||(9627583-9627637)
chr1 (36-90)||(24438948-24439002)
chr1 (38-92)||(28251934-28251988)
chr1 (38-92)||(42301622-42301676)
chr1 (38-92)||(52793707-52793761)
chr1 (36-93)||(40767617-40767674)
chr1 (36-92)||(7184326-7184382)
chr1 (36-92)||(7653689-7653745)
chr1 (48-92)||(9419830-9419874)
chr1 (36-92)||(16592024-16592080)
chr1 (36-92)||(16673256-16673312)
chr1 (36-72)||(31321032-31321068)
chr1 (36-92)||(33259372-33259428)
chr1 (36-92)||(33279531-33279587)
chr1 (36-92)||(36145347-36145403)
[»] scaffold0129 (1 HSPs)
scaffold0129 (38-92)||(4259-4313)
[»] chr8 (14 HSPs)
chr8 (38-92)||(357980-358034)
chr8 (40-92)||(359318-359370)
chr8 (36-92)||(3158037-3158093)
chr8 (36-92)||(39884619-39884675)
chr8 (36-92)||(39886076-39886132)
chr8 (38-92)||(21142482-21142536)
chr8 (47-92)||(45448503-45448548)
chr8 (38-92)||(17707450-17707504)
chr8 (38-92)||(27411242-27411296)
chr8 (38-92)||(36899901-36899955)
chr8 (47-92)||(15279644-15279689)
chr8 (47-92)||(15460013-15460058)
chr8 (48-92)||(17706168-17706212)
chr8 (36-92)||(44690023-44690079)
[»] chr6 (11 HSPs)
chr6 (38-92)||(11065656-11065710)
chr6 (48-92)||(843533-843577)
chr6 (37-92)||(1443420-1443475)
chr6 (38-93)||(30321166-30321221)
chr6 (38-92)||(842189-842243)
chr6 (38-92)||(7796752-7796806)
chr6 (38-92)||(19402124-19402178)
chr6 (38-92)||(20773443-20773497)
chr6 (36-92)||(1256717-1256773)
chr6 (36-92)||(1258440-1258496)
chr6 (48-92)||(19597989-19598033)
[»] chr4 (29 HSPs)
chr4 (38-92)||(4906132-4906186)
chr4 (38-92)||(4932001-4932055)
chr4 (38-92)||(23703865-23703919)
chr4 (40-92)||(4907465-4907517)
chr4 (40-92)||(4933335-4933387)
chr4 (40-92)||(29756275-29756327)
chr4 (36-92)||(33609344-33609400)
chr4 (38-98)||(35786682-35786742)
chr4 (36-99)||(33607464-33607527)
chr4 (36-94)||(22309138-22309196)
chr4 (38-92)||(29757610-29757664)
chr4 (38-92)||(35785168-35785222)
chr4 (39-93)||(54534980-54535034)
chr4 (41-92)||(23702400-23702451)
chr4 (38-99)||(38157016-38157077)
chr4 (36-92)||(2671544-2671600)
chr4 (36-92)||(22307674-22307730)
chr4 (38-98)||(22674149-22674209)
chr4 (47-93)||(39665273-39665319)
chr4 (38-92)||(55019359-55019413)
chr4 (36-92)||(21354776-21354833)
chr4 (36-92)||(19994501-19994557)
chr4 (48-92)||(28426837-28426881)
chr4 (36-92)||(32082633-32082689)
chr4 (36-92)||(42977201-42977257)
chr4 (36-92)||(42978919-42978975)
chr4 (36-92)||(48713462-48713518)
chr4 (36-92)||(55947363-55947419)
chr4 (36-92)||(55948953-55949009)
[»] scaffold0280 (1 HSPs)
scaffold0280 (36-92)||(12134-12190)
[»] scaffold1118 (1 HSPs)
scaffold1118 (36-87)||(2420-2471)
[»] scaffold1176 (1 HSPs)
scaffold1176 (36-92)||(2054-2110)
[»] scaffold0060 (1 HSPs)
scaffold0060 (38-92)||(13253-13307)


