View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18757_high_28 (Length: 373)
Name: NF18757_high_28
Description: NF18757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18757_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 9 - 357
Target Start/End: Complemental strand, 45069068 - 45068720
Alignment:
| Q |
9 |
cagaacctgtggtaaataagctactgataattaataattagcccttgaatgctttagcaaccgtatttgtggcttaaattgcaagtaataaagagaaaag |
108 |
Q |
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| T |
45069068 |
cagaacatgtggtaaataagctactgataattaataattagcccttgaatgctttagcaaccgtatttgtggcttaaattgcaagtaataaagagaaaag |
45068969 |
T |
|
| Q |
109 |
aaaggggccacttaaatgattatgtaagaaaaagagaagtcacattgagaagcagaaaatcaatattccttccttgaactaaggtattgccgataagggc |
208 |
Q |
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| T |
45068968 |
aaaggggccacttaaatgattatgtaagaaaaagagaagtcacattgagaagcagaaaatcaatattccttccttgaactaaggtattgccgataagggc |
45068869 |
T |
|
| Q |
209 |
acttcacacacacagtaacccctttcccttccagtgcattgatttgaacaatcaatgcaattggttttggcctcattcatggtgatgattctccacttag |
308 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068868 |
acttcacactcacagtaacccctttcccttccagtgcattgatttgaacaatcaatgcaattggttttggcctcattcatggtgatgattctccacttag |
45068769 |
T |
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| Q |
309 |
aacaagagacaaaacattggcctacaagtagcacgaactcatcactcat |
357 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068768 |
aacaagagacaaaacattggcctacaagtagcacgaactcatcactcat |
45068720 |
T |
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