View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18752_low_17 (Length: 250)

Name: NF18752_low_17
Description: NF18752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18752_low_17
NF18752_low_17
[»] chr2 (50 HSPs)
chr2 (8-124)||(38234508-38234624)
chr2 (121-197)||(44946052-44946128)
chr2 (121-196)||(44929846-44929921)
chr2 (129-197)||(15038089-15038157)
chr2 (121-196)||(6714295-6714370)
chr2 (121-196)||(11941210-11941285)
chr2 (128-197)||(19054155-19054224)
chr2 (121-197)||(35171922-35171998)
chr2 (130-197)||(18976454-18976521)
chr2 (125-196)||(25293285-25293356)
chr2 (121-187)||(4769288-4769354)
chr2 (131-197)||(41314123-41314189)
chr2 (128-197)||(2140485-2140554)
chr2 (129-197)||(18692090-18692158)
chr2 (121-197)||(28668995-28669071)
chr2 (121-197)||(33827572-33827648)
chr2 (130-196)||(38784181-38784247)
chr2 (129-197)||(34516413-34516481)
chr2 (129-197)||(43374329-43374397)
chr2 (129-196)||(714125-714192)
chr2 (122-197)||(14486948-14487023)
chr2 (129-196)||(17324895-17324961)
chr2 (130-197)||(24196133-24196200)
chr2 (129-196)||(30466830-30466897)
chr2 (129-196)||(31778161-31778228)
chr2 (143-197)||(1845048-1845102)
chr2 (134-196)||(6006890-6006952)
chr2 (146-196)||(13266636-13266686)
chr2 (120-181)||(18708598-18708659)
chr2 (131-196)||(27269344-27269409)
chr2 (121-189)||(36242319-36242387)
chr2 (126-197)||(8192351-8192422)
chr2 (129-196)||(19849963-19850029)
chr2 (122-197)||(28194137-28194212)
chr2 (129-196)||(41329972-41330039)
chr2 (130-196)||(4852660-4852726)
chr2 (129-187)||(32845206-32845264)
chr2 (136-197)||(13747499-13747560)
chr2 (134-195)||(31439396-31439457)
chr2 (132-197)||(39957891-39957956)
chr2 (129-196)||(9400961-9401028)
chr2 (129-171)||(26176223-26176265)
chr2 (142-196)||(44026753-44026807)
chr2 (148-197)||(1501463-1501511)
chr2 (132-197)||(5394150-5394215)
chr2 (124-197)||(8259022-8259095)
chr2 (160-197)||(9946686-9946723)
chr2 (121-197)||(3943862-3943938)
chr2 (137-177)||(19893200-19893240)
chr2 (125-177)||(44976172-44976224)
[»] scaffold0102 (1 HSPs)
scaffold0102 (121-197)||(39214-39290)
[»] chr7 (53 HSPs)
chr7 (121-197)||(29861796-29861872)
chr7 (121-197)||(42913512-42913588)
chr7 (121-196)||(17196950-17197025)
chr7 (129-197)||(11997983-11998051)
chr7 (121-197)||(16374120-16374196)
chr7 (121-197)||(22120014-22120090)
chr7 (129-197)||(27312286-27312354)
chr7 (121-197)||(31197716-31197792)
chr7 (121-197)||(40542909-40542985)
chr7 (121-197)||(2751397-2751473)
chr7 (121-197)||(21835277-21835353)
chr7 (121-197)||(22703612-22703688)
chr7 (121-197)||(23092222-23092298)
chr7 (136-196)||(27009501-27009561)
chr7 (121-196)||(3851883-3851958)
chr7 (129-196)||(7275411-7275478)
chr7 (129-196)||(39145652-39145719)
chr7 (129-197)||(654704-654772)
chr7 (129-197)||(7175861-7175929)
chr7 (121-197)||(21217832-21217908)
chr7 (124-196)||(31712902-31712974)
chr7 (121-196)||(18044233-18044308)
chr7 (121-195)||(22638414-22638488)
chr7 (120-197)||(23330738-23330815)
chr7 (121-197)||(2344425-2344501)
chr7 (129-197)||(28089953-28090021)
chr7 (122-182)||(47541510-47541570)
chr7 (130-197)||(10091323-10091389)
chr7 (130-197)||(17279666-17279733)
chr7 (121-196)||(25333529-25333603)
chr7 (129-196)||(27704135-27704202)
chr7 (136-195)||(32849732-32849791)
chr7 (129-196)||(41907514-41907580)
chr7 (134-196)||(33137825-33137887)
chr7 (120-189)||(17212178-17212247)
chr7 (132-197)||(31274050-31274115)
chr7 (128-188)||(8943409-8943469)
chr7 (135-195)||(19421371-19421431)
chr7 (129-197)||(23012507-23012575)
chr7 (121-197)||(43785298-43785374)
chr7 (129-196)||(25102809-25102875)
chr7 (121-196)||(28950997-28951072)
chr7 (135-196)||(11909954-11910015)
chr7 (136-196)||(674436-674496)
chr7 (129-197)||(2103189-2103255)
chr7 (122-197)||(21574101-21574176)
chr7 (133-196)||(22643342-22643405)
chr7 (143-194)||(30345511-30345562)
chr7 (121-196)||(36772303-36772378)
chr7 (122-196)||(28647096-28647170)
chr7 (164-197)||(13332433-13332466)
chr7 (121-157)||(21373836-21373872)
chr7 (133-197)||(38372979-38373043)
[»] chr6 (28 HSPs)
chr6 (121-197)||(1345057-1345133)
chr6 (121-197)||(34147468-34147544)
chr6 (121-197)||(34160084-34160160)
chr6 (121-196)||(28672189-28672264)
chr6 (129-196)||(5360071-5360138)
chr6 (121-197)||(15360097-15360173)
chr6 (130-197)||(3222635-3222702)
chr6 (129-195)||(9239105-9239171)
chr6 (121-197)||(21982320-21982395)
chr6 (121-196)||(654146-654221)
chr6 (129-196)||(9208382-9208449)
chr6 (121-196)||(9690638-9690713)
chr6 (121-196)||(11448993-11449068)
chr6 (130-197)||(21148510-21148577)
chr6 (124-197)||(11007290-11007363)
chr6 (129-194)||(17149458-17149523)
chr6 (136-196)||(11841037-11841097)
chr6 (121-197)||(14213004-14213080)
chr6 (121-197)||(9844060-9844136)
chr6 (129-197)||(17081053-17081121)
chr6 (129-197)||(12390555-12390620)
chr6 (130-196)||(14504082-14504148)
chr6 (121-187)||(33718478-33718544)
chr6 (131-183)||(27866216-27866268)
chr6 (129-196)||(15730495-15730562)
chr6 (130-196)||(17225797-17225863)
chr6 (133-170)||(16531282-16531319)
chr6 (134-197)||(21903618-21903682)
[»] chr4 (61 HSPs)
chr4 (129-197)||(45787703-45787771)
chr4 (121-197)||(34844757-34844833)
chr4 (121-197)||(36131509-36131585)
chr4 (121-197)||(40058851-40058927)
chr4 (125-196)||(51535747-51535818)
chr4 (121-195)||(52983741-52983815)
chr4 (129-197)||(5609201-5609269)
chr4 (121-197)||(44343636-44343712)
chr4 (133-196)||(23639758-23639821)
chr4 (133-196)||(23645416-23645479)
chr4 (123-197)||(27528794-27528868)
chr4 (134-196)||(52494623-52494685)
chr4 (129-197)||(19660531-19660599)
chr4 (129-197)||(32986327-32986395)
chr4 (121-197)||(46714515-46714591)
chr4 (129-196)||(9978509-9978576)
chr4 (129-196)||(20566480-20566547)
chr4 (134-197)||(30879165-30879228)
chr4 (121-196)||(34723921-34723996)
chr4 (135-197)||(23131435-23131497)
chr4 (129-197)||(4912056-4912124)
chr4 (121-197)||(22488027-22488103)
chr4 (121-197)||(32990557-32990633)
chr4 (128-196)||(35229297-35229365)
chr4 (121-197)||(54127341-54127417)
chr4 (134-196)||(12824535-12824597)
chr4 (125-195)||(42508382-42508452)
chr4 (121-194)||(20077986-20078059)
chr4 (135-196)||(28929815-28929876)
chr4 (131-196)||(49287989-49288054)
chr4 (125-196)||(34835656-34835726)
chr4 (126-196)||(33289181-33289251)
chr4 (130-196)||(47464108-47464174)
chr4 (130-167)||(10143791-10143828)
chr4 (132-173)||(51961993-51962034)
chr4 (120-196)||(25852336-25852412)
chr4 (121-161)||(32942492-32942532)
chr4 (129-197)||(43719086-43719154)
chr4 (129-196)||(4064990-4065057)
chr4 (122-197)||(13017836-13017910)
chr4 (125-196)||(13486293-13486364)
chr4 (121-196)||(13771482-13771557)
chr4 (129-196)||(33696279-33696346)
chr4 (131-182)||(40252421-40252472)
chr4 (137-196)||(40307677-40307736)
chr4 (121-196)||(51595144-51595219)
chr4 (121-187)||(9517650-9517716)
chr4 (130-196)||(55158343-55158409)
chr4 (133-186)||(11109408-11109460)
chr4 (135-196)||(17637852-17637912)
chr4 (130-195)||(20527035-20527100)
chr4 (121-197)||(21387486-21387560)
chr4 (144-197)||(43352338-43352391)
chr4 (136-196)||(7093508-7093568)
chr4 (137-197)||(7391964-7392024)
chr4 (130-170)||(8158394-8158434)
chr4 (145-197)||(8442049-8442101)
chr4 (145-197)||(18875516-18875568)
chr4 (160-196)||(24672305-24672341)
chr4 (129-197)||(27574448-27574516)
chr4 (137-177)||(41085163-41085203)
[»] chr3 (67 HSPs)
chr3 (121-197)||(10190741-10190817)
chr3 (121-197)||(40133448-40133524)
chr3 (121-197)||(8097278-8097354)
chr3 (121-197)||(10083818-10083894)
chr3 (129-197)||(15566499-15566567)
chr3 (121-197)||(45529754-45529829)
chr3 (121-196)||(32151546-32151621)
chr3 (120-197)||(8958034-8958111)
chr3 (121-197)||(25289714-25289789)
chr3 (129-197)||(26174243-26174311)
chr3 (121-197)||(53233910-53233985)
chr3 (129-197)||(53848433-53848501)
chr3 (121-196)||(33398468-33398543)
chr3 (121-196)||(49258262-49258337)
chr3 (121-196)||(54475803-54475878)
chr3 (125-197)||(7195933-7196005)
chr3 (121-197)||(8456149-8456225)
chr3 (121-197)||(45272415-45272491)
chr3 (121-197)||(46576470-46576546)
chr3 (129-197)||(53424176-53424244)
chr3 (121-196)||(18176887-18176962)
chr3 (130-197)||(24165714-24165781)
chr3 (133-196)||(24407395-24407458)
chr3 (121-196)||(34492575-34492650)
chr3 (121-196)||(35493033-35493108)
chr3 (121-196)||(39041852-39041927)
chr3 (134-196)||(4048085-4048147)
chr3 (121-195)||(25379883-25379957)
chr3 (130-196)||(52821636-52821702)
chr3 (135-196)||(50731237-50731298)
chr3 (135-196)||(50781556-50781617)
chr3 (129-197)||(51532919-51532987)
chr3 (129-197)||(30257754-30257822)
chr3 (125-197)||(30807152-30807223)
chr3 (121-197)||(33698705-33698781)
chr3 (121-197)||(48977510-48977586)
chr3 (121-197)||(52455648-52455724)
chr3 (129-196)||(1692963-1693030)
chr3 (129-196)||(21363073-21363140)
chr3 (122-188)||(4252404-4252470)
chr3 (121-171)||(6127575-6127625)
chr3 (135-196)||(14997746-14997807)
chr3 (121-197)||(2511296-2511372)
chr3 (121-197)||(40940947-40941023)
chr3 (120-188)||(55371302-55371370)
chr3 (129-196)||(7485531-7485597)
chr3 (129-196)||(31537838-31537905)
chr3 (128-171)||(40302671-40302714)
chr3 (129-195)||(48105007-48105073)
chr3 (148-197)||(3747730-3747779)
chr3 (127-196)||(6041670-6041739)
chr3 (132-197)||(17579134-17579199)
chr3 (132-173)||(23890672-23890713)
chr3 (144-197)||(32094756-32094809)
chr3 (121-197)||(25344057-25344132)
chr3 (129-177)||(29915289-29915337)
chr3 (129-177)||(29964442-29964490)
chr3 (143-191)||(32414581-32414629)
chr3 (131-170)||(33793584-33793623)
chr3 (132-195)||(49030036-49030099)
chr3 (130-196)||(4462763-4462829)
chr3 (133-171)||(10538151-10538189)
chr3 (129-191)||(26158941-26159003)
chr3 (158-195)||(7469650-7469687)
chr3 (135-171)||(10682840-10682876)
chr3 (130-170)||(45660614-45660654)
chr3 (121-189)||(49167181-49167249)
[»] scaffold0366 (2 HSPs)
scaffold0366 (129-197)||(9299-9366)
scaffold0366 (130-197)||(12000-12067)
[»] scaffold0019 (1 HSPs)
scaffold0019 (129-197)||(161939-162007)
[»] chr8 (46 HSPs)
chr8 (121-197)||(2639410-2639486)
chr8 (121-197)||(4718771-4718847)
chr8 (121-197)||(20306034-20306110)
chr8 (121-197)||(21092667-21092743)
chr8 (121-197)||(42328130-42328206)
chr8 (121-196)||(21603356-21603431)
chr8 (132-197)||(20505689-20505754)
chr8 (121-197)||(8765525-8765601)
chr8 (125-197)||(19471740-19471812)
chr8 (125-197)||(19542664-19542736)
chr8 (125-197)||(19589960-19590032)
chr8 (121-197)||(34237654-34237730)
chr8 (129-195)||(7557952-7558018)
chr8 (129-197)||(2618320-2618388)
chr8 (121-197)||(3734622-3734698)
chr8 (121-197)||(28964159-28964234)
chr8 (121-197)||(32879405-32879481)
chr8 (121-197)||(34610686-34610762)
chr8 (121-197)||(39349382-39349458)
chr8 (121-196)||(18128639-18128714)
chr8 (121-196)||(42643118-42643193)
chr8 (130-196)||(2166831-2166897)
chr8 (121-195)||(15259407-15259481)
chr8 (121-195)||(28193600-28193674)
chr8 (136-196)||(3403502-3403562)
chr8 (129-197)||(4698722-4698790)
chr8 (129-197)||(33747016-33747084)
chr8 (121-196)||(10292180-10292255)
chr8 (129-196)||(12312979-12313046)
chr8 (133-196)||(25248485-25248547)
chr8 (135-197)||(14633094-14633156)
chr8 (129-191)||(43817754-43817816)
chr8 (137-197)||(34694574-34694634)
chr8 (129-196)||(264400-264467)
chr8 (129-196)||(651454-651521)
chr8 (129-196)||(837189-837256)
chr8 (129-196)||(6953008-6953074)
chr8 (139-174)||(7660917-7660952)
chr8 (132-195)||(8387460-8387523)
chr8 (129-196)||(20470051-20470117)
chr8 (132-187)||(28088423-28088478)
chr8 (135-189)||(36848757-36848811)
chr8 (121-197)||(24018508-24018585)
chr8 (128-173)||(30089422-30089467)
chr8 (121-197)||(1219475-1219551)
chr8 (125-189)||(13749186-13749250)
[»] chr5 (53 HSPs)
chr5 (121-197)||(8484660-8484736)
chr5 (121-197)||(27498730-27498806)
chr5 (121-196)||(22693057-22693132)
chr5 (121-197)||(15641105-15641180)
chr5 (129-197)||(18207337-18207405)
chr5 (121-197)||(21236361-21236437)
chr5 (121-197)||(22392810-22392886)
chr5 (125-196)||(11926501-11926572)
chr5 (130-197)||(19456210-19456277)
chr5 (121-196)||(34310264-34310339)
chr5 (131-197)||(37495186-37495252)
chr5 (132-197)||(41351103-41351168)
chr5 (121-197)||(4603899-4603975)
chr5 (121-197)||(7085625-7085701)
chr5 (121-196)||(10399895-10399971)
chr5 (129-197)||(30485958-30486026)
chr5 (121-197)||(31287945-31288021)
chr5 (121-197)||(32059439-32059515)
chr5 (121-197)||(33709502-33709578)
chr5 (121-197)||(35425135-35425211)
chr5 (129-197)||(38630978-38631046)
chr5 (125-196)||(9659311-9659382)
chr5 (121-188)||(13038463-13038530)
chr5 (121-188)||(13108458-13108525)
chr5 (125-188)||(36954944-36955007)
chr5 (130-191)||(11464913-11464974)
chr5 (137-189)||(38086361-38086413)
chr5 (129-197)||(38684337-38684405)
chr5 (129-196)||(5049266-5049333)
chr5 (121-196)||(13659245-13659320)
chr5 (129-196)||(19145412-19145479)
chr5 (121-196)||(34049933-34050008)
chr5 (134-196)||(27487554-27487616)
chr5 (132-197)||(10869564-10869629)
chr5 (124-197)||(12317154-12317226)
chr5 (139-196)||(28614486-28614543)
chr5 (130-182)||(5067392-5067444)
chr5 (145-197)||(10631288-10631340)
chr5 (129-197)||(12398447-12398515)
chr5 (133-196)||(6014280-6014343)
chr5 (129-196)||(23270522-23270589)
chr5 (135-197)||(8821120-8821182)
chr5 (130-196)||(21042574-21042640)
chr5 (135-196)||(25750613-25750674)
chr5 (130-187)||(42193614-42193671)
chr5 (132-196)||(36895558-36895622)
chr5 (130-177)||(3639901-3639948)
chr5 (130-197)||(41568868-41568935)
chr5 (150-196)||(7151454-7151500)
chr5 (131-189)||(8780594-8780652)
chr5 (143-197)||(25548533-25548587)
chr5 (143-196)||(10837440-10837493)
chr5 (131-195)||(22648154-22648218)
[»] scaffold0623 (1 HSPs)
scaffold0623 (129-196)||(1057-1123)
[»] scaffold0328 (1 HSPs)
scaffold0328 (121-196)||(13047-13122)
[»] chr1 (45 HSPs)
chr1 (129-192)||(1379027-1379090)
chr1 (121-195)||(34778461-34778535)
chr1 (121-197)||(4621236-4621312)
chr1 (121-197)||(15059401-15059477)
chr1 (132-196)||(23041655-23041719)
chr1 (121-196)||(24122145-24122220)
chr1 (121-196)||(24674515-24674590)
chr1 (129-196)||(36155888-36155955)
chr1 (121-197)||(7766726-7766802)
chr1 (121-197)||(8254751-8254827)
chr1 (129-197)||(27159215-27159283)
chr1 (121-197)||(33905509-33905585)
chr1 (121-196)||(18533724-18533799)
chr1 (121-195)||(17935891-17935965)
chr1 (134-196)||(52135261-52135323)
chr1 (128-197)||(27454863-27454932)
chr1 (128-196)||(1486549-1486617)
chr1 (129-197)||(22910001-22910069)
chr1 (125-197)||(23734243-23734315)
chr1 (125-197)||(23741435-23741507)
chr1 (129-197)||(30677306-30677374)
chr1 (121-188)||(8779744-8779811)
chr1 (128-195)||(36921513-36921579)
chr1 (125-196)||(45331621-45331692)
chr1 (121-161)||(12876971-12877011)
chr1 (129-197)||(48699889-48699957)
chr1 (129-196)||(7197247-7197314)
chr1 (129-196)||(26513148-26513215)
chr1 (121-191)||(32930871-32930941)
chr1 (129-195)||(37351454-37351520)
chr1 (121-170)||(2537815-2537864)
chr1 (128-197)||(46607939-46608008)
chr1 (121-197)||(7578531-7578607)
chr1 (144-196)||(16539752-16539804)
chr1 (150-197)||(14603947-14603994)
chr1 (129-196)||(35138118-35138185)
chr1 (121-196)||(50202668-50202742)
chr1 (146-196)||(5315478-5315528)
chr1 (129-194)||(8077777-8077841)
chr1 (128-181)||(14928508-14928561)
chr1 (122-171)||(16899626-16899675)
chr1 (122-171)||(29057363-29057412)
chr1 (121-197)||(168323-168399)
chr1 (135-195)||(2054633-2054693)
chr1 (132-188)||(25236997-25237053)
[»] scaffold0576 (1 HSPs)
scaffold0576 (121-197)||(5081-5157)
[»] scaffold0217 (1 HSPs)
scaffold0217 (121-196)||(7309-7384)
[»] scaffold0070 (1 HSPs)
scaffold0070 (121-197)||(40447-40522)
[»] scaffold0459 (1 HSPs)
scaffold0459 (130-197)||(10694-10760)
[»] scaffold0049 (1 HSPs)
scaffold0049 (121-196)||(66876-66951)
[»] scaffold0199 (1 HSPs)
scaffold0199 (134-196)||(8451-8513)
[»] scaffold0016 (1 HSPs)
scaffold0016 (129-197)||(32418-32485)
[»] scaffold0051 (1 HSPs)
scaffold0051 (121-197)||(52870-52946)
[»] scaffold1175 (1 HSPs)
scaffold1175 (121-196)||(2426-2501)
[»] scaffold0160 (1 HSPs)
scaffold0160 (129-196)||(29143-29210)
[»] scaffold0026 (2 HSPs)
scaffold0026 (121-196)||(97366-97441)
scaffold0026 (132-196)||(5964-6028)
[»] scaffold1712 (1 HSPs)
scaffold1712 (122-196)||(607-681)
[»] scaffold0068 (1 HSPs)
scaffold0068 (121-197)||(41644-41719)
[»] scaffold0171 (1 HSPs)
scaffold0171 (130-197)||(11419-11486)
[»] scaffold0028 (1 HSPs)
scaffold0028 (132-195)||(27903-27966)