Alignment Details
Target: chr5 (Bit Score: 111; Significance: 3e-56; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 36 - 205
Target Start/End: Original strand, 33084109 - 33084281
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaatcttttccaaaatattagtaacttctcccataactgc---tt 132  Q
    ||||||||||||||||||||||| || | |||||||||  || ||||| ||||||||   |||||||||||||||||||||||||||||||||||   ||    
T  33084109 gatacagggatgaaaaccaaaaacacacaaacttacataaactttttatatatttaagcattttccaaaatattagtaacttctcccataactgctgctt 33084208  T
Q  133 ctcacaaccatttttaatagaagagcctctctaatttacaaaggaggtctcattgctacaaacacaccctttg 205  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  33084209 ctcacaaccatttttaatagaagagcctgtctaatttataaaggaggtctcattgctacaaacacaccctttg 33084281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 38624775 - 38624719
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  38624775 gatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 38624719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 16308624 - 16308568
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| ||||||||||||| ||||  |||||||||||||    
T  16308624 gatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 16308568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 38626170 - 38626226
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||| ||| |||||||||||| | ||||||||||| |||||||||||||||||||    
T  38626170 gatacatggacgaaaaccaaaaacatgcgaacttacagggaccttttacatatttaa 38626226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 9672353 - 9672407
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| |||||| |||||||||||| |||||||||| ||||||||    
T  9672353 tacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttatatatttaa 9672407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 28592135 - 28592081
Alignment:
Q  37 atacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatattta 91  Q
    ||||||||| |||||  ||||| ||||||||||||| ||||||||||||||||||    
T  28592135 atacagggacgaaaataaaaaacacgcgaacttacaaggaccttttacatattta 28592081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 17555016 - 17555060
Alignment:
Q  48 aaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||    
T  17555016 aaaaccaaaaacacgcgaacttacatggacaatttacatatttaa 17555060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 11771257 - 11771195
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaatcttt 98  Q
    |||||||||| ||||| |||||| |||| |||||||  | |||||||||||||||||| ||||    
T  11771257 gatacagggacgaaaatcaaaaacacgcaaacttactcgaaccttttacatatttaaaccttt 11771195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 28592421 - 28592473
Alignment:
Q  39 acagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||| |||||| ||||| ||||||||||||| |||||| ||||||||||||    
T  28592421 acagggacgaaaacaaaaaacacgcgaacttaca-ggacctcttacatatttaa 28592473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 25916278 - 25916334
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||  ||||||||||| |||| || ||||||||||  |||||||||||||    
T  25916278 gatacagggacaaaaaccaaaaacacgccaaattacatggacgatttacatatttaa 25916334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 27756785 - 27756841
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||| ||||| ||||||||||| | ||||  |||||||||||||    
T  27756785 gatacagggacgaaaacaaaaaacacgcgaacttagagggacgatttacatatttaa 27756841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 30332342 - 30332286
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||| |||||||||| || ||||| ||||  |||||||||||||    
T  30332342 gatacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaa 30332286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 5e-18; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 22060162 - 22060216
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  22060162 tacagggacgaaaaccaaaaatgcgcgaacttacatggaccttttacatatttaa 22060216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 6844097 - 6844153
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  6844097 gatacaaggatgaaaaccaaaaacacgcgaacttacaaggaccttttacatatttaa 6844153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 40304762 - 40304818
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  40304762 gatacagggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 40304818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 6842774 - 6842711
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaatctttt 99  Q
    ||||||||||||||||||||||| |||| |||||||| | |||||||||||||||||| |||||    
T  6842774 gatacagggatgaaaaccaaaaacacgcaaacttacaggaaccttttacatatttaaacctttt 6842711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 22054391 - 22054337
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  22054391 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 22054337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 40303352 - 40303296
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  40303352 gatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 40303296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 45493032 - 45493088
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| ||||||| ||||| |||||||||||||||||||    
T  45493032 gatacagggacgaaaaccaaaaacacgcgaatttacagggaccttttacatatttaa 45493088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 45499364 - 45499308
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  45499364 gatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 45499308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 45500774 - 45500830
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| ||||||| ||||| |||||||||||||||||||    
T  45500774 gatacagggacgaaaaccaaaaacacgcgaatttacagggaccttttacatatttaa 45500830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 10344046 - 10343991
Alignment:
Q  37 atacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||| |||||| |||||| | ||||||||||||||||||||||||||||||    
T  10344046 atacagggacgaaaacaaaaaatgcacgaacttacatggaccttttacatatttaa 10343991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 22053184 - 22053127
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaa 93  Q
    |||||||||| |||||| ||||| |||||||||||||  |||||||||||||||||||    
T  22053184 gatacagggacgaaaacaaaaaacacgcgaacttacaaagaccttttacatatttaaa 22053127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 7317449 - 7317393
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||| ||| |||||||||||| ||||||||||||| ||| |||||||||||||||    
T  7317449 gatacaaggacgaaaaccaaaaacacgcgaacttacagggatcttttacatatttaa 7317393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 22060480 - 22060536
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||| ||||| |||||||||||| |||| |||||||| |||||||||||||||||||    
T  22060480 gatatagggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaa 22060536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 28165717 - 28165661
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||  |||||||||||  ||| ||||||||||||||||||||||||||||    
T  28165717 gatacagggactaaaaccaaaaacgcgctaacttacatggaccttttacatatttaa 28165661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 44097354 - 44097409
Alignment:
Q  37 atacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||| |||||||||||| |||||||||||||  ||||||||| ||||||||    
T  44097354 atacagggacgaaaaccaaaaacacgcgaacttacagagaccttttatatatttaa 44097409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 42928983 - 42928933
Alignment:
Q  47 gaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaatctt 97  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||| ||||    
