View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18756_high_6 (Length: 278)
Name: NF18756_high_6
Description: NF18756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18756_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 33036658 - 33036920
Alignment:
| Q |
1 |
acatgttggtgcttggttctttcaagttatggaaacgaggttgtccctcaaacaatgcagggtgcatagttttgtgctacatgtaggaatcctagaagtg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33036658 |
acatgttggtgcttggttctttcaagttatggaaacgaggttgtccctcaaacaatgcagggtgcatagttttgtgctacatgtaggaatcctagaagtg |
33036757 |
T |
|
| Q |
101 |
atgcttcttgagatgatgtaggaggcacgatcctttactgcactatactctacgacgaggtggtcacctcagactctcttaatgagcttgcttgttggac |
200 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33036758 |
atgcttcttgagatgaggtaggaggcacgatcctttactgcactatactctacgacgaggtggtcacctcagactctcttaatgagcttgcttgttggac |
33036857 |
T |
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| Q |
201 |
aatcatgaggataattgggtcagatgtattaggttcatggcattgcaaataggaagtataaaa |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33036858 |
aatcatgaggataattgggtcagatgtattaggttcatggcattgcaaataggaagtataaaa |
33036920 |
T |
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