Alignment Details
Target: chr2 (Bit Score: 109; Significance: 6e-55; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 38234508 - 38234624
Alignment:
Q  8 gacatcatcatatatgtttgtacttttaagttataataattaacatcaaaacaaagagtttctaaagtattttctaaattttcaaatgttatataactaa 107  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38234508 gacatcatcatatatgtttgtcctttcaagttataataattaacatcaaaacaaagagtttctaaagtattttctaaattttcaaatgttatataactaa 38234607  T
Q  108 tttgaaccattgaaaac 124  Q
    |||||||||||||||||    
T  38234608 tttgaaccattgaaaac 38234624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 44946128 - 44946052
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  44946128 aaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 44946052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 44929921 - 44929846
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||| |||| |||||||||||||    
T  44929921 aaacgggacccccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagtttt 44929846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 15038089 - 15038157
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  15038089 cccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 15038157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 6714370 - 6714295
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||    
T  6714370 aaacgggactcccgcaagtggacggtgagattggtcccctcaaattagtcgattcttggattggataccgagtttt 6714295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 11941285 - 11941210
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  11941285 aaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 19054155 - 19054224
Alignment:
Q  128 ccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||| ||||||||||||||| |||  |||||||||||||| |||||||||||||||||||    
T  19054155 ccccccgcaagtgggcggtgggattggtccgctcggattagtcgattcttggatcagataccgagttttc 19054224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 35171922 - 35171998
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  ||||||||||||||  ||| ||||||||||||||    
T  35171922 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 35171998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 18976521 - 18976454
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||| |||||    
T  18976521 ccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaattttc 18976454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 25293285 - 25293356
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||| || ||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  25293285 gggccccccgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 25293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 4769288 - 4769354
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagata 187  Q
    |||||||  |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||    
T  4769288 aaacgggggccccgcaagtggacggtgaggttggtcccctcaaattagtcgattcttagatcggata 4769354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 41314123 - 41314189
Alignment:
Q  131 cccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||| |||| |||||| |||||||    
T  41314123 cccgcaagtggacggtgggattggtcccctcagattaatcgattcttcgatcggataccaagttttc 41314189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 2140554 - 2140485
Alignment:
Q  128 ccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||| || |||| ||||||||||||||    
T  2140554 ccccccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagttttc 2140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 18692090 - 18692158
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||| ||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  18692090 cccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagttttc 18692158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 28668995 - 28669071
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||| ||||||| |||||||||||||||||||  ||||||||||| || |||| ||||||||||||||    
T  28668995 aaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggataccgagttttc 28669071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 33827648 - 33827572
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| |||| |||||||| ||||||||||||||||||   |||||||||||||| |||| ||||||||||||||    
T  33827648 aaacgggacccctgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccgagttttc 33827572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 38784247 - 38784181
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||||||| ||||| |||| ||| |||||| ||||||||||||| ||||||||||||    
T  38784247 ccccgcaagtggacggtgagattgatcccttcagattagttgattcttagatcaaataccgagtttt 38784181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 34516481 - 34516413
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||| |||||||| |||||||||||||||||||  |||||||||||||| |||| |||||| |||||||    
T  34516481 cccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttttc 34516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 43374397 - 43374329
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||  |||||||||||||||| ||  |||||||||||||| |||| ||||||||||||||    
T  43374397 cccccgcaagtgagcggtgggattggtcccttcggattagtcgattcttggatcggataccgagttttc 43374329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 714192 - 714125
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||| ||| ||||||| || ||||||||| ||||||||||||||||||  |||||||||||||    
T  714192 cccccgcaaatgggcggtgggtttcgtcccctcagattagtcgattcttagattggataccgagtttt 714125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 14486948 - 14487023
Alignment:
Q  122 aacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||| |||| |||||||| |||||||||||||||||||  |||||||| | ||| |||| ||||||||||||||    
T  14486948 aacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 14487023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 17324895 - 17324961
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||||| |||| |||| ||||||||    
T  17324895 cccccacaagtgggcggtgggattagtcccctcaaattagtcgattctt-gatcggatatcgagtttt 17324961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 24196133 - 24196200
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||| |||||||||||||||||||  ||||||||||| || |||  ||||||||||||||    
T  24196133 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattttttgattggataccgagttttc 24196200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 30466897 - 30466830
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||| | |||||||||||||| ||  |||||||||||||| |||| |||||||||||||    
T  30466897 cccccgcaagtgggcagtgggattggtcccttcggattagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 31778161 - 31778228
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||||| ||||||||| |||| |||||||  ||||| |||| |||||||||||||    
T  31778161 cccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 1845102 - 1845048
Alignment:
Q  143 cggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||| |||||||||||||||||||||||||||| | || ||||||||||||||    
T  1845102 cggtggaattggtcccctcaaattagtcgattcttggctcggataccgagttttc 1845048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 6006952 - 6006890
Alignment:
Q  134 gcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||| |||||||| ||||| |||||||||| |||  |||||||||||||||||    
T  6006952 gcaagtggacggtgtgattggtctcctcagattagtcgatccttgaatcagataccgagtttt 6006890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 13266636 - 13266686
Alignment:
Q  146 tgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||||||    
T  13266636 tgggattggtcccctcaaattagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 18708598 - 18708659
Alignment:
Q  120 aaaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagat 181  Q
    |||||||| ||||||||| ||||||||||||||| |||||||| |||||||| | |||||||    
T  18708598 aaaacgggacccccgcaaatggacggtgggattgatcccctcagattagtcggtacttagat 18708659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 27269409 - 27269344
Alignment:
Q  131 cccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||| ||||||||||| |||||||  |||||||||||||| |||  |||||||||||||    
T  27269409 cccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 36242387 - 36242319
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatacc 189  Q
    |||||||  |||||||||||| |||||||||||||||||||  |||| ||||||||| |||| ||||||    
T  36242387 aaacggggtccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggatacc 36242319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 8192422 - 8192351
Alignment:
Q  126 ggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||| ||||||||| |||||||||||| ||||||  |||||||| | ||| |||| ||||||||||||||    
T  8192422 ggcccctcgcaagtgggcggtgggattgggcccctcggattagtcggtccttggatcggataccgagttttc 8192351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 19849963 - 19850029
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||| ||||| ||||||||| ||||||||| ||||||||| |||| ||||| |||||||    
T  19849963 cccccgcaagtgggcggtgagattggtcctctcaaattaatcgattcttggatc-gatactgagtttt 19850029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 28194212 - 28194137
Alignment:
Q  122 aacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||| ||||||||||| | |||||||||||||| | ||| |||||||| | ||| |||| ||||||||||||||    
T  28194212 aacggggcccccgcaagtaggcggtgggattggtctcgtcagattagtcggtccttggatcggataccgagttttc 28194137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 41329972 - 41330039
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||| ||||||| ||||| |||||||||||||| |||||||| ||||| || | |||||||||||||    
T  41329972 cccccacaagtgggcggtgagattggtcccctcagattagtcggttcttggaccggataccgagtttt 41330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 4852660 - 4852726
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||||| ||||||||||||  |||| ||||||||| |||| ||| || ||||||    
T  4852660 ccccgcaagtggacggtggaattggtcccctcggattaatcgattcttggatcggatgccaagtttt 4852726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 32845206 - 32845264
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagata 187  Q
    |||| |||||||| |||||||||||||||| || |||||||||||||||| || |||||    
T  32845206 cccctgcaagtgggcggtgggattggtcccttcgaattagtcgattcttaaattagata 32845264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 13747560 - 13747499
Alignment:
Q  136 aagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||||| ||||||| ||| |||||| ||| |||| |||||||| |||||    
T  13747560 aagtggacggtgggattgggcccctcagatttgtcgatccttggatcggataccgaattttc 13747499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 31439457 - 31439396
Alignment:
Q  134 gcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    |||||| | |||||||||| || ||||||||||| ||| | |||||||||||||||||||||    
T  31439457 gcaagtaggcggtgggatttgttccctcaaattaatcggtccttagatcagataccgagttt 31439396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 39957891 - 39957956
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||| || |||||||||| |||||  |||||||||||||| |||  ||||||||||||||    
T  39957891 ccgcaagtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagttttc 39957956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 9401028 - 9400961
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||| | |||||||||||  ||| | |||||||||||||| |||| ||||| |||||||    
T  9401028 cccccgcaagtgggcagtgggattggtttccttagattagtcgattcttggatcggatactgagtttt 9400961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 26176265 - 26176223
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcg 171  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||    
T  26176265 cccccgcaagtggacggtgggattggacccttcagattagtcg 26176223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 44026807 - 44026753
Alignment:
Q  142 acggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||| ||||| ||||||||||||| ||| |||||||||| | |||||||||||    
T  44026807 acggtgagattgatcccctcaaattaatcggttcttagatcggttaccgagtttt 44026753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 1501511 - 1501463
Alignment:
Q  148 ggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  1501511 ggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 1501463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 5394150 - 5394215
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||| |||||||||||||||  ||  |||||||| | |||||||| |||||||| |||||    
T  5394150 ccgcaagtgggcggtgggattggtccgttcggattagtcggtccttagatcggataccgaattttc 5394215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 8259022 - 8259095
Alignment:
Q  124 cgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||| ||||||||||| | |||||||||| || || ||  |||||||||||||| |||| ||||| ||||||||    
T  8259022 cggggcccccgcaagtaggcggtgggattagttccttcggattagtcgattcttggatcggatactgagttttc 8259095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 9946686 - 9946723
Alignment:
Q  160 tcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||| | |||||||||||||||||||||||    
T  9946686 tcaaattagtcggtccttagatcagataccgagttttc 9946723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 3943862 - 3943938
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| | |||||||||||  |||||||||||||||||   |||||||| || || |||| |||||| |||||||    
T  3943862 aaacggggctcccgcaagtgggtggtgggattggtccccttggattagtcggttattggatcggataccaagttttc 3943938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 19893200 - 19893240
Alignment:
Q  137 agtggacggtgggattggtcccctcaaattagtcgattctt 177  Q
    ||||||||||| |||||||| ||| ||||||||||||||||    
T  19893200 agtggacggtgagattggtctccttaaattagtcgattctt 19893240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 44976224 - 44976172
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattctt 177  Q
    |||| |||||||||||| ||||||||||| |||| ||  ||||||||||||||    
T  44976224 gggctccccgcaagtgggcggtgggattgatcccttcggattagtcgattctt 44976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 39214 - 39290
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  39214 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttc 39290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 29861796 - 29861872
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  29861796 aaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttagatcggataccgagttttc 29861872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 42913588 - 42913512
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| |||||||||||||||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||    
T  42913588 aaacggggcccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagttttc 42913512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 17197025 - 17196950
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  17197025 aaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 11997983 - 11998051
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  11997983 cccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 11998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 16374120 - 16374196
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||| |||||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  16374120 aaacgggacccccgcaaatggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 16374196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 22120014 - 22120090
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  22120014 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 22120090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 27312286 - 27312354
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  27312286 cccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 27312354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 31197716 - 31197792
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||| |||| |||| |||||||||    
T  31197716 aaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcgagttttc 31197792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 40542985 - 40542909
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  40542985 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 40542909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 2751397 - 2751473
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||| ||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  2751397 aaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2751473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 21835277 - 21835353
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| |||| |||||||||    
T  21835277 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatatcgagttttc 21835353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 22703612 - 22703688
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| |||||| |||||||    
T  22703612 aaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattctttgatcggatacccagttttc 22703688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 23092222 - 23092298
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||| |||||||||||||||||||||||  |||||||||||| | |||| ||||||||||||||    
T  23092222 aaacggggcccccgcaaatggacggtgggattggtcccctcggattagtcgattcatggatcggataccgagttttc 23092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 27009501 - 27009561
Alignment:
Q  136 aagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  27009501 aagtggacggtgggattggtcccctcaaattagtcgattcttggattggataccgagtttt 27009561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 3851883 - 3851958
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| ||||||||||| |||||||  |||||||||||||| |||| |||||||||||||    
