View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18747_low_36 (Length: 296)
Name: NF18747_low_36
Description: NF18747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18747_low_36 |
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Alignment Details
Target: chr4 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 8 - 278
Target Start/End: Original strand, 9503186 - 9503456
Alignment:
| Q |
8 |
tcaaaggtacaatttatgttaccaataactggtgacaactatcatgatgttccaacgttgaataattttgttatatcagagtagaaataactggactgga |
107 |
Q |
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| T |
9503186 |
tcaaaggtacaatttatgttaccaataactggtgacaactatcatgatgttccaacgttgaataattttgttatatcagaatagaaataactggactgga |
9503285 |
T |
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| Q |
108 |
ggggcatgatagcctgtcactttttatttgaaattgaagatactgattttttgttgaggatcttgcccaatgttataaaacctagaccggtcattgactt |
207 |
Q |
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| T |
9503286 |
ggggcatgatagcctgtcactttttatttgaaattgaggatactgattttttgttgaggatcttgcccaatgttataaaatctagaccggtcattgactt |
9503385 |
T |
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| Q |
208 |
gtcaagacatttgatcaatggcacttattaaattggttgaatcctgtaaaccaaaatttagattaaaataa |
278 |
Q |
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| T |
9503386 |
gtcaagacatttgatcaatggcacttattaaattggttgaatcctgtaaaccaaaatttatattaaaataa |
9503456 |
T |
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