View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18745_low_5 (Length: 294)
Name: NF18745_low_5
Description: NF18745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18745_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 5 - 279
Target Start/End: Complemental strand, 48487430 - 48487156
Alignment:
| Q |
5 |
aattagatttgtaaataagggaaaggaaaacaaacgcgatccgaaaaaagagagtgataatggttttgatgaatttgattatgagaagcatgctaagtcg |
104 |
Q |
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| T |
48487430 |
aattagatttgtaaataagggaaaggaaaacaaatgcgatccgaaaaaagagagtgataatggttttgatgaatttgattatgagaagcatgctaagtcg |
48487331 |
T |
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| Q |
105 |
tttaagagcattaaaaagacggttaaagggagtcgtatgttattggttaaagtggagagtggaaattgttttgatgaaaagggtaaaaaagggaaagaga |
204 |
Q |
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| T |
48487330 |
tttaagagcattaaaaagacggttaaagggagtcgaatgttattggttaaagcggagagtggaaattgttttgatgaaaagggtaaaaaagggaaagaga |
48487231 |
T |
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| Q |
205 |
ttttcaaactagtggattttcatttgggtgatattgtttgggcaaaatgtggcaagacttttccggcatggcctg |
279 |
Q |
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| T |
48487230 |
ttttcaaactagtggattttcatttgggtgatattgtttgggcaaaatgtggcaagacttttccggcatggcctg |
48487156 |
T |
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