View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18753_low_2 (Length: 732)

Name: NF18753_low_2
Description: NF18753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18753_low_2
NF18753_low_2
[»] chr7 (15 HSPs)
chr7 (13-716)||(38038166-38038878)
chr7 (578-696)||(29390462-29390578)
chr7 (583-696)||(29378709-29378820)
chr7 (615-696)||(32358703-32358784)
chr7 (615-696)||(33204928-33205009)
chr7 (583-685)||(14691221-14691321)
chr7 (608-698)||(30181637-30181726)
chr7 (615-685)||(34923027-34923097)
chr7 (601-696)||(38372638-38372733)
chr7 (619-673)||(1401171-1401225)
chr7 (583-696)||(32917503-32917614)
chr7 (642-707)||(43635174-43635240)
chr7 (644-685)||(5947701-5947742)
chr7 (624-673)||(26331868-26331917)
chr7 (612-673)||(49104302-49104363)
[»] chr5 (29 HSPs)
chr5 (608-696)||(35083326-35083414)
chr5 (624-698)||(29136733-29136809)
chr5 (615-696)||(40452388-40452469)
chr5 (615-708)||(41125768-41125861)
chr5 (583-693)||(589216-589325)
chr5 (615-682)||(24030308-24030375)
chr5 (615-685)||(41059711-41059781)
chr5 (615-696)||(6125380-6125461)
chr5 (583-681)||(28625544-28625640)
chr5 (649-696)||(42095337-42095384)
chr5 (615-696)||(10537137-10537219)
chr5 (643-685)||(19840150-19840192)
chr5 (615-685)||(29922111-29922181)
chr5 (642-696)||(35536965-35537019)
chr5 (629-696)||(2878587-2878655)
chr5 (642-698)||(11706820-11706876)
chr5 (632-696)||(12467379-12467443)
chr5 (624-696)||(13739332-13739404)
chr5 (624-696)||(17868115-17868187)
chr5 (624-696)||(40697109-40697181)
chr5 (591-685)||(1943067-1943159)
chr5 (590-668)||(5559858-5559934)
chr5 (615-685)||(2577350-2577420)
chr5 (644-698)||(2670182-2670236)
chr5 (615-685)||(3977567-3977637)
chr5 (643-685)||(22201853-22201895)
chr5 (615-696)||(27806009-27806091)
chr5 (643-692)||(589122-589170)
chr5 (624-681)||(15364104-15364161)
[»] chr6 (18 HSPs)
chr6 (629-696)||(21025130-21025197)
chr6 (616-696)||(35071339-35071419)
chr6 (601-696)||(10755194-10755289)
chr6 (629-696)||(12816812-12816879)
chr6 (643-696)||(21871195-21871248)
chr6 (642-685)||(6805847-6805890)
chr6 (615-685)||(9201643-9201713)
chr6 (583-696)||(9202310-9202421)
chr6 (624-696)||(9764302-9764374)
chr6 (583-685)||(10687374-10687473)
chr6 (583-681)||(29623404-29623499)
chr6 (583-673)||(32675823-32675911)
chr6 (617-667)||(3210929-3210979)
chr6 (603-673)||(6752894-6752964)
chr6 (615-673)||(23239341-23239399)
chr6 (583-695)||(2027089-2027198)
chr6 (615-696)||(6958718-6958798)
chr6 (608-669)||(12817046-12817107)
[»] chr2 (14 HSPs)
chr2 (583-696)||(7480810-7480921)
chr2 (615-696)||(8832551-8832632)
chr2 (621-698)||(37420006-37420083)
chr2 (583-685)||(4026989-4027089)
chr2 (648-698)||(43787741-43787791)
chr2 (583-696)||(36501426-36501537)
chr2 (615-685)||(38216113-38216183)
chr2 (643-696)||(17797332-17797385)
chr2 (624-696)||(29080749-29080822)
chr2 (615-696)||(29774839-29774920)
chr2 (583-673)||(21788521-21788609)
chr2 (644-691)||(39070964-39071011)
chr2 (642-696)||(4533443-4533497)
chr2 (629-698)||(33321221-33321290)
[»] chr8 (12 HSPs)
chr8 (619-696)||(28879153-28879230)
chr8 (584-692)||(32131505-32131611)
chr8 (603-696)||(32212926-32213019)
chr8 (583-696)||(10213759-10213870)
chr8 (583-696)||(34286475-34286586)
chr8 (631-696)||(13131553-13131618)
chr8 (624-696)||(24087274-24087346)
chr8 (578-673)||(25465781-25465874)
chr8 (588-673)||(25333635-25333718)
chr8 (616-682)||(32975782-32975848)
chr8 (619-696)||(24350430-24350507)
chr8 (608-673)||(41145330-41145395)
[»] chr4 (32 HSPs)
chr4 (583-695)||(36254948-36255058)
chr4 (615-696)||(488295-488376)
chr4 (603-696)||(36740986-36741079)
chr4 (615-696)||(48721914-48721995)
chr4 (625-685)||(35405787-35405847)
chr4 (583-698)||(48591333-48591446)
chr4 (615-673)||(34526271-34526329)
chr4 (643-696)||(28074486-28074539)
chr4 (643-696)||(39932685-39932738)
chr4 (624-696)||(3564309-3564381)
chr4 (578-668)||(11256600-11256688)
chr4 (609-696)||(12495555-12495642)
chr4 (617-696)||(28663668-28663747)
chr4 (643-694)||(30956806-30956857)
chr4 (615-685)||(897064-897134)
chr4 (583-696)||(23335706-23335817)
chr4 (583-696)||(38345734-38345844)
chr4 (644-682)||(43415213-43415251)
chr4 (603-668)||(9153521-9153586)
chr4 (619-696)||(48667768-48667845)
chr4 (583-682)||(22273844-22273941)
chr4 (618-686)||(23297532-23297600)
chr4 (583-673)||(18630829-18630917)
chr4 (615-682)||(29877733-29877800)
chr4 (583-673)||(41228967-41229055)
chr4 (583-684)||(42611791-42611890)
chr4 (643-698)||(52274049-52274104)
chr4 (591-696)||(17222901-17223004)
chr4 (583-655)||(34633455-34633524)
chr4 (610-696)||(41071439-41071525)
chr4 (643-696)||(7673421-7673474)
chr4 (603-696)||(48687016-48687108)
[»] chr1 (24 HSPs)
chr1 (584-696)||(28690069-28690179)
chr1 (615-696)||(48819393-48819474)
chr1 (583-696)||(4068179-4068290)
chr1 (583-696)||(37712131-37712242)
chr1 (624-696)||(26988251-26988323)
chr1 (616-696)||(47413467-47413547)
chr1 (583-696)||(37329323-37329434)
chr1 (645-698)||(26435084-26435137)
chr1 (615-696)||(46500911-46500992)
chr1 (583-660)||(16888913-16888988)
chr1 (603-696)||(35897530-35897623)
chr1 (629-698)||(41196619-41196688)
chr1 (617-673)||(19220269-19220325)
chr1 (615-695)||(49738213-49738293)
chr1 (629-696)||(10365278-10365345)
chr1 (583-673)||(13039011-13039099)
chr1 (622-685)||(42367051-42367114)
chr1 (583-673)||(46689484-46689572)
chr1 (618-673)||(52363806-52363861)
chr1 (615-673)||(9572718-9572776)
chr1 (618-696)||(9575425-9575503)
chr1 (642-696)||(37712036-37712090)
chr1 (615-696)||(28870297-28870378)
chr1 (615-664)||(41003481-41003530)
[»] chr3 (14 HSPs)
chr3 (583-696)||(20685849-20685960)
chr3 (583-696)||(52895316-52895427)
chr3 (583-696)||(40240489-40240599)
chr3 (583-698)||(48597775-48597889)
chr3 (618-685)||(31787619-31787686)
chr3 (618-685)||(46573376-46573443)
chr3 (619-685)||(35127312-35127377)
chr3 (583-696)||(43079845-43079956)
chr3 (643-696)||(29002836-29002889)
chr3 (615-699)||(53261675-53261760)
chr3 (621-685)||(32983213-32983277)
chr3 (601-685)||(40580998-40581082)
chr3 (643-691)||(47520430-47520478)
chr3 (643-696)||(17383473-17383526)
[»] scaffold0015 (1 HSPs)
scaffold0015 (624-692)||(48543-48611)
[»] scaffold0157 (1 HSPs)
scaffold0157 (609-696)||(24835-24922)
[»] scaffold0048 (1 HSPs)
scaffold0048 (631-696)||(58779-58844)
[»] scaffold0100 (1 HSPs)
scaffold0100 (643-685)||(38517-38559)
[»] scaffold0004 (1 HSPs)
scaffold0004 (643-685)||(242704-242746)


Alignment Details
Target: chr7 (Bit Score: 585; Significance: 0; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 585; E-Value: 0
Query Start/End: Original strand, 13 - 716
Target Start/End: Complemental strand, 38038878 - 38038166
Alignment:
Q  13 aaaattaagaacaatgttcaagattttaaaatatgnnnnnnnn-tatcatacctgttgacatctttttccacaaaaagattcacgattgaactcatcact 111  Q
    |||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38038878 aaaattaagaacaatgttcaagattttaaaatatgaaaaaaaaatatcatacctgttgacatctttttccacaaaaagattcacgattgaactcatcact 38038779  T
Q  112 gttggcctcaacacagtttatatgatctacatgagagatataaagtttagtttattaatctttcaactatagagcacacatgatgctaagtttgatgtta 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38038778 gttggcctcaacacagtttatatgatctacatgagagatataaagtttagtttatttatctttcaactatagagcacacatgatgctaagtttgatgtta 38038679  T
Q  212 acacattatttatcaaaaaagatttgtttctttttgatggggaaagaaaatacattattgagaaaagaatattgagttaattaatgaagaggagatatat 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38038678 acacattatttatcaaaaaagatttgtttctttttgatggggaaagaaaatacattattgagaaaagaatattgagttaattaatgaagaggagatatat 38038579  T
Q  312 aattagtataagaaaaagaagaagagaaaatacatctggttctgcatgaaggacatgcacgaaagacacatccagcagcgggattttcacttccttcttg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  38038578 aattagtataagaaaaagaagaagagaaaatacatctggttctgcatgaaggacatgcacgaaagacacatccagtagcgggattttcacttccttgttg 38038479  T
Q  412 ataggatccacaaaatttacaagagcagcgaatgcagtgccagtcacctgctggaagctcctgcaagg-nnnnnnntgaagaagacgatgatttatcata 510  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||        |||| |||||||||||||||||||    
T  38038478 ataggatccacaaaatttacaagagcagtgaatgcagtgccagtcacctgctggaagctcctgcaaggaaaaaaaatgaaaaagacgatgatttatcata 38038379  T
Q  511 tcaataaaagaatgatctctaaa---atgataagatcaaaggcttgtttgtattg----atttattttttatcctatgcaaaacaacttatgaagataaa 603  Q
    |||||||||||||||||||||||   ||||||||||||||| |||||||||||||    |||||||||||||||||||||||||||||||||||||||||    
T  38038378 tcaataaaagaatgatctctaaaatgatgataagatcaaagccttgtttgtattgatttatttattttttatcctatgcaaaacaacttatgaagataaa 38038279  T
Q  604 caagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaatgacccc 703  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38038278 caagtttcatgagtgagaaattatgaattaacgtaatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaatggcccc 38038179  T
Q  704 aaataatgaaaat 716  Q
    |||||||||||||    
T  38038178 aaataatgaaaat 38038166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 578 - 696
Target Start/End: Complemental strand, 29390578 - 29390462
Alignment:
Q  578 tatgcaaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaacta 677  Q
    |||| |||||||||||||||||||  ||| |||| | ||  |||| |||| |||||||||||  ||||||||||||||||||||||||||| |||| ||     
T  29390578 tatgaaaaacaacttatgaagata--caattttcgttagctagaatttatgaattaacataaaagcttatttatttgcataaactatttttcataagctc 29390481  T
Q  678 aaaaataaatcaatccaaa 696  Q
    |||||||| ||||||||||    
T  29390480 aaaaataagtcaatccaaa 29390462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 583 - 696
Target Start/End: Original strand, 29378709 - 29378820
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||| ||||||||||||  ||| |||| | ||| |||| |||| ||||||| |||  |||||||||||||||||| |||||||| ||||||| |||||    
T  29378709 aaaacagcttatgaagata--caattttcgttagtaagaacttatgaattaacgtaaaagcttatttatttgcataagctatttttcataaactcaaaaa 29378806  T
Q  683 taaatcaatccaaa 696  Q
    ||| ||||||||||    
T  29378807 taagtcaatccaaa 29378820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 615 - 696
Target Start/End: Original strand, 32358703 - 32358784
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||| |||| |||||||||||  ||||||||| ||||||||| |||||||| ||| ||||||||||  ||||||||||    
T  32358703 agtgagaacttataaattaacataaaagcttatttacttgcataaattattttttgtaagctaaaaaatatgtcaatccaaa 32358784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 615 - 696
Target Start/End: Original strand, 33204928 - 33205009
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||  ||||||| |||| |||||||||||  |||||||||    
T  33204928 agtgagaacttatgaattaacataaaagcttatttatttgcataagatatttttcataagctaaaaaataagccaatccaaa 33205009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 583 - 685
Target Start/End: Complemental strand, 14691321 - 14691221
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    ||||||| ||||||||||| |  | |||| | |||||||| |||| |||||||||||  | |||||||||||||| |||||||||| |||| ||||||||    
T  14691321 aaaacaatttatgaagatata--attttcgttagtgagaacttatgaattaacataaaaggttatttatttgcatgaactatttttcataagctaaaaaa 14691224  T
Q  683 taa 685  Q
    |||    
T  14691223 taa 14691221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 608 - 698
Target Start/End: Original strand, 30181637 - 30181726
Alignment:
Q  608 tttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaatg 698  Q
    |||||| |||| ||| |||| |||||||||||  |||||||||||||||||||||| || |||||| |||||||||||  |||| ||||||    
T  30181637 tttcattagtgggaacttatgaattaacataaaagcttatttatttgcataaacta-ttattataagctaaaaaataaggcaatacaaatg 30181726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 615 - 685
Target Start/End: Original strand, 34923027 - 34923097
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||||| |||| || ||||||||  |||||||||||||||||| ||||||||||||| || ||||||||    
T  34923027 agtgagaacttatgaactaacataaaagcttatttatttgcataagctattttttataagctcaaaaataa 34923097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 601 - 696
Target Start/End: Original strand, 38372638 - 38372733
Alignment:
Q  601 aaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||| |||| | |||||||| |||| |||||||||||  ||| |||||||||||| | |||||||| |||| || ||||||||  |||||||||    
T  38372638 aaacaattttcgttagtgagaacttatgaattaacataaaagctgatttatttgcattagctatttttcataagctcaaaaataacccaatccaaa 38372733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 673
Target Start/End: Original strand, 1401171 - 1401225
Alignment:
Q  619 agaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    |||| |||| |||||||||||  |||||||||||||||| |||||||||| ||||    
T  1401171 agaacttatgaattaacataaaagcttatttatttgcatgaactatttttcataa 1401225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 583 - 696
Target Start/End: Complemental strand, 32917614 - 32917503
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    ||||||||||||||||||| |  | |||  | |||||||| |||| | ||||| |||  || |||||||| |||||| ||||||||||||| || |||||    
T  32917614 aaaacaacttatgaagatata--atttttgttagtgagaacttataatttaacttaaaagcatatttattggcataacctattttttataagctcaaaaa 32917517  T
Q  683 taaatcaatccaaa 696  Q
    |||||  |||||||    
T  32917516 taaattcatccaaa 32917503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 642 - 707
Target Start/End: Complemental strand, 43635240 - 43635174
Alignment:
Q  642 gcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaatg-accccaaat 707  Q
    ||||||||||||| |||||||||||||  ||| || |||||||  |||||||||||| |||||||||    
T  43635240 gcttatttatttggataaactatttttcttaagctcaaaaatatgtcaatccaaatgaaccccaaat 43635174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 685
Target Start/End: Original strand, 5947701 - 5947742
Alignment:
Q  644 ttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||||||||||||| |||||||||||||||| || |||||    
T  5947701 ttatttatttgcataagctattttttataaactcaacaataa 5947742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 673
Target Start/End: Original strand, 26331868 - 26331917
Alignment:
Q  624 ttattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    |||| |||||||||||  |||||||||||||||||| |||||||| ||||    
T  26331868 ttatgaattaacataaaagcttatttatttgcataagctatttttcataa 26331917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 673
Target Start/End: Complemental strand, 49104363 - 49104302
Alignment:
Q  612 atgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    ||||||||||| |||| |||||||||||    |||||||||||||||| ||||||| |||||    
T  49104363 atgagtgagaatttatgaattaacataaaaatttatttatttgcataatctattttatataa 49104302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 5e-21; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 608 - 696
Target Start/End: Original strand, 35083326 - 35083414
Alignment:
Q  608 tttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||| |||||||| |||| |||||||||||  ||||||||||||||||||||||||| | ||||||| ||||||||| |||||||||    
T  35083326 tttcatcagtgagaacttatgaattaacataaaagcttatttatttgcataaactatttatcataaactcaaaaataaaccaatccaaa 35083414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 624 - 698
Target Start/End: Complemental strand, 29136809 - 29136733
Alignment:
Q  624 ttattaattaacataatcgcttatttatttgcataaactatt--ttttataaactaaaaaataaatcaatccaaatg 698  Q
    |||| |||||||||||  ||||||||||||||||||||||||  |||||||| || |||||||| ||||||||||||    
T  29136809 ttatgaattaacataaaagcttatttatttgcataaactattttttttataagctgaaaaataagtcaatccaaatg 29136733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 615 - 696
Target Start/End: Complemental strand, 40452469 - 40452388
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||| |||| ||| |||||||| |||||||||||||||||| |||||||| |||| || ||||||||  |||||||||    
T  40452469 agtgagaacttatgaataaacataatagcttatttatttgcataagctatttttcataagctcaaaaataagccaatccaaa 40452388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 615 - 708
Target Start/End: Original strand, 41125768 - 41125861
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaatgaccccaaata 708  Q
    |||||||| |||| |||||||||||  |||||| |||||||| || |||||||| ||||||| ||||||||  ||||||||| | |||||||||    
T  41125768 agtgagaacttatgaattaacataaaagcttatatatttgcaaaagctatttttcataaactcaaaaataagccaatccaaacggccccaaata 41125861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 583 - 693
Target Start/End: Original strand, 589216 - 589325
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcg-cttatttatttgcataaactattttttataaactaaaaa 681  Q
    |||| |||||||||||||||| || ||| || ||||| || |||| |||||||||||    ||||||||||||||||| ||||||||||||| || ||||    
T  589216 aaaaaaacttatgaagataaa-aattttgat-agtgaaaacttatgaattaacataaaaaacttatttatttgcataagctattttttataagctcaaaa 589313  T
Q  682 ataaatcaatcc 693  Q
    ||||||||||||    
T  589314 ataaatcaatcc 589325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 615 - 682
Target Start/End: Original strand, 24030308 - 24030375
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||||| |||| |||||||||||  |||||||||||||||||| |||||||| |||| ||||||||    
T  24030308 agtgagaacttatgaattaacataaaagcttatttatttgcataagctatttttaataagctaaaaaa 24030375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 615 - 685
Target Start/End: Complemental strand, 41059781 - 41059711
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||||| ||||| |||| || ||||||||    
T  41059781 agtgagaacttatgaattaacataaaagcttatttatttgcataaactgtttttcataagctcaaaaataa 41059711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 615 - 696
Target Start/End: Original strand, 6125380 - 6125461
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    ||||||||||||| |||||| ||||  |||||||||||||||||| |||||||| ||||  | ||||| || ||||||||||    
T  6125380 agtgagaaattatgaattaatataaaagcttatttatttgcataagctatttttcataagttcaaaaagaagtcaatccaaa 6125461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 583 - 681
Target Start/End: Original strand, 28625544 - 28625640
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaa 681  Q
    |||||| ||||||||||||  ||| |||| | ||||||||  ||| |||||||||||  ||||||||||||||||||  ||||||| |||| |||||||    
