View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18755_low_4 (Length: 401)
Name: NF18755_low_4
Description: NF18755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18755_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 19 - 385
Target Start/End: Original strand, 2694726 - 2695092
Alignment:
| Q |
19 |
cacagatgaaacagaaattgtgcatgggaagccgaaacagattgcgaattctaaagctagtacgtcatttcattttccgttggtgaatgttacagatgag |
118 |
Q |
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|||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
2694726 |
cacaaatgaaacagaaactgtgcatgggaagccgaagcagattgcgaattctaaagctagtacctcatttcattttccgttggtgaatgttacagatgag |
2694825 |
T |
|
| Q |
119 |
atggtgccaaaccgtattgatacattgggaatggctcagaaaactgagtctaattctcctactctagaaccggttcagcccttggtctcggctgaggttg |
218 |
Q |
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|||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |
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| T |
2694826 |
gtggtgccaaaccatattgatacattgagaatggctcagcaaactgagtctaattctcctactctagaactggttcagcccttggtctcagctgaggttg |
2694925 |
T |
|
| Q |
219 |
tatctcctggtgtgtctactgcaacaattacttcctctacacgagaagctgttccggaaacgcagaaagttcagcaaactaatatatgcctggttttaca |
318 |
Q |
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|||||||||| | ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2694926 |
catctcctggtatatctactgcaacgattacttcccctacacgagaagttgttccggaaacgcagaaagttcagcaaactaatatatgcctggttttaca |
2695025 |
T |
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| Q |
319 |
aaaagatttcaacttgattcggcatattattttggtaaaagataccgacaattccaatgctcctttc |
385 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
2695026 |
aaaagatttcaacttgattcggcatattattttggtaaaagatacagacaattccaatgctcctttc |
2695092 |
T |
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