T  42928983 gaaaaccaaaaatgcgcgaacttacagagaccttttacatatttaagtctt 42928933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 43516455 - 43516401
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| |||||| |||||| ||||| |||||||||||||||||||    
T  43516455 tacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaa 43516401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 44820932 - 44820986
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| |||||| |||||| ||||| |||||||||||||||||||    
T  44820932 tacagggacgaaaacaaaaaatgcgcgaatttacagggaccttttacatatttaa 44820986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 44095398 - 44095361
Alignment:
Q  55 aaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||| |||||||||||||||||||||||||||||||||    
T  44095398 aaaacacgcgaacttacatggaccttttacatatttaa 44095361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 9660896 - 9660849
Alignment:
Q  44 gatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  9660896 gatgaaaaccaaaaacacgcgaacttacat-gaccttttatatatttaa 9660849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 44492311 - 44492367
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||| ||||| |||||||||||| |||| |||||||||||| | |||||||||||||    
T  44492311 gatagagggacgaaaaccaaaaacacgcaaacttacatggatcgtttacatatttaa 44492367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 40128929 - 40128979
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatat 88  Q
    |||||||| |||||| |||||| |||||| ||||| |||||||||||||||    
T  40128929 tacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatat 40128979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 16142284 - 16142231
Alignment:
Q  37 atacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatattt 90  Q
    |||||| || |||||||||||| ||||||||||||| ||||  |||||||||||    
T  16142284 atacagagacgaaaaccaaaaacacgcgaacttacaaggacgatttacatattt 16142231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 44904585 - 44904532
Alignment:
Q  37 atacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatattt 90  Q
    |||||||||  |||||||||||| ||| ||||||||  ||||||||||||||||    
T  44904585 atacagggactaaaaccaaaaatgcgctaacttacaaagaccttttacatattt 44904532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 16143596 - 16143652
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| ||||| |||||| |||| | |||||  |||||||||||||||||||    
T  16143596 gatacagggacgaaaatcaaaaacacgcaagcttacggggaccttttacatatttaa 16143652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 34591784 - 34591728
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||| ||| |||||| |||||||| | |||||||||||||  |||||||||||||    
T  34591784 gatacaaggacgaaaacaaaaaatacacaaacttacatggacgatttacatatttaa 34591728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 44465091 - 44465151
Alignment:
Q  37 atacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaatctt 97  Q
    ||||| ||| || ||||||||| ||||||||||||| ||||  ||||||||||||| ||||    
T  44465091 atacaaggacgagaaccaaaaacacgcgaacttacagggacgatttacatatttaagtctt 44465151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 46246575 - 46246631
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  46246575 gatacagggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 46246631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 12178542 - 12178486
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| ||||||||||| | |||||||||||||||||||    
T  12178542 gatacagggacgaaaaccaaaaacacgcgaacttagagggaccttttacatatttaa 12178486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 46245181 - 46245125
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  46245181 gatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 46245125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 41591572 - 41591518
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| |||||| |||||| ||||| |||||||||||||||||||    
T  41591572 tacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaa 41591518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 706800 - 706746
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||  ||||||||||| |||| || ||||| |||||||||||||||||||    
T  706800 tacagggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaa 706746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 11669898 - 11669844
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||| ||| |||||||||||| | ||||||||||| ||||| |||||||||||||    
T  11669898 tacatggacgaaaaccaaaaacatgcgaacttacagggaccgtttacatatttaa 11669844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 12180639 - 12180693
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatattt 90  Q
    |||||||||| |||||||||||| ||||||||||||| ||||  || ||||||||    
T  12180639 gatacagggacgaaaaccaaaaacacgcgaacttacagggacaattaacatattt 12180693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 27161997 - 27162051
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||| ||| |||||||||||   |||||||||||| |||||||||||||||||||    
T  27161997 tacaaggacgaaaaccaaaatctcgcgaacttacagggaccttttacatatttaa 27162051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 41384206 - 41384152
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||  ||||| |||||| |||||||||||| ||||| |||||||||||||    
T  41384206 tacagggaccaaaacaaaaaatgcgcgaacttacaaggaccatttacatatttaa 41384152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 41385811 - 41385865
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||  ||||| |||||| |||||||||||| ||||| |||||||||||||    
T  41385811 tacagggaccaaaacaaaaaatgcgcgaacttacagggaccatttacatatttaa 41385865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 41593205 - 41593259
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||  |||||||||||| | |||||||||| ||||| |||||||||||||    
T  41593205 tacagggaccaaaaccaaaaatgcacgaacttacagggaccatttacatatttaa 41593259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 39787806 - 39787761
Alignment:
Q  47 gaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||| |||||| |||| ||||||||||||||| ||||||||||||    
T  39787806 gaaaagcaaaaacacgcaaacttacatggacctcttacatatttaa 39787761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 40028516 - 40028459
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaa 93  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  ||||||||||||||    
T  40028516 gatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaaa 40028459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 708164 - 708208
Alignment:
Q  48 aaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||| |||| || ||||| |||||||||||||||||||    
T  708164 aaaaccaaaaacacgctaaattacagggaccttttacatatttaa 708208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 3704457 - 3704401
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||| ||||| |||||||||||| | ||||||||||||||||  ||||| |||||||    
T  3704457 gataaagggacgaaaaccaaaaacaagcgaacttacatggacgatttacctatttaa 3704401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 13420286 - 13420342
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||  ||||||||||| |||| |||||||| || || |||||||||||||    
T  13420286 gatacagggactaaaaccaaaaacacgcaaacttacaggggccatttacatatttaa 13420342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 37131894 - 37131838
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| | |||||||||| | |||||||||||| |||||  |||||||||||||    
T  37131894 gatacaggaacgaaaaccaaacacacgcgaacttacgtggacgatttacatatttaa 37131838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 37133649 - 37133705
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||| || |||||||||||| ||||||||||||  ||||  |||||||||||||    
T  37133649 gatacagtgacgaaaaccaaaaacacgcgaacttacggggacgatttacatatttaa 37133705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 37350216 - 37350260