T  28625544 aaaacagcttatgaagata--caattttcgttagtgagaacctatgaattaacataaaagcttatttatttgcataagttatttttcataagctaaaaa 28625640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 649 - 696
Target Start/End: Complemental strand, 42095384 - 42095337
Alignment:
Q  649 tatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  42095384 tatttgcatgaactattttttataaacttaaaaataagtcaatccaaa 42095337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 615 - 696
Target Start/End: Complemental strand, 10537219 - 10537137
Alignment:
Q  615 agtgagaaattattaattaacataatc-gcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||| |||| |||||||||||   |||||| ||||||||||| |||||||| ||||||| ||||||||  |||||||||    
T  10537219 agtgagaacttatgaattaacataaaaagcttatatatttgcataagctatttttcataaactcaaaaataagccaatccaaa 10537137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 643 - 685
Target Start/End: Original strand, 19840150 - 19840192
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||||||||| |||||||||||||||||| |||||||||||    
T  19840150 cttatttatttgtataaactattttttataagctaaaaaataa 19840192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 615 - 685
Target Start/End: Complemental strand, 29922181 - 29922111
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||||  |||| |||||| ||||  |||||||||||||||||| |||||||| ||||||| ||||||||    
T  29922181 agtgagagcttatgaattaatataaaagcttatttatttgcataagctatttttcataaactcaaaaataa 29922111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 642 - 696
Target Start/End: Original strand, 35536965 - 35537019
Alignment:
Q  642 gcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||||||||||||| |||||||| |||| || |||||||| ||||||||||    
T  35536965 gcttatttatttgcataagctatttttcataatctcaaaaataagtcaatccaaa 35537019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 629 - 696
Target Start/End: Complemental strand, 2878655 - 2878587
Alignment:
Q  629 aattaacataatcgcttatttatttgcataaactatttttt-ataaactaaaaaataaatcaatccaaa 696  Q
    |||||||||||  |||||||||||| ||||| ||||||||| |||| |||||||||||  |||||||||    
T  2878655 aattaacataaaagcttatttatttacataagctattttttcataagctaaaaaataagccaatccaaa 2878587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 642 - 698
Target Start/End: Complemental strand, 11706876 - 11706820
Alignment:
Q  642 gcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaatg 698  Q
    |||||||||||||||||| |||||||| |||| |||||||||||  ||||| |||||    
T  11706876 gcttatttatttgcataagctatttttgataagctaaaaaataagccaatcgaaatg 11706820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 632 - 696
Target Start/End: Original strand, 12467379 - 12467443
Alignment:
Q  632 taacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    ||||||||  ||||||||||||||||||  ||||||| |||| |||||||||||  |||||||||    
T  12467379 taacataaaagcttatttatttgcataagttatttttcataacctaaaaaataagccaatccaaa 12467443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 624 - 696
Target Start/End: Original strand, 13739332 - 13739404
Alignment:
Q  624 ttattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| ||||| |||||  ||||||||||||||||||  ||||||| ||||||| ||||||||  |||||||||    
T  13739332 ttatgaattatcataaaagcttatttatttgcataagttatttttcataaactcaaaaataagccaatccaaa 13739404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 624 - 696
Target Start/End: Complemental strand, 17868187 - 17868115
Alignment:
Q  624 ttattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||||||||||  | |||||||||||||||| |||||||  |||| |||||||||||  |||||||||    
T  17868187 ttatcaattaacataaaaggttatttatttgcataagctattttccataagctaaaaaataagccaatccaaa 17868115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 624 - 696
Target Start/End: Original strand, 40697109 - 40697181
Alignment:
Q  624 ttattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||||||||||  ||||||||||||| |||| |||||||| |||| || ||||||||  |||||||||    
T  40697109 ttatgaattaacataaaagcttatttatttgtataagctatttttcataagctcaaaaataagccaatccaaa 40697181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 685
Target Start/End: Original strand, 1943067 - 1943159
Alignment:
Q  591 ttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||||||||  ||| |||||| |||||||| |||| ||||| |||||  |||||||||||||||||| | ||||||  ||| || ||||||||    
T  1943067 ttatgaagata--caattttcattagtgagaacttatgaattagcataaaagcttatttatttgcataagccatttttcgtaagctcaaaaataa 1943159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 668
Target Start/End: Complemental strand, 5559934 - 5559858
Alignment:
Q  590 cttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttt 668  Q
    ||||||||||||  ||| |||| | |||||||| |||| |||| ||||||  |||||||||||||||||| ||||||||    
T  5559934 cttatgaagata--caattttcgttagtgagaatttatgaatttacataaaagcttatttatttgcataagctattttt 5559858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 615 - 685
Target Start/End: Complemental strand, 2577420 - 2577350
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||||| |||| |||||||||||    |||||||||||||||| |||||||| |||| || ||||||||    
T  2577420 agtgagaacttatgaattaacataacaatttatttatttgcataagctatttttcataagctcaaaaataa 2577350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 644 - 698
Target Start/End: Original strand, 2670182 - 2670236
Alignment:
Q  644 ttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaatg 698  Q
    ||||||||||||||||| || |||| |||| ||  ||||||||||||||||||||    
T  2670182 ttatttatttgcataaattacttttcataagcttgaaaataaatcaatccaaatg 2670236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 615 - 685
Target Start/End: Original strand, 3977567 - 3977637
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    ||||||||  ||| |||||||||||  |||||||||||||||||| || ||||| |||| || ||||||||    
T  3977567 agtgagaacgtatgaattaacataaaagcttatttatttgcataagctgtttttaataagctgaaaaataa 3977637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 685
Target Start/End: Complemental strand, 22201895 - 22201853
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||||||||| ||||||||||||| |||| |||||||||||    
T  22201895 cttatttatttgtataaactatttttcataagctaaaaaataa 22201853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 615 - 696
Target Start/End: Original strand, 27806009 - 27806091
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactatttttt-ataaactaaaaaataaatcaatccaaa 696  Q
    ||||| || |||| |||||||||||  | |||||||||||||||| ||||||||| |||| ||||||| |||  |||||||||    
T  27806009 agtgaaaacttataaattaacataaaagtttatttatttgcataagctattttttaataagctaaaaagtaagccaatccaaa 27806091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 692
Target Start/End: Complemental strand, 589170 - 589122
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataaatcaatc 692  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||| |||||    
T  589170 cttatttatttgcataaactattttgtat-aacaaaaaaataaaccaatc 589122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 681
Target Start/End: Original strand, 15364104 - 15364161
Alignment:
Q  624 ttattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaa 681  Q
    |||| |||||||||||  ||||||||||||||||||  | ||||||||||||| ||||    
T  15364104 ttatgaattaacataaaagcttatttatttgcataagttcttttttataaactcaaaa 15364161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 5e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 629 - 696
Target Start/End: Complemental strand, 21025197 - 21025130
Alignment:
Q  629 aattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||||||  |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  21025197 aattaacataaaagcttatttatttgcataagctatttttgataagctaaaaaataaatcaatccaaa 21025130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 616 - 696
Target Start/End: Complemental strand, 35071419 - 35071339
Alignment:
Q  616 gtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    ||||||| |||| |||||||||||  |||||||||||||||||| |||||||| |||| |||||||||||  |||||||||    
T  35071419 gtgagaacttatgaattaacataaaagcttatttatttgcataagctatttttcataagctaaaaaataagccaatccaaa 35071339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 601 - 696
Target Start/End: Complemental strand, 10755289 - 10755194
Alignment:
Q  601 aaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||| |||| | ||| |||| |||| |||||||||||  ||||||||||||||||||||||||||| | || || |||||||| ||||||||||    
T  10755289 aaacaattttcgttagtaagaacttatgaattaacataaaagcttatttatttgcataaactatttttcagaagctcaaaaataagtcaatccaaa 10755194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 629 - 696
Target Start/End: Complemental strand, 12816879 - 12816812
Alignment:
Q  629 aattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||||||  ||||||||||||||||||||||||||| |||| || |||||||| | ||||||||    
T  12816879 aattaacataaaagcttatttatttgcataaactatttttcataagctcaaaaataagttaatccaaa 12816812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 696
Target Start/End: Complemental strand, 21871248 - 21871195
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||||||| ||||||||||||| |||| ||||||||||| ||||||||||    
T  21871248 cttatttatttgtataaactatttttcataagctaaaaaataagtcaatccaaa 21871195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 642 - 685