T  3851883 aaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttt 3851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 7275411 - 7275478
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  7275411 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 39145719 - 39145652
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||    
T  39145719 cccctgcaagtggacggtgggattggtcccctcgaattagtcgattcttgaatcagataccaagtttt 39145652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 654772 - 654704
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||  |||||||| ||||| |||| ||||||||||||||    
T  654772 cccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccgagttttc 654704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 7175929 - 7175861
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||| ||||||||    
T  7175929 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagttttc 7175861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 21217908 - 21217832
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| ||||||| ||||||||||| |||||||  |||||| ||||||| |||| ||||||||||||||    
T  21217908 aaacgggccccccacaagtgggcggtgggattgatcccctcggattagttgattcttggatcggataccgagttttc 21217832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 31712974 - 31712902
Alignment:
Q  124 cgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||| ||| ||||||||| |||||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  31712974 cgggaccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 18044233 - 18044308
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||| |||||||  ||||| ||||||||||||| |||||||||||||| |||| |||||||||||||    
T  18044233 aaacggggcccccacaagtgggtggtggaattggtcccctcagattagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 22638414 - 22638488
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||||| || |||||||||| ||||||||||| || |||| ||||||||||||||| |||| ||||||||||||    
T  22638414 aaacggggcctccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 23330815 - 23330738
Alignment:
Q  120 aaaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||| || |||||||||| ||||  |||||||||||||||||||||| || ||| |||| ||||||||||||||    
T  23330815 aaaacgggacctccgcaagtgggcggtaagattggtcccctcaaattagtcaatccttggatcggataccgagttttc 23330738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 2344425 - 2344501
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||  |||||||||||||||||||  |||||||| | ||| |||| ||||||||||||||    
T  2344425 aaacgggacccccgcaagtgagcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 2344501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 28089953 - 28090021
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| || || |||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  28089953 cccccgcaagtgggcgatgagattggtcccctcggattagtcgattcttggatcggataccgagttttc 28090021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 47541510 - 47541570
Alignment:
Q  122 aacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatc 182  Q
    |||||||||||||||||||||| |||| ||||||||||| | |||||||||| ||||||||    
T  47541510 aacgggccccccgcaagtggacagtggaattggtccccttagattagtcgatccttagatc 47541570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 10091323 - 10091389
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||| ||||||||||| |||||||  |||||||||||||| |||| ||||||||||||||    
T  10091323 ccccgcaagtgggcggtgggattgatcccctcggattagtcgattctt-gatccgataccgagttttc 10091389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 17279666 - 17279733
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||  |||||||||||||||||||||||||||||||| |  || |||| ||||||||||||||    
T  17279666 ccccgcaaacggacggtgggattggtcccctcaaattagtcggtctttggatcggataccgagttttc 17279733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 25333529 - 25333603
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||| |||||||||||||||| | |||||||||||||||||  |||||||||||||| |||| || ||||||||||    
T  25333529 aaacaggccccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttggatcgga-accgagtttt 25333603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 27704135 - 27704202
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||  |||| ||||| |||||||| ||||||||||||||  |||||||||||||||||    
T  27704135 cccccgcaagtgggtggtgtgattgatcccctcagattagtcgattcttgaatcagataccgagtttt 27704202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 32849732 - 32849791
Alignment:
Q  136 aagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    |||||| | |||||||||||||||||| |||||||||||||| |||| ||||||||||||    
T  32849732 aagtgggcagtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 41907580 - 41907514
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||  |||||||||||||||| || |||||||||||||| |||| |||||||||||||    
T  41907580 cccccgcaagtgggtggtgggattggtcccc-cagattagtcgattcttggatcggataccgagtttt 41907514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 33137887 - 33137825
Alignment:
Q  134 gcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||| |||||  |||||||||||| |||||||||||||||||||| |||| ||||||||    
T  33137887 gcaagtgggcggtgaaattggtcccctcgaattagtcgattcttagatcggatatcgagtttt 33137825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 17212178 - 17212247
Alignment:
Q  120 aaaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatacc 189  Q
    |||||||| |||| |||||||   ||||||||||||||||||  |||||||||||||| |||||||||||    
T  17212178 aaaacgggacccctgcaagtgagtggtgggattggtcccctcggattagtcgattcttggatcagatacc 17212247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 31274050 - 31274115
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||| | ||| ||||||||||||| ||||||||||||||| || | ||||||||||||||    
T  31274050 ccgcaagtgggcagtgagattggtcccctcgaattagtcgattcttggaccggataccgagttttc 31274115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 8943469 - 8943409
Alignment:
Q  128 ccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatac 188  Q
    |||||||||||||| ||||| ||||||||||||  ||||||||||||||| |||| |||||    
T  8943469 ccccccgcaagtgggcggtgtgattggtccccttgaattagtcgattcttggatcggatac 8943409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 19421371 - 19421431
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||||| |||||||||||||| ||||  ||||||||||||||  ||||||||||||||||    
T  19421371 caagtgggcggtgggattggtctcctcggattagtcgattcttgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 23012575 - 23012507
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||| ||||||| |||||||||||||||||||  ||||||| |||| | |||| ||||||||||||||    
T  23012575 cccccacaagtgggcggtgggattggtcccctcgtattagtcaattcattgatcggataccgagttttc 23012507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 43785374 - 43785298
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| || |||||||||||||||| ||||||||||||   ||||||||||| || |||| ||||||||| ||||    
T  43785374 aaacggggcctccgcaagtggacggtgagattggtccccttggattagtcgatttttggatcggataccgagctttc 43785298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 25102875 - 25102809
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||| |||||||||||||| || ||  |||||||||||||| ||||||||||||| ||||    
T  25102875 cccccgcaagtg-acggtgggattggttccttcggattagtcgattcttggatcagataccgattttt 25102809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 28950997 - 28951072
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||| ||||||| | ||||||||||||||||||| || ||| | |||||| |||| |||||||||||||    
T  28950997 aaacgggtccctcgcaagtcggcggtgggattggtcccctcgaactagacaattcttggatcggataccgagtttt 28951072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 11910015 - 11909954
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||  || ||||| ||||||||    
T  11910015 caagtggacggtgggattggtcctctcgaattagtcgatccttgaattagatatcgagtttt 11909954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 674496 - 674436
Alignment:
Q  136 aagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||||||| |||||||| |||||||| | |||||||| || ||||| ||||    
T  674496 aagtggacggtgggattgatcccctcagattagtcggtccttagatcggacaccgaatttt 674436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 2103189 - 2103255
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| ||||||||||||| |||||  |||||||||||| | |||| ||||||||||||||    
T  2103189 cccccgcaagtgggcggtgggattggt-ccctcggattagtcgattcat-gatcggataccgagttttc 2103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 21574176 - 21574101
Alignment:
Q  122 aacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||| ||||| ||||| | ||||| |||||||||||||  |||||||| | ||| |||| ||||||||||||||    
T  21574176 aacggggcccccacaagtaggcggtgagattggtcccctcggattagtcggtccttggatcggataccgagttttc 21574101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 22643405 - 22643342
Alignment:
Q  133 cgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||| ||||| |||| ||||||||  |||| ||||||||| ||||||||||| ||||||    
T  22643405 cgcaagtggccggtgtgattagtcccctcggattaatcgattctttgatcagataccaagtttt 22643342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 30345562 - 30345511
Alignment:
Q  143 cggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtt 194  Q
    |||||||||||||||||||   ||||||| |||||||||| |||||||||||    
T  30345562 cggtgggattggtcccctcgggttagtcggttcttagatcggataccgagtt 30345511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 36772378 - 36772303
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||  ||||| |||||| ||| |||| |||  |||||||||||||| |||| |||||||||||||    
T  36772378 aaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgattctttgatcggataccgagtttt 36772303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 28647096 - 28647170
Alignment:
Q  122 aacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||| ||||| ||||||| ||||||||||||| ||||| ||||||||  | ||| |||| |||| ||||||||    
T  28647096 aacggggcccccacaagtgggcggtgggattggttccctcgaattagtctgtccttggatcggatatcgagtttt 28647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 13332466 - 13332433
Alignment:
Q  164 attagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||| |||||||||||||||||||    
T  13332466 attagtcgattcttggatcagataccgagttttc 13332433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 21373836 - 21373872
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcc 157  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  21373836 aaacggggcccccgcaagtggacggtgagattggtcc 21373872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 38373043 - 38372979
Alignment:
Q  133 cgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||||||||||| |||||   |||||||| | ||| | |||||||| ||||||||    
T  38373043 cgcaagtggacggtgggattggaccccttggattagtcggtccttgggtcagatactgagttttc 38372979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 1345057 - 1345133
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||| ||||||||||||||    
T  1345057 aaacgggccccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttttc 1345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 34147468 - 34147544
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  34147468 aaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34147544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 34160084 - 34160160
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  34160084 aaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34160160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 28672189 - 28672264
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||| ||||||||| |||||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  28672189 aaacgggcccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 5360138 - 5360071
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  5360138 cccccacaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 15360173 - 15360097
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||| ||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  15360173 aaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 15360097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 3222702 - 3222635
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  3222702 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 9239105 - 9239171
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||    
T  9239105 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 21982395 - 21982320
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| ||||||||||||| |||||  |||||||||||||| |||| ||||||||||||||    
T  21982395 aaacggggcccccgcaagtgggcggtgggattggt-ccctcggattagtcgattcttggatcggataccgagttttc 21982320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 654221 - 654146
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| | ||||||||||| |||||||||||||||||||  ||||||||||| || |||| |||||||||||||    
T  654221 aaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 9208382 - 9208449
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||| |||||||||||||| ||||| | |||||||||||| ||||| ||||||||||||    
T  9208382 cccccgcaagtgggcggtgggattggtctcctcagaatagtcgattcttggatcaaataccgagtttt 9208449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 9690713 - 9690638
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||| | ||||||||||||||||||||||| |||  |||||||||||||| |||| |||||||||||||    
T  9690713 aaacggggccctcacaagtggacggtgggattggtcctctcggattagtcgattcttggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 11448993 - 11449068
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| |||||||||||||||||||  ||||||||||||||  ||| |||| ||||||||    
T  11448993 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 21148577 - 21148510
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||||  ||| ||||||||||||||    
T  21148577 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 21148510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 11007290 - 11007363
Alignment:
Q  124 cgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||| ||||||||||||| |||||||||||| ||||||  |||||||||||||| |||| |||||| |||||||    
T  11007290 cggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattctttgatcggatacctagttttc 11007363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 17149523 - 17149458
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtt 194  Q
    |||||||||||| |||||||||||||||||||| ||||||||| | |||  |||||||||||||||    
T  17149523 cccccgcaagtgaacggtgggattggtcccctcgaattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 11841037 - 11841097
Alignment:
Q  136 aagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||| |||||||| |||||||||||| || |||| |||||||||||||    
T  11841037 aagtggacggtgggattagtcccctcgaattagtcgattattggatcggataccgagtttt 11841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 14213004 - 14213080
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||  ||||||||||||  |||||||||||||| |||  |||||||||||||| |||| ||||||||||||||    
T  14213004 aaacgggggccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttc 14213080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 9844060 - 9844136
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||| ||||||| ||||| |||||||||| ||  |||||||||||||| |||| |||| |||||||||    
T  9844060 aaacggggccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggatatcgagttttc 9844136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 17081121 - 17081053
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| ||||||||||||||||||| ||| ||| | ||||| ||||  |||||||||||||    
T  17081121 cccccgcaagtgggcggtgggattggtcccctcgaataagttgtttcttggatcgaataccgagttttc 17081053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 12390555 - 12390620
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||  |||||||||   ||| ||| ||||||||||||||    
T  12390555 cccccgcaagtgggcggtgggattggtcccctcggattagtcga---ttaaatcggataccgagttttc 12390620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 14504148 - 14504082
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||| ||||||||||| ||| ||| ||||||||||| |||  ||| |||||||||||||    
T  14504148 ccccgcaagtgggcggtgggattgatcctctcgaattagtcgatccttgtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 33718544 - 33718478
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagata 187  Q
    ||||||| || | |||||||||||||||||||| |||||||  |||||||||||||| |||| ||||    
T  33718544 aaacggggcctctgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggata 33718478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 27866268 - 27866216
Alignment:
Q  131 cccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatca 183  Q
    ||||||||||| |||||||||| |||||||| |||||||||||| || |||||    
T  27866268 cccgcaagtgggcggtgggattagtcccctcgaattagtcgatttttggatca 27866216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 15730562 - 15730495
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||| || |||| |||||||||||||| ||||  |||||||||||||| |||| |||| ||||||||    
T  15730562 cccccacacgtgggcggtgggattggtcacctcggattagtcgattctttgatcggatatcgagtttt 15730495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 17225797 - 17225863
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||| ||| ||||||||||| || ||||| |||||||| | |||||||| |||| ||||||||    
T  17225797 ccccgcaaatgggcggtgggattgatctcctcagattagtcggtccttagatcggatatcgagtttt 17225863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 16531282 - 16531319
Alignment:
Q  133 cgcaagtggacggtgggattggtcccctcaaattagtc 170  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  16531282 cgcaagttgacggtaggattggtcccctcaaattagtc 16531319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 21903682 - 21903618
Alignment:
Q  134 gcaagtggacggtgggattggtcccc-tcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||| |||||||| |||||||| ||| |||||||||||||| |||| ||| | ||||||||    
T  21903682 gcaagtgggcggtgggaatggtccccctcagattagtcgattcttggatcggatgcagagttttc 21903618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 7e-24; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 45787771 - 45787703
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  45787771 cccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 45787703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 34844833 - 34844757
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  34844833 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34844757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 36131585 - 36131509
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| |||||| |||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  36131585 aaacgggacccccgtaagtgggcggtgggattggtcccctcggattagtcgattattagatcagataccgagttttc 36131509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 40058927 - 40058851
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  40058927 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 40058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 51535747 - 51535818
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| ||||    
T  51535747 gggcccccagcaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgaatttt 51535818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 52983741 - 52983815
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||    
T  52983741 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 5609269 - 5609201
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||||| |||| ||||||||||||||    
T  5609269 cccccgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttc 5609201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 44343636 - 44343712
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| | ||||||||||| ||||||||||||||||||| |||||||||||||||  ||| ||||||||||||||    
T  44343636 aaacggggctcccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagttttc 44343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 23639758 - 23639821
Alignment:
Q  133 cgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  23639758 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 23645416 - 23645479
Alignment:
Q  133 cgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  23645416 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 27528868 - 27528794
Alignment:
Q  123 acgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||| ||||||||||||| ||||| |||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  27528868 acggggcccccgcaagtgggcggtgagattggtcccctcggattagtcgattcttggatcggataccgagttttc 27528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 52494623 - 52494685
Alignment:
Q  134 gcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  52494623 gcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 52494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 19660599 - 19660531
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| ||||||||||| |||||||  |||||||||||||| |||| ||||||||||||||    
T  19660599 cccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttc 19660531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 32986327 - 32986395
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||  | |||||||||||| |||| ||||||||||||||    
T  32986327 cccccgcaagtgggcggtgggattggtcccctcggaatagtcgattcttggatcggataccgagttttc 32986395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 46714515 - 46714591
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  ||||||| ||||||  ||| ||||||||||||||    
T  46714515 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttgaatcggataccgagttttc 46714591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 9978576 - 9978509
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||| |||||||||||||||| ||  |||||| |||||||||||| |||||||||||||    
T  9978576 cccccgcaagtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagtttt 9978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 20566480 - 20566547
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||| || ||||||||||||||||| |||||||||||||| |||| |||| ||||||||    
T  20566480 cccccgcaagtgggcgctgggattggtcccctcagattagtcgattcttggatcggatatcgagtttt 20566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 30879228 - 30879165
Alignment:
Q  134 gcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||||||||||| |||||| |||| ||||||||| ||||||||||||| |||||    
T  30879228 gcaagtggacggtgggattggttccctcagattaatcgattcttggatcagataccgaattttc 30879165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 34723921 - 34723996
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| |||||||||||||  |||||||||||||| |||  |||||||||||||| |||| |||||||||||||    
T  34723921 aaacggggcccccgcaagtgggtggtgggattggtcctctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 23131497 - 23131435
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| |||| |||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  23131497 caagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagttttc 23131435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 4912056 - 4912124
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||  |||| ||||| ||||| | ||||||||||||||| |||||||||||||||||||    
T  4912056 cccccgcaagtgggtggtgtgattgatccccccgaattagtcgattcttggatcagataccgagttttc 4912124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 22488103 - 22488027
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||| ||| ||||||||||| ||||||||||||||||| | ||| |||| |||||| |||||||    
T  22488103 aaacggggcccccgcaaatgggcggtgggattgatcccctcaaattagtcggtccttggatcggataccaagttttc 22488027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 32990557 - 32990633
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  | |||||||||||| ||||  |||| ||||||||    
T  32990557 aaacggggcccccgcaagtgggcggtgggattggtcccctcggactagtcgattcttggatcgaatactgagttttc 32990633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 35229297 - 35229365
Alignment:
Q  128 ccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||| ||||||  ||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||    
T  35229297 ccccccacaagtgagcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaatttt 35229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 54127417 - 54127341
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||| ||||| || | ||||| ||||||||    
T  54127417 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggaccggatactgagttttc 54127341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 12824535 - 12824597
Alignment:
Q  134 gcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||||||||| | || ||||||||||||||| |||| ||||| |||||||    
T  12824535 gcaagtggacggtgggattggtctcatcgaattagtcgattcttggatcggatacggagtttt 12824597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 195
Target Start/End: Complemental strand, 42508452 - 42508382
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||||||| ||||||| |||| | |||||||||||| ||||||||| || |||||| |||||||||||||    
T  42508452 gggccccccacaagtgggcggttgaattggtcccctcgaattagtcggttattagattagataccgagttt 42508382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 20078059 - 20077986
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtt 194  Q
    ||||||| |||||| |||||| |||||||||| || |||||  |||||||||||||| |||| |||||||||||    
T  20078059 aaacggggcccccgtaagtgggcggtgggattagttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 28929815 - 28929876
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||| ||||||| ||||||| |||||||| | ||||||| ||||||||||||||    
T  28929815 caagtggacggttggattggacccctcagattagtcggtccttagattagataccgagtttt 28929876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 49287989 - 49288054
Alignment:
Q  131 cccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||| || || |||||||||||||  |||||||||||||| |||||||||| |||||||    
T  49287989 cccgcaagtgggcgctgagattggtcccctcggattagtcgattcttggatcagatactgagtttt 49288054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 34835656 - 34835726
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||| || || |||||||||||||  |||||||||||||||||||  |||| |||||||    
T  34835656 gggccccccgcaagtgggcg-tgagattggtcccctcggattagtcgattcttagatcgaatactgagtttt 34835726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 33289181 - 33289251
Alignment:
Q  126 ggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||  ||||||||||||| |||| ||||||||  |||||||||||||| |||| ||||||| |||||    
T  33289181 ggccccctacaagtggacggtgagattagtcccctcggattagtcgattcttggatcggataccgggtttt 33289251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 47464174 - 47464108
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||||| ||||||| ||| |||||||||| | |||  |||||||||||| ||||    
T  47464174 ccccgcaagtggacggtggaattggtctccttaaattagtcggtccttgaatcagataccgaatttt 47464108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 10143791 - 10143828
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaatta 167  Q
    |||||||||||||||||||||||||||||||| |||||    
T  10143791 ccccgcaagtggacggtgggattggtcccctcgaatta 10143828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 51961993 - 51962034
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgat 173  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  51961993 ccgcaagtggacggtgggattggtcccctcgaattaatcgat 51962034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 25852336 - 25852412
Alignment:
Q  120 aaaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||| ||| ||||||||| |  ||||||||||||||||  |||||||| ||||| || | |||||||||||||    
T  25852336 aaaacgggaccctcgcaagtgggcaatgggattggtcccctcggattagtcggttcttggaccggataccgagtttt 25852412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 32942492 - 32942532
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctc 161  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  32942492 aaacggcccccccacaagtggacggtgggattggtcccctc 32942532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 43719154 - 43719086
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||| |||||| ||||||||||||||  |||  |||||||||||||| |||| |||||||| |||||    
T  43719154 cccccgaaagtgggcggtgggattggtcatctcggattagtcgattcttggatcggataccgaattttc 43719086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 4064990 - 4065057
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||| ||||||| |||||||||||||||||||  ||||||||||| || |||| |||| ||| ||||    
T  4064990 cccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggatatcgaatttt 4065057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 13017836 - 13017910
Alignment:
Q  122 aacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||| ||||||||||||| | ||||||||||||| |||  |||||||| | ||| |||| ||||||||||||||    
T  13017836 aacgggacccccgcaagtgggcagtgggattggtccactcggattagtcggtccttggatc-gataccgagttttc 13017910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 13486364 - 13486293
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||||| |||||||| | ||||||| |||||||  ||||| |  || ||||||||||||    
T  13486364 gggccccccgcaagtggacagtgggatttgacccctcagattagtcagttcttgggccaaataccgagtttt 13486293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 13771557 - 13771482
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| | |||||||||||| | || ||||||||||||  ||||||||| ||||| |||| |||||||| ||||    
T  13771557 aaacggggctcccgcaagtggatgatgagattggtcccctataattagtcggttcttggatcggataccgaatttt 13771482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 33696346 - 33696279
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||| ||||| ||||||||| |||  ||||||| |||||| |||| |||| ||||||||    
T  33696346 cccccgcaagtgggcggtgagattggtcctctcggattagtcaattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 40252421 - 40252472
Alignment:
Q  131 cccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatc 182  Q
    ||||||||||| ||||| |||||||| |||||||||||||| || |||||||    
T  40252421 cccgcaagtgggcggtgagattggtctcctcaaattagtcggtttttagatc 40252472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 40307677 - 40307736
Alignment:
Q  137 agtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||| |||| ||||||| ||||||| | | ||||||||||||||| ||||||    
T  40307677 agtggacggtggaattgatcccctcgaattagttggtccttagatcagataccaagtttt 40307736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 51595144 - 51595219
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||  ||||||||||||||||||| |||| || | ||  |||| ||||||||| |||| |||||||||||||    
T  51595144 aaacgggatccccgcaagtggacggtggaattgatctcttcggattaatcgattcttggatcggataccgagtttt 51595219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 9517716 - 9517650
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagata 187  Q
    ||||||| |||||||| ||||  |||| |||||||||||||  |||||||||||||| |||| ||||    
T  9517716 aaacggggcccccgcaggtgggtggtgagattggtcccctcggattagtcgattcttggatcggata 9517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 55158409 - 55158343
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||| |||  ||||||||||||||||||  ||||||||||| || |||| || ||||||||||    
T  55158409 ccccgcaaatgggtggtgggattggtcccctcggattagtcgatttttggatcggaaaccgagtttt 55158343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 11109408 - 11109460
Alignment:
Q  133 cgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagat 186  Q
    ||||||||||||||| ||||| | |||||| ||||||||| |||||||||||||    
T  11109408 cgcaagtggacggtgtgattgattccctcatattagtcga-tcttagatcagat 11109460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 17637912 - 17637852
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| |||||  ||||||||||||  |||||||||||||| |||| |||||||||||||    
T  17637912 caagtgggcggtgatattggtcccctcggattagtcgattctt-gatcggataccgagtttt 17637852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 20527100 - 20527035
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||| |||||| |||| ||||||||| ||||  ||||||||||| || ||||| |||||||||||    
T  20527100 ccccgtaagtgggcggtaggattggtctcctcggattagtcgatttttggatcaaataccgagttt 20527035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 21387560 - 21387486
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||  |||||||||||| |||||||  ||||||||||  ||||||||||| || |||| |||||| |||||||    
T  21387560 aaacgggatccccgcaagtgggcggtggg--tggtcccctcggattagtcgattattggatcggataccaagttttc 21387486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 43352391 - 43352338
Alignment:
Q  144 ggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||| |||||||| ||||| |||| |||||||||  ||||||||||||||||||    
T  43352391 ggtgagattggtctcctcagattaatcgattcttgaatcagataccgagttttc 43352338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 7093508 - 7093568
Alignment:
Q  136 aagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||| |||||||||||||||| || ||||||||| | ||| |||| |||| ||||||||    
T  7093508 aagtgggcggtgggattggtcccttcgaattagtcggtccttggatcggatatcgagtttt 7093568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 7392024 - 7391964
Alignment:
Q  137 agtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||| ||||||||||| |||||||  |||||||| ||||| |||  ||||||||||||||    
T  7392024 agtgggcggtgggattgttcccctcggattagtcggttcttcgattggataccgagttttc 7391964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 8158394 - 8158434
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtc 170  Q
    |||||||||||||||||||||||||| |||| | |||||||    
T  8158394 ccccgcaagtggacggtgggattggttccctaagattagtc 8158434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 8442101 - 8442049
Alignment:
Q  145 gtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||| ||||  |||||||||||| |||||| |||||||| |||||    
T  8442101 gtgggattggtctcctcggattagtcgattcctagatcggataccgaattttc 8442049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 18875568 - 18875516
Alignment:
Q  145 gtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||| |||||||  ||||||| ||| || |||||||||||||||||||    
T  18875568 gtgggattgatcccctcggattagtcaatttttggatcagataccgagttttc 18875516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 24672341 - 24672305
Alignment:
Q  160 tcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||||||| |||| |||||||||||||    
T  24672341 tcaaattagtcgattcttggatcggataccgagtttt 24672305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 27574448 - 27574516
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| ||||| | |||||||||||  |||| || |||||| |||| ||||| ||||||||    
T  27574448 cccccgcaagtgggcggtgagtttggtcccctcggattaatcaattcttggatcggatactgagttttc 27574516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 41085163 - 41085203
Alignment:
Q  137 agtggacggtgggattggtcccctcaaattagtcgattctt 177  Q
    ||||||||||||||||||||| ||| ||||||| |||||||    
T  41085163 agtggacggtgggattggtcctctcgaattagtggattctt 41085203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 10190817 - 10190741
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| |||||||||||||||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  10190817 aaacggggcccccgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10190741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 40133524 - 40133448
