View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18751_high_3 (Length: 644)

Name: NF18751_high_3
Description: NF18751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18751_high_3
NF18751_high_3
[»] chr1 (36 HSPs)
chr1 (122-305)||(42843701-42843884)
chr1 (464-640)||(42844721-42844897)
chr1 (18-101)||(42843549-42843632)
chr1 (297-434)||(42844709-42844852)
chr1 (564-640)||(42845027-42845103)
chr1 (549-640)||(10017319-10017410)
chr1 (570-643)||(29413161-29413234)
chr1 (563-643)||(29413367-29413447)
chr1 (548-640)||(38871145-38871237)
chr1 (548-638)||(38870939-38871029)
chr1 (548-637)||(20428964-20429053)
chr1 (563-640)||(22826751-22826827)
chr1 (548-640)||(5222716-5222808)
chr1 (548-640)||(13959424-13959516)
chr1 (580-640)||(47086299-47086359)
chr1 (549-638)||(20429226-20429315)
chr1 (550-630)||(6237961-6238040)
chr1 (548-632)||(10017165-10017249)
chr1 (548-632)||(17419817-17419901)
chr1 (548-632)||(33879768-33879852)
chr1 (548-632)||(33964403-33964487)
chr1 (548-628)||(45403474-45403554)
chr1 (578-637)||(19863167-19863226)
chr1 (54-89)||(42843525-42843560)
chr1 (548-638)||(28119732-28119822)
chr1 (548-629)||(21638256-21638337)
chr1 (563-640)||(40196847-40196923)
chr1 (548-632)||(2697321-2697405)
chr1 (564-640)||(6238344-6238419)
chr1 (548-632)||(8520083-8520167)
chr1 (548-640)||(20735544-20735636)
chr1 (548-640)||(21428048-21428140)
chr1 (576-640)||(35892043-35892107)
chr1 (564-640)||(37600894-37600970)
chr1 (548-632)||(41812648-41812732)
chr1 (548-632)||(43361747-43361831)
[»] chr4 (30 HSPs)
chr4 (548-641)||(56511318-56511411)
chr4 (548-640)||(53863927-53864019)
chr4 (548-641)||(56511525-56511618)
chr4 (548-644)||(52214633-52214729)
chr4 (548-640)||(10390465-10390557)
chr4 (548-640)||(22865791-22865883)
chr4 (550-640)||(14945165-14945255)
chr4 (550-640)||(3640228-3640317)
chr4 (550-640)||(41743558-41743647)
chr4 (564-637)||(20093357-20093430)
chr4 (548-640)||(991226-991318)
chr4 (548-604)||(10390285-10390341)
chr4 (548-632)||(15665183-15665267)
chr4 (548-640)||(29113471-29113563)
chr4 (548-640)||(53740204-53740296)
chr4 (565-640)||(9758326-9758400)
chr4 (565-640)||(14115753-14115827)
chr4 (563-640)||(34205998-34206076)
chr4 (570-640)||(50307298-50307368)
chr4 (548-637)||(5488392-5488481)
chr4 (548-625)||(9938486-9938563)
chr4 (563-640)||(14115497-14115573)
chr4 (547-640)||(45426925-45427018)
chr4 (548-633)||(45427242-45427327)
chr4 (548-640)||(990569-990661)
chr4 (576-632)||(8902387-8902443)
chr4 (386-434)||(22865836-22865884)
chr4 (548-632)||(29669353-29669437)
chr4 (548-632)||(29669668-29669752)
chr4 (548-624)||(53386102-53386178)
[»] chr3 (33 HSPs)
chr3 (548-641)||(35011678-35011771)
chr3 (548-641)||(35011885-35011978)
chr3 (548-640)||(29763686-29763778)
chr3 (548-640)||(50203847-50203939)
chr3 (550-640)||(26926929-26927018)
chr3 (542-640)||(31801752-31801850)
chr3 (550-640)||(32034113-32034202)
chr3 (550-640)||(40926803-40926892)
chr3 (548-637)||(19820518-19820607)
chr3 (548-640)||(4029634-4029726)
chr3 (578-640)||(39269522-39269584)
chr3 (548-637)||(11414388-11414477)
chr3 (550-639)||(37039976-37040064)
chr3 (559-640)||(40927052-40927132)
chr3 (560-604)||(1715599-1715643)
chr3 (548-640)||(44461310-44461402)
chr3 (548-640)||(50338372-50338464)
chr3 (550-637)||(39269070-39269156)
chr3 (548-643)||(44461057-44461152)
chr3 (563-637)||(16060890-16060964)
chr3 (550-640)||(19984644-19984733)
chr3 (386-432)||(29763685-29763731)
chr3 (550-640)||(40926476-40926565)
chr3 (550-640)||(44367601-44367690)
chr3 (563-632)||(13769296-13769365)
chr3 (387-432)||(31801799-31801844)
chr3 (559-628)||(33799153-33799222)
chr3 (548-633)||(44573965-44574050)
chr3 (563-640)||(53761403-53761480)
chr3 (560-640)||(44145123-44145203)
chr3 (548-640)||(44573348-44573440)
chr3 (548-640)||(44573661-44573753)
chr3 (548-632)||(50692556-50692640)
[»] chr2 (20 HSPs)
chr2 (550-640)||(39386692-39386782)
chr2 (548-640)||(6183356-6183448)
chr2 (550-640)||(29676316-29676406)
chr2 (563-640)||(8044550-8044628)
chr2 (563-632)||(10542068-10542137)
chr2 (548-597)||(22447165-22447214)
chr2 (549-629)||(10429772-10429852)
chr2 (560-640)||(27545118-27545198)
chr2 (548-640)||(43195806-43195898)
chr2 (563-637)||(10536934-10537008)
chr2 (550-640)||(11969074-11969164)
chr2 (563-640)||(3435491-3435568)
chr2 (563-640)||(3976476-3976553)
chr2 (564-625)||(41002270-41002331)
chr2 (563-631)||(10849496-10849564)
chr2 (548-640)||(12431920-12432012)
chr2 (560-640)||(17265219-17265299)
chr2 (548-632)||(21214191-21214275)
chr2 (548-640)||(32667205-32667297)
chr2 (548-632)||(42768324-42768408)
[»] chr7 (24 HSPs)
chr7 (548-640)||(16564916-16565008)
chr7 (548-640)||(16600654-16600746)
chr7 (550-640)||(5266381-5266471)
chr7 (548-640)||(31357664-31357757)
chr7 (548-640)||(33855713-33855805)
chr7 (550-640)||(33833972-33834061)
chr7 (548-640)||(4257990-4258082)
chr7 (548-640)||(16565120-16565212)
chr7 (548-640)||(16600450-16600542)
chr7 (564-632)||(34590558-34590626)
chr7 (578-640)||(33834177-33834239)
chr7 (560-630)||(36092601-36092671)
chr7 (570-640)||(41670605-41670675)
chr7 (563-640)||(7832968-7833045)
chr7 (550-639)||(38948406-38948494)
chr7 (563-632)||(40137701-40137770)
chr7 (563-640)||(29646086-29646162)
chr7 (563-632)||(37272050-37272119)
chr7 (563-640)||(47855996-47856073)
chr7 (548-640)||(1661181-1661273)
chr7 (548-640)||(6783060-6783152)
chr7 (548-640)||(23396631-23396723)
chr7 (564-640)||(40121624-40121700)
chr7 (564-632)||(43167899-43167967)
[»] chr8 (19 HSPs)
chr8 (548-640)||(33435905-33435997)
chr8 (548-644)||(36997184-36997280)
chr8 (550-637)||(16051247-16051333)
chr8 (550-640)||(43901010-43901099)
chr8 (548-604)||(30066040-30066096)
chr8 (578-640)||(3895153-3895215)
chr8 (548-629)||(7621927-7622008)
chr8 (548-632)||(20760650-20760734)
chr8 (548-632)||(36039784-36039868)
chr8 (563-638)||(15968070-15968144)
chr8 (549-632)||(36037220-36037303)
chr8 (563-640)||(21653349-21653426)
chr8 (563-632)||(34248107-34248176)
chr8 (563-632)||(34248389-34248458)
chr8 (548-632)||(18905886-18905970)
chr8 (548-640)||(20298506-20298598)
chr8 (548-632)||(21085138-21085222)
chr8 (548-632)||(40902383-40902467)
chr8 (548-640)||(43599333-43599425)
[»] chr6 (17 HSPs)
chr6 (548-640)||(26098364-26098456)
chr6 (548-638)||(25999047-25999137)
chr6 (548-638)||(26098778-26098868)
chr6 (548-640)||(19054515-19054607)
chr6 (548-640)||(25998839-25998931)
chr6 (548-638)||(26098572-26098662)
chr6 (550-639)||(10733430-10733519)
chr6 (563-640)||(19291923-19292000)
chr6 (548-640)||(1744832-1744924)
chr6 (548-632)||(12134473-12134557)
chr6 (548-640)||(24558810-24558902)
chr6 (548-640)||(28149815-28149907)
chr6 (570-640)||(30539257-30539327)
chr6 (548-640)||(5269263-5269355)
chr6 (548-632)||(24055099-24055183)
chr6 (548-640)||(30539442-30539534)
chr6 (547-639)||(31728988-31729080)
[»] chr5 (20 HSPs)
chr5 (548-640)||(13844035-13844127)
chr5 (549-640)||(39268248-39268339)
chr5 (563-640)||(2716365-2716442)
chr5 (573-640)||(10668382-10668449)
chr5 (548-640)||(39268040-39268136)
chr5 (560-638)||(18107857-18107935)
chr5 (563-632)||(29432442-29432511)
chr5 (548-632)||(34457333-34457417)
chr5 (560-603)||(36882407-36882450)
chr5 (550-640)||(18873187-18873276)
chr5 (563-632)||(2716576-2716645)
chr5 (563-640)||(38376753-38376830)
chr5 (548-632)||(873686-873770)
chr5 (564-632)||(4465191-4465259)
chr5 (548-632)||(11632461-11632545)
chr5 (548-640)||(13413606-13413698)
chr5 (548-640)||(13843719-13843811)
chr5 (548-632)||(34457126-34457210)
chr5 (548-632)||(38131794-38131878)
chr5 (548-640)||(40169031-40169123)
[»] scaffold1138 (1 HSPs)
scaffold1138 (543-640)||(1858-1955)
[»] scaffold0054 (1 HSPs)
scaffold0054 (548-632)||(21253-21337)