Target Start/End: Original strand, 6805847 - 6805890
Alignment:
Q  642 gcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  6805847 gcttatttatttgcataaactattctttataagctaaaaaataa 6805890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 615 - 685
Target Start/End: Complemental strand, 9201713 - 9201643
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||||| |||| |||||||||||  |||||||||||||||||| | |||||  |||| |||||||||||    
T  9201713 agtgagaacttatgaattaacataaaagcttatttatttgcataagcgattttccataagctaaaaaataa 9201643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 696
Target Start/End: Complemental strand, 9202421 - 9202310
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||| | ||||||||||  ||| ||| || ||||| || |||| |||||||||||  |||||||||||  ||||| |||||||| |||| ||||||||    
T  9202421 aaaacagcatatgaagata--caatttttattagtgataacttatgaattaacataaaagcttatttattaacataagctatttttcataagctaaaaaa 9202324  T
Q  683 taaatcaatccaaa 696  Q
    |||  |||||||||    
T  9202323 taagccaatccaaa 9202310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 624 - 696
Target Start/End: Complemental strand, 9764374 - 9764302
Alignment:
Q  624 ttattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||||||||||  ||||||||||||||||||| ||||||| ||||  | |||||||| ||||| ||||    
T  9764374 ttataaattaacataaaagcttatttatttgcataaattatttttcataagttcaaaaataagtcaatgcaaa 9764302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 685
Target Start/End: Original strand, 10687374 - 10687473
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    ||||||||||||| |||||  ||| |||| | || ||||| |||| || | ||||||  |||||||||||||||||||||| |||| |||| ||||||||    
T  10687374 aaaacaacttatggagata--caattttcgttagcgagaacttatgaactgacataaaagcttatttatttgcataaacta-ttttcataagctaaaaaa 10687470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 681
Target Start/End: Complemental strand, 29623499 - 29623404
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaa 681  Q
    ||||||||||||||| |||||    |||| | |||||||| |||| |||||||||||   ||||||||||||||||| |||||||| ||||||| ||||    
T  29623499 aaaacaacttatgaaaataaagt--tttcgttagtgagaacttatgaattaacataaat-cttatttatttgcataagctatttttcataaactcaaaa 29623404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 673
Target Start/End: Complemental strand, 32675911 - 32675823
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    |||| ||||||||||||||  ||| |||||| |||||||| |||| |||||| ||||   |||||||||||||||||  ||||||| ||||    
T  32675911 aaaataacttatgaagata--caattttcattagtgagaacttatgaattaatataaaaacttatttatttgcataagttatttttcataa 32675823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 617 - 667
Target Start/End: Complemental strand, 3210979 - 3210929
Alignment:
Q  617 tgagaaattattaattaacataatcgcttatttatttgcataaactatttt 667  Q
    |||||| |||| |||||||||||  |||||||||||||||||| |||||||    
T  3210979 tgagaacttatgaattaacataaaagcttatttatttgcataagctatttt 3210929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 603 - 673
Target Start/End: Original strand, 6752894 - 6752964
Alignment:
Q  603 acaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    |||| |||||| |||||| | |||| |||||| ||||  |||||||||||||||||| |||||||| ||||    
T  6752894 acaattttcattagtgaggatttatgaattaatataaaagcttatttatttgcataagctatttttcataa 6752964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 615 - 673
Target Start/End: Original strand, 23239341 - 23239399
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    |||||||| |||| |||||| ||||  |||||||||||||||||| |||||||| ||||    
T  23239341 agtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataa 23239399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 695
Target Start/End: Complemental strand, 2027198 - 2027089
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||| ||||||||||||  ||| |||  | ||| |||| |||| |||||||||||  | |||| ||||||||||| |||||||| |||| || |||||    
T  2027198 aaaacagcttatgaagata--caacttttgttagtaagaacttatgaattaacataaaagtttatctatttgcataagctatttttcataagct-aaaaa 2027102  T
Q  683 taaatcaatccaa 695  Q
    ||| |||||||||    
T  2027101 taagtcaatccaa 2027089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 696
Target Start/End: Original strand, 6958718 - 6958798
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||| |||| |||||  ||||  |||||||||| ||||||| |||||||  ||||||||||||||||  |||||||||    
T  6958718 agtgagaagttataaattagtataaaagcttatttatgtgcataagctattttc-ataaactaaaaaataagacaatccaaa 6958798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 669
Target Start/End: Complemental strand, 12817107 - 12817046
Alignment:
Q  608 tttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactatttttt 669  Q
    |||||| ||||| ||  ||| |||||||||||  |||||||||||||||||| |||||||||    
T  12817107 tttcattagtgaaaacatataaattaacataaaagcttatttatttgcataagctatttttt 12817046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 583 - 696
Target Start/End: Complemental strand, 7480921 - 7480810
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    ||||||||||| |||||||  ||| |||||| ||| |||| |||| |||||||||||   ||||||||||||||||| ||||||||||||| |||||| |    
T  7480921 aaaacaacttaggaagata--caattttcattagtcagaacttatgaattaacataaaaacttatttatttgcataatctattttttataagctaaaaga 7480824  T
Q  683 taaatcaatccaaa 696  Q
    ||||  ||||||||    
T  7480823 taaactaatccaaa 7480810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 615 - 696
Target Start/End: Original strand, 8832551 - 8832632
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    ||||| || |||| |||||||||||  |||||||||||||||||| |||||||| |||| ||||||||||| ||||||||||    
T  8832551 agtgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcataagctaaaaaataagtcaatccaaa 8832632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 621 - 698
Target Start/End: Original strand, 37420006 - 37420083
Alignment:
Q  621 aaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaatg 698  Q
    ||||||| |||||||||||  ||||||||||||||||||| ||||||| |||| |||||||||||  |||||||||||    
T  37420006 aaattatgaattaacataaaagcttatttatttgcataaattatttttcataagctaaaaaataagccaatccaaatg 37420083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 583 - 685
Target Start/End: Original strand, 4026989 - 4027089
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||| ||||||||||||  ||| |||  | |||||||| |||| |||||||||||| |||||||||||||||||| |||||||| |||| || |||||    
T  4026989 aaaacagcttatgaagata--caatttttgttagtgagaacttatgaattaacataatagcttatttatttgcataagctatttttcataagcttaaaaa 4027086  T
Q  683 taa 685  Q
    |||    
T  4027087 taa 4027089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 648 - 698
Target Start/End: Complemental strand, 43787791 - 43787741
Alignment:
Q  648 ttatttgcataaactattttttataaactaaaaaataaatcaatccaaatg 698  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  43787791 ttatttgcataaactatttttcataagctaaaaaataagtcaatccaaatg 43787741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 696
Target Start/End: Complemental strand, 36501537 - 36501426
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||| ||||||||||||||  | || | | |||||||| | || |||||||||||  |||||||||||||||||| |||||||| | || || |||||    
T  36501537 aaaacagcttatgaagataaa--atttgcgttagtgagaactcatgaattaacataaaagcttatttatttgcataagctatttttcacaagctcaaaaa 36501440  T
Q  683 taaatcaatccaaa 696  Q
    |||  |||||||||    
T  36501439 taagccaatccaaa 36501426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 615 - 685
Target Start/End: Original strand, 38216113 - 38216183
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||||| |||| | |||||||||  |||||||||||||||||| ||||||||  ||| |||||||||||    
T  38216113 agtgagaacttatgagttaacataaaagcttatttatttgcataagctatttttcgtaagctaaaaaataa 38216183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 696
Target Start/End: Original strand, 17797332 - 17797385
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||||||||||||||| ||||  ||||  |||||||||||||||||||||    
T  17797332 cttatttatttgcataaactgttttgcataagttaaaaaataaatcaatccaaa 17797385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 696
Target Start/End: Original strand, 29080749 - 29080822
Alignment:
Q  624 ttattaattaacataatcgcttatttatttgcataaactattttttataaact-aaaaaataaatcaatccaaa 696  Q
    |||| |||||||||||   ||||||||||| ||| |||||||||| |||| || ||||||||||||||||||||    
T  29080749 ttataaattaacataaaatcttatttattttcattaactatttttcataagctaaaaaaataaatcaatccaaa 29080822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 696
Target Start/End: Original strand, 29774839 - 29774920
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||| |||| ||||||| |||  |||||||||||||| ||||||||||||  | | || |||||||| ||||||||||    
T  29774839 agtgagaacttatgaattaacgtaaaagcttatttatttgcttaaactatttttcgttagctcaaaaataagtcaatccaaa 29774920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 673
Target Start/End: Original strand, 21788521 - 21788609
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    |||||||||||||||||||||  | |||| | |||||||  |||| |||||| ||||  ||||||||||||||||||  ||||||| ||||    
