View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18746_low_10 (Length: 279)
Name: NF18746_low_10
Description: NF18746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18746_low_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 56 - 279
Target Start/End: Original strand, 12870112 - 12870335
Alignment:
| Q |
56 |
tccactagtgtgcaagagtgaaaaccttgttgtgttagggttctcaaatatgaagaatcaacaatctgaacaaaatcaaactcaattacaccataacaaa |
155 |
Q |
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| T |
12870112 |
tccactagtgtgcaagagtgaaaaccttgctgtgttagggttctcaaatatgaagaatcaacaatctgaacaaaatcaaactcaattacaccataacgaa |
12870211 |
T |
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| Q |
156 |
gaagatgaagaagaacacaacaacatagaacaaagtagtagcaaatccccttctccaccactccattcactctccgactcaccaatctccgacgatcacc |
255 |
Q |
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| T |
12870212 |
gaagatgaagaagaacacaacaacatagaacaaagtagtagcaaatccccttcaccaccactccattcactctccgactcaccaatctccgacgatcacc |
12870311 |
T |
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| Q |
256 |
gctccctccctctagtcctcgtgc |
279 |
Q |
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| T |
12870312 |
gctccctccctctagtcctcgtgc |
12870335 |
T |
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