Alignment Details
Target: chr1 (Bit Score: 168; Significance: 1e-89; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 122 - 305
Target Start/End: Original strand, 42843701 - 42843884
Alignment:
Q  122 acgaacaaatctatttgcattgaaaagctttttccctccataattcttaaaaatcgtttctgtctgaattgacttacgggaaaaaagagtggtttatcct 221  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  42843701 acgaacaaatatatttgcattgaaaagctttttccctccataattcttaaaaatcgtttctgtctgaattgacttacgcgaaaaaatagtggtttatcct 42843800  T
Q  222 atttgaatgagtaacttaatatggaaacgatttttgagaaatcattgggaataaaagtaactatctttattatatttatttcaa 305  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42843801 atttgaatgagtaacttaatatgaaaacgatttttgagaaatcattgggaataaaagtaactatctttattatatttatttcaa 42843884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 464 - 640
Target Start/End: Original strand, 42844721 - 42844897
Alignment:
Q  464 tttaacattagcgagggcttaaaccagctatatattagatacaccttactgttgtgccaatttatatatgagcacaattatatcgttgaaatttaaggtc 563  Q
    ||||||||||| | ||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  42844721 tttaacattagggtgggcttaaacttgctatatgttagatacaccttactgttgtgccaatttatatatgagcacagctatatcgttgaaatttaaggtc 42844820  T
Q  564 taacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42844821 taacttatccttacaaaatcagttcataaggtgagaagtgtatcatctctataaactcttataaagagtattatcta 42844897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 42843549 - 42843632
Alignment:
Q  18 ggattaagaaattatgtgtcccagaccaacacacaagtttttgtaggaatagcaaatcctggattaagaaatgatgcgtctcaa 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42843549 ggattaagaaattatgtgtcccaaaccaacacacaagtttttgtaggaatagcaaatcctggattaagaaatgatgcgtctcaa 42843632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 297 - 434
Target Start/End: Original strand, 42844709 - 42844852
Alignment:
Q  297 ttatttcaaccctttaacattagtgagggcttatacctgctatatgttagattcactttaccgttgtgccaatttatatatgaacac------attgttg 390  Q
    ||||||||||| ||||||||||| | ||||||| || ||||||||||||||| ||| |||| ||||||||||||||||||||| |||      || ||||    
T  42844709 ttatttcaaccgtttaacattagggtgggcttaaacttgctatatgttagatacaccttactgttgtgccaatttatatatgagcacagctatatcgttg 42844808  T
Q  391 aaatttaaggtctaatttatccttacaaaaacagttcataaggt 434  Q
    ||||||||||||||| |||||||||||||| |||||||||||||    
T  42844809 aaatttaaggtctaacttatccttacaaaatcagttcataaggt 42844852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 640
Target Start/End: Original strand, 42845027 - 42845103
Alignment:
Q  564 taacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||| ||||||| ||||| |||||||||| ||||||||| ||| ||| |||||||||||||||||||| |||||||    
T  42845027 taactcatccttataaaactagttcataagatgagaagtgcatcctctttataaactcttatcaagagtcttatcta 42845103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 549 - 640
Target Start/End: Original strand, 10017319 - 10017410
Alignment:
Q  549 ttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||| || |||||||| || ||||||| | |||||||||||||| ||||  || ||| |||||||||||||||||||| |||||||    
T  10017319 ttgaaatttagggcctaacttagccgtacaaaatcggttcataaggtgaggagtgcttcctctttataaactcttatcaagagtcttatcta 10017410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 570 - 643
Target Start/End: Complemental strand, 29413234 - 29413161
Alignment:
Q  570 atccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatctaccc 643  Q
    |||||||||||||||| ||||||| |||  ||||| || ||| |||||||||||||||||||| ||||||||||    
T  29413234 atccttacaaaaccagctcataagatgaagagtgtttcctctttataaactcttatcaagagtcttatctaccc 29413161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 563 - 643
Target Start/End: Complemental strand, 29413447 - 29413367
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatctaccc 643  Q
    |||||| |||||||||||||  | |||||||||||| ||||  || ||| |||||||||||||||||||| ||||||||||    
T  29413447 ctaactcatccttacaaaactggctcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctaccc 29413367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 38871145 - 38871237
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||| ||| |||||  |||||||||||||| |||| ||||||||| ||||  || ||| |||||||| ||||||||||| |||||||    
T  38871145 gttgaaatttgaggcctaacgcatccttacaaaaccggttcttaaggtgaggagtgcctcctctttataaacttttatcaagagtcttatcta 38871237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 548 - 638
Target Start/End: Original strand, 38870939 - 38871029
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatc 638  Q
    |||||||||| ||| |||||| |||||||||||||| |||| ||||||||| ||||  ||  || |||||||| ||||||||||| |||||    
T  38870939 gttgaaatttgaggcctaactcatccttacaaaaccggttcttaaggtgaggagtgcctccactttataaacttttatcaagagtcttatc 38871029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 548 - 637
Target Start/End: Original strand, 20428964 - 20429053
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattat 637  Q
    |||||||||||||| |||||| |||  |||||||||  ||||||||||||||| ||  || ||| |||||||| ||||||||||| ||||    
T  20428964 gttgaaatttaaggcctaactcatctgtacaaaaccgattcataaggtgagaaatgcttcctctttataaactattatcaagagtcttat 20429053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 563 - 640
Target Start/End: Original strand, 22826751 - 22826827
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| ||||||| |||||| |||||||||||||| | ||| || ||| |||||||||||||||||||| |||||||    
T  22826751 ctaactgatcctta-aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatcta 22826827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 5222808 - 5222716
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||| ||||||||| ||||||| |||||| | |  ||||||||| | ||| || |||  ||||||||||||||||||| |||||||    
T  5222808 gttgaaatttagggtctaactcatccttataaaaccggcttgtaaggtgaggattgtctcctctacataaactcttatcaagagtcttatcta 5222716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 13959516 - 13959424
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| ||||||| |||||||| |  |||||||| || |||||| ||| ||||||||||| |||||||| |||||||    
T  13959516 gttgaaatttggggcctaactcatccttaaaaaaccagcttgtaaggtgaaaattgtatcctctttataaactcttctcaagagtcttatcta 13959424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 640
Target Start/End: Original strand, 47086299 - 47086359
Alignment:
Q  580 aaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||| |||||||||||||| ||||| |||| | |||||||||||||||||||| |||||||    
T  47086299 aaccggttcataaggtgaggagtgtctcatgtatataaactcttatcaagagtcttatcta 47086359  T

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Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 549 - 638
Target Start/End: Original strand, 20429226 - 20429315
Alignment:
Q  549 ttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatc 638  Q
    ||||||||||||| |||||| || | ||| ||||  |||||||||||||  ||||  || ||| |||||||||||||||||||| |||||    
T  20429226 ttgaaatttaaggcctaactcattcgtacgaaactggttcataaggtgatgagtgcttcctctttataaactcttatcaagagtcttatc 20429315  T

