View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18752_high_17 (Length: 236)
Name: NF18752_high_17
Description: NF18752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18752_high_17 |
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Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 16097473 - 16097692
Alignment:
| Q |
1 |
acaataaccattccttggctctccctattaatgtaaaagcaaaccgcctaagtttcttttggtcctcagtgacattggctggtggcacatagtattggca |
100 |
Q |
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| T |
16097473 |
acaataaccattccttggctctccctattaatgtaaaagcaaaccgcctaagtttcttttggtcctcagtgacattggctggtggcacatagtattggca |
16097572 |
T |
|
| Q |
101 |
agtttcatagaacctacttaggtgctcatgagggcatgcattgggcatctcttcctccatattagttttatttcaaccctcattagacatatgctttgat |
200 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16097573 |
agtttcataaaacctacttaggtgctcatgagggcatgcattgggcatctcttcctccatattagttttatttcaaccctcattagacatatgctttgat |
16097672 |
T |
|
| Q |
201 |
gtcaaaaactacggggttgg |
220 |
Q |
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|||||||||||| ||||||| |
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| T |
16097673 |
gtcaaaaactacagggttgg |
16097692 |
T |
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