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  40133524 aaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 40133448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 8097354 - 8097278
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  8097354 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 10083894 - 10083818
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||| |||||||||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  10083894 aaacggggcccccacaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10083818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 15566567 - 15566499
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  15566567 cccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 15566499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 45529829 - 45529754
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  45529829 aaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 45529754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 32151546 - 32151621
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| ||||| ||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  32151546 aaacggggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 8958111 - 8958034
Alignment:
Q  120 aaaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||| ||| ||||||||||||| |||||||||||||||||||  |||| ||||||||| |||||||||||||||||||    
T  8958111 aaaatggggcccccgcaagtgggcggtgggattggtcccctctgattaatcgattcttggatcagataccgagttttc 8958034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 25289789 - 25289714
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| ||||||||||||| ||||| ||||||||||||||| |||| ||||||||||||||    
T  25289789 aaacggggcccccgcaagtgggcggtgggattggt-ccctcgaattagtcgattcttggatcggataccgagttttc 25289714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 26174243 - 26174311
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  26174243 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 26174311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 53233985 - 53233910
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  53233985 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 53233910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 53848501 - 53848433
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  53848501 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 53848433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 33398543 - 33398468
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| ||||||||||||| ||||| ||||||||||||||| |||| |||||||| ||||    
T  33398543 aaacggggcccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttggatcggataccgaatttt 33398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 49258337 - 49258262
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||| ||||||| |||||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  49258337 aaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 54475803 - 54475878
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| || |||||||||| ||||||||||||||||||   |||||||||||||| ||||||||||||||||||    
T  54475803 aaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagtttt 54475878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 7195933 - 7196005
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||| || |||| | |||||||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  7195933 gggccccccacatgtgggcagtgggattggtcccctcagattagtcgattctttgattagataccgagttttc 7196005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 8456225 - 8456149
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| | |||||||||||||||||  ||||||||||||||  ||| ||||||||||||||    
T  8456225 aaacggggcccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 8456149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 45272491 - 45272415
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||| || |||| |||| ||||||||||||||    
T  45272491 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagttgactcttggatcggataccgagttttc 45272415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 46576470 - 46576546
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||| |||||||||||||   |||||||||||||| |||| ||||||||||||||    
T  46576470 aaacggggcccccgcaagtgggcggtcggattggtccccttggattagtcgattcttggatcggataccgagttttc 46576546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 53424244 - 53424176
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||  |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  53424244 cccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 53424176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 18176962 - 18176887
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| |||||||||||||||| ||  |||||||||||||| |||| ||||| |||||||    
T  18176962 aaacggggcccccgcaagtgggcggtgggattggtcccatcggattagtcgattcttggatcggatacagagtttt 18176887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 24165781 - 24165714
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||| ||||||||||| |||||||  |||||||||||||| |||| ||||||||||||||    
T  24165781 ccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagttttc 24165714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 24407395 - 24407458
Alignment:
Q  133 cgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||| |||||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  24407395 cgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 34492650 - 34492575
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| |||||||||||||||  ||| |||||| ||||||| |||| |||||||||||||    
T  34492650 aaacggggcccccgcaagtgggcggtgggattggtccattcagattagttgattcttggatctgataccgagtttt 34492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 35493033 - 35493108
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||   ||||||||||||    
T  35493033 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggattgaataccgagtttt 35493108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 39041927 - 39041852
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| |||||||||||||  |||||||||||||| |||  |||||||||||||| |||| |||||||||||||    
T  39041927 aaacggggcccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 4048085 - 4048147
Alignment:
Q  134 gcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||||||||||||||  |||||| ||||||| |||| |||||||||||||    
T  4048085 gcaagtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagtttt 4048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 25379883 - 25379957
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||||| |||||||||| || |||||||||||||||||||  |||||||||||||| |||| ||||| ||||||    
T  25379883 aaacggggcccccgcaagcgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagttt 25379957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 52821702 - 52821636
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||| |||||| |||||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  52821702 ccccgtaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 50731298 - 50731237
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| |||||||||||||||||||| |||||||||| ||| |||| |||||||||||||    
T  50731298 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 50781556 - 50781617
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| |||||||||||||||||||| |||||||||| ||| |||| |||||||||||||    
T  50781556 caagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 51532919 - 51532987
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcag-ataccgagttttc 197  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||| |||| | |||||||||||||    
T  51532919 cccccgcaagtggacggtgggattggtcccctcagattagtcggttctt-gatccgaataccgagttttc 51532987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 30257754 - 30257822
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||| ||||||||||||  |||||||||||||| |||| |||||||| |||||    
T  30257754 cccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggataccgaattttc 30257822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 30807223 - 30807152
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||| |||| ||||||||||| ||  |||||||||||||| |||| ||||||||||||||    
T  30807223 gggccccccgcaagtgggcggtaggattggtccc-tcggattagtcgattcttggatcggataccgagttttc 30807152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 33698781 - 33698705
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| | ||||||| |||  |||||||||||||||||||||||||||||||||  |||| ||| ||||||||||    
T  33698781 aaacggggctcccgcaaatgggtggtgggattggtcccctcaaattagtcgattctcggatcggatgccgagttttc 33698705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 48977510 - 48977586
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| |||| |||||||| |||||||||||||||||||  |||||||| | ||| |||| ||||||||||||||    
T  48977510 aaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 48977586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 52455724 - 52455648
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||   ||||||||||||||||||  |||||||||||||| |||  ||||||||||||||    
T  52455724 aaacggggcccccgcaagtgactggtgggattggtcccctcggattagtcgattcttggattggataccgagttttc 52455648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 1692963 - 1693030
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||| |||||||||| | ||||||| ||||||||||||||  ||| |||||||||||||    
T  1692963 cccccgcaagtgggcggtgggatttgccccctcagattagtcgattcttgaatcggataccgagtttt 1693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 21363073 - 21363140
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||| ||||||||||||| |||||  |||| ||||||||| |||| |||||||||||||    
T  21363073 cccccgcaagtgggcggtgggattggttccctcggattaatcgattcttggatcggataccgagtttt 21363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 4252470 - 4252404
Alignment:
Q  122 aacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatac 188  Q
    ||||| |||||| |||||||||||||||||||||||||||  |||||||||| ||| |||| |||||    
T  4252470 aacggcccccccacaagtggacggtgggattggtcccctcggattagtcgatccttggatcggatac 4252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 6127575 - 6127625
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcg 171  Q
    |||| ||| |||||||| |||||||||||||||||||||||||||||||||    
T  6127575 aaacaggctccccgcaaatggacggtgggattggtcccctcaaattagtcg 6127625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 14997746 - 14997807
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||| || |||||||||||||||||| ||||| |||||||||  |||||||||||||||||    
T  14997746 caagtagaaggtgggattggtcccctcgaattaatcgattcttgtatcagataccgagtttt 14997807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 2511372 - 2511296
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| || |||||||||| |||||||||||||| |||| ||||||| |||||||  ||| |||||| |||||||    
T  2511372 aaacgggacctccgcaagtgggcggtgggattggtctcctcgaattagtagattcttgaatcggataccaagttttc 2511296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 40940947 - 40941023
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||| |||||||  ||| |||||||||||||| ||||| || ||||||  ||||||||||||||||||    
T  40940947 aaacggggcccccacaagtgggtggtaggattggtcccctcgaattactcaattcttgaatcagataccgagttttc 40941023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 55371370 - 55371302
Alignment:
Q  120 aaaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatac 188  Q
    |||||||| ||| ||||||||| |||||||||||||||||||  |||||||||| ||| |||| |||||    
T  55371370 aaaacggggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 7485597 - 7485531
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||| |||||||| |||||||||||||||| ||  |||||||||||||| |||| |||||||||||||    
T  7485597 cccctgcaagtggccggtgggattggtccc-tcggattagtcgattcttggatcggataccgagtttt 7485531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 31537905 - 31537838
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||| |||||||| ||||| ||||||||||||| |||||||| |||||| |||| |||| ||||||||    
T  31537905 cccctgcaagtgggcggtgagattggtcccctcgaattagtcaattcttggatcggatatcgagtttt 31537838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 40302714 - 40302671
Alignment:
Q  128 ccccccgcaagtggacggtgggattggtcccctcaaattagtcg 171  Q
    |||||||||| |||||||||||||||| ||||||||||||||||    
T  40302714 ccccccgcaattggacggtgggattggacccctcaaattagtcg 40302671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 48105007 - 48105073
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||| ||||||| ||||| |||||||||| ||  |||||||||||||| |||| ||||||||||||    
T  48105007 cccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 3747730 - 3747779
Alignment:
Q  148 ggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  3747730 ggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3747779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 6041739 - 6041670
Alignment:
Q  127 gccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||| ||| ||||| ||||| |||||| | |||||||| ||||| ||||||||||||||||||    
T  6041739 gcccccctcaaatgggcggtgagattgttccccttagattagtcggttcttggatcagataccgagtttt 6041670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 17579199 - 17579134
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||| ||||| |||||||||||||| ||||||||||| || ||||  ||| |||||||||    
T  17579199 ccgcaagtgggcggtgagattggtcccctcagattagtcgatttttggatcgaatatcgagttttc 17579134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 23890672 - 23890713
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgat 173  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  23890672 ccgcaagtggacggtgagattggtcccctcagattagtcgat 23890713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 32094809 - 32094756
Alignment:
Q  144 ggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||| |||| |||||||| ||||| |||| ||||||||||||||    
T  32094809 ggtgggattggtcctctcatattagtcggttcttggatcggataccgagttttc 32094756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 25344132 - 25344057
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||| ||||| || |||||||||| || ||  |||||||||||||||||||  |||||||||||||    
T  25344132 aaacggggcccccgctagtgggcgatgggattggttcc-tcggattagtcgattcttagatcgaataccgagttttc 25344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 29915337 - 29915289
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattctt 177  Q
    ||||||||||||| ||||||||||| |||| || |||||||||||||||    
T  29915337 cccccgcaagtgggcggtgggattgatcccatcgaattagtcgattctt 29915289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 29964490 - 29964442
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattctt 177  Q
    ||||||||||||| ||||||||||| |||| || |||||||||||||||    
T  29964490 cccccgcaagtgggcggtgggattgatcccatcgaattagtcgattctt 29964442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 32414629 - 32414581
Alignment:
Q  143 cggtgggattggtcccctcaaattagtcgattcttagatcagataccga 191  Q
    ||||| ||||| |||||| ||||||||||||||||||||| ||||||||    
T  32414629 cggtgagattgatccccttaaattagtcgattcttagatcggataccga 32414581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 170
Target Start/End: Original strand, 33793584 - 33793623
Alignment:
Q  131 cccgcaagtggacggtgggattggtcccctcaaattagtc 170  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  33793584 cccgcaagtggacggtgggattggtcccctcggattagtc 33793623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 49030036 - 49030099
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    |||||| ||||||||| ||||||||| |||| |||||||| | |||| |||| |||||||||||    
T  49030036 ccgcaaatggacggtgagattggtcctctcagattagtcggtccttatatcatataccgagttt 49030099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 4462763 - 4462829
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||||||||||||| ||| |||  ||||||  |||||| |||  |||||||||||||    
T  4462763 ccccgcaagtggacggtgggattgatccactcggattagtttattcttggattggataccgagtttt 4462829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 10538189 - 10538151
Alignment:
Q  133 cgcaagtggacggtgggattggtcccctcaaattagtcg 171  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  10538189 cgcaagtggacagtgggattggacccctcaaattagtcg 10538151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 26158941 - 26159003
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccga 191  Q
    ||||||||||||| ||||||||||| |||||||  |||||||| | ||| |||| ||||||||    
T  26158941 cccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggataccga 26159003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 7469687 - 7469650
Alignment:
Q  158 cctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  7469687 cctcagattaatcgattcttagatcagataccgagttt 7469650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 10682876 - 10682840
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcg 171  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  10682876 caagtggacagtgggattggacccctcaaattagtcg 10682840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 45660654 - 45660614
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtc 170  Q
    |||| ||||||||||||||||||||  ||||||||||||||    
T  45660654 ccccacaagtggacggtgggattggatccctcaaattagtc 45660614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 49167181 - 49167249
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatacc 189  Q
    ||||||| |||||||||||||  |||||| ||||| ||||  ||||||||| ||| | |||||||||||    
T  49167181 aaacgggacccccgcaagtgggtggtggggttggttcccttgaattagtcggttcatggatcagatacc 49167249  T