T  21788521 aaaacaacttatgaagataaa--attttcgttagtgagagcttatgaattaatataaaagcttatttatttgcataagttatttttcataa 21788609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 691
Target Start/End: Original strand, 39070964 - 39071011
Alignment:
Q  644 ttatttatttgcataaactattttttataaactaaaaaataaatcaat 691  Q
    |||||||||| |||||| ||||||||||||| | ||||||||||||||    
T  39070964 ttatttatttacataaattattttttataaattcaaaaataaatcaat 39071011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 642 - 696
Target Start/End: Original strand, 4533443 - 4533497
Alignment:
Q  642 gcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||||||||||||| |||||||| |||| || |||||||| | ||||||||    
T  4533443 gcttatttatttgcataagctatttttcataagctcaaaaataagttaatccaaa 4533497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 698
Target Start/End: Complemental strand, 33321290 - 33321221
Alignment:
Q  629 aattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaatg 698  Q
    |||||||||||  | |||||||||||||||| |||||||  |||| || ||||||||  |||||||||||    
T  33321290 aattaacataaaggtttatttatttgcataagctattttacataagctcaaaaataagccaatccaaatg 33321221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 7e-17; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 619 - 696
Target Start/End: Original strand, 28879153 - 28879230
Alignment:
Q  619 agaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||| |||||||||||  |||||||||||||||||| |||||||| |||| ||||||||||| ||||||||||    
T  28879153 agaacttatgaattaacataaaagcttatttatttgcataagctatttttcataagctaaaaaataagtcaatccaaa 28879230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 584 - 692
Target Start/End: Original strand, 32131505 - 32131611
Alignment:
Q  584 aaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaat 683  Q
    ||||||| ||||||||||  ||| |||||  |||||||| |||| |||||||||||  |||||| |||||||||||||||||||| |||| || ||||||    
T  32131505 aaacaacctatgaagata--caattttcaatagtgagaacttatgaattaacataaaagcttatctatttgcataaactatttttcataagctcaaaaat 32131602  T
Q  684 aaatcaatc 692  Q
    | |||||||    
T  32131603 acatcaatc 32131611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 603 - 696
Target Start/End: Complemental strand, 32213019 - 32212926
Alignment:
Q  603 acaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||||| |||||||| |||| || ||||||||  |||||||||||||||||| |||||||| |||| | |||||||||  |||||||||    
T  32213019 acaattttcattagtgagaacttataaaataacataaaagcttatttatttgcataagctatttttcataagcaaaaaaataagccaatccaaa 32212926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 696
Target Start/End: Original strand, 10213759 - 10213870
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||| ||||||||||  ||||| |||  | |||||||| |||| ||||||||||   |||||||||||||||||| |||||||| |||| || |||||    
T  10213759 aaaacagcttatgaaga--aacaatttttgttagtgagaacttatgaattaacatacaagcttatttatttgcataagctatttttcataagctcaaaaa 10213856  T
Q  683 taaatcaatccaaa 696  Q
    |||  |||||||||    
T  10213857 taatccaatccaaa 10213870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 696
Target Start/End: Complemental strand, 34286586 - 34286475
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||| ||||||||||||  ||| |||| | || ||||| |||| |||||| ||||  |||||||||||||||||| |||||||| |||| || |||||    
T  34286586 aaaacagcttatgaagata--caattttcgttagggagaacttatgaattaatataaaagcttatttatttgcataacctatttttcataagctcaaaaa 34286489  T
Q  683 taaatcaatccaaa 696  Q
    ||| ||||| ||||    
T  34286488 taagtcaattcaaa 34286475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 696
Target Start/End: Original strand, 13131553 - 13131618
Alignment:
Q  631 ttaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||||  |||||||||||||||||  |||||||| |||| || |||||||| ||||||||||    
T  13131553 ttaacataaaagcttatttatttgcatatgctatttttcataagcttaaaaataagtcaatccaaa 13131618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 624 - 696
Target Start/End: Original strand, 24087274 - 24087346
Alignment:
Q  624 ttattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||||| ||||  |||||||||||||||||| |||||||| ||  ||| |||||||| ||||||||||    
T  24087274 ttataaattaaaataaaagcttatttatttgcataagctatttttcattcactcaaaaataagtcaatccaaa 24087346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 578 - 673
Target Start/End: Complemental strand, 25465874 - 25465781
Alignment:
Q  578 tatgcaaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    |||| |||||||||||||||||||  ||| |||  | | ||| || |||| |||||||||||  |||||||||||||||||| |||||||| ||||    
T  25465874 tatgaaaaacaacttatgaagata--caatttttgttactgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcataa 25465781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 588 - 673
Target Start/End: Complemental strand, 25333718 - 25333635
Alignment:
Q  588 aacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    ||||||||||||||  ||| |||| | ||||| || |||| |||||||||||  |||||||||||| ||||| |||||||| ||||    
T  25333718 aacttatgaagata--caattttcgttagtgaaaacttatgaattaacataaaagcttatttatttacataagctatttttcataa 25333635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 616 - 682
Target Start/End: Original strand, 32975782 - 32975848
Alignment:
Q  616 gtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    ||||||| |||| |||||| ||||  |||||||||||||||||| |||||||| |||| || |||||    
T  32975782 gtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaaaaa 32975848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 619 - 696
Target Start/End: Complemental strand, 24350507 - 24350430
Alignment:
Q  619 agaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||| |||||||||||   ||||||||||||||||| ||| |||| |||| || |||||||| ||| ||||||    
T  24350507 agaacttatgaattaacataaaatcttatttatttgcataagctagttttcataagctcaaaaataagtcattccaaa 24350430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 673
Target Start/End: Complemental strand, 41145395 - 41145330
Alignment:
Q  608 tttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    |||||| |||||||| |||| |||||| |||    |||||||||||||||||||||||||| ||||    
T  41145395 tttcattagtgagaacttatgaattaatatataaacttatttatttgcataaactatttttcataa 41145330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 7e-17; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 583 - 695
Target Start/End: Complemental strand, 36255058 - 36254948
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||| ||||||||||||  ||| ||| || |||||||| |||| |||||||||||  |||||||||| ||||||| |||||||| |||| | ||||||    
T  36255058 aaaacagcttatgaagata--caattttaattagtgagaacttatgaattaacataaaagcttatttatctgcataagctatttttcataagcaaaaaaa 36254961  T
Q  683 taaatcaatccaa 695  Q
    ||| |||||||||    
T  36254960 taagtcaatccaa 36254948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 615 - 696
Target Start/End: Complemental strand, 488376 - 488295
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||| |||| |||||||||||  |||||||||||| ||||| ||||||||||||| || |||| ||| ||||||||||    
T  488376 agtgagaacttatgaattaacataaaagcttatttatttccataagctattttttataagcttaaaagtaagtcaatccaaa 488295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 603 - 696
Target Start/End: Original strand, 36740986 - 36741079
Alignment:
Q  603 acaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||||| |||||||| |||| ||| |||| ||  |||||||||||||||||| |||||||| |||| |||||||||||  |||||||||    
T  36740986 acaattttcattagtgagaacttatgaatcaacacaaaagcttatttatttgcataagctatttttcataagctaaaaaataagccaatccaaa 36741079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 615 - 696
Target Start/End: Original strand, 48721914 - 48721995
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||| |||| |||||| ||||  ||||||||||||| ||||| |||||||||||| ||||||||||| ||||| ||||    
T  48721914 agtgagaacttatgaattaatataaaagcttatttatttgtataaattattttttataagctaaaaaataagtcaattcaaa 48721995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 625 - 685
Target Start/End: Original strand, 35405787 - 35405847
Alignment:
Q  625 tattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||||||||||||  |||||||||||||||||| |||||||| |||| |||||||||||    
T  35405787 tattaattaacataaaagcttatttatttgcataagctatttttcataagctaaaaaataa 35405847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 583 - 698
Target Start/End: Complemental strand, 48591446 - 48591333
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||| ||||||||||||  ||| |||| | | |||||| |||| ||||||| |||  |||||||||||||||||| |||||||| |||| || |||||    
T  48591446 aaaacagcttatgaagata--caattttcgttaatgagaacttatgaattaacgtaaaagcttatttatttgcataagctatttttcataagctcaaaaa 48591349  T
Q  683 taaatcaatccaaatg 698  Q
    |||  |||||||||||    
T  48591348 taagccaatccaaatg 48591333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 615 - 673
Target Start/End: Complemental strand, 34526329 - 34526271
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||||||||||| ||||    
T  34526329 agtgagaacttatgaattaacataaaagcttatttatttgcataaactatttttcataa 34526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 696
