View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18757_high_39 (Length: 323)
Name: NF18757_high_39
Description: NF18757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18757_high_39 |
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Alignment Details
Target: chr2 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 16 - 306
Target Start/End: Complemental strand, 2921539 - 2921247
Alignment:
| Q |
16 |
attaaaacccgattcatgagaaagtacaattgatagaagcttattctcttgttattctaaacaagggggttgcatttttggaaccacattttgcacaaaa |
115 |
Q |
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| T |
2921539 |
attaaaacccgattcatgagaaagtacaattgatagaagcttattctcttgttattctaaacaagggggttgcatttttggaaccacattttgcacaaaa |
2921440 |
T |
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| Q |
116 |
gaaggaaaattgatcagcaatagaag--gccctaaaatataaagttgtaattcaattttatatgtagtgggaaaagaaaacttagcaagacgctagaaga |
213 |
Q |
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| T |
2921439 |
gaaggaaaattgatcagcaatagaagaggccctaaaatataaagttgtaattcaattttatatgtagtgggaaaagaaaacttagcaagacgctagaaga |
2921340 |
T |
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| Q |
214 |
aaaggaattaaaattggaaatccgaatcatcccactgaagaacagcagaatcaatgttctgctcccttttgagcttgtcttttaggaaccaat |
306 |
Q |
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| T |
2921339 |
aaaagaattaaaattggaaatccgaatcatcccactgaagaacagcagaatcaatgttctgctcccttttgagcttgtcttttaggaaccaat |
2921247 |
T |
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