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Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 550 - 630
Target Start/End: Original strand, 6237961 - 6238040
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaaga 630  Q
    |||||||  ||| |||||| ||||||| |||||| |||||||||||||| | ||| || ||| ||||||||||||||||||    
T  6237961 tgaaattggaggcctaactcatcctta-aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaaga 6238040  T

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Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 10017165 - 10017249
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||| || |||||| |||| ||||||||| ||||||| |||| | | ||  || ||| ||||||||||||||||||||    
T  10017165 gttgaaatttagggcctaactcatccgtacaaaaccggttcatagggtggggaatgcttcctctttataaactcttatcaagagt 10017249  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 632
Target Start/End: Complemental strand, 17419901 - 17419817
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  ||||||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  17419901 gttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 17419817  T

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Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 33879768 - 33879852
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||||| |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  33879768 gttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagt 33879852  T

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Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 632
Target Start/End: Complemental strand, 33964487 - 33964403
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||||| |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  33964487 gttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagt 33964403  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 628
Target Start/End: Complemental strand, 45403554 - 45403474
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaa 628  Q
    |||||||||| ||| |||||| |||||||||||||||| |  ||||||||| ||||  || ||| ||||||||||| ||||    
T  45403554 gttgaaatttgaggcctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaa 45403474  T

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Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 578 - 637
Target Start/End: Complemental strand, 19863226 - 19863167
Alignment:
Q  578 aaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattat 637  Q
    ||||||||||||||||||||| | ||  || ||| |||||||||||||||||||| ||||    
T  19863226 aaaaccagttcataaggtgaggattgcttcctctatataaactcttatcaagagtcttat 19863167  T

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Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 42843525 - 42843560
Alignment:
Q  54 gtttttgtaggaatagcaaatcctggattaagaaat 89  Q
    |||| |||||||||||||||||||||||||||||||    
T  42843525 gtttgtgtaggaatagcaaatcctggattaagaaat 42843560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 548 - 638
Target Start/End: Original strand, 28119732 - 28119822
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatc 638  Q
    |||||||||| || | ||||| ||||||||||||    ||||||||||||||| ||  |  ||| |||||||||||||||||||| |||||    
T  28119732 gttgaaatttgagatttaactcatccttacaaaatagattcataaggtgagaaatggctactctttataaactcttatcaagagtcttatc 28119822  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 629
Target Start/End: Original strand, 21638256 - 21638337
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaag 629  Q
    ||||||||||  || |||||| |||||||||||||||  |  ||||||||| ||||| || ||| |||||||||| ||||||    
T  21638256 gttgaaatttggggcctaactcatccttacaaaaccatcttgtaaggtgaggagtgtctcctctttataaactctgatcaag 21638337  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 640
Target Start/End: Original strand, 40196847 - 40196923
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| ||||||| ||||||||||  ||| ||||| | ||| || ||| |||||||||||||||||||| |||||||    
T  40196847 ctaactcatcctta-aaaaccagtttctaaagtgaggattgtctcctctatataaactcttatcaagagtcttatcta 40196923  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 2697321 - 2697405
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  |||||||||  ||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  2697321 gttgaaatttggggtctaactcgtccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 2697405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 640
Target Start/End: Original strand, 6238344 - 6238419
Alignment:
Q  564 taacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||| ||||||| |||||| |||||||||||||| | ||  || ||| ||||||||||||||| |||| |||||||    
T  6238344 taactcatcctta-aaaaccggttcataaggtgaggattgcctcctctatataaactcttatcaggagtcttatcta 6238419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 8520083 - 8520167
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  ||||||||| ||| |||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  8520083 gttgaaatttggggtctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcttctttataaactcttctcaagagt 8520167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 20735636 - 20735544
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| |||||| |||| ||||||||| ||||||    
T  20735636 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaattcttctcaagagtactatcta 20735544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 21428048 - 21428140
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||| ||| |||||| ||||| |||||||| |||  |||||| || | |||  | | | |||||||||||||||||||| |||||||    
T  21428048 gttgaaatttgagggctaactcatcctcacaaaaccggtttgtaaggtaaggattgtcacctttatataaactcttatcaagagtcttatcta 21428140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 576 - 640
Target Start/End: Complemental strand, 35892107 - 35892043
Alignment:
Q  576 acaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||| |||| | |||||||||| ||||  || ||| |||||||||||||||||||| |||||||    
T  35892107 acaaatccagcttataaggtgaggagtgcctcctctttataaactcttatcaagagttttatcta 35892043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 640
Target Start/End: Complemental strand, 37600970 - 37600894
Alignment:
Q  564 taacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||| |||||||||||||| | | |||||||||| ||||   | ||| ||||||||||| |||||||| |||||||    
T  37600970 taactcatccttacaaaaccggcttataaggtgaggagtgccgcctctttataaactcttctcaagagtgttatcta 37600894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 41812648 - 41812732
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  ||||||||| ||||| ||||||||   |  ||| ||||||||||| || ||| |||||||||| |||||||||    
T  41812648 gttgaaatttcgggtctaactcatcctcacaaaaccgacttgtaaagtgagaagtgtctcctctttataaactctcatcaagagt 41812732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 43361747 - 43361831
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||| | ||||||||| |||||||||||||| | |  ||||||||| | ||  || ||| ||||||||||| ||||||||    
T  43361747 gttgaaattgagggtctaactcatccttacaaaaccggcttgtaaggtgaggattgcttcctctttataaactcttctcaagagt 43361831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 3e-19; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 548 - 641
Target Start/End: Complemental strand, 56511411 - 56511318
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatctac 641  Q
    ||||||||||  || |||||| |||||||||||||| |||||||||||||| ||||  || ||| |||||||||||||||||||| ||||||||    
T  56511411 gttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctac 56511318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 53864019 - 53863927
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  ||||||||| |||||||||||||| |||||||||||||| ||||| || ||| |||||||| ||||||| ||| |||||||    
T  53864019 gttgaaatttgtggtctaactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcaaaagtcttatcta 53863927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 548 - 641
Target Start/End: Complemental strand, 56511618 - 56511525
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatctac 641  Q
    ||||||||||  || |||||| |||||||||||| | |||||||||||||| ||||  || ||| |||||||||||||||||||| ||||||||    
T  56511618 gttgaaatttggggcctaactcatccttacaaaatcggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctac 56511525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 548 - 644
Target Start/End: Complemental strand, 52214729 - 52214633
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatctaccca 644  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||||||||||||||||||||||||    
T  52214729 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtattatctaccca 52214633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 10390465 - 10390557
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  ||||||||| |||||||||||||  |||||||||||||| | ||| || ||| |||||||| ||||||||||  |||||||    
T  10390465 gttgaaatttggggtctaactcatccttacaaaactggttcataaggtgaggaatgtctcctctttataaactattatcaagagacttatcta 10390557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 22865883 - 22865791
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||| ||||||||| |||||||||||||| |||||||||||||| | ||   | ||| |||||||| |||||||| || |||||||    
T  22865883 gttgaaatttagggtctaactcatccttacaaaaccggttcataaggtgaggactgccccctctttataaactattatcaagggtcttatcta 22865791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 640
Target Start/End: Complemental strand, 14945255 - 14945165
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||  |||||||||| |||||||||||||| |||||||||||||| | || ||| ||| |||||||||||   |||||| |||||||    
T  14945255 tgaaattggaggtctaactcatccttacaaaaccggttcataaggtgaggattgcatcctctatataaactctttcgaagagtcttatcta 14945165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 550 - 640
Target Start/End: Complemental strand, 3640317 - 3640228
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||  ||| |||||| ||||||| |||||| |||||||| ||||| | ||| || ||| |||||||||||||||||||| |||||||    
T  3640317 tgaaattagaggcctaactcatcctta-aaaaccggttcataaagtgaggattgtctcctctatataaactcttatcaagagtcttatcta 3640228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 550 - 640
Target Start/End: Complemental strand, 41743647 - 41743558
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||  ||| |||||| ||||||| |||||| |||||||||||||| | ||  || ||| |||||||||||||||||||| |||||||    
T  41743647 tgaaattggaggcctaactcatcctta-aaaaccggttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttatcta 41743558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 564 - 637
Target Start/End: Complemental strand, 20093430 - 20093357
Alignment:
Q  564 taacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattat 637  Q
    ||||| ||||||||||||||  || ||||||||||||||| ||  ||| |||||| ||||||||||||| ||||    
T  20093430 taactcatccttacaaaaccgatttataaggtgagaagtgcattctctttataaattcttatcaagagtcttat 20093357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 991318 - 991226
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  ||||||||| |||||||||||||| | |  ||||||||| ||||  || ||  ||||||||||| |||||||| |||||||    
T  991318 gttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctcattataaactcttctcaagagtgttatcta 991226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 604
Target Start/End: Original strand, 10390285 - 10390341
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgt 604  Q
    ||||||||||   |||||||| ||||||||||||| ||||||||||||||| |||||    
T  10390285 gttgaaatttggagtctaactcatccttacaaaactagttcataaggtgaggagtgt 10390341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 632
Target Start/End: Complemental strand, 15665267 - 15665183
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    |||||||||| ||| |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  15665267 gttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctatataaactcttctcaagagt 15665183  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 29113563 - 29113471
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||||| |  ||||||||| | ||  || ||| ||||||||||| |||||||| |||||||    
T  29113563 gttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 29113471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 53740296 - 53740204
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||| ||||||    
T  53740296 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 53740204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 565 - 640
Target Start/End: Complemental strand, 9758400 - 9758326
Alignment:
Q  565 aacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||||| |||||| |||| |||| |||||  ||| || ||| |||||||||||||||||||| |||||||    
T  9758400 aacttatcctta-aaaaccggttcttaagatgagagttgtctcctctatataaactcttatcaagagtcttatcta 9758326  T