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Target: scaffold0366 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 9366 - 9299
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  9366 cccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagttttc 9299  T

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Target: scaffold0366; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 12067 - 12000
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatc-agataccgagttttc 197  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||| ||||  ||||||||||||||    
T  12067 ccccacaagtggacggtgggattggtcccctcgaattagtcaattctt-gatcgggataccgagttttc 12000  T

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Target: scaffold0019 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 161939 - 162007
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  161939 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttc 162007  T

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Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 2639486 - 2639410
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  2639486 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2639410  T

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Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 4718771 - 4718847
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  4718771 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 4718847  T

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Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 20306034 - 20306110
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  20306034 aaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttc 20306110  T

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Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 21092667 - 21092743
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  21092667 aaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttc 21092743  T

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Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 42328130 - 42328206
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||| |||||||||| |||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  42328130 aaacggggcccccacaagtggacgatgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 42328206  T

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Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 21603356 - 21603431
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  21603356 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 21603431  T

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Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 20505689 - 20505754
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||||||||    
T  20505689 ccgcaagtgggcggtgggattggtcccctcaaattagccggttcttagatcagatgccgagttttc 20505754  T

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Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 8765601 - 8765525
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| | ||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  8765601 aaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8765525  T

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Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 19471740 - 19471812
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  19471740 gggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19471812  T

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Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 19542664 - 19542736
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  19542664 gggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19542736  T

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Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 19590032 - 19589960
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||| ||| |||| ||||||||||||||    
T  19590032 gggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19589960  T

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Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 34237730 - 34237654
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||  |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  34237730 aaacggggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34237654  T

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Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 7558018 - 7557952
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||  ||| ||||||||||||    
T  7558018 cccccgcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

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Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 2618320 - 2618388
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||| ||||||||||    
T  2618320 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggattccgagttttc 2618388  T

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Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 3734698 - 3734622
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||| ||| | |||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  3734698 aaacggggcccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3734622  T

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Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 28964159 - 28964234
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| || |||||||||||||||| ||||||||||||||||||||  |||| ||||||||    
T  28964159 aaacggggcccccgcaagtgggcg-tgggattggtcccctcgaattagtcgattcttagatcgaatactgagttttc 28964234  T

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Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 32879405 - 32879481
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||| ||||||| |||||||||||||||||||  |||||||||||||| |||  ||||||||||||||    
T  32879405 aaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggattggataccgagttttc 32879481  T

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Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 34610762 - 34610686
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||| ||||| ||||||||| |||| | |||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  34610762 aaacgagcccctcgcaagtgggcggtagaattggtcccctcgaattagtcgattcttggatcggataccgagttttc 34610686  T

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Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 39349382 - 39349458
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| ||||||||||| |||||||  |||||||||||||| |||| |||||| |||||||    
T  39349382 aaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccaagttttc 39349458  T

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Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 18128639 - 18128714
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| ||||||||||||||| |||| |||||||| ||||| ||||  ||||||||||||    
T  18128639 aaacggggcccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagtttt 18128714  T

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Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 42643193 - 42643118
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||  |||||||||||| |||||||||||||||||||  |||||| ||||||| |||| |||||||||||||    
T  42643193 aaacgggggccccgcaagtgggcggtgggattggtcccctcgcattagttgattcttggatcggataccgagtttt 42643118  T

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Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 2166831 - 2166897
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| || |||  |||||||||||||    
T  2166831 ccccgcaagtgggcggtgggattggtcccctcagattagtcgattttttgattggataccgagtttt 2166897  T

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Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 15259481 - 15259407
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||||| ||||||||||||| |||||  |||||||||||| ||||||||||||||| |||| ||| ||||||||    
T  15259481 aaacggggcccccgcaagtgggcggtgtaattggtcccctcgaattagtcgattcttggatcggatgccgagttt 15259407  T

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Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 28193600 - 28193674
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||||| ||||  ||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||    
T  28193600 aaacggggcccctacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 28193674  T

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Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 3403562 - 3403502
Alignment:
Q  136 aagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||| ||||| | ||||||||||| |||||||| ||||||||| |||||||||||||||    
T  3403562 aagtgggcggtgaggttggtcccctcgaattagtcaattcttagaccagataccgagtttt 3403502  T

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Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 4698790 - 4698722
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||  |||||||||||||||||||  |||||||||||| | |||  ||||||||||||||    
T  4698790 cccccgcaagtgagcggtgggattggtcccctcggattagtcgattcatggattggataccgagttttc 4698722  T

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Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 33747016 - 33747084
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||||||||| |||||| | |||  |||||||||| ||| |||| ||||||||||||||    
T  33747016 cccccgcaagtggacggtggaattggttctctcggattagtcgatccttggatcggataccgagttttc 33747084  T

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Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 10292180 - 10292255
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||| ||||||| |||||||||||||||| ||  |||||| ||||||| ||||  ||||||||||||    
T  10292180 aaacggggcccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagtttt 10292255  T

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Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 12312979 - 12313046
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||| ||||||| ||||||||||| ||||||| ||||||||| |||||||| | || ||||||||||    
T  12312979 cccccacaagtgggcggtgggattgatcccctcgaattagtcggttcttagagcggaaaccgagtttt 12313046  T

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Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 25248485 - 25248547
Alignment:
Q  133 cgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||| |||||||||||||||||||  ||||||||||| || |||| |||||||||||||    
T  25248485 cgcaagtgggcggtgggattggtcccctcggattagtcgatt-tttgatcggataccgagtttt 25248547  T

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Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 14633094 - 14633156
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||||||||   |||||||||||||| |||| |||||| |||||||    
T  14633094 caagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccaagttttc 14633156  T

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Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 43817816 - 43817754
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccga 191  Q
    ||||||||||||| |||||| ||||||| |||||||||| ||||||||| |||| ||| ||||    
T  43817816 cccccgcaagtgggcggtggaattggtctcctcaaattaatcgattcttggatcggatgccga 43817754  T

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Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 34694634 - 34694574
Alignment:
Q  137 agtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||||||||||||||| |||||||  | ||| |||| |||| |||||||||    
T  34694634 agtggacggtgggattggtcccctcagattagtctgtccttggatcggataacgagttttc 34694574  T