Target Start/End: Original strand, 28074486 - 28074539
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    ||||||||||||||||| |||||||| ||||||||||||||||  |||||||||    
T  28074486 cttatttatttgcataagctatttttcataaactaaaaaataagccaatccaaa 28074539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 643 - 696
Target Start/End: Complemental strand, 39932738 - 39932685
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||||||||||||||||||||||||||  |  ||||||||||||||||||    
T  39932738 cttatttatttgcataaactattttttataagattgaaaataaatcaatccaaa 39932685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 624 - 696
Target Start/End: Original strand, 3564309 - 3564381
Alignment:
Q  624 ttattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||||||||||  | |||||||||||||||| |||||||| |||| || |||||||| ||||||||||    
T  3564309 ttataaattaacataaaagattatttatttgcataagctatttttcataagctcaaaaataagtcaatccaaa 3564381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 578 - 668
Target Start/End: Complemental strand, 11256688 - 11256600
Alignment:
Q  578 tatgcaaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttt 668  Q
    |||| |||||| ||||||||||||  ||| |||  | || ||||| |||| |||||||||||  |||||||||||||||||||||||||||    
T  11256688 tatgaaaaacagcttatgaagata--caattttagttagcgagaacttatgaattaacataaaagcttatttatttgcataaactattttt 11256600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 609 - 696
Target Start/End: Complemental strand, 12495642 - 12495555
Alignment:
Q  609 ttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    ||||| |||||||| |||| |||||||||||   ||||||||||||||||| ||| |||| |||| || ||||||||  |||||||||    
T  12495642 ttcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttcataagctcaaaaataagacaatccaaa 12495555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 617 - 696
Target Start/End: Original strand, 28663668 - 28663747
Alignment:
Q  617 tgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||| |||| || ||||||||  ||||| ||| ||||||||||||||||| |||| || |||||||| ||||||||||    
T  28663668 tgagaacttatgaactaacataaaagcttaattagttgcataaactatttttcataagctcaaaaataagtcaatccaaa 28663747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 643 - 694
Target Start/End: Original strand, 30956806 - 30956857
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataaatcaatcca 694  Q
    ||||||||||||||||| |||||||| |||| ||||||||||| ||||||||    
T  30956806 cttatttatttgcataagctatttttcataagctaaaaaataagtcaatcca 30956857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 615 - 685
Target Start/End: Original strand, 897064 - 897134
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    ||||| || |||| |||||| ||||  ||||||||||||||||||||||||||| ||||  ||||||||||    
T  897064 agtgaaaacttataaattaatataaaagcttatttatttgcataaactatttttcataagttaaaaaataa 897134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 696
Target Start/End: Original strand, 23335706 - 23335817
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||| ||||||||||||  ||| |||||| |||||||| |||| |||||||||||   ||| |||| |||||| | |||||| | |||| ||||||||    
T  23335706 aaaacagcttatgaagata--caattttcataagtgagaacttatgaattaacataaaaacttgtttaattgcattagctatttctcataagctaaaaaa 23335803  T
Q  683 taaatcaatccaaa 696  Q
    |||  |||||||||    
T  23335804 taaggcaatccaaa 23335817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 696
Target Start/End: Complemental strand, 38345844 - 38345734
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||||||||||||||||  ||| ||| || ||  |||| |||| |||||||||||  |||||||||||| ||||| ||| ||||||||| || |||||    
T  38345844 aaaacaacttatgaagata--caatttttattagccagaacttatgaattaacataaaagcttatttatttacataagcta-tttttataagctcaaaaa 38345748  T
Q  683 taaatcaatccaaa 696  Q
    |||  |||||||||    
T  38345747 taagccaatccaaa 38345734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 644 - 682
Target Start/End: Complemental strand, 43415251 - 43415213
Alignment:
Q  644 ttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  43415251 ttatttatttacataaactattttttataaactaaaaaa 43415213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 603 - 668
Target Start/End: Complemental strand, 9153586 - 9153521
Alignment:
Q  603 acaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttt 668  Q
    |||| |||||| |||||||| |||| |||||||||||  | |||||||||||||||| ||||||||    
T  9153586 acaattttcatcagtgagaatttataaattaacataaaagtttatttatttgcataagctattttt 9153521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 619 - 696
Target Start/End: Original strand, 48667768 - 48667845
Alignment:
Q  619 agaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||| |||||||||||  |||||||||||||||||| |||||||| || | || ||||||||  |||||||||    
T  48667768 agaacttatgaattaacataaaagcttatttatttgcataagctatttttcatgagcttaaaaataagccaatccaaa 48667845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 583 - 682
Target Start/End: Original strand, 22273844 - 22273941
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||| ||||||||||||  ||| |||  | |||||||| |||| |||||||||||  | |||||||||||||||| ||||||||  ||| ||||||||    
T  22273844 aaaacagcttatgaagata--caatttttgttagtgagaagttatgaattaacataaaagtttatttatttgcataatctatttttcgtaagctaaaaaa 22273941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 686
Target Start/End: Original strand, 23297532 - 23297600
Alignment:
Q  618 gagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaa 686  Q
    ||||| |||| ||||| |||||  |||||||||||||||||| |||||||| |||| || |||||||||    
T  23297532 gagaacttatgaattagcataaaagcttatttatttgcataagctatttttcataagctcaaaaataaa 23297600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 673
Target Start/End: Complemental strand, 18630917 - 18630829
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    |||||| ||||||||||||||    |||| | |||||||| |||| |||||| ||||  |||||||||||||||||| |||||||| ||||    
T  18630917 aaaacagcttatgaagataaagt--tttcgttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataa 18630829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 682
Target Start/End: Original strand, 29877733 - 29877800
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||||| |||| |||||||||||  |||||| ||||||||||| |||||||| ||||  |||||||    
T  29877733 agtgagaacttatgaattaacataaaagcttatatatttgcataagctatttttcataagataaaaaa 29877800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 673
Target Start/End: Original strand, 41228967 - 41229055
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    ||||||||| |||||||||  ||| |||||| ||| |||| |||| |||||| ||||  ||| |||||||||||||| |||||||| ||||    
T  41228967 aaaacaactgatgaagata--caattttcattagttagaacttatgaattaatataaaagctaatttatttgcataagctatttttcataa 41229055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 684
Target Start/End: Complemental strand, 42611890 - 42611791
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaa-ctattttttataaactaaaaa 681  Q
    |||||||||||||||||||  ||  |||| | ||||| || |||| |||||||||||  ||||||||||||||||||| |||||||| |||| || ||||    
T  42611890 aaaacaacttatgaagata--cagttttcgt-agtgacaacttatgaattaacataaaagcttatttatttgcataaatctatttttcataagcttaaaa 42611794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 698
Target Start/End: Complemental strand, 52274104 - 52274049
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaatg 698  Q
    ||||||||| ||||||| |||||||| |||||||||||||||   |||||||||||    
T  52274104 cttatttatatgcataagctatttttcataaactaaaaaatacggcaatccaaatg 52274049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 591 - 696
Target Start/End: Original strand, 17222901 - 17223004
Alignment:
Q  591 ttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaa 690  Q
    |||||||||||  ||| |||| | ||| |||| |||| |||||||||||   |||||||||||| |||| |||||||| |||| || ||||||||  |||    
T  17222901 ttatgaagata--caattttcgttagttagaacttatgaattaacataaaaacttatttatttgaataagctatttttcataagctcaaaaataagccaa 17222998  T
Q  691 tccaaa 696  Q
    ||||||    
T  17222999 tccaaa 17223004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 583 - 655
Target Start/End: Original strand, 34633455 - 34633524
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgc 655  Q
    |||||||||||||||   | |||| |||||| |||||||| |||| |||||||||||  ||||||||||||||    
T  34633455 aaaacaacttatgaa---atacaattttcataagtgagaacttatgaattaacataaaagcttatttatttgc 34633524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 610 - 696
Target Start/End: Original strand, 41071439 - 41071525
Alignment:
Q  610 tcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||||||| || | |||||||||||  |||||||||||| | ||| |||||||| |||| |||||| ||||  |||||||||    
T  41071439 tcattagtgagaacttgtaaattaacataaaagcttatttattttcttaagctatttttcataagctaaaatataagccaatccaaa 41071525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 696
Target Start/End: Complemental strand, 7673474 - 7673421
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||||||||||||||| |||||||||| ||  ||||||||  ||||||||    