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Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 565 - 640
Target Start/End: Original strand, 14115753 - 14115827
Alignment:
Q  565 aacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||| ||||||| |||||| |||||||||||||| | || ||| ||| ||||||||||||||||| || |||||||    
T  14115753 aactcatcctta-aaaaccggttcataaggtgaggattgcatcctctatataaactcttatcaagtgtcttatcta 14115827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 563 - 640
Target Start/End: Original strand, 34205998 - 34206076
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataa-actcttatcaagagtattatcta 640  Q
    |||||| |||||||||||||||| |  ||||||||| ||||  || ||| ||||| ||||||||||||||| |||||||    
T  34205998 ctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataagactcttatcaagagtcttatcta 34206076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 570 - 640
Target Start/End: Complemental strand, 50307368 - 50307298
Alignment:
Q  570 atccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||||||  |||||||||||||| ||||  ||  || ||||||||||| |||||||| |||||||    
T  50307368 atccttacaaaactggttcataaggtgaggagtgcctccgctttataaactcttgtcaagagtcttatcta 50307298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 637
Target Start/End: Complemental strand, 5488481 - 5488392
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattat 637  Q
    |||||||||| ||| |||||| |||||||||||||| | |  ||||||||| | ||  || ||| ||||||||||| |||||||| ||||    
T  5488481 gttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttat 5488392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 625
Target Start/End: Complemental strand, 9938563 - 9938486
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttat 625  Q
    ||||||||||   ||||||||||||||||||||||    | |||||||||||||||| ||  || |||||||||||||    
T  9938563 gttgaaattttgcgtctaacttatccttacaaaactgacttataaggtgagaagtgtctcccctttataaactcttat 9938486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 640
Target Start/End: Original strand, 14115497 - 14115573
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| ||||||| |||||  ||||||||||| || | ||| || ||| |||||||||||||||||||| |||||||    
T  14115497 ctaactcatcctta-aaaacaggttcataaggtaaggattgtctcctctatataaactcttatcaagagtcttatcta 14115573  T

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Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 640
Target Start/End: Original strand, 45426925 - 45427018
Alignment:
Q  547 cgttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||||  || |||||| ||||||||||||||   |  ||||||||| ||||  || ||| ||||||||||| ||||||||| ||||||    
T  45426925 cgttgaaatttggggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 45427018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 633
Target Start/End: Original strand, 45427242 - 45427327
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagta 633  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| |||||||||    
T  45427242 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagta 45427327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 990661 - 990569
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| ||||||||||||||   |  ||||||||| ||||  || ||| ||||||||||| |||||||| |||||||    
T  990661 gttgaaatttggggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgttatcta 990569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 576 - 632
Target Start/End: Complemental strand, 8902443 - 8902387
Alignment:
Q  576 acaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||| || | |||| ||||| ||||| |||||| ||||||||||||||||||||    
T  8902443 acaaaactagcttataaagtgaggagtgtctcatctttataaactcttatcaagagt 8902387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 22865884 - 22865836
Alignment:
Q  386 tgttgaaatttaaggtctaatttatccttacaaaaacagttcataaggt 434  Q
    |||||||||||| ||||||| | |||||||||||| | |||||||||||    
T  22865884 tgttgaaatttagggtctaactcatccttacaaaaccggttcataaggt 22865836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 29669353 - 29669437
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  29669353 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 29669437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 29669668 - 29669752
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  ||| ||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  29669668 gttgaaatttggggtttaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 29669752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 624
Target Start/End: Original strand, 53386102 - 53386178
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactctta 624  Q
    |||||||||| |||||||||| ||||||||||||||   |  ||||||||| | ||| || ||| ||||||||||||    
T  53386102 gttgaaatttgaggtctaactcatccttacaaaaccgacttgtaaggtgaggaatgtctcctctttataaactctta 53386178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 3e-19; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 548 - 641
Target Start/End: Complemental strand, 35011771 - 35011678
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatctac 641  Q
    ||||||||||  || |||||| |||||||||||||| |||||||||||||| ||||| || ||| ||||| |||||||||||||| ||||||||    
T  35011771 gttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgtctcctctttataatctcttatcaagagtcttatctac 35011678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 548 - 641
Target Start/End: Complemental strand, 35011978 - 35011885
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatctac 641  Q
    ||||||||||  || |||||| |||||||||||||| |||||||||||||| ||||  || ||| |||||||||||||||||||| ||||||||    
T  35011978 gttgaaatttggggcctaactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatcaagagtcttatctac 35011885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 29763686 - 29763778
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||| ||||||| | |||||||||||||| ||||||||| || | ||||| || ||| |||||||||||||||||||| |||||||    
T  29763686 gttgaaatttagggtctaattcatccttacaaaaccggttcataagatggggagtgtctcctctttataaactcttatcaagagtcttatcta 29763778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 50203847 - 50203939
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| ||| |||||||||| ||||  || ||| ||||||||||| |||||||| |||||||    
T  50203847 gttgaaatttggggcctaactcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaactcttctcaagagtcttatcta 50203939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 640
Target Start/End: Complemental strand, 26927018 - 26926929
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||  ||| |||||| ||||||| |||||| |||||||||||||| | ||| || ||| |||||||||||||||||||| |||||||    
T  26927018 tgaaattggaggcctaactcatcctta-aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatcta 26926929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 640
Target Start/End: Complemental strand, 31801850 - 31801752
Alignment:
Q  542 tatatcgttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||| |||||||||||  |||||| | |||||||||||| ||||||||||| |||| | |||  | ||| |||||||| ||||||||||| |||||||    
T  31801850 tatatggttgaaatttagagtctaattcatccttacaaaatcagttcataagatgaggaatgtcccttctttataaactattatcaagagtcttatcta 31801752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 640
Target Start/End: Complemental strand, 32034202 - 32034113
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||  |||||||||| ||||||| |||||| |||||||||||||| | ||| || | | |||||||||||||||||||| |||||||    
T  32034202 tgaaattggaggtctaactcatcctta-aaaaccggttcataaggtgaggattgtctcctttgtataaactcttatcaagagtcttatcta 32034113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 640
Target Start/End: Complemental strand, 40926892 - 40926803
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||| |||| |||||| ||||||| |||||| |||||||||| ||| | ||| || ||| |||||||||||||||||||| |||||||    
T  40926892 tgaaattgaaggactaactcatcctta-aaaaccggttcataaggagaggattgtctcctctatataaactcttatcaagagtcttatcta 40926803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 548 - 637
Target Start/End: Original strand, 19820518 - 19820607
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattat 637  Q
    |||||||||| ||| |||||| |||||||||||||| |||  ||||||||| | ||| || ||| ||||||||||| |||||||| ||||    
T  19820518 gttgaaatttgaggcctaactcatccttacaaaaccggtttgtaaggtgaggattgtctcctctttataaactcttctcaagagttttat 19820607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 4029634 - 4029726
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| |||  ||||||||  | |||||| ||| ||||||||||| |||||||| |||||||    
T  4029634 gttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaagattgtatcctctttataaactcttctcaagagtcttatcta 4029726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 578 - 640
Target Start/End: Complemental strand, 39269584 - 39269522
Alignment:
Q  578 aaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||||||||| |||| | ||| || ||| |||||||||||||||||||| |||||||    
T  39269584 aaaaccagttcataagttgaggattgtctcctctatataaactcttatcaagagtcttatcta 39269522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 637
Target Start/End: Complemental strand, 11414477 - 11414388
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattat 637  Q
    |||||||||| ||| |||||| |||||||||||||| | |  ||||||||| | ||| || ||| ||||||||||| |||||||| ||||    
T  11414477 gttgaaatttgaggcctaactcatccttacaaaaccggcttctaaggtgaggattgtctcctctttataaactcttctcaagagtcttat 11414388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 550 - 639
Target Start/End: Original strand, 37039976 - 37040064
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatct 639  Q
    |||||||  ||| |||||| ||||||| ||||| | ||||||||||||||| ||| || ||| ||| |||||||||||||||| ||||||    
T  37039976 tgaaattggaggcctaactcatcctta-aaaactaattcataaggtgagaattgtctcctctatattaactcttatcaagagtcttatct 37040064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 559 - 640
Target Start/End: Complemental strand, 40927132 - 40927052
Alignment:
Q  559 aggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||| |||| ||||||| ||||| |||||||||| |||| | ||| || ||| |||||||||||||||||||| |||||||    
T  40927132 aggtccaactcatcctta-aaaactagttcataagatgaggattgtctcctctatataaactcttatcaagagtcttatcta 40927052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 604
Target Start/End: Complemental strand, 1715643 - 1715599
Alignment:
Q  560 ggtctaacttatccttacaaaaccagttcataaggtgagaagtgt 604  Q
    ||||||||| |||||||||||| |||||||||||||||| |||||    
T  1715643 ggtctaactcatccttacaaaatcagttcataaggtgaggagtgt 1715599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 44461402 - 44461310
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||| ||  ||||| || |||| |||||  |||||||||||||| ||||| || ||| |||||| ||||||||| ||| |||||||    
T  44461402 gttgaaatttagggcttaactaattcttataaaactggttcataaggtgaggagtgtctcctctttataaattcttatcaatagttttatcta 44461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 50338372 - 50338464
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  ||||||||| | |||||||||||| | |  ||||||||  | ||| || ||| |||||||||||||||||||| |||||||    
T  50338372 gttgaaatttggggtctaactcaaccttacaaaaccggcttgtaaggtgaagattgtctcctctatataaactcttatcaagagtcttatcta 50338464  T