Alignment:
Q  48 aaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||    
T  37350216 aaaaccaaaaacacgcgaacttacggggaccatttacatatttaa 37350260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 38758317 - 38758373
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||  |||||||||||  ||| |||||||| ||||||||||| |||||||    
T  38758317 gatacagggactaaaaccaaaaacgcgctaacttacagggaccttttacttatttaa 38758373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 45277967 - 45278023
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||    
T  45277967 gatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 45278023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 8e-17; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 41081861 - 41081805
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  41081861 gatacagggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 41081805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 31796834 - 31796890
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  31796834 gatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 31796890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 40499252 - 40499308
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  40499252 gatacggggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 40499308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 24613614 - 24613668
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| |||||| |||||||||||| |||||||||||||||||||    
T  24613614 tacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaa 24613668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 32558976 - 32558922
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||    
T  32558976 tacagggacgaaaacaaaaaacacgcgaacttacagggaccttttacatatttaa 32558922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 24612326 - 24612281
Alignment:
Q  47 gaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||    
T  24612326 gaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 24612281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 22942394 - 22942338
Alignment:
Q  37 atacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaa 93  Q
    |||||||||||||||||||||| | ||||||||||| ||||  ||||||||||||||    
T  22942394 atacagggatgaaaaccaaaaacaagcgaacttacagggacgatttacatatttaaa 22942338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 31795432 - 31795376
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||  |||||||||||| ||||||||||||| ||||||||||| |||||||    
T  31795432 gatacagggccgaaaaccaaaaacacgcgaacttacagggaccttttacgtatttaa 31795376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 41083271 - 41083327
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||| |||| |||||||||||| |||| |||||||| |||||||||||||||||||    
T  41083271 gatacggggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaa 41083327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 48567055 - 48566999
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||| || |||||||||||| |||| |||||||| |||||||||||||||||||    
T  48567055 gatacagtgacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaa 48566999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 31199306 - 31199255
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatt 89  Q
    |||||||| ||||||| |||||||||||| ||||| ||||||||||||||||    
T  31199306 tacagggacgaaaacctaaaatacgcgaaattacagggaccttttacatatt 31199255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 32613941 - 32613886
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaac-ttacatggaccttttacatatttaa 92  Q
    |||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||    
T  32613941 tacagggacgaaaaccaaaaacacgcgaactttacaaggaccttttacatatttaa 32613886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 32615648 - 32615703
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaa 93  Q
    ||||||||  ||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  32615648 tacagggacaaaaacaaaaaacacgcgaacttacagggaccttttacatatttaaa 32615703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 48568531 - 48568586
Alignment:
Q  37 atacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||| |||| |||||||||||| |||||||||||||  ||||||||||||||||||    
T  48568531 atacggggacgaaaaccaaaaacacgcgaacttacagagaccttttacatatttaa 48568586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 32559885 - 32559939
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||||||  ||||| |||||||||||||  ||||||||||||||||||    
T  32559885 tacagggatgaaaataaaaaacacgcgaacttacagagaccttttacatatttaa 32559939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 33780714 - 33780660
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| ||||||||||||||||||| |||| |||||||| |||||    
T  33780714 tacagggacgaaaacaaaaaatacgcgaacttacagggacattttacatttttaa 33780660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 31200948 - 31201003
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaa 93  Q
    ||||||||| ||||| |||||| ||||||||||||  |||| ||||||||||||||    
T  31200948 tacagggatcaaaacaaaaaatgcgcgaacttacagagaccatttacatatttaaa 31201003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 33781496 - 33781551
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaa 93  Q
    |||| ||| |||||| |||||  |||||||||||| ||||||||||||||||||||    
T  33781496 tacaaggacgaaaacaaaaaacgcgcgaacttacagggaccttttacatatttaaa 33781551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 53529534 - 53529590
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||| |||||||||| || ||||| ||||  |||||||||||||    
T  53529534 gatacagggacgaaaactaaaaatacgccaaattacagggacgatttacatatttaa 53529590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 55196621 - 55196577
Alignment:
Q  48 aaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||||| |||||||||||| ||||||||| | |||||||    
T  55196621 aaaaccaaaaatgcgcgaacttacaaggacctttttcttatttaa 55196577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 8e-17; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 26734481 - 26734429
Alignment:
Q  40 cagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  26734481 cagggacgaaaaccaaaaatgcgcgaacttacatggaccttttacatatttaa 26734429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 8323441 - 8323495
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  8323441 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 8323495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 9626525 - 9626471
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||||||||||||    
T  9626525 tacagggacgaaaacaaaaaatacgcgaacttacagggaccttttacatatttaa 9626471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 31815772 - 31815826
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  31815772 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 31815826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 50317050 - 50317113
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaatctttt 99  Q
    |||||||||| ||||| |||||| ||||||||||||||||||  |||||||||||||| |||||    
T  50317050 gatacagggacgaaaatcaaaaacacgcgaacttacatggacgatttacatatttaaacctttt 50317113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 8322578 - 8322524
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| |||||| |||||||||||| |||||||||||||||||||    
T  8322578 tacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaa 8322524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 31810046 - 31809992
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| |||||| |||||||||||| |||||||||||||||||||    
T  31810046 tacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaa 31809992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 50315375 - 50315321
