View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18747_low_26 (Length: 348)
Name: NF18747_low_26
Description: NF18747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18747_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 45 - 331
Target Start/End: Original strand, 12813701 - 12813987
Alignment:
| Q |
45 |
acattccattttaaccctatcttctaaacataaaatannnnnnnggatcaatgtcatgaaatattaaccctctcactccttcttctaagaaaattttgac |
144 |
Q |
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| T |
12813701 |
acattccattttaaccctatcttctaaacataaaatatttttttggatcaatgtcatgaaatattaaccctctcactccttcttctaagaaaattttgac |
12813800 |
T |
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| Q |
145 |
aaaggtcatatatagtgcatggttagaacgtgttgaaaaacaaaacgccctctttatagaaactgataggtacttataatctaatcatgctctgcaaatc |
244 |
Q |
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| T |
12813801 |
aaaggtcatatatagtgcatggttagaacgtgttgaaaaacaaaacgccccctttatagaaactgataggtacttataatctaatcatgctctgcaaatc |
12813900 |
T |
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| Q |
245 |
taatatgtattacaacattcctcaaattttcagttctctttattttattttacgaatcctttgaattgcacttttcatactccttat |
331 |
Q |
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| T |
12813901 |
tattatgtattacaacattcctcaaattttcagttctctttattttattttacgaatcctttgaattgcacttttcatactccttat |
12813987 |
T |
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