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Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 550 - 637
Target Start/End: Complemental strand, 39269156 - 39269070
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattat 637  Q
    |||||||  |||||||||| ||||||| |||||  |||||||||||||| | ||  || ||| |||||||||||||||||||| ||||    
T  39269156 tgaaattggaggtctaactcatcctta-aaaactggttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttat 39269070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 548 - 643
Target Start/End: Original strand, 44461057 - 44461152
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatctaccc 643  Q
    ||||||||||   ||| |||| |||||||||||||   |||| |||||||| | ||| || ||| |||||||||||||||||||| |||| |||||    
T  44461057 gttgaaatttggagtccaactcatccttacaaaactgattcacaaggtgaggaatgtctcctctttataaactcttatcaagagtgttatttaccc 44461152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 563 - 637
Target Start/End: Original strand, 16060890 - 16060964
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattat 637  Q
    |||||| |||||||||||||||| |  || |||||  ||||| |||||| ||||||||||| |||||| ||||||    
T  16060890 ctaactcatccttacaaaaccagcttgtacggtgaagagtgtctcatctttataaactcttctcaagaatattat 16060964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 550 - 640
Target Start/End: Original strand, 19984644 - 19984733
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||  |||||||||| ||||||| |||||| |||||||||||||| | ||| |  ||| |||||||||||| ||| ||| |||||||    
T  19984644 tgaaattggaggtctaactcatcctta-aaaaccggttcataaggtgaggattgtctagtctatataaactcttaccaaaagtcttatcta 19984733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 386 - 432
Target Start/End: Original strand, 29763685 - 29763731
Alignment:
Q  386 tgttgaaatttaaggtctaatttatccttacaaaaacagttcataag 432  Q
    |||||||||||| ||||||||| |||||||||||| | |||||||||    
T  29763685 tgttgaaatttagggtctaattcatccttacaaaaccggttcataag 29763731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 550 - 640
Target Start/End: Complemental strand, 40926565 - 40926476
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||  ||| |||||| ||||||| |||||| |||| ||||| ||| | ||| || ||| |||||||||||||||||||| |||||||    
T  40926565 tgaaattggaggcctaactcatcctta-aaaaccggttcttaaggagaggattgtctcctctatataaactcttatcaagagtcttatcta 40926476  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 550 - 640
Target Start/End: Complemental strand, 44367690 - 44367601
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||| ||| |||||| ||||||  |||| ||||||||||| |||| | ||| || ||| ||||||||||| |||||||| |||||||    
T  44367690 tgaaatttgaggcctaactcatccttg-aaaatcagttcataagttgaggattgtctcctctatataaactcttctcaagagtcttatcta 44367601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 632
Target Start/End: Original strand, 13769296 - 13769365
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    |||||| |||||||||||||||| |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  13769296 ctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 13769365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 432
Target Start/End: Complemental strand, 31801844 - 31801799
Alignment:
Q  387 gttgaaatttaaggtctaatttatccttacaaaaacagttcataag 432  Q
    |||||||||||  |||||||| |||||||||||| |||||||||||    
T  31801844 gttgaaatttagagtctaattcatccttacaaaatcagttcataag 31801799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 559 - 628
Target Start/End: Complemental strand, 33799222 - 33799153
Alignment:
Q  559 aggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaa 628  Q
    |||||||||| |||||||||||| | |||||| |||| || | ||| || ||| ||||||||||||||||    
T  33799222 aggtctaactcatccttacaaaatcggttcatcaggttaggattgtctcctctatataaactcttatcaa 33799153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 633
Target Start/End: Complemental strand, 44574050 - 44573965
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagta 633  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| |||||||||    
T  44574050 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagta 44573965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 640
Target Start/End: Original strand, 53761403 - 53761480
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| | |||||||||||| | |||| ||||||| ||||  || ||| ||||||||||||||||| || |||||||    
T  53761403 ctaactcaaccttacaaaaccggctcattaggtgaggagtgcctcctctttataaactcttatcaagggtcttatcta 53761480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 560 - 640
Target Start/End: Original strand, 44145123 - 44145203
Alignment:
Q  560 ggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||| | ||||||| |||||||  | |||||||||| | ||| || ||| |||||||| ||||||||||| |||||||    
T  44145123 ggtctaaatcatccttataaaaccaacttataaggtgagtattgtctcctctttataaactattatcaagagtcttatcta 44145203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 44573440 - 44573348
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||| || || |||||| |||||||||||||| | |  || |||||| ||||  || ||| ||||||||||| ||||||||| ||||||    
T  44573440 gttgaaatctagggcctaactcatccttacaaaaccggcttgtagggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 44573348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 44573753 - 44573661
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| |||||| | |||||||    
T  44573753 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagatttttatcta 44573661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Complemental strand, 50692640 - 50692556
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| | ||  || ||| ||||||||||||||||||||    
T  50692640 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagt 50692556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 550 - 640
Target Start/End: Complemental strand, 39386782 - 39386692
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||  ||| |||||| ||||||||||||||||||||||||||||| | ||  || ||| |||||||||||||||||||| |||||||    
T  39386782 tgaaattggaggcctaactcatccttacaaaaccagttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttatcta 39386692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 6183356 - 6183448
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  ||||||||| |||||||||||||| | |  ||||||||||||||| || ||| ||||||||||| ||||||||| ||||||    
T  6183356 gttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggtgagaagtgtctcctctttataaactcttctcaagagtactatcta 6183448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 640
Target Start/End: Complemental strand, 29676406 - 29676316
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||  |||||||||||| |||||||||||| |||| ||||||||| | ||  || | | |||||||||||||||||||| |||||||    
T  29676406 tgaaattggaggtctaacttaaccttacaaaaccggttcttaaggtgaggattgactcctatatataaactcttatcaagagtcttatcta 29676316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 563 - 640
Target Start/End: Original strand, 8044550 - 8044628
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatc-tctataaactcttatcaagagtattatcta 640  Q
    |||||| |||||||||||||  |||||||||||||| ||||  || || | |||||||||||||||||||| |||||||    
T  8044550 ctaactcatccttacaaaactggttcataaggtgaggagtgcctcctcttttataaactcttatcaagagtcttatcta 8044628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 563 - 632
Target Start/End: Original strand, 10542068 - 10542137
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    |||||| |||||||||||||||| |  |||| |||| ||||| || ||| ||||||||||||||||||||    
T  10542068 ctaactcatccttacaaaaccagcttgtaagatgaggagtgtctcctctttataaactcttatcaagagt 10542137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 597
Target Start/End: Complemental strand, 22447214 - 22447165
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtga 597  Q
    ||||||||||  ||||||||| |||||||||||||| |||||||||||||    
T  22447214 gttgaaatttggggtctaactcatccttacaaaaccggttcataaggtga 22447165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 629
Target Start/End: Complemental strand, 10429852 - 10429772
Alignment:
Q  549 ttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaag 629  Q
    |||||||||  ||||||||| |||||||||||||| | |  |||| |||| ||||| || ||| |||||||||||||||||    
T  10429852 ttgaaatttggggtctaactcatccttacaaaaccggcttgtaagatgaggagtgtctcctctttataaactcttatcaag 10429772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 640
Target Start/End: Original strand, 27545118 - 27545198
Alignment:
Q  560 ggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||| |||||||||||||| |||  ||||||||| | ||  || ||| ||||||||||| |||||||| |||||||    
T  27545118 ggtctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 27545198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 43195898 - 43195806
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||| ||||||    
T  43195898 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 43195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 563 - 637
Target Start/End: Original strand, 10536934 - 10537008
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattat 637  Q
    |||||| |||||| ||||||| |||||||||||||||||||  || |   |||||||||| ||||||||| ||||    
T  10536934 ctaactcatccttgcaaaaccggttcataaggtgagaagtgcctccttcttataaactctcatcaagagtcttat 10537008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 550 - 640
Target Start/End: Complemental strand, 11969164 - 11969074
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||| ||||||    
T  11969164 tgaaattttgggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 11969074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 640
Target Start/End: Original strand, 3435491 - 3435568
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| |||||||||||||| |||  ||||||||| | ||  || ||| ||||||||||| |||||||| |||||||    
T  3435491 ctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcctctgtataaactcttctcaagagtcttatcta 3435568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 640
Target Start/End: Original strand, 3976476 - 3976553
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| |||||| |||||||||    
T  3976476 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaatattatcta 3976553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 564 - 625
Target Start/End: Complemental strand, 41002331 - 41002270
Alignment:
Q  564 taacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttat 625  Q
    ||||| ||||||| |||| | ||| |||||||||||| ||| |||||| |||||||||||||    
T  41002331 taactcatccttataaaatcggtttataaggtgagaaatgtctcatctttataaactcttat 41002270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 563 - 631
Target Start/End: Original strand, 10849496 - 10849564
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagag 631  Q
    |||||| |||||||||||||||  |  ||||||||| ||||  || ||| |||||||||||||||||||    
T  10849496 ctaactcatccttacaaaaccaacttgtaaggtgaggagtgcctcctctttataaactcttatcaagag 10849564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 12432012 - 12431920
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || ||| || |||||||||||||| | |  ||||||||| | ||| || ||| ||||||||||| |||||||| |||||||    
T  12432012 gttgaaatttggggcctagctcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatcta 12431920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 560 - 640
Target Start/End: Complemental strand, 17265299 - 17265219
Alignment:
Q  560 ggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||| ||| ||||||| |||| | |||||| ||||||| | || ||| ||| |||||||||||| ||||||| |||||||    
T  17265299 ggtctgactcatccttaaaaaatcggttcatcaggtgaggattgcatcctctatataaactcttaccaagagtcttatcta 17265219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 21214191 - 21214275
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  21214191 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 21214275  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 32667297 - 32667205
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  |||||| || | ||  || ||| |||||||||||||||||||| |||||||    
T  32667297 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtaaggattgcctcctctatataaactcttatcaagagtcttatcta 32667205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 42768324 - 42768408
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  42768324 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 42768408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 16565008 - 16564916
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||||||| |||||| ||||||| |||||| |||||||||||||| ||||  || | | ||||||||||||| |||||| |||||||    
T  16565008 gttgaaatttaaggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttataaactcttattaagagtcttatcta 16564916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 16600654 - 16600746
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||||||| |||||| ||||||| |||||| |||||||||||||| ||||  || | | ||||||||||||| |||||| |||||||    
T  16600654 gttgaaatttaaggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctcctatttataaactcttattaagagtcttatcta 16600746  T