T  7673474 cttatttatttgcataaactgttttttataagctctaaaataaactaatccaaa 7673421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 603 - 696
Target Start/End: Original strand, 48687016 - 48687108
Alignment:
Q  603 acaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||||| |||||||| |||| ||||||||||   | |||||||||||||||| ||| |||| |||| || ||||||||  |||||||||    
T  48687016 acaattttcattagtgagaacttatgaattaacatataagtttatttatttgcataagcta-ttttcataagctcaaaaataaggcaatccaaa 48687108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 7e-17; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 584 - 696
Target Start/End: Original strand, 28690069 - 28690179
Alignment:
Q  584 aaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaat 683  Q
    ||||| ||||||||||||  ||| ||| || ||||||||||| | |||||||||||  |||||||||||||||||| |||||||| |||| || |||||     
T  28690069 aaacagcttatgaagata--caatttttattagtgagaaattctgaattaacataaaagcttatttatttgcataagctatttttcataagctcaaaaac 28690166  T
Q  684 aaatcaatccaaa 696  Q
    || ||||||||||    
T  28690167 aagtcaatccaaa 28690179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 615 - 696
Target Start/End: Original strand, 48819393 - 48819474
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||| |||| |||||||||||  |||||||||||||||||| |||||||| |||| |||||||||||  |||||||||    
T  48819393 agtgagaacttatgaattaacataaaagcttatttatttgcataagctatttttcataagctaaaaaataagccaatccaaa 48819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 583 - 696
Target Start/End: Original strand, 4068179 - 4068290
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||||||||||||||||  | | |||| | |||||||| |||| |||||| ||||  | |||||||||||||||| ||| |||| |||||||||||||    
T  4068179 aaaacaacttatgaagata--ctattttcgttagtgagaacttatgaattaatataaaagtttatttatttgcataagctacttttcataaactaaaaaa 4068276  T
Q  683 taaatcaatccaaa 696  Q
    |||  |||||||||    
T  4068277 taagccaatccaaa 4068290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 583 - 696
Target Start/End: Original strand, 37712131 - 37712242
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||||||||||||||||  ||| |||| | ||| |||| |||| |||||||||||  | |||||||||||||||| ||||||||  ||| || |||||    
T  37712131 aaaacaacttatgaagata--caactttcgttagtaagaacttatgaattaacataaaagtttatttatttgcataagctatttttcgtaagctcaaaaa 37712228  T
Q  683 taaatcaatccaaa 696  Q
    ||| ||||||||||    
T  37712229 taagtcaatccaaa 37712242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 624 - 696
Target Start/End: Original strand, 26988251 - 26988323
Alignment:
Q  624 ttattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||||||||||  ||| ||||||||||||||||||||||| |||| || |||||||| ||||||||||    
T  26988251 ttatgaattaacataaaagctaatttatttgcataaactatttttcataagctcaaaaataagtcaatccaaa 26988323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 616 - 696
Target Start/End: Original strand, 47413467 - 47413547
Alignment:
Q  616 gtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| ||||||| |||||||||||  |||||||||||||||||| |||||||| |||| || ||||||||  |||||||||    
T  47413467 gtgaaaaattataaattaacataaaagcttatttatttgcataagctatttttcataagctcaaaaataagccaatccaaa 47413547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 696
Target Start/End: Complemental strand, 37329434 - 37329323
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||| ||||||||||||  ||| |||| |  ||||||| |||| |||||||||||  ||||||||||||||||||  ||||||| |||| || |||||    
T  37329434 aaaacagcttatgaagata--caattttcgttggtgagaacttataaattaacataaaagcttatttatttgcataagttatttttcataagctcaaaaa 37329337  T
Q  683 taaatcaatccaaa 696  Q
    ||| || |||||||    
T  37329336 taagtcgatccaaa 37329323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 645 - 698
Target Start/End: Complemental strand, 26435137 - 26435084
Alignment:
Q  645 tatttatttgcataaactattttttataaactaaaaaataaatcaatccaaatg 698  Q
    |||||||||||||||||||||||| |||| || |||||||| ||||||||||||    
T  26435137 tatttatttgcataaactatttttcataagcttaaaaataagtcaatccaaatg 26435084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 615 - 696
Target Start/End: Complemental strand, 46500992 - 46500911
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    ||||| || |||| ||| |||||||  ||||||||||||||||||  ||||||||||||  |||||||||| ||||||||||    
T  46500992 agtgaaaacttataaatcaacataaaagcttatttatttgcataagttattttttataagataaaaaataagtcaatccaaa 46500911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 660
Target Start/End: Complemental strand, 16888988 - 16888913
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaa 660  Q
    |||||| ||||||||||||  ||| |||||| |||||||| |||| | |||||||||  |||||||||||||||||||    
T  16888988 aaaacagcttatgaagata--caattttcattagtgagaatttatgacttaacataaaagcttatttatttgcataaa 16888913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 603 - 696
Target Start/End: Complemental strand, 35897623 - 35897530
Alignment:
Q  603 acaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||| |||||| ||||| || |||| |||||||||||  | |||||||||| ||||| |||||||| ||||  | |||||||| ||||||||||    
T  35897623 acaattttcattagtgaaaatttataaattaacataaaagtttatttatttacataagctatttttcataagttcaaaaataagtcaatccaaa 35897530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 698
Target Start/End: Complemental strand, 41196688 - 41196619
Alignment:
Q  629 aattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaatg 698  Q
    |||||||||||  |||||||||||||||||| |||||||  |||| || ||||||||  |||||||||||    
T  41196688 aattaacataaaggcttatttatttgcataagctattttacataagctcaaaaataagccaatccaaatg 41196619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 617 - 673
Target Start/End: Original strand, 19220269 - 19220325
Alignment:
Q  617 tgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    ||||| ||||| |||||| ||||  ||||||||||||||||||||||||||| ||||    
T  19220269 tgagagattataaattaaaataaaagcttatttatttgcataaactatttttcataa 19220325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 615 - 695
Target Start/End: Complemental strand, 49738293 - 49738213
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaa 695  Q
    |||||||| |||| |||||| |||   |||||  || |||||||||| ||||||||||| ||||||||||| |||||||||    
T  49738293 agtgagaacttatgaattaatatagaagcttacatacttgcataaacaattttttataagctaaaaaataagtcaatccaa 49738213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 696
Target Start/End: Original strand, 10365278 - 10365345
Alignment:
Q  629 aattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||||||  ||||||| |||||||||| |||||||| |||| || |||||||| ||||| ||||    
T  10365278 aattaacataaaagcttattcatttgcataagctatttttcataagcttaaaaataagtcaattcaaa 10365345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 673
Target Start/End: Original strand, 13039011 - 13039099
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    |||||||||||||||||||||    |||| | |||||||| |||| |||||| ||||  | |||||||||||||||| |||||||| ||||    
T  13039011 aaaacaacttatgaagataaagt--tttcgttagtgagaagttatgaattaatataaaagtttatttatttgcataagctatttttcataa 13039099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 685
Target Start/End: Original strand, 42367051 - 42367114
Alignment:
Q  622 aattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||| |||||||||||   ||||||||||||||||| |||||||| |||| || ||||||||    
T  42367051 aattatgaattaacataagaacttatttatttgcataagctatttttcataagcttaaaaataa 42367114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 673
Target Start/End: Complemental strand, 46689572 - 46689484
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    ||||||||||||||| |||||  | |||| | |||||||| |||| |||||| ||||| | ||||||||||||||||  ||||||| ||||    
T  46689572 aaaacaacttatgaaaataaa--attttcgttagtgagaacttatgaattaatataatagtttatttatttgcataagttatttttcataa 46689484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 673
Target Start/End: Complemental strand, 52363861 - 52363806
Alignment:
Q  618 gagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    ||||| |||| |||||| ||||  |||||||||||| |||||||||||||||||||    
T  52363861 gagaacttataaattaaaataaaagcttatttatttacataaactattttttataa 52363806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 615 - 673
Target Start/End: Complemental strand, 9572776 - 9572718
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataa 673  Q
    |||||||| |||| |||||| ||||  |||||||||||||||||| |||||||| ||||    
T  9572776 agtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataa 9572718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 618 - 696
Target Start/End: Original strand, 9575425 - 9575503
Alignment:
Q  618 gagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    ||||| |||| ||||||||||||   ||||||||||| ||||||||||||| ||||  | ||||||||| |||| ||||    
T  9575425 gagaatttataaattaacataataatttatttatttgtataaactatttttcataagtttaaaaataaaacaattcaaa 9575503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 642 - 696
Target Start/End: Complemental strand, 37712090 - 37712036
Alignment:
Q  642 gcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    ||||||| ||||||||||||| ||||| || | || |||||||||||||||||||    
