View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18757_high_58 (Length: 250)

Name: NF18757_high_58
Description: NF18757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18757_high_58
NF18757_high_58
[»] chr3 (50 HSPs)
chr3 (17-242)||(9842793-9843012)
chr3 (76-242)||(9853542-9853708)
chr3 (157-235)||(30257631-30257709)
chr3 (157-235)||(26174120-26174198)
chr3 (157-235)||(40940832-40940910)
chr3 (157-235)||(53424288-53424366)
chr3 (152-217)||(15566629-15566694)
chr3 (137-217)||(25289844-25289919)
chr3 (162-217)||(7470345-7470400)
chr3 (156-219)||(14343416-14343479)
chr3 (157-235)||(26108299-26108377)
chr3 (157-235)||(30807265-30807343)
chr3 (157-235)||(34492687-34492765)
chr3 (157-235)||(35492918-35492996)
chr3 (157-235)||(46576355-46576433)
chr3 (157-235)||(50582999-50583077)
chr3 (163-235)||(7485637-7485709)
chr3 (157-217)||(25379768-25379828)
chr3 (157-217)||(40133579-40133639)
chr3 (157-217)||(45529884-45529944)
chr3 (157-217)||(48977395-48977455)
chr3 (157-220)||(11390609-11390672)
chr3 (157-235)||(8456262-8456340)
chr3 (157-235)||(52821747-52821825)
chr3 (164-217)||(49167070-49167123)
chr3 (157-234)||(52455762-52455839)
chr3 (157-217)||(21362950-21363010)
chr3 (162-217)||(49258392-49258447)
chr3 (162-217)||(53234040-53234095)
chr3 (164-235)||(53288824-53288895)
chr3 (157-235)||(18176999-18177077)
chr3 (178-219)||(29915397-29915438)
chr3 (178-219)||(29964550-29964591)
chr3 (168-217)||(51532807-51532856)
chr3 (157-217)||(4462640-4462700)
chr3 (152-235)||(19857054-19857136)
chr3 (135-234)||(31537951-31538045)
chr3 (162-213)||(36660782-36660833)
chr3 (179-217)||(1692863-1692901)
chr3 (157-235)||(4252508-4252586)
chr3 (157-235)||(45272528-45272606)
chr3 (152-217)||(32151426-32151491)
chr3 (178-217)||(25017543-25017582)
chr3 (168-235)||(26158836-26158903)
chr3 (178-217)||(39041982-39042021)
chr3 (167-217)||(10083949-10083999)
chr3 (167-217)||(10190872-10190922)
chr3 (157-235)||(55371397-55371475)
chr3 (157-234)||(25344170-25344247)
chr3 (168-217)||(34844396-34844445)
[»] chr8 (41 HSPs)
chr8 (157-235)||(27746447-27746525)
chr8 (157-235)||(3734735-3734813)
chr8 (157-235)||(15259518-15259596)
chr8 (157-235)||(28193485-28193563)
chr8 (157-235)||(34237767-34237845)
chr8 (157-217)||(18532118-18532178)
chr8 (156-235)||(21603240-21603319)
chr8 (161-220)||(24018397-24018456)
chr8 (164-235)||(39349274-39349345)
chr8 (157-235)||(4718656-4718734)
chr8 (157-235)||(21667561-21667639)
chr8 (168-217)||(2166721-2166770)
chr8 (163-204)||(9047421-9047462)
chr8 (157-234)||(19471620-19471697)
chr8 (157-234)||(19542544-19542621)
chr8 (157-234)||(19590075-19590152)
chr8 (167-235)||(14632975-14633043)
chr8 (157-217)||(20305919-20305979)
chr8 (157-217)||(21092552-21092612)
chr8 (157-217)||(28964044-28964104)
chr8 (157-235)||(2618197-2618275)
chr8 (167-217)||(4698853-4698903)
chr8 (162-216)||(8042670-8042724)
chr8 (157-235)||(11714931-11715009)
chr8 (157-235)||(32879290-32879368)
chr8 (157-217)||(264529-264589)
chr8 (157-217)||(651332-651392)
chr8 (157-217)||(837067-837127)
chr8 (169-217)||(20469940-20469988)
chr8 (157-217)||(34694706-34694766)
chr8 (157-217)||(42643248-42643308)
chr8 (157-220)||(33585754-33585817)
chr8 (169-235)||(8765638-8765704)
chr8 (157-234)||(7558056-7558133)
chr8 (157-217)||(26168978-26169038)
chr8 (160-216)||(34639337-34639393)
chr8 (157-235)||(42328016-42328093)
chr8 (157-234)||(8387557-8387634)
chr8 (165-217)||(22200690-22200742)
chr8 (163-235)||(28088303-28088375)
chr8 (157-197)||(28908832-28908872)
[»] chr2 (37 HSPs)
chr2 (157-235)||(44946165-44946243)
chr2 (167-217)||(5394034-5394084)
chr2 (157-235)||(15037966-15038044)