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Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 550 - 640
Target Start/End: Complemental strand, 5266471 - 5266381
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||  |||||||||| |||||||||||||| ||||||||| |||| | || ||| ||| ||||| |||||||||||||| |||||||    
T  5266471 tgaaattggaggtctaactcatccttacaaaaccggttcataagttgaggattggatcctctatataatctcttatcaagagtcttatcta 5266381  T

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Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 31357664 - 31357757
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccag-ttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||| ||| |||||| |||||||||||| | | ||||||||||||| | ||| || ||| |||||||||||||||||||| |||||||    
T  31357664 gttgaaatttgaggcctaactcatccttacaaaatcggcttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatcta 31357757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 33855805 - 33855713
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| || ||||||||||| |||||||||||||| ||||| || ||| |||||||| |||||| |||| |||||||    
T  33855805 gttgaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatcta 33855713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 640
Target Start/End: Complemental strand, 33834061 - 33833972
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||  ||| |||||| ||||||| |||||| |||||||||||||| | ||| || ||| |||||||||||||||||||| |||||||    
T  33834061 tgaaattggaggcctaactcatcctta-aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatcta 33833972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 4257990 - 4258082
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||| ||| |||||| ||||||| |||||  |||||||||||||| ||||  || | |  ||||||||||||||||||| |||||||    
T  4257990 gttgaaatttgaggcctaactcatccttaaaaaactggttcataaggtgaggagtgcctcctattgataaactcttatcaagagtcttatcta 4258082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 16565212 - 16565120
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||| ||| |||||| |||| || |||| | |||||||||||||| ||||  || | | |||||||||||||||||||| |||||||    
T  16565212 gttgaaatttgaggcctaactcatccgtaaaaaatcggttcataaggtgaggagtgcctcctatttataaactcttatcaagagtcttatcta 16565120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 16600450 - 16600542
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||| ||| |||||| |||| || |||| | |||||||||||||| ||||  || | | |||||||||||||||||||| |||||||    
T  16600450 gttgaaatttgaggcctaactcatccgtaaaaaatcggttcataaggtgaggagtgcctcctatttataaactcttatcaagagtcttatcta 16600542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 632
Target Start/End: Complemental strand, 34590626 - 34590558
Alignment:
Q  564 taacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||| |||||||||||||| |||||||||||||| ||||  || ||| ||||||||||||| ||||||    
T  34590626 taactcatccttacaaaaccggttcataaggtgaggagtgcctcctctttataaactcttatgaagagt 34590558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 578 - 640
Target Start/End: Complemental strand, 33834239 - 33834177
Alignment:
Q  578 aaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| |||||||||||||| | ||| || ||| |||||||||||||||||||| |||||||    
T  33834239 aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatcta 33834177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 560 - 630
Target Start/End: Original strand, 36092601 - 36092671
Alignment:
Q  560 ggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaaga 630  Q
    ||||||||| |||||||||||||||| |  ||||||||| ||||  || ||||||||||||||| ||||||    
T  36092601 ggtctaactcatccttacaaaaccagcttgtaaggtgaggagtgcctcctctctataaactcttctcaaga 36092671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 570 - 640
Target Start/End: Complemental strand, 41670675 - 41670605
Alignment:
Q  570 atccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||||||||||  ||||||||| ||||  || ||| ||||||||||| ||||||||| ||||||    
T  41670675 atccttacaaaaccagtttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatcta 41670605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 563 - 640
Target Start/End: Original strand, 7832968 - 7833045
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| ||||||| |||||| |||||||||||||| | ||  || ||| ||||||||| |||||||||| |||||||    
T  7832968 ctaactcatccttaaaaaaccggttcataaggtgaggattgcctcctctatataaactcctatcaagagtcttatcta 7833045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 550 - 639
Target Start/End: Original strand, 38948406 - 38948494
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatct 639  Q
    |||||||  |||||||||| ||||||| |||| || |||| |||||||||| ||| || ||| ||||||||||||| |||||| ||||||    
T  38948406 tgaaattggaggtctaactcatcctta-aaaatcaattcacaaggtgagaattgtctcctctatataaactcttataaagagtcttatct 38948494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 563 - 632
Target Start/End: Original strand, 40137701 - 40137770
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    |||||| |||||||||||||| | || ||||||||| ||||| || ||| ||||||||||||| ||||||    
T  40137701 ctaactcatccttacaaaaccggctcgtaaggtgaggagtgtctcttctttataaactcttattaagagt 40137770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 640
Target Start/End: Complemental strand, 29646162 - 29646086
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| ||||||| |||||| |||||||||||||| | ||  || ||| ||||||||| |||||||||| |||||||    
T  29646162 ctaactcatcctta-aaaaccggttcataaggtgaggattgcctcctctatataaactcctatcaagagtcttatcta 29646086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 632
Target Start/End: Original strand, 37272050 - 37272119
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||||||||||||    
T  37272050 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagt 37272119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 640
Target Start/End: Original strand, 47855996 - 47856073
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| || ||||||||| | | |||||||||| | ||||  || ||| |||||||||||||||||||| |||||||    
T  47855996 ctaactgatgcttacaaaatcggctcataaggtggggagtgcctcctctttataaactcttatcaagagtcttatcta 47856073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 1661181 - 1661273
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| || ||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| |||||||| |||||||    
T  1661181 gttgaaatttggggcctaactcattcttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttttatcta 1661273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 6783152 - 6783060
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| | ||  || ||| ||||||||||| |||||||| |||||||    
T  6783152 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 6783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 23396723 - 23396631
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| | ||  |||||| |||| |||||| |||||||| |||||||    
T  23396723 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcatctttatatactcttctcaagagtcttatcta 23396631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 640
Target Start/End: Original strand, 40121624 - 40121700
Alignment:
Q  564 taacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||| |||||||||||||| | |  || |||||| ||||  || ||||||||||||||| ||||||||| ||||||    
T  40121624 taactcatccttacaaaaccggcttgtagggtgaggagtgcctcctctctataaactcttctcaagagtactatcta 40121700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 43167899 - 43167967
Alignment:
Q  564 taacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||| |||||||||||||| | |||||||||||| | ||  || ||| ||||||||||| ||||||||    
T  43167899 taactcatccttacaaaaccggctcataaggtgaggattgcctcctctttataaactcttctcaagagt 43167967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 33435997 - 33435905
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||||||||||||| ||| |||||||||| | |  ||||||||| | ||| || | | |||||||||||||||||||| |||||||    
T  33435997 gttgaaatttaaggtctaactcatctttacaaaaccggcttgtaaggtgaggattgtctcctttatataaactcttatcaagagtcttatcta 33435905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 644
Target Start/End: Complemental strand, 36997280 - 36997184
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatctaccca 644  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||||||||||||| ||||||||||    
T  36997280 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtagtatctaccca 36997184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 550 - 637
Target Start/End: Original strand, 16051247 - 16051333
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattat 637  Q
    |||||||  ||| |||||| ||||||| ||||||| ||||||||||||| ||||| || ||| |||||||||||||||||||| ||||    
T  16051247 tgaaattggaggcctaactcatcctta-aaaaccaattcataaggtgaggagtgtctcctctatataaactcttatcaagagtcttat 16051333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 640
Target Start/End: Original strand, 43901010 - 43901099
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||  ||| |||||| ||||||| |||||| |||||||||||||| | ||| || ||| |||||||||||||||||||| |||||||    
T  43901010 tgaaattggaggcctaactcatcctta-aaaaccggttcataaggtgaggattgtctcctctatataaactcttatcaagagtcttatcta 43901099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 604
Target Start/End: Complemental strand, 30066096 - 30066040
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgt 604  Q
    ||||||||||  || |||||| ||||||||||||||||||||||||||||| |||||    
T  30066096 gttgaaatttggggcctaactcatccttacaaaaccagttcataaggtgaggagtgt 30066040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 578 - 640
Target Start/End: Complemental strand, 3895215 - 3895153
Alignment:
Q  578 aaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||||||||||||| | ||  || ||| |||||||||||||||||||| |||||||    
T  3895215 aaaaccagttcataaggtgaggattgcctcctctatataaactcttatcaagagtcttatcta 3895153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 548 - 629
Target Start/End: Complemental strand, 7622008 - 7621927
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaag 629  Q
    ||||||||||  || |||||| |||||||||||| ||  | |||||| ||| ||||| || |||||||||||||||||||||    
T  7622008 gttgaaatttggggcctaactcatccttacaaaatcaacttataaggagaggagtgtctcctctctataaactcttatcaag 7621927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 20760650 - 20760734
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||| |||  ||||||||| | ||  |||||| ||||||||||| ||||||||    
T  20760650 gttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggtgaggattgcctcatctttataaactcttctcaagagt 20760734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 36039784 - 36039868
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  ||||||||| |||||||||||||| | |  | ||||||| |||| ||| ||| |||||||||| |||||||||    