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||| || |||||||||||| ||||||||||||| |||||||||||||||||||    
T  50315375 tacagagacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 50315321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 22684150 - 22684203
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatt 89  Q
    |||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  22684150 gatacatggacgaaaaccaaaaacacgcgaacttacaaggaccttttacatatt 22684203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 24437133 - 24437077
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||| || |||||| ||||| ||||||||||||| |||||||||||||||||||    
T  24437133 gatacagtgacgaaaacaaaaaacacgcgaacttacagggaccttttacatatttaa 24437077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 46604497 - 46604442
Alignment:
Q  37 atacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||| ||| |||||||||||| |||| |||||||| |||||||||||||||||||    
T  46604497 atacaaggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaa 46604442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 10708077 - 10708033
Alignment:
Q  48 aaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||||    
T  10708077 aaaaccaaaaacacgcgaacttacagggactttttacatatttaa 10708033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 14095776 - 14095720
Alignment:
Q  37 atacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaa 93  Q
    ||||| ||| |||||  ||||| ||||||||||||||| ||||||||||||||||||    
T  14095776 atacatggacgaaaataaaaaacacgcgaacttacatgaaccttttacatatttaaa 14095720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 31027284 - 31027228
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||| || ||||| |||||| |  ||||||||||||||||||||||||||||||    
T  31027284 gatacagagaagaaaagcaaaaacatacgaacttacatggaccttttacatatttaa 31027228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 44268947 - 44268891
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||| ||| ||||||||||| ||||||||||||| ||||  |||||||||||||    
T  44268947 gatacagagataaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 44268891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 12097941 - 12097996
Alignment:
Q  37 atacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||  |||||||||||| |||||||||||  ||||||||||| |||||||    
T  12097941 atacagggactaaaaccaaaaatgcgcgaacttacggggaccttttacttatttaa 12097996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 9627583 - 9627637
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||| | |||||| |||||| ||||||||||||  ||||||||||||||||||    
T  9627583 tacaggaacgaaaacaaaaaatgcgcgaacttacagagaccttttacatatttaa 9627637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 24438948 - 24439002
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatattt 90  Q
    |||||||||| |||||||||||| ||||||| ||||| ||||  |||||||||||    
T  24438948 gatacagggacgaaaaccaaaaacacgcgaatttacagggacgatttacatattt 24439002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 28251988 - 28251934
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| ||||||||||||| ||| || ||||| ||||||||| |||||||||    
T  28251988 tacagggacgaaaaccaaaaatgcgctaaattacagggaccttttgcatatttaa 28251934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 42301622 - 42301676
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||| ||| |||||| ||||||||||||||||| | | |||||||||||||||||    
T  42301622 tacaaggacgaaaacaaaaaatacgcgaacttagaggaaccttttacatatttaa 42301676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 52793761 - 52793707
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| ||||||  ||||||||||| |||||||| ||||||||||    
T  52793761 tacagggacgaaaacaaaaaatgagcgaacttacagggacctttaacatatttaa 52793707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 40767674 - 40767617
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaa 93  Q
    ||||||||||  |||||||||||  ||| ||||||||  |||||||||||||||||||    
T  40767674 gatacagggactaaaaccaaaaacgcgcaaacttacagagaccttttacatatttaaa 40767617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 7184382 - 7184326
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||| || |||||||||||| ||||||||||||| | ||  |||||||||||||    
T  7184382 gatacagagacgaaaaccaaaaacacgcgaacttacaagaacaatttacatatttaa 7184326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 7653745 - 7653689
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||| |||||||||| || ||||| ||||  |||||||||||||    
T  7653745 gatacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaa 7653689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 9419830 - 9419874
Alignment:
Q  48 aaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||| |||||| |||| |||||||| |||||||||||||||||||    
T  9419830 aaaagcaaaaacacgccaacttacaaggaccttttacatatttaa 9419874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 16592080 - 16592024
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||    
T  16592080 gatacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaa 16592024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 16673256 - 16673312
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||    
T  16673256 gatacagggacgaaaaccaaaaacacgcaaaattacagggacgatttacatatttaa 16673312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 31321068 - 31321032
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttaca 72  Q
    |||||||||| |||||||||||| |||||||||||||    
T  31321068 gatacagggacgaaaaccaaaaacacgcgaacttaca 31321032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 33259372 - 33259428
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||    
T  33259372 gatacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaa 33259428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 33279531 - 33279587
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||    
T  33279531 gatacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaa 33279587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 36145403 - 36145347
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||| |||||||||| || ||||| ||||  |||||||||||||    
T  36145403 gatacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaa 36145347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 4259 - 4313
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  4259 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 358034 - 357980
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  358034 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 357980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 359318 - 359370
Alignment:
Q  40 cagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||| |||||| |||||| |||||||||||| |||||||||||||||||||    
T  359318 cagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaa 359370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 3158037 - 3158093
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| ||||||||||||| ||||  |||||||||||||    
T  3158037 gatacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 3158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 39884675 - 39884619
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||  ||||||||||| ||||||||||||| ||||| |||||||||||||    
T  39884675 gatacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaa 39884619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 39886076 - 39886132
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||  ||||||||||| ||||||||||||| ||||| |||||||||||||    
T  39886076 gatacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaa 39886132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 21142536 - 21142482
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||| ||| |||||| |||||| |||||||||||| |||||||||||||||||||    