chr2 (157-235)||(17324773-17324851)
chr2 (163-217)||(41314005-41314059)
chr2 (157-234)||(11941323-11941400)
chr2 (164-217)||(19849847-19849900)
chr2 (162-235)||(27290600-27290673)
chr2 (163-235)||(10582102-10582174)
chr2 (157-235)||(36390680-36390756)
chr2 (157-235)||(25293173-25293251)
chr2 (157-235)||(33827685-33827763)
chr2 (166-216)||(44610090-44610140)
chr2 (157-234)||(44976267-44976344)
chr2 (157-217)||(6714411-6714471)
chr2 (157-217)||(18976555-18976615)
chr2 (167-214)||(1191530-1191577)
chr2 (162-217)||(4852570-4852625)
chr2 (166-217)||(8258913-8258964)
chr2 (162-217)||(19054037-19054092)
chr2 (157-235)||(30466942-30467020)
chr2 (159-213)||(40997484-40997538)
chr2 (157-234)||(41329850-41329927)
chr2 (157-217)||(8192481-8192541)
chr2 (167-235)||(43374437-43374505)
chr2 (166-217)||(34516538-34516589)
chr2 (157-235)||(4567549-4567627)
chr2 (157-235)||(4618797-4618875)
chr2 (163-217)||(32526215-32526269)
chr2 (157-235)||(32845098-32845176)
chr2 (162-235)||(23787120-23787193)
chr2 (181-217)||(35171831-35171867)
chr2 (162-217)||(19605975-19606030)
chr2 (169-220)||(29361573-29361623)
chr2 (167-217)||(36242442-36242492)
chr2 (157-218)||(14946786-14946847)
chr2 (157-217)||(24196011-24196071)
[»] chr4 (40 HSPs)
chr4 (157-217)||(43719195-43719255)
chr4 (157-235)||(25852221-25852299)
chr4 (157-235)||(52983626-52983704)
chr4 (157-220)||(46714399-46714462)
chr4 (157-235)||(1985843-1985921)
chr4 (152-217)||(35229170-35229235)
chr4 (164-217)||(49287872-49287925)
chr4 (167-235)||(7392075-7392143)
chr4 (163-235)||(27528907-27528979)
chr4 (157-217)||(34844888-34844948)
chr4 (157-213)||(54127476-54127532)
chr4 (162-217)||(33992638-33992693)
chr4 (157-235)||(13873407-13873485)
chr4 (157-235)||(32986204-32986282)
chr4 (157-235)||(33696391-33696469)
chr4 (157-234)||(51535620-51535697)
chr4 (157-217)||(19660662-19660722)
chr4 (157-217)||(22625200-22625260)
chr4 (157-217)||(32942377-32942437)
chr4 (157-217)||(40058982-40059042)
chr4 (168-235)||(20078096-20078163)
chr4 (157-235)||(2351020-2351098)
chr4 (164-217)||(35674871-35674924)
chr4 (157-234)||(41621709-41621786)
chr4 (157-217)||(13584384-13584444)
chr4 (157-217)||(34835536-34835596)
chr4 (162-217)||(12710191-12710246)
chr4 (157-235)||(20566356-20566435)
chr4 (178-235)||(12500170-12500227)
chr4 (157-206)||(55961883-55961932)
chr4 (157-217)||(5609332-5609392)
chr4 (157-217)||(42245753-42245813)
chr4 (157-217)||(43352454-43352514)
chr4 (157-235)||(45787816-45787893)
chr4 (157-210)||(13550215-13550268)
chr4 (168-217)||(20527163-20527212)
chr4 (157-217)||(44343520-44343581)
chr4 (160-193)||(45302849-45302882)
chr4 (157-217)||(9646346-9646406)
chr4 (163-199)||(34722183-34722219)
[»] chr7 (50 HSPs)
chr7 (157-220)||(40332110-40332173)
chr7 (157-235)||(2751282-2751360)
chr7 (157-235)||(27704013-27704091)
chr7 (157-217)||(10091199-10091259)
chr7 (157-235)||(7175974-7176052)
chr7 (157-235)||(7275288-7275366)
chr7 (157-235)||(21217945-21218023)
chr7 (157-235)||(22119899-22119977)
chr7 (157-235)||(40543022-40543100)
chr7 (162-235)||(7799944-7800017)
chr7 (162-235)||(17197062-17197135)
chr7 (157-217)||(2103066-2103126)
chr7 (157-217)||(23854407-23854467)
chr7 (157-216)||(28089827-28089886)
chr7 (157-235)||(11997860-11997938)
chr7 (163-217)||(22703503-22703557)
chr7 (157-219)||(42913641-42913703)
chr7 (162-235)||(21835167-21835240)
chr7 (162-235)||(22299865-22299938)
chr7 (157-217)||(2344310-2344370)
chr7 (157-217)||(18044118-18044178)
chr7 (163-219)||(19421248-19421304)
chr7 (157-217)||(22638303-22638363)
chr7 (138-213)||(17212050-17212120)
chr7 (137-216)||(25333415-25333489)
chr7 (157-220)||(31713022-31713085)