T  36039784 gttgaaatttggggtctaactcatccttacaaaaccggcttgtgaggtgagtagtgcatcctctttataaactctcatcaagagt 36039868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 563 - 638
Target Start/End: Original strand, 15968070 - 15968144
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatc 638  Q
    |||||| ||||||| |||||| |||||||||||||| | ||| || | | |||||||||||||||||||| |||||    
T  15968070 ctaactcatcctta-aaaaccggttcataaggtgaggattgtctcctttatataaactcttatcaagagtcttatc 15968144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 632
Target Start/End: Complemental strand, 36037303 - 36037220
Alignment:
Q  549 ttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    |||||||||  ||||||||| |||||||||||||| | |  | ||||||| |||| ||| ||| |||||||||| |||||||||    
T  36037303 ttgaaatttggggtctaactcatccttacaaaaccggcttgtgaggtgaggagtgcatcctctttataaactctcatcaagagt 36037220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 640
Target Start/End: Complemental strand, 21653426 - 21653349
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| |||||||||||||| | |  ||||||||||||||  || ||| ||||||||||| ||||||| | ||||||    
T  21653426 ctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctatataaactcttctcaagagcactatcta 21653349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 632
Target Start/End: Complemental strand, 34248176 - 34248107
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||||||||||||    
T  34248176 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagt 34248107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 632
Target Start/End: Complemental strand, 34248458 - 34248389
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||||||||||||    
T  34248458 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagt 34248389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Complemental strand, 18905970 - 18905886
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  18905970 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 18905886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 20298506 - 20298598
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| ||| |||||||||||| |  ||||||||| ||||  || ||| ||||||||||| |||||| || ||||||    
T  20298506 gttgaaatttggggcctaactcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaataatatcta 20298598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 21085138 - 21085222
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| ||| |||||||||||| |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  21085138 gttgaaatttggggcctaactcatcattacaaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagt 21085222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 40902383 - 40902467
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || ||||||||||||||||||||| | |  ||||||||| | ||  || ||| ||||||||||| ||||||||    
T  40902383 gttgaaatttggggcctaacttatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagt 40902467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 43599425 - 43599333
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| | ||  || ||| ||||||||||| |||||||| |||||||    
T  43599425 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 43599333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 26098456 - 26098364
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||| | |||||||||||||| ||||| || ||| |||||||| |||||| |||| |||||||    
T  26098456 gttgaaatttggggcctaactcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatcta 26098364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 548 - 638
Target Start/End: Complemental strand, 25999137 - 25999047
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatc 638  Q
    ||||||||||  || |||||| || ||||||||||| |||||||||||||| ||||| || ||| |||||||| |||||| |||| |||||    
T  25999137 gttgaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatc 25999047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 548 - 638
Target Start/End: Complemental strand, 26098868 - 26098778
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatc 638  Q
    ||||||||||  || |||||| || ||||||||||| |||||||||||||| ||||| || ||| |||||||| |||||| |||| |||||    
T  26098868 gttgaaatttggggcctaactcattcttacaaaaccggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatc 26098778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 19054607 - 19054515
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  |||||| ||||||||||| |||||||| |||||||    
T  19054607 gttgaaatttggggactaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcatctttataaactcttctcaagagtgttatcta 19054515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 25998931 - 25998839
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||| | |||||||||||| | |||||||||||||| ||||| || ||| |||||||| |||||| |||| |||||||    
T  25998931 gttgaaatttggggcctaaatcatccttacaaaagcggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatcta 25998839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 548 - 638
Target Start/End: Complemental strand, 26098662 - 26098572
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatc 638  Q
    ||||||||||  || |||||| || ||||||||| | |||||||||||||| ||||| || ||| |||||||| |||||| |||| |||||    
T  26098662 gttgaaatttggggcctaactcattcttacaaaagcggttcataaggtgaggagtgtctcctctttataaactattatcatgagtcttatc 26098572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 550 - 639
Target Start/End: Original strand, 10733430 - 10733519
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatct 639  Q
    ||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||| || ||| ||||||||||| |||||||| ||||||    
T  10733430 tgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgtctcctctttataaactcttctcaagagtgttatct 10733519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 563 - 640
Target Start/End: Original strand, 19291923 - 19292000
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| |||||||||||||||  | |||||||||| | ||| || ||| || ||||||||||||||||| |||||||    
T  19291923 ctaactcatccttacaaaaccaacttataaggtgaggattgtctcctctatacaaactcttatcaagagtcttatcta 19292000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 1744832 - 1744924
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||| ||||||    
T  1744832 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttttcaagagtactatcta 1744924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 12134473 - 12134557
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||| |||  |||||| || ||||| || ||| ||||||||||| ||||||||    
T  12134473 gttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggttaggagtgtctcctctttataaactcttctcaagagt 12134557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 24558902 - 24558810
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||||| |  ||||||||| | ||| || ||| ||||||||||| | |||||| |||||||    
T  24558902 gttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggtgaggattgtctcctctttataaactcttctaaagagtcttatcta 24558810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 28149907 - 28149815
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| | ||  || ||| |||||||||||||||||||| |||||||    
T  28149907 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagttttatcta 28149815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 570 - 640
Target Start/End: Complemental strand, 30539327 - 30539257
Alignment:
Q  570 atccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||||||| | |  ||||||||| ||||| ||  || |||||||||||||||||||| |||||||    
T  30539327 atccttacaaaaccggcttgtaaggtgaggagtgtctcgcctttataaactcttatcaagagtcttatcta 30539257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 5269263 - 5269355
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||| |||||| ||||||||| |||||||||||||| | |  ||||||||| | ||  |  ||| ||||||||||| |||||||| |||||||    
T  5269263 gttgtaatttagggtctaactcatccttacaaaaccggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatcta 5269355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 24055099 - 24055183
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| ||||  || ||| ||||||||||| ||||||||    
T  24055099 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcctcgtctttataaactcttctcaagagt 24055183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 30539534 - 30539442
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||  |||||||||||||| | | ||||| |||| ||||  ||| || |||||||||||||||| ||| |||||||    
T  30539534 gttgaaatttggggcctaacccatccttacaaaaccgggttataagatgaggagtgcctcacctttataaactcttatcaaaagtcttatcta 30539442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 547 - 639
Target Start/End: Original strand, 31728988 - 31729080
Alignment:
Q  547 cgttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatct 639  Q
    ||||||||||| |||| ||||  |||||||||||||||  | |||||||||||  || ||| | | |||||||| ||||| ||||| ||||||    
T  31728988 cgttgaaattttaggtttaacccatccttacaaaaccaacttataaggtgagagatgcatcctttttataaactattatccagagttttatct 31729080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 13844127 - 13844035
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||| || |||||| ||||||||||||||  ||  ||||||||||||||  || ||| ||||||||||| ||||||||| ||||||    
T  13844127 gttgaaatttagggcctaactcatccttacaaaaccgttttgtaaggtgagaagtgcctcctctttataaactcttctcaagagtactatcta 13844035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 549 - 640
Target Start/End: Complemental strand, 39268339 - 39268248
Alignment:
Q  549 ttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||| ||| |||||| ||||||| |||||| |||||||||||||| ||||  ||   | |||||||||||||||||||| |||||||    
T  39268339 ttgaaattttaggcctaactcatccttaaaaaaccggttcataaggtgaggagtgcctccaatttataaactcttatcaagagttttatcta 39268248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 563 - 640
Target Start/End: Complemental strand, 2716442 - 2716365
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| |||||||||||||||| | |||||||||| ||||| || ||| |||||||| ||||||| |||| ||||||    
T  2716442 ctaactcatccttacaaaaccagcttataaggtgaggagtgtctcctctttataaacttttatcaacagtaatatcta 2716365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 573 - 640
Target Start/End: Complemental strand, 10668449 - 10668382
Alignment:
Q  573 cttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||||| | |||||||||| ||||| || ||| | |||||||||||||||||| |||||||    
T  10668449 cttacaaaaccagcttataaggtgaggagtgtctcctctttgtaaactcttatcaagagttttatcta 10668382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 39268136 - 39268040
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttac----aaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||||| ||| |||||| |||||||     ||||||||||||||||||||| ||||  || | | |||||||||||||||||||| |||||||    
T  39268136 gttgaaatttgaggcctaactcatccttaattaaaaaaccagttcataaggtgaggagtgcctcctatttataaactcttatcaagagtcttatcta 39268040  T

