View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18745_low_9 (Length: 249)
Name: NF18745_low_9
Description: NF18745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18745_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 12 - 238
Target Start/End: Complemental strand, 11313279 - 11313053
Alignment:
| Q |
12 |
catcaaatcattccaccaatgttcaagttttatctccatgaaactgagcacaaacaatttcatattgtggcgtaatcaaatcacacccttagttcgaagt |
111 |
Q |
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| T |
11313279 |
catccaatcatttcaccaatgttcaagttttatctccatgaaactgagcacaaacaatttcatattgtggcgtaatcaaatcacacccttagttcgaagt |
11313180 |
T |
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| Q |
112 |
ctcggtgttcttcaccatctattgagtgaagaaaaaccagaaaaggaagtcaagggtgccacgagtgaaaagagtccaaatccgaactattcaaagtgga |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
11313179 |
ctcggtgttcttcaccatctattgagtgaagaaaaaccagaagaggaagtcaagggtgccacgggtgaaaagagtccaaatccgaactattcaaagtgga |
11313080 |
T |
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| Q |
212 |
tcaccaatgatggtctcctatgttcat |
238 |
Q |
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||||||||||||||||||||||||||| |
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| T |
11313079 |
tcaccaatgatggtctcctatgttcat |
11313053 |
T |
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