chr7 (157-217)||(9718117-9718177)
chr7 (157-217)||(13332553-13332613)
chr7 (157-217)||(21370608-21370668)
chr7 (157-217)||(27312163-27312223)
chr7 (157-217)||(31197602-31197662)
chr7 (157-216)||(27009370-27009429)
chr7 (154-217)||(37693692-37693755)
chr7 (157-235)||(1469123-1469201)
chr7 (157-235)||(8435807-8435885)
chr7 (157-235)||(22696331-22696409)
chr7 (165-217)||(14199796-14199848)
chr7 (157-217)||(21574233-21574293)
chr7 (163-235)||(37056231-37056303)
chr7 (188-235)||(654816-654863)
chr7 (161-212)||(28003851-28003902)
chr7 (162-217)||(32849607-32849662)
chr7 (166-217)||(43785429-43785480)
chr7 (157-235)||(12211647-12211725)
chr7 (167-217)||(22264632-22264682)
chr7 (178-220)||(36772429-36772471)
chr7 (157-215)||(42031930-42031988)
chr7 (157-210)||(9683837-9683890)
chr7 (164-217)||(23012638-23012691)
chr7 (162-235)||(39145764-39145837)
[»] chr5 (49 HSPs)
chr5 (152-235)||(31288058-31288141)
chr5 (157-235)||(25586939-25587017)
chr5 (157-234)||(13038567-13038644)
chr5 (157-217)||(32059570-32059630)
chr5 (162-234)||(37495059-37495131)
chr5 (162-217)||(1827660-1827715)
chr5 (157-235)||(11926614-11926692)
chr5 (157-234)||(11465020-11465097)
chr5 (163-220)||(15971249-15971306)
chr5 (157-217)||(22392708-22392768)
chr5 (157-217)||(37397720-37397780)
chr5 (162-217)||(15641235-15641290)
chr5 (157-220)||(23270649-23270712)
chr5 (152-235)||(33709613-33709696)
chr5 (157-235)||(8484773-8484851)
chr5 (167-217)||(12398578-12398628)
chr5 (157-235)||(38631073-38631151)
chr5 (157-234)||(13108562-13108639)
chr5 (157-217)||(4603784-4603844)
chr5 (165-217)||(10869695-10869747)
chr5 (169-217)||(18207226-18207274)
chr5 (157-217)||(34049829-34049889)
chr5 (164-235)||(38684222-38684293)
chr5 (136-234)||(34310133-34310226)
chr5 (157-235)||(42193492-42193570)
chr5 (157-218)||(5067308-5067369)
chr5 (167-216)||(19456340-19456389)
chr5 (162-235)||(27498843-27498916)
chr5 (164-217)||(28614614-28614667)
chr5 (157-217)||(36954825-36954885)
chr5 (157-199)||(3715057-3715099)
chr5 (163-217)||(7085756-7085810)
chr5 (167-217)||(30485845-30485895)
chr5 (152-217)||(6014410-6014475)
chr5 (168-217)||(14656645-14656694)
chr5 (162-235)||(26009376-26009449)
chr5 (164-235)||(930596-930668)
chr5 (163-218)||(16616132-16616187)
chr5 (157-208)||(25750750-25750801)
chr5 (157-212)||(27487690-27487745)
chr5 (157-235)||(15931066-15931144)
chr5 (157-235)||(19145523-19145601)
chr5 (163-213)||(40330646-40330696)
chr5 (157-199)||(42006800-42006842)
chr5 (168-217)||(16172985-16173034)
chr5 (169-217)||(43442222-43442271)
chr5 (167-215)||(7151346-7151394)
chr5 (157-209)||(21042663-21042715)
chr5 (168-196)||(32007772-32007800)
[»] scaffold0576 (1 HSPs)
scaffold0576 (157-235)||(5194-5272)
[»] chr6 (27 HSPs)
chr6 (157-235)||(15360210-15360288)
chr6 (161-217)||(11007176-11007232)
chr6 (157-217)||(12591644-12591704)
chr6 (157-235)||(9238982-9239060)
chr6 (157-217)||(11448878-11448938)
chr6 (157-220)||(9843945-9844008)
chr6 (161-235)||(9208263-9208337)
chr6 (154-235)||(654258-654339)
chr6 (162-219)||(9690766-9690823)
chr6 (157-217)||(22576074-22576134)
chr6 (157-217)||(33718588-33718648)
chr6 (157-235)||(21982432-21982510)
chr6 (157-235)||(34147353-34147431)
chr6 (157-235)||(34159969-34160047)
chr6 (157-213)||(13753247-13753303)
chr6 (178-234)||(14212920-14212976)
chr6 (157-217)||(28672074-28672134)
chr6 (166-217)||(17149586-17149637)
chr6 (162-235)||(1344949-1345020)
chr6 (157-235)||(3222747-3222824)
chr6 (174-218)||(3433602-3433646)
chr6 (165-217)||(5360201-5360253)
chr6 (165-213)||(33499489-33499537)
chr6 (167-217)||(28968172-28968222)
chr6 (160-217)||(17081184-17081241)
chr6 (165-217)||(17706437-17706489)