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Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 560 - 638
Target Start/End: Complemental strand, 18107935 - 18107857
Alignment:
Q  560 ggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatc 638  Q
    ||||||| | |||||||||||||| ||| |||||||||| ||||  || ||| |||||| ||||||||||||| |||||    
T  18107935 ggtctaattcatccttacaaaaccggtttataaggtgaggagtgcctcctctttataaattcttatcaagagtcttatc 18107857  T

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Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 563 - 632
Target Start/End: Complemental strand, 29432511 - 29432442
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    |||||| |||||||||||||| | |  ||||||||||||||  || ||| ||||||||||||||||||||    
T  29432511 ctaactcatccttacaaaaccggcttgtaaggtgagaagtgcctcctctttataaactcttatcaagagt 29432442  T

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Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 548 - 632
Target Start/End: Complemental strand, 34457417 - 34457333
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||||| || ||| ||| ||||||||||| ||||||||    
T  34457417 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagaattgcatcctctttataaactcttctcaagagt 34457333  T

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Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 560 - 603
Target Start/End: Complemental strand, 36882450 - 36882407
Alignment:
Q  560 ggtctaacttatccttacaaaaccagttcataaggtgagaagtg 603  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||    
T  36882450 ggtctaactcatccttacaaaaccggttcataaggtgaggagtg 36882407  T

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Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 550 - 640
Target Start/End: Original strand, 18873187 - 18873276
Alignment:
Q  550 tgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||||  |||||||||| ||||||| |||||  |||||||||||||| | ||  || ||| |||||||||||||||| ||| |||||||    
T  18873187 tgaaattggaggtctaactcatcctta-aaaactggttcataaggtgaggattgcctcctctatataaactcttatcaatagtcttatcta 18873276  T

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Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 632
Target Start/End: Complemental strand, 2716645 - 2716576
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    |||||| |||||||||||||| | | |||||||||| ||||  || ||  ||||||||||||||||||||    
T  2716645 ctaactcatccttacaaaaccggcttataaggtgaggagtgcctcctccttataaactcttatcaagagt 2716576  T

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Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 563 - 640
Target Start/End: Complemental strand, 38376830 - 38376753
Alignment:
Q  563 ctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||||| |||||||||||||| | |  ||||||||| | ||| || ||| ||||||||||| |||||||| |||||||    
T  38376830 ctaactcatccttacaaaaccggcttgtaaggtgaggattgtctcctctttataaactcttctcaagagtcttatcta 38376753  T

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Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 873686 - 873770
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| | ||  || ||||||||||||||| ||||||||    
T  873686 gttgaaatttggggcctaactcatccttacaaaacctgcttgtaaggtgaggaatgcctcctctctataaactcttctcaagagt 873770  T

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Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 632
Target Start/End: Original strand, 4465191 - 4465259
Alignment:
Q  564 taacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||| |||||||||||||||| |  ||||||||| ||||| || |||   ||||||||||||||||||    
T  4465191 taactcatccttacaaaaccagcttttaaggtgaggagtgtctcctcttagtaaactcttatcaagagt 4465259  T

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Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Complemental strand, 11632545 - 11632461
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || | |||| |||||||||||||| | | |||||||||| | ||  |||||| ||||||||||| ||||||||    
T  11632545 gttgaaatttggggcccaactcatccttacaaaaccggcttataaggtgaggattgcctcatctttataaactcttctcaagagt 11632461  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 13413698 - 13413606
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| | ||  || ||| ||||||||||| |||||||| |||||||    
T  13413698 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatcta 13413606  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Complemental strand, 13843811 - 13843719
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| || |  || ||| ||||||||||| ||||||||| ||||||    
T  13843811 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggagcgcctcctctttataaactcttctcaagagtactatcta 13843719  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Complemental strand, 34457210 - 34457126
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| | || ||| ||| ||||||||||| ||||||||    
T  34457210 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcatcctctttataaactcttctcaagagt 34457126  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Complemental strand, 38131878 - 38131794
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||| | ||| || ||| ||||||||||| ||||||||    
T  38131878 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgtctcctctttataaactcttctcaagagt 38131794  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 640
Target Start/End: Original strand, 40169031 - 40169123
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    ||||||||||  || |||||| |||||||||||||| | |  ||||||||||| ||  || ||| |||| |||||| |||||||| |||||||    
T  40169031 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggtgagaattgcctcctctttatatactcttctcaagagtcttatcta 40169123  T

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Target: scaffold1138 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 640
Target Start/End: Original strand, 1858 - 1955
Alignment:
Q  543 atatcgttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagtattatcta 640  Q
    |||| |||||||||| |||||||||| || ||||||||||| | |  ||||||||  ||||  || ||  |||||||||||||||||||| |||||||    
T  1858 atattgttgaaatttgaggtctaactcatgcttacaaaaccggcttgtaaggtgaagagtgcctcctcggtataaactcttatcaagagtcttatcta 1955  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 632
Target Start/End: Original strand, 21253 - 21337
Alignment:
Q  548 gttgaaatttaaggtctaacttatccttacaaaaccagttcataaggtgagaagtgtatcatctctataaactcttatcaagagt 632  Q
    |||||||||| ||| |||||| |||||||||||||||  |  ||||||||| | ||  || ||| ||||||||||| ||||||||    
T  21253 gttgaaatttgaggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcctcctctttataaactcttctcaagagt 21337  T

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