View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18749_low_32 (Length: 233)
Name: NF18749_low_32
Description: NF18749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18749_low_32 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 17 - 218
Target Start/End: Original strand, 32096319 - 32096520
Alignment:
| Q |
17 |
aagattgaactccaataacctcaatcctcaactccctcaacattaccataacatcaagcaacaatccttctctatgcaaacactcaatctccaacaaagc |
116 |
Q |
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| T |
32096319 |
aagattgaactccaataacctcaatcctcaactccctcaacattaccataacgtcaagcaacaatccttctctatgcaaacactcaatctccaacaaagc |
32096418 |
T |
|
| Q |
117 |
atcactctcaataatcgaaacctgaaccgacgaaacaacctccgtctcaactgctttcgctctcgtggctccacactcttccacaatcctcacctttttc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32096419 |
atcactctcaataatcgaaacctgaaccgacgaaacaacctccgtctcaactgctttcgctctcgtggctccacactcttccacaatcctcacctttttc |
32096518 |
T |
|
| Q |
217 |
tt |
218 |
Q |
| |
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|| |
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|
| T |
32096519 |
tt |
32096520 |
T |
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