chr6 (157-217)||(21148640-21148700)
[»] scaffold0049 (1 HSPs)
scaffold0049 (157-217)||(66769-66829)
[»] chr1 (47 HSPs)
chr1 (157-217)||(27454996-27455056)
chr1 (157-217)||(29057467-29057527)
chr1 (157-217)||(46113532-46113592)
chr1 (157-235)||(4621349-4621427)
chr1 (157-235)||(7197358-7197436)
chr1 (157-235)||(24674400-24674478)
chr1 (157-235)||(46607817-46607895)
chr1 (162-235)||(30677188-30677261)
chr1 (157-217)||(8077654-8077714)
chr1 (162-235)||(7578421-7578494)
chr1 (162-235)||(7946856-7946929)
chr1 (162-235)||(21726741-21726814)
chr1 (157-217)||(7766857-7766917)
chr1 (157-217)||(15059532-15059592)
chr1 (139-235)||(20487302-20487393)
chr1 (163-235)||(24122036-24122108)
chr1 (157-217)||(34778349-34778409)
chr1 (165-217)||(37351591-37351643)
chr1 (157-235)||(168208-168286)
chr1 (163-217)||(17935782-17935836)
chr1 (167-217)||(33905640-33905690)
chr1 (157-218)||(1378752-1378813)
chr1 (163-220)||(1378911-1378968)
chr1 (164-217)||(19034516-19034569)
chr1 (134-235)||(23734105-23734201)
chr1 (134-235)||(23741297-23741393)
chr1 (162-235)||(24216990-24217063)
chr1 (163-219)||(8779864-8779920)
chr1 (162-217)||(18646865-18646920)
chr1 (172-235)||(36156000-36156063)
chr1 (168-235)||(45859155-45859222)
chr1 (152-202)||(6776146-6776196)
chr1 (157-235)||(32729552-32729630)
chr1 (162-220)||(32930761-32930819)
chr1 (162-215)||(1138591-1138644)
chr1 (165-217)||(809237-809289)
chr1 (169-217)||(9500485-9500533)
chr1 (157-217)||(14258557-14258617)
chr1 (157-217)||(25237119-25237179)
chr1 (157-217)||(52135137-52135197)
chr1 (157-220)||(37349530-37349593)
chr1 (162-235)||(1486432-1486503)
chr1 (157-235)||(2272351-2272429)
chr1 (162-212)||(10059067-10059117)
chr1 (157-195)||(47091697-47091735)
chr1 (157-195)||(52592567-52592605)
chr1 (157-217)||(23232395-23232455)
[»] scaffold0459 (1 HSPs)
scaffold0459 (157-220)||(10820-10883)
[»] scaffold0366 (2 HSPs)
scaffold0366 (157-220)||(12127-12190)
scaffold0366 (157-217)||(9429-9489)
[»] scaffold0026 (1 HSPs)
scaffold0026 (157-235)||(97478-97556)
[»] scaffold0623 (1 HSPs)
scaffold0623 (157-217)||(1186-1246)
[»] scaffold0199 (1 HSPs)
scaffold0199 (157-217)||(8537-8597)
[»] scaffold0028 (1 HSPs)
scaffold0028 (157-234)||(27783-27860)
[»] scaffold0717 (1 HSPs)
scaffold0717 (157-217)||(88-148)
[»] scaffold0460 (1 HSPs)
scaffold0460 (139-235)||(8291-8382)
[»] scaffold0068 (1 HSPs)
scaffold0068 (157-217)||(41774-41834)
[»] scaffold0070 (1 HSPs)
scaffold0070 (157-235)||(40332-40410)
[»] scaffold0051 (1 HSPs)
scaffold0051 (157-235)||(52983-53061)
[»] scaffold0019 (1 HSPs)
scaffold0019 (169-235)||(161828-161894)
[»] scaffold0328 (1 HSPs)
scaffold0328 (157-213)||(14998-15054)
[»] scaffold0217 (1 HSPs)
scaffold0217 (157-217)||(7439-7499)
[»] scaffold0157 (1 HSPs)
scaffold0157 (178-235)||(20250-20307)
[»] scaffold0240 (1 HSPs)
scaffold0240 (157-217)||(12884-12944)


Alignment Details
Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 9842793 - 9843012
Alignment:
Q  17 cgcataatctcctgtatattaattatattatcgtaaaccttatgagtaatatatctcatcagaatctgtatgaaagagaagatatatctgcactaaatca 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9842793 cgcataatctcctgtatattaattatattatcgtaaaccttatgagtaatatatctcatcagaatctgtatgaaagagaagatatatctgcactaaatca 9842892  T
Q  117 tgctttaatattcaggagtttaaacccatttggggttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgat 216  Q
    |||||||||||||||||||||||||||||||||||     |||||||||||||||||||| ||||||||||||| |||||||| ||||||| | ||||||    
T  9842893 tgctttaatattcaggagtttaaacccatttgggg-----ttggtctagtggttggtttgggatcttggagttttctcctccagaggtctc-gattcgat 9842986  T
Q  217 ttccattgctgccaatttcctatgtt 242  Q