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Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 264467 - 264400
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||| ||| ||| ||||| ||||| ||||||| ||||||||||||||| |||| |||||||| ||||    
T  264467 cccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaatttt 264400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 651454 - 651521
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||| ||| ||| ||||| ||||| ||||||| ||||||||||||||| |||| |||||||| ||||    
T  651454 cccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaatttt 651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 837189 - 837256
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||| ||| ||| ||||| ||||| ||||||| ||||||||||||||| |||| |||||||| ||||    
T  837189 cccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaatttt 837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 6953074 - 6953008
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||| | ||||||||||||| |||||  |||||||||||||| ||||  ||||||||||||    
T  6953074 cccccgcaagttggcggtgggattggt-ccctcggattagtcgattcttggatcgaataccgagtttt 6953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 174
Target Start/End: Complemental strand, 7660952 - 7660917
Alignment:
Q  139 tggacggtgggattggtcccctcaaattagtcgatt 174  Q
    ||||||||| ||||||||||||||||||||||||||    
T  7660952 tggacggtgagattggtcccctcaaattagtcgatt 7660917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 8387523 - 8387460
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    |||||||||||||||||||||| || ||||  |||||| ||| |||||||| ||||| ||||||    
T  8387523 ccgcaagtggacggtgggattgatctcctcggattagttgatccttagatcggatactgagttt 8387460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 20470051 - 20470117
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||| |||||||||||||  ||||  ||||||||||| || |||| |||||||||||||    
T  20470051 cccccgcaagtgggcggtgggattggt-tcctcggattagtcgatttttggatcggataccgagtttt 20470117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 28088423 - 28088478
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagata 187  Q
    |||||||||| ||||||||||| |||||||| | |||||||||||| |||| ||||    
T  28088423 ccgcaagtgggcggtgggattgatcccctcagaatagtcgattcttggatcggata 28088478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 36848811 - 36848757
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatacc 189  Q
    ||||||| |||||||||| |||||||||||||||||| || || |||| ||||||    
T  36848811 caagtgggcggtgggattagtcccctcaaattagtcggtttttggatcggatacc 36848757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 24018508 - 24018585
Alignment:
Q  121 aaacgggcc-ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||| |||| ||||||| ||||| ||||||||||||  ||||||||| ||||| || | |||| |||||||||    
T  24018508 aaacgggcctccccacaagtgggcggtgagattggtccccttgaattagtcggttcttggaccggatatcgagttttc 24018585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 30089422 - 30089467
Alignment:
Q  128 ccccccgcaagtggacggtgggattggtcccctcaaattagtcgat 173  Q
    |||||| ||||||||||||| || ||| ||||||||||||||||||    
T  30089422 ccccccacaagtggacggtgagactggacccctcaaattagtcgat 30089467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 1219475 - 1219551
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| |||||  |||||| |||| |||| |||||| ||  |||||||||||||||||||  ||||||| |||||    
T  1219475 aaacggggcccccataagtgggcggtaggatcggtcccttcggattagtcgattcttagatcgaataccgaattttc 1219551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 13749186 - 13749250
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatacc 189  Q
    ||||||||||||||||| | |||| ||||||||||||  |||||||  | ||| |||||||||||    
T  13749186 gggccccccgcaagtgggcagtggaattggtcccctcggattagtcagtccttggatcagatacc 13749250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 8484736 - 8484660
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  8484736 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8484660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 27498806 - 27498730
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  27498806 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 27498730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 22693057 - 22693132
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  22693057 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 15641180 - 15641105
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  15641180 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 15641105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 18207337 - 18207405
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  18207337 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 18207405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 21236437 - 21236361
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||||||  ||| ||||||||||||||    
T  21236437 aaacggggcccccgcaagtgggcggtgggattagtcccctcagattagtcgattcttgaatcggataccgagttttc 21236361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 22392810 - 22392886
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||| ||||||||||||| ||||||||||| || |||| ||||||||||||||    
T  22392810 aaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttttc 22392886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 11926572 - 11926501
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||||||  ||||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  11926572 gggccccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 19456277 - 19456210
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  19456277 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 19456210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 34310264 - 34310339
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| |||||  |||||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||||||    
T  34310264 aaacgggacccccataagtggacggtgggattggtcccctcgaattaatcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 37495186 - 37495252
Alignment:
Q  131 cccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  37495186 cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 37495252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 41351168 - 41351103
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  41351168 ccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 41351103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 4603899 - 4603975
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| |||| ||||||||||||||||||||||||||||  |||||||| | ||| |||| ||||||||||||||    
T  4603899 aaacggggcccctgcaagtggacggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 4603975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 7085701 - 7085625
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||  |||||||||||| |||||||||||||||||||  ||||||||||||||  ||| ||||||||||||||    
T  7085701 aaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 7085625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 10399895 - 10399971
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtc-ccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||||||| ||||| ||| ||||||||    
T  10399895 aaacggggcccccgtaagtggacggtgggattggtcaccctcgaattagtcgattcttggatcaaatagcgagtttt 10399971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 30485958 - 30486026
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||  ||||||| |||||| |||| ||||||||||||||    
T  30485958 cccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttggatcggataccgagttttc 30486026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 31288021 - 31287945
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||| |||| ||||||||| ||||| || | ||||||||||||||    
T  31288021 aaacggggcccccgcaagtgggcggtgggattggtctcctcgaattagtcggttcttggaccggataccgagttttc 31287945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 32059515 - 32059439
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||| | ||| |||| ||||||||||||||    
T  32059515 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 32059439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 33709578 - 33709502
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||| ||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||| ||||||    
T  33709578 aaacgggacccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgtgttttc 33709502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 35425135 - 35425211
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| ||||||||||||||| |||  |||||||||||||| |||| |||||||| |||||    
T  35425135 aaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtcgattcttggatcggataccgaattttc 35425211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 38631046 - 38630978
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||  |||| ||||||||| |||| ||||||||||||||    
T  38631046 cccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagttttc 38630978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 9659382 - 9659311
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||||||||||||||||||||||| ||  |||||| ||||||| |||  |||||||||||||    
T  9659382 gggccccccgcaagtggacggtgggattggtcccttcggattagttgattcttggatgggataccgagtttt 9659311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 13038530 - 13038463
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatac 188  Q
    ||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||| |||||    
T  13038530 aaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13038463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 13108525 - 13108458
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatac 188  Q
    ||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||| |||| |||||    
T  13108525 aaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 36954944 - 36955007
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatac 188  Q
    ||||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||| |||||    
T  36954944 gggccccccgcaagtggactgtgggattagtcccctcatattagtcgattcttggatcggatac 36955007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 11464974 - 11464913
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccga 191  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  11464974 ccccgcaagtgggtggtgggattggtcccctcgaattagtcgattcttggatcggataccga 11464913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 38086413 - 38086361
Alignment:
Q  137 agtggacggtgggattggtcccctcaaattagtcgattcttagatcagatacc 189  Q
    |||||||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  38086413 agtggacggtgggattggtcccttcaaattagtcggttcttggatcagatacc 38086361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 38684337 - 38684405
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||  |||||||||||||||||||  |||||||||||||| |||| |||||||| |||||    
T  38684337 cccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgatttttc 38684405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 5049266 - 5049333
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||| ||||  ||||| ||||||    
T  5049266 cccccgcaaatggacggtgggattggtcccatcgaattagtcgattcttggatcgaataccaagtttt 5049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 13659320 - 13659245
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| ||||||||||| |||||||  |||| ||||||||| |||| |||||||| ||||    
T  13659320 aaacgggacccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggataccgaatttt 13659245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 19145479 - 19145412
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||| |||||||||||||||||||  |||||| | ||||| |||| |||||||||||||    
T  19145479 cccccgcaagtgggcggtgggattggtcccctcggattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 34049933 - 34050008
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| |||| ||||||||||||||  |||||| |||||| | ||| |||||||||||||    
T  34049933 aaacggggcccccgcaagtggtcggtaggattggtcccctcggattagttgattctcaaatcggataccgagtttt 34050008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 27487616 - 27487554
Alignment:
Q  134 gcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||| |||||||||||||||||||  |||||||||||||| |||| ||||| |||||||    
T  27487616 gcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacagagtttt 27487554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 10869629 - 10869564
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||| |||||||||||||||||||  |||||||| ||||| |||| |||||| |||||||    
T  10869629 ccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccaagttttc 10869564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 12317226 - 12317154
Alignment:
Q  124 cgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||||  |||||||||| |||| ||  ||||||| ||||||||||| ||||||||||||||    
T  12317226 cgggccccccgcaagtgggtggtgggattgatccc-tcggattagtcaattcttagatcggataccgagttttc 12317154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 28614543 - 28614486
Alignment:
Q  139 tggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||| ||||||| |||||||||||| || |||| |||||||||||||    
T  28614543 tggacggtgggattgatcccctcgaattagtcgatttttggatcggataccgagtttt 28614486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 5067392 - 5067444
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatc 182  Q
    |||||||||||| |||||||||||||||||||  |||||||||||||| ||||    
T  5067392 ccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatc 5067444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 10631340 - 10631288
Alignment:
Q  145 gtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  10631340 gtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10631288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 12398515 - 12398447
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||| ||||||||| ||||| ||| ||||||||||||| ||||| |||  ||||||||||||||    
T  12398515 cccccgcaaatggacggtgagattgatcctctcaaattagtcggttcttggattggataccgagttttc 12398447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 6014343 - 6014280
Alignment:
Q  133 cgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||| ||||| |||| |||||||| ||||||||||||||| |||| |||| ||||||||    
T  6014343 cgcaagtgggcggtgagattagtcccctcgaattagtcgattcttggatcggatatcgagtttt 6014280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 23270589 - 23270522
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||| |||||||||||||||||||||||  |||||| ||||||| |||  |||||| ||||||    
T  23270589 cccccgcaaatggacggtgggattggtcccctcggattagttgattcttggattggataccaagtttt 23270522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 8821120 - 8821182
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||  ||||||||||||| | || |||||||| |||||| |||||||||||||||||||    
T  8821120 caagtgggtggtgggattggtcacttcgaattagtctattcttggatcagataccgagttttc 8821182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 21042640 - 21042574
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||||  |||||||||||||||||||||  |||||  |||| ||||| ||||||    
T  21042640 ccccgcaagtggacggtgaaattggtcccctcaaattagtcagttcttgaatcaaataccaagtttt 21042574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 25750674 - 25750613
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||  |||| |||||||||| ||| |||||||||||||| |||| |||||||||||||    
T  25750674 caagtggggggtgagattggtcccttcagattagtcgattcttggatcggataccgagtttt 25750613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 42193614 - 42193671
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagata 187  Q
    |||||||||||| ||||||| ||||||| |||  |||||||||||||| |||||||||    
T  42193614 ccccgcaagtgggcggtggggttggtcctctcggattagtcgattcttggatcagata 42193671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 36895558 - 36895622
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||| ||| ||||||| || |||| ||||||||| ||||| |||| |||||||||||||    
T  36895558 ccgcaagtgggcggggggattgttctcctcgaattagtcggttcttggatcggataccgagtttt 36895622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 3639901 - 3639948
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattctt 177  Q
    |||||||||||||| ||| ||||| |||||||| ||||||||||||||    
T  3639901 ccccgcaagtggacagtgagattgatcccctcagattagtcgattctt 3639948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 41568935 - 41568868
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||| |||  ||||||||||||||||| | |||||| |||| || ||||||||| |||||||||    
T  41568935 ccccgcaaatgggtggtgggattggtcccctaagattagttgattattcgatcagatatcgagttttc 41568868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 7151454 - 7151500
Alignment:
Q  150 attggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||  ||||||||||||||| |||| |||||||||||||    
T  7151454 attggtcccctagaattagtcgattcttggatcggataccgagtttt 7151500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 8780594 - 8780652
Alignment:
Q  131 cccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatacc 189  Q
    ||||||||||||||||| ||||| |||| |||||||||||  | |||||||| ||||||    
T  8780594 cccgcaagtggacggtgagattgatcccatcaaattagtcagtccttagatcggatacc 8780652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 25548587 - 25548533
Alignment:
Q  143 cggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||  ||| ||||||||||||||| ||||  |||||||||||||    
T  25548587 cggtgggattggtcatctcgaattagtcgattcttggatcgaataccgagttttc 25548533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 10837440 - 10837493
Alignment:
Q  143 cggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||| |||||||||||||| |||||| | | |||||||| |||||||||||||    
T  10837440 cggtgagattggtcccctcagattagttggtccttagatcggataccgagtttt 10837493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 22648154 - 22648218
Alignment:
Q  131 cccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    |||||||||| | |||||||||| |||||||| |||||||| |  || |||| ||||||||||||    
T  22648154 cccgcaagtgaatggtgggattgatcccctcagattagtcggtctttggatcggataccgagttt 22648218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 1123 - 1057
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  1123 cccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagtttt 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 13122 - 13047
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||||| ||||||| |||| |||||||||||||    
T  13122 aaacggggcccccgcaagtggacggtgggattgatcccctcagattagttgattcttggatcggataccgagtttt 13047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 1379027 - 1379090
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgag 192  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||    
T  1379027 cccccgcaagtggacggtgagattggtcccctcagattagtcgattcttagatcggataccgag 1379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 34778461 - 34778535
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||||| ||||||||||||||||||||||||||||||||   |||||||||||||| |||| ||||||||||||    
T  34778461 aaacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 4621312 - 4621236
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||  |||||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  4621312 aaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 4621236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 15059477 - 15059401
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||  |||||||||||| ||||| ||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  15059477 aaacggggtccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagttttc 15059401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 23041655 - 23041719
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  23041655 ccgcaagtggacagtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 23041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 24122145 - 24122220
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| | ||||||||||| |||||||||||||||||||  |||||||||||||| |||| |||||||||||||    
T  24122145 aaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 24674515 - 24674590
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| |||||||| ||||    
T  24674515 aaacggggcccccgcaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgaatttt 24674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 36155955 - 36155888
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||||| |||| |||||||||||||    
T  36155955 cccccgcaggtgggcggtgggattggtcccttcaaattagtcgattcttggatcggataccgagtttt 36155888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 7766802 - 7766726
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| |||||||||||||||||||  ||||||||||||||  ||| |||| |||||||||    
T  7766802 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagttttc 7766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 8254827 - 8254751
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| ||||||||||| ||||||  |||||||||||||||  ||| ||||||||||||||    
T  8254827 aaacggggcccccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaatcggataccgagttttc 8254751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 27159215 - 27159283
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  || |||| |||| |||||||||    
T  27159215 cccccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagttttc 27159283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 33905585 - 33905509
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| || ||| |||||||||||||||||| ||||||||||||  ||||||||| |||| ||||||||||||||    
T  33905585 aaacggggcctccgtaagtggacggtgggattgatcccctcaaatttatcgattctttgatcggataccgagttttc 33905509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 18533799 - 18533724
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| |||| |||||||| | |||||||||||||||||| |||| |||||||||||||| |||||| ||||||    
T  18533799 aaacggggcccctgcaagtgggccgtgggattggtcccctcatattaatcgattcttagatcggataccaagtttt 18533724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 17935891 - 17935965
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||||| ||||||||||||| || |||||||||||| |||  |||||||||||||| |||| ||||||||||||    
T  17935891 aaacggggcccccgcaagtgggcgatgggattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 52135261 - 52135323
Alignment:
Q  134 gcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| |||| ||||| |||||||    
T  52135261 gcaagtggacggtgggattggtcccctcatattagtcggttcttggatcggatactgagtttt 52135323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 27454932 - 27454863
Alignment:
Q  128 ccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||| |||| |||||||||||||||||||  |||||||||||||| |||| |||||| |||||||    
T  27454932 ccccccgcatgtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacctagttttc 27454863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 1486549 - 1486617
Alignment:
Q  128 ccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||||||||||||| |||||||||  |||||||| | ||| |||| |||||||||||||    
T  1486549 ccccccgcaagtggacggtgggatcggtcccctccgattagtcggtccttggatcggataccgagtttt 1486617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 22910001 - 22910069
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||| ||||||||  |||||||||| ||| |||| ||||||||||||||    
T  22910001 cccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagttttc 22910069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 23734243 - 23734315
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||| |||||  ||||||||||||| ||||||||||||||  ||| |||||| |||||||    
T  23734243 gggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttc 23734315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 23741435 - 23741507
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||||||| |||||  ||||||||||||| ||||||||||||||  ||| |||||| |||||||    
T  23741435 gggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttc 23741507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 30677306 - 30677374
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||||| || | |||| |||||||||    
T  30677306 cccccgcaagtgggcggtgggattggtcccctcagattagtcggttcttggaccggatatcgagttttc 30677374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 8779811 - 8779744
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatac 188  Q
    ||||||| ||||| ||||| | |||||||||||||||||||  ||||||||||||||||||| |||||    
T  8779811 aaacggggcccccacaagtaggcggtgggattggtcccctcggattagtcgattcttagatcggatac 8779744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 36921579 - 36921513
Alignment:
Q  128 ccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| ||  ||| ||||||||||||    
T  36921579 ccccccgcaagtggacggtgggattagt-ccctcaaattagtcgattattgaatcggataccgagttt 36921513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 45331692 - 45331621
Alignment:
Q  125 gggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||| |||||||||||||||||||||||  |||||||| |||| |||||||||  ||| |||||||||||||    
T  45331692 gggctccccgcaagtggacggtgggattaatcccctcagattaatcgattcttgaatcggataccgagtttt 45331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 12877011 - 12876971
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctc 161  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  12877011 aaacggggcccccgcaagtggacggtgggattggtcccctc 12876971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 48699889 - 48699957
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| ||||||||||| |||| ||  |||||||||||||| |||| |||| |||||||||    
T  48699889 cccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagttttc 48699957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 7197314 - 7197247
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||| |||||||| ||||| |||||||||||||  |||||||||||| | |||| |||||||||||||    
T  7197314 cccctgcaagtgggcggtgagattggtcccctcggattagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 26513215 - 26513148
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||| ||||||| |||||||| ||||||||||  |||||||||||||| ||||  ||||||||||||    
T  26513215 cccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagtttt 26513148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 32930871 - 32930941
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccga 191  Q
    |||||||  ||| ||||||||| |||||||||| |||||||| |||| |||||||||||||  ||||||||    
T  32930871 aaacggggtccctgcaagtggatggtgggattgatcccctcagattaatcgattcttagattggataccga 32930941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 37351520 - 37351454
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||| ||||||| |||||||||||||||||||  |||||||| | ||| |||| ||||||||||||    
T  37351520 cccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 2537815 - 2537864
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtc 170  Q
    ||||||||||||||||||||| ||| |||||||||||||||  |||||||    
T  2537815 aaacgggccccccgcaagtgggcggagggattggtcccctcggattagtc 2537864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 46607939 - 46608008
Alignment:
Q  128 ccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||| ||||||||||| |||||||  |||||||| | ||| |||| |||| |||||||||    
T  46607939 ccccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggatatcgagttttc 46608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 7578531 - 7578607
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||| |||||||||  |||||||||||| |||||  |||||| |||| || |||| ||||||||||||||    
T  7578531 aaacggggccctcgcaagtgggtggtgggattggttccctcggattagttgatttttggatcggataccgagttttc 7578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 16539752 - 16539804
Alignment:
Q  144 ggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||||||||||||||||||||||||| |||  ||| |||||||| ||||    
T  16539752 ggtgggattggtcccctcaaattagtcgatacttgtatcggataccgaatttt 16539804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 14603947 - 14603994
Alignment:
Q  150 attggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  14603947 attggtcccctcggattagtcgattcttggatcggataccgagttttc 14603994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 35138118 - 35138185
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||| ||||||||||| | |||||  |||||||| | ||| |||| |||||||||||||    
T  35138118 cccccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagtttt 35138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 50202668 - 50202742
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||| ||||||||| |||||| ||||||||||||  |||| ||||||||| |||| |||| ||||||||    
T  50202668 aaacgggaccctcgcaagtgggcggtggaattggtcccctcggattaatcgattctt-gatcggatatcgagtttt 50202742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 5315478 - 5315528
Alignment:
Q  146 tgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||  || ||||||||||| |||| |||||||||||||    
T  5315478 tgggattggtcccctcggataagtcgattcttggatcggataccgagtttt 5315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 8077777 - 8077841
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtt 194  Q
    ||||||||||||| |||||||||||||||||||  |||| |||||| || |||| || ||||||||    
T  8077777 cccccgcaagtgggcggtgggattggtcccctc-gattaatcgattattggatcggagaccgagtt 8077841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 14928561 - 14928508
Alignment:
Q  128 ccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagat 181  Q
    ||||||||||||||||  |||||||||| ||||||||||| ||| | |||||||    
T  14928561 ccccccgcaagtggacaatgggattggttccctcaaattaatcggtccttagat 14928508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 16899626 - 16899675
Alignment:
Q  122 aacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcg 171  Q
    |||||| |||| |||||||||||||| |||||||||||||  ||||||||    
T  16899626 aacggggcccctgcaagtggacggtgagattggtcccctcggattagtcg 16899675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 29057412 - 29057363
Alignment:
Q  122 aacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcg 171  Q
    |||||| ||||||||| ||| || || |||||||||||||||||||||||    
T  29057412 aacgggacccccgcaaatgggcgatgtgattggtcccctcaaattagtcg 29057363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 168323 - 168399
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| | ||||| ||||| |||||||||||||||||||  ||||||   |||||||| | |||||| |||||||    
T  168323 aaacgggactcccgctagtggccggtgggattggtcccctcggattagttagttcttagaccggataccaagttttc 168399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 2054633 - 2054693
Alignment:
Q  135 caagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    |||||||||||||  ||| | || |||||||||||| |||||||  |||||||||||||||    
T  2054633 caagtggacggtgcaatttgacctctcaaattagtctattcttaagtcagataccgagttt 2054693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 25237053 - 25236997
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagatac 188  Q
    ||||||||||||||||| |||||||| |||| |||||||| | ||| |||| |||||    
T  25237053 ccgcaagtggacggtggaattggtcctctcatattagtcggtcctttgatcggatac 25236997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 5157 - 5081
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||| ||| |||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  5157 aaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 5081  T