T  21142536 tacaaggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaa 21142482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 45448503 - 45448548
Alignment:
Q  47 gaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||||| ||||||||||| | |||||||||||||||||||    
T  45448503 gaaaaccaaaaacacgcgaacttagagggaccttttacatatttaa 45448548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 17707450 - 17707504
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||  ||||||||||| |||| || ||||||||||| |||||||||||||    
T  17707450 tacagggactaaaaccaaaaacacgctaaattacatggaccatttacatatttaa 17707504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 27411242 - 27411296
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||| ||||||| |||| ||| || ||||| |||||||||||||||||||    
T  27411242 tacagggataaaaaccataaatgcgctaaattacagggaccttttacatatttaa 27411296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 36899955 - 36899901
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||  ||||||||||| |||| || ||||| |||||||||||||||||||    
T  36899955 tacagggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaa 36899901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 15279644 - 15279689
Alignment:
Q  47 gaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||||| ||||||||||||| ||||  |||||||||||||    
T  15279644 gaaaaccaaaaacacgcgaacttacaaggacgatttacatatttaa 15279689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 15460013 - 15460058
Alignment:
Q  47 gaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||||| ||||||||||||| ||||  |||||||||||||    
T  15460013 gaaaaccaaaaacacgcgaacttacaaggacgatttacatatttaa 15460058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 17706212 - 17706168
Alignment:
Q  48 aaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||| |||| || ||||| |||||||||||||||||||    
T  17706212 aaaaccaaaaacacgctaaattacagggaccttttacatatttaa 17706168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 44690079 - 44690023
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||| |||| ||||||||  | |||||||  |||||||||||||||||||    
T  44690079 gatacagggattaaaagcaaaaatagtccaacttactaggaccttttacatatttaa 44690023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 11065656 - 11065710
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  11065656 tacagggacgaaaaccaaaaatgcgcgaacttacaaggaccttttacatatttaa 11065710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 843533 - 843577
Alignment:
Q  48 aaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||||| |||||||||||| |||||||||||||||||||    
T  843533 aaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 843577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 1443475 - 1443420
Alignment:
Q  37 atacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||| |||||||||||| ||| ||||||||| |||||||| ||||||||||    
T  1443475 atacagggacgaaaaccaaaaacacgtgaacttacagggacctttcacatatttaa 1443420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 30321166 - 30321221
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaa 93  Q
    |||||||| ||||||||||||| | ||||||||||  |||||||||||||||||||    
T  30321166 tacagggacgaaaaccaaaaatgcacgaacttacagagaccttttacatatttaaa 30321221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 842243 - 842189
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| |||||| |||||||||||| ||||||| |||||||||||    
T  842243 tacagggacgaaaacaaaaaatgcgcgaacttacagggaccttatacatatttaa 842189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 7796806 - 7796752
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||  |||||||||||| |||||||||||  |||||||||||||||||||    
T  7796806 tacagggacaaaaaccaaaaatgcgcgaacttactgggaccttttacatatttaa 7796752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 19402124 - 19402178
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| ||||||  ||||||||||| |||||||||||||||||||    
T  19402124 tacagggacgaaaacaaaaaatgtgcgaacttacaaggaccttttacatatttaa 19402178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 20773443 - 20773497
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||||||| |||||| ||| |||||| |  ||||||||||||||||||    
T  20773443 tacagggatgaaaacaaaaaatgcgcaaacttatagagaccttttacatatttaa 20773497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 1256773 - 1256717
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||    
T  1256773 gatacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaa 1256717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 1258440 - 1258496
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||    
T  1258440 gatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 1258496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 19597989 - 19598033
Alignment:
Q  48 aaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||||| |||| ||||||| ||||| |||||||||||||    
T  19597989 aaaaccaaaaatgcgcggacttacagggaccatttacatatttaa 19598033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 4906186 - 4906132
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  4906186 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4906132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 4932055 - 4932001
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  4932055 tacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4932001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 23703865 - 23703919
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||||||||||||||| |||||||||| | |||||||||||||||||||    
T  23703865 tacagggatgaaaaccaaaaatgcgcgaacttagagggaccttttacatatttaa 23703919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 4907465 - 4907517
Alignment:
Q  40 cagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  4907465 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4907517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 4933335 - 4933387
Alignment:
Q  40 cagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  4933335 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4933387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 29756327 - 29756275
Alignment:
Q  40 cagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  29756327 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 29756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 33609344 - 33609400
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||| ||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  33609344 gatacaaggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 33609400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 35786682 - 35786742
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaatcttt 98  Q
    |||| ||| ||||||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  35786682 tacaaggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaagtcttt 35786742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 33607527 - 33607464
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaatctttt 99  Q
    |||||| ||| |||||||||||| |||||||||||||  ||||||||||||||||||| |||||    
T  33607527 gatacaaggacgaaaaccaaaaacacgcgaacttacagagaccttttacatatttaaacctttt 33607464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 22309138 - 22309196
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaat 94  Q
    ||||||||||  ||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  22309138 gatacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaaat 22309196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 29757610 - 29757664
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| ||||||||||||| || ||||||||| |||||||||||||||||||    
T  29757610 tacagggacgaaaaccaaaaatgcgtgaacttacagggaccttttacatatttaa 29757664  T