    | ||| || || ||||||| ||||||    
T  9842987 tcccactggtgtcaatttcgtatgtt 9843012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 76 - 242
Target Start/End: Original strand, 9853542 - 9853708
Alignment:
Q  76 cagaatctgtatgaaagagaagatatatctgcactaaatcatgctttaatattcaggagtttaaacccatttggggttggtttggtctagtggttggttt 175  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9853542 cagaatctgtatgaaagagaagatatatctgcactgaatcatgctttaatattcaggagtttaaacccatttggggttggtttggtctagtggttagttt 9853641  T
Q  176 gagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttcctatgtt 242  Q
    | |||||||||||||||||||||||||||||||||||||||| |||  | |||||||||| ||||||    
T  9853642 gggatcttggagtttgctcctccaaaggtctcaggttcgattcccaccggtgccaatttcgtatgtt 9853708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 30257631 - 30257709
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||    
T  30257631 ttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttc 30257709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 26174120 - 26174198
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||  || ||||||||||    
T  26174120 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttc 26174198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 40940832 - 40940910
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  40940832 ttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 40940910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 53424366 - 53424288
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| || ||| ||||||||||    
T  53424366 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttc 53424288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 15566694 - 15566629
Alignment:
Q  152 ttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| |||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  15566694 ttgggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgatt 15566629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 25289919 - 25289844
Alignment:
Q  137 taaacccatttggggttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||||||     ||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  25289919 taaacccatttggggt-----tggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 25289844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 7470400 - 7470345
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  7470400 ctagtggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 7470345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 14343479 - 14343416
Alignment:
Q  156 tttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttc 219  Q
    ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||||||||    
T  14343479 tttggtctattggttggtttgagatcttggagtttgctcctccagatgtctcagattcgatttc 14343416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 26108299 - 26108377
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  26108299 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 26108377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 30807343 - 30807265
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  30807343 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 30807265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 34492765 - 34492687
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||| ||  |||||||||||||    
T  34492765 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgctgccaatttc 34492687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 35492918 - 35492996
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  35492918 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 35492996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 46576355 - 46576433