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Target: scaffold0217 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 7384 - 7309
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||| |||| |||||| ||||||    
T  7384 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagtttt 7309  T

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Target: scaffold0070 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 40447 - 40522
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| ||||||||||||| ||||||||||||| |||||  |||||||||||||| |||| ||||||||||||||    
T  40447 aaacggggcccccgcaagtgggcggtgggattggt-ccctcggattagtcgattcttggatcggataccgagttttc 40522  T

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Target: scaffold0459 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 10760 - 10694
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||| |||| ||||||||||||||    
T  10760 ccccacaagtggacggtgggattggtcccctcgaattagtcaattctt-gatcggataccgagttttc 10694  T

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Target: scaffold0049 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 66876 - 66951
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||| | ||| |||| |||||||||||||    
T  66876 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 66951  T

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Target: scaffold0199 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 8513 - 8451
Alignment:
Q  134 gcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||||| ||||||||||||||| |||  ||||||||||||||||||| |||||||||||||    
T  8513 gcaagtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttt 8451  T

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Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 32418 - 32485
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  32418 cccccgcaagtgggtggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 32485  T

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Target: scaffold0051 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 52946 - 52870
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| |||||||| |||| |||| |||||||||| |||  ||||||||||||||  ||| ||||||||||||||    
T  52946 aaacggggcccccgcaggtgggcggtaggattggtcctctcggattagtcgattcttgaatcggataccgagttttc 52870  T

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Target: scaffold1175 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 2501 - 2426
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| |||||||||||||||||||  |||||||  | |||  ||| |||||||||||||    
T  2501 aaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccgagtttt 2426  T

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Target: scaffold0160 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 29210 - 29143
Alignment:
Q  129 cccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||| ||||| |||||||||||||||||| |||||||  | ||| |||| |||||||||||||    
T  29210 cccccgcaaatggacagtgggattggtcccctcagattagtcagtccttggatcggataccgagtttt 29143  T

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Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 97441 - 97366
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||| ||||||||||||| ||||||||||||||| |||  |||||||| || || || | |||||||||||||    
T  97441 aaacgggacccccgcaagtgggcggtgggattggtcctctcgtattagtcggtttttggaccggataccgagtttt 97366  T

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Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 5964 - 6028
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    ||||||||||||||||||||||||| ||||| |||||||| | ||| ||| ||||| ||| ||||    
T  5964 ccgcaagtggacggtgggattggtcacctcagattagtcggtccttggattagatatcgaatttt 6028  T

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Target: scaffold1712 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 681 - 607
Alignment:
Q  122 aacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagtttt 196  Q
    |||||| ||||||||||||| ||| ||||||||| || |||||||||||| | | | |||||||||| |||||||    
T  681 aacgggacccccgcaagtgggcggagggattggttccatcaaattagtcggtccgtcgatcagatactgagtttt 607  T

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Target: scaffold0068 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 41719 - 41644
Alignment:
Q  121 aaacgggccccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||| |||| |||||||| |  ||||||||||||||||  |||||||||||||| |||| ||||| ||||||||    
T  41719 aaacggggcccctgcaagtgggcaatgggattggtcccctcggattagtcgattctt-gatcggatacagagttttc 41644  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 11486 - 11419
Alignment:
Q  130 ccccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttttc 197  Q
    ||||||||||||| | |||||||| ||||||||||||||| | | ||| |||| |||||| |||||||    
T  11486 ccccgcaagtggaagatgggattgatcccctcaaattagttggtccttggatcggataccaagttttc 11419  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 27903 - 27966
Alignment:
Q  132 ccgcaagtggacggtgggattggtcccctcaaattagtcgattcttagatcagataccgagttt 195  Q
    ||||||||||  |||| |||| ||||||||  |||||||| ||||| |||||||||||||||||    
T  27903 ccgcaagtgggtggtgagatttgtcccctcggattagtcggttcttggatcagataccgagttt 27966  T

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