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Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 35785222 - 35785168
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||  ||||| ||||||||||||||||||||||| |||||||||||||||    
T  35785222 tacagggacaaaaacaaaaaatacgcgaacttacatggatcttttacatatttaa 35785168  T

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Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 54535034 - 54534980
Alignment:
Q  39 acagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaa 93  Q
    ||||||| |||||||||||| ||||||||||||||||||  ||||||||||||||    
T  54535034 acagggacgaaaaccaaaaacacgcgaacttacatggacgatttacatatttaaa 54534980  T

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Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 23702451 - 23702400
Alignment:
Q  41 agggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||| |||||| |||||| |||||||||||| |||||||||||||||||||    
T  23702451 agggacgaaaacaaaaaatgcgcgaacttacaaggaccttttacatatttaa 23702400  T

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Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 38157077 - 38157016
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaatctttt 99  Q
    |||||||| |||||||||||| ||||||||||||| |||   |||||||||||||| |||||    
T  38157077 tacagggacgaaaaccaaaaacacgcgaacttacagggatgatttacatatttaaacctttt 38157016  T

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Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 2671600 - 2671544
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||  |||||||||||| |||||||||||| ||||||||| | |||||||    
T  2671600 gatacagggactaaaaccaaaaatgcgcgaacttacagggacctttttcttatttaa 2671544  T