T  37712090 gcttattcatttgcataaactgtttttcattagctcaaaaataaatcaatccaaa 37712036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 696
Target Start/End: Original strand, 28870297 - 28870378
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||| |||| ||| |||||||  ||||||||||||||| ||  ||||||| |||| ||||||| |||  |||||||||    
T  28870297 agtgagaacttatgaatgaacataaaagcttatttatttgcaaaagttatttttcataagctaaaaattaagccaatccaaa 28870378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 664
Target Start/End: Original strand, 41003481 - 41003530
Alignment:
Q  615 agtgagaaattattaattaacataatcgcttatttatttgcataaactat 664  Q
    |||||||| ||||||||||||||||  | |||||||||||| ||||||||    
T  41003481 agtgagaacttattaattaacataaaagtttatttatttgcttaaactat 41003530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 583 - 696
Target Start/End: Original strand, 20685849 - 20685960
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||||||||||||||||  ||| |||||| |||||||| || | ||||| |||||   |||||||||||| |||| | |||||| |||| ||||||||    
T  20685849 aaaacaacttatgaagata--caattttcattagtgagaacttgtgaattatcataaaaacttatttatttggataagcaatttttcataagctaaaaaa 20685946  T
Q  683 taaatcaatccaaa 696  Q
    ||| ||||||||||    
T  20685947 taagtcaatccaaa 20685960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 583 - 696
Target Start/End: Complemental strand, 52895427 - 52895316
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||||||| ||||| ||  ||| |||| | |||||||| |||| |||||||||||  |||||||||||||| ||||| |||||| |||| || |||||    
T  52895427 aaaacaacttctgaagtta--caattttcgttagtgagaatttatgaattaacataaaagcttatttatttgcctaaacaatttttcataagctcaaaaa 52895330  T
Q  683 taaatcaatccaaa 696  Q
    ||||| ||||||||    
T  52895329 taaataaatccaaa 52895316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 696
Target Start/End: Complemental strand, 40240599 - 40240489
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||||||||||||||||  ||| |||| | |||||||  |||| |||||| ||||  |||||||||||||||||| |||||||| |||| ||  ||||    
T  40240599 aaaacaacttatgaagata--caattttcgttagtgagagcttatgaattaagataaaagcttatttatttgcataagctatttttcataagct-caaaa 40240503  T
Q  683 taaatcaatccaaa 696  Q
    ||| ||||||||||    
T  40240502 taagtcaatccaaa 40240489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 583 - 698
Target Start/End: Complemental strand, 48597889 - 48597775
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattatt-aattaacataatcgcttatttatttgcataaactattttttataaactaaaaa 681  Q
    |||||||||||||||||||  ||| |||| | |||||||| ||| | |||||||||||  ||||||||||||||| | |||||||||  ||| || ||||    
T  48597889 aaaacaacttatgaagata--caattttcgtcagtgagaacttaatgaattaacataaaagcttatttatttgcaaacactatttttcgtaagctcaaaa 48597792  T
Q  682 ataaatcaatccaaatg 698  Q
    ||||  |||||||||||    
T  48597791 ataagccaatccaaatg 48597775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 618 - 685
Target Start/End: Original strand, 31787619 - 31787686
Alignment:
Q  618 gagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    ||||| |||| |||||| |||| || ||||||||||||||||||||||||| |||| || ||||||||    
T  31787619 gagaacttatgaattaatataaacgtttatttatttgcataaactatttttcataagctcaaaaataa 31787686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 618 - 685
Target Start/End: Complemental strand, 46573443 - 46573376
Alignment:
Q  618 gagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    ||||| |||| |||||||||||  |||||||||||||||||| ||||||||  ||| |||||||||||    
T  46573443 gagaatttatgaattaacataaaagcttatttatttgcataagctatttttcctaagctaaaaaataa 46573376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 619 - 685
Target Start/End: Original strand, 35127312 - 35127377
Alignment:
Q  619 agaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||| |||| |||||||||||  ||||||||||||||||||| ||||||| |||| |||||||||||    
T  35127312 agaacttataaattaacataaa-gcttatttatttgcataaaatatttttaataagctaaaaaataa 35127377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 696
Target Start/End: Complemental strand, 43079956 - 43079845
Alignment:
Q  583 aaaacaacttatgaagataaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaa 682  Q
    |||||| ||||||||||||  ||| |||| ||| |||||| |||| ||||||| |||  ||||||||||||| |||| |||||||| |||| ||   |||    
T  43079956 aaaacagcttatgaagata--caattttcgtgattgagaacttatgaattaacttaaaagcttatttatttgaataagctatttttcataagctcgtaaa 43079859  T
Q  683 taaatcaatccaaa 696  Q
    ||| ||||||||||    
T  43079858 taagtcaatccaaa 43079845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 696
Target Start/End: Original strand, 29002836 - 29002889
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||||||||||||| |||||||||||| || |||||||| | ||||||||    
T  29002836 cttatttatttgcataaagtattttttataagctcaaaaataagttaatccaaa 29002889  T

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Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 699
Target Start/End: Complemental strand, 53261760 - 53261675
Alignment:
Q  615 agtgagaaattattaattaaca-taatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaatga 699  Q
    |||||||| |||| |||||||| |||  ||||||||| |||||||| |||||||| |||| || |||| ||| |||||||||||||    
T  53261760 agtgagaacttatgaattaacaataaaagcttatttaattgcataagctatttttcataagctcaaaactaagtcaatccaaatga 53261675  T

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Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 621 - 685
Target Start/End: Complemental strand, 32983277 - 32983213
Alignment:
Q  621 aaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    ||||||| |||||||||||    |||||||||||||||| ||||||||||||| || ||||||||    
T  32983277 aaattataaattaacataaaaatttatttatttgcataagctattttttataagctcaaaaataa 32983213  T

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Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 685
Target Start/End: Complemental strand, 40581082 - 40580998
Alignment:
Q  601 aaacaagtttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    |||||| |||| | |||||||| |||| |||||||||||   |||||||||||||||||  ||||||| || |||| ||||||||    
T  40581082 aaacaattttcgttagtgagaacttatgaattaacataaaatcttatttatttgcataagatatttttcatcaactcaaaaataa 40580998  T

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Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 643 - 691
Target Start/End: Complemental strand, 47520478 - 47520430
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataaatcaat 691  Q
    ||||||||| |||||||| ||||||||||||||| |||||||| |||||    
T  47520478 cttatttatatgcataaattattttttataaactcaaaaataagtcaat 47520430  T

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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 696
Target Start/End: Complemental strand, 17383526 - 17383473
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    ||||||||||||||||| ||||||| ||||||||  ||||||| | ||||||||    
T  17383526 cttatttatttgcataatctattttatataaactctaaaataagttaatccaaa 17383473  T

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Target: scaffold0015 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 624 - 692
Target Start/End: Complemental strand, 48611 - 48543
Alignment:
Q  624 ttattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatc 692  Q
    |||| |||||||||||  |||||||||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  48611 ttatgaattaacataaaagcttatttatttgcataagctattttgtataagctaaaaaataagtcaatc 48543  T

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Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 609 - 696
Target Start/End: Original strand, 24835 - 24922
Alignment:
Q  609 ttcatgagtgagaaattattaattaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    ||||| |||||||| |||| |||||||||||   ||||||||||||||||| ||| |||| |||| || ||||||||  |||||||||    
T  24835 ttcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttcataagctcaaaaataagacaatccaaa 24922  T

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Target: scaffold0048 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 696
Target Start/End: Complemental strand, 58844 - 58779
Alignment:
Q  631 ttaacataatcgcttatttatttgcataaactattttttataaactaaaaaataaatcaatccaaa 696  Q
    |||||||||| || ||||||||||||||| |||||||||||||  | ||||||||  |||||||||    
T  58844 ttaacataatagcatatttatttgcataagctattttttataagtttaaaaataagccaatccaaa 58779  T

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Target: scaffold0100 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 685
Target Start/End: Original strand, 38517 - 38559
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    ||||||||||||||||||||||||| ||||||||  |||||||    
T  38517 cttatttatttgcataaactattttatataaactttaaaataa 38559  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 685
Target Start/End: Original strand, 242704 - 242746
Alignment:
Q  643 cttatttatttgcataaactattttttataaactaaaaaataa 685  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||    
T  242704 cttatttatttgcataaactattttatataagctataaaataa 242746  T

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