View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18757_high_25 (Length: 385)
Name: NF18757_high_25
Description: NF18757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18757_high_25 |
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Alignment Details
Target: chr8 (Bit Score: 346; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 10 - 367
Target Start/End: Original strand, 45345107 - 45345464
Alignment:
| Q |
10 |
gtcgaagaatatcctgtctcagtgataagttttctctatctgaaacagttttttggttttgatcacctccattatcaaaatgacaaccacttaaaaccaa |
109 |
Q |
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| T |
45345107 |
gtcgaacaatatcctgtctcagtgataagttttctcgatctgaaacagttttttggttttgatcacctccattatcaaaatgacagccacttaaaaccaa |
45345206 |
T |
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| Q |
110 |
attttcatccctttgtttaccattacctgctacttctctgaaccttgattctactctgagattattcaggattccttgagttctttcttgtggcaaagac |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45345207 |
attttcatccctttgtttaccattacctgctacttctctgaaccttgattctactctgagattattcaggattccttgagttctttcttgtggcaaagac |
45345306 |
T |
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| Q |
210 |
agcacactgcttggtggcatccatgacttttcctgtctttctgtttgcaaataaagtgaactaatgaacatatgaactcagcgtagtcaacgaatagtac |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45345307 |
agcacactgcttggtggcatccatgacttttcctgtctttctgtttgcaaataaagtgaactaatgaacatatgaactcagcgtagtcaacgaatagtac |
45345406 |
T |
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| Q |
310 |
gatttccattcctctagtgaaggcacgaagatgtaacaaaaggaacacgagtcatatt |
367 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45345407 |
gatttccattcctctagtgaaggcacgaagatgtaacaaaaggaacacgagtcatatt |
45345464 |
T |
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