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Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 22307730 - 22307674
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||||||||  ||||||||||| | ||||||||||| ||||||||| |||||||||    
T  22307730 gatacagggactaaaaccaaaaacatgcgaacttacagggaccttttgcatatttaa 22307674  T

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Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 22674209 - 22674149
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaatcttt 98  Q
    |||| ||| |||||| |||||| |||||||||| | ||||||||||||||||||| |||||    
T  22674209 tacaaggacgaaaacaaaaaatgcgcgaacttatagggaccttttacatatttaagtcttt 22674149  T

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Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 39665319 - 39665273
Alignment:
Q  47 gaaaaccaaaaatacgcgaacttacatggaccttttacatatttaaa 93  Q
    |||||| |||||| |||||||||||| ||||| ||||||||||||||    
T  39665319 gaaaacaaaaaatgcgcgaacttacagggaccatttacatatttaaa 39665273  T

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Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 55019359 - 55019413
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||| |||||| |||||| |||||| ||||| ||||| |||||||||||||    
T  55019359 tacagggaagaaaacaaaaaatgcgcgaaattacaaggaccatttacatatttaa 55019413  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 21354776 - 21354833
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaa-cttacatggaccttttacatatttaa 92  Q
    |||||||||| ||||| |||||| ||||||| |||||| ||| |||||||||||||||    
T  21354776 gatacagggacgaaaatcaaaaacacgcgaaacttacagggatcttttacatatttaa 21354833  T

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Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 19994557 - 19994501
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||    
T  19994557 gatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 19994501  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 28426881 - 28426837
Alignment:
Q  48 aaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    ||||| |||||| ||| |||||||||||||||||||| |||||||    
T  28426881 aaaacaaaaaatgcgccaacttacatggaccttttacttatttaa 28426837  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 32082633 - 32082689
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||    
T  32082633 gatacagggacgaaaaccaaaaacacgccaaattacacggacgatttacatatttaa 32082689  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 42977257 - 42977201
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||    
T  42977257 gatacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaa 42977201  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 42978919 - 42978975
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||    
T  42978919 gatacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaa 42978975  T

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Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 48713462 - 48713518
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||    
T  48713462 gatacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 48713518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 55947419 - 55947363
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| ||||||||||||||||  || ||||| ||||  |||||||||||||    
T  55947419 gatacagggacgaaaaccaaaaatacgtcaaattacagggacgatttacatatttaa 55947363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 55948953 - 55949009
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| |||| || ||||| ||||  |||||||||||||    
T  55948953 gatacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaa 55949009  T

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Target: scaffold0280 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 12190 - 12134
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| |||||||||||| ||||||||||||  | |||||||||||||||||    
T  12190 gatacagggacgaaaaccaaaaacacgcgaacttaccggaaccttttacatatttaa 12134  T

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Target: scaffold1118 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1118
Description:

Target: scaffold1118; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 2471 - 2420
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacata 87  Q
    |||| ||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  2471 gatatagggacgaaaaccaaaaacacgcgaacttacagggaccttttacata 2420  T

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Target: scaffold1176 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 2110 - 2054
Alignment:
Q  36 gatacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||||||| | |||||||||| ||||||||||||| |||| |||| |||||||||    
T  2110 gatacagggacggaaaccaaaaacacgcgaacttacaaggacatttttcatatttaa 2054  T

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Target: scaffold0060 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 13253 - 13307
Alignment:
Q  38 tacagggatgaaaaccaaaaatacgcgaacttacatggaccttttacatatttaa 92  Q
    |||||| | |||||| |||||| || ||||||||| |||||||||||||||||||    
T  13253 tacaggaacgaaaacaaaaaatgcgtgaacttacagggaccttttacatatttaa 13307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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