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  46576355 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 46576433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 50582999 - 50583077
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||||  || ||||||||||    
T  50582999 ttggcctagtggttggtttgggatcttggagtttgctcctcttaaggtttcaggttcgatttcctctgttgccaatttc 50583077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 7485709 - 7485637
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||    
T  7485709 tagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttc 7485637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 25379768 - 25379828
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  25379768 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 25379828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 40133639 - 40133579
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||    
T  40133639 ttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgatt 40133579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 45529944 - 45529884
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  45529944 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 45529884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 48977395 - 48977455
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  48977395 ttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgatt 48977455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 11390609 - 11390672
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||||    
T  11390609 ttggcctagtggttggtttgagatcttggagttttctcctccaaagatttcaggtttgatttcc 11390672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 8456340 - 8456262
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  8456340 ttggcctagtggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 8456262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 52821825 - 52821747
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||  ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  52821825 ttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 52821747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 49167070 - 49167123
Alignment:
Q  164 agtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||    
T  49167070 agtggttggcttgagatcttggagtttgctcctccaaagatatcaggttcgatt 49167123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 52455839 - 52455762
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| ||||||||||| | | |||||||||||||||||||||| ||||||||||||||||| ||  || |||||||||    
T  52455839 ttggcctagtggttggctagggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 52455762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 21362950 - 21363010
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||  ||| |||||||||||||||||||||| |||||||||||||||||    
T  21362950 ttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 21363010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 49258447 - 49258392
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||| ||| ||||||| |||||||||||||| |||||||||||||||||    
T  49258447 ctagtggttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgatt 49258392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 53234095 - 53234040
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||| ||| |||||||||||||||||||||| | |||||||||||||||    
T  53234095 ctagtggttggcttgggatcttggagtttgctcctccagaagtctcaggttcgatt 53234040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 53288895 - 53288824
Alignment:
Q  164 agtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||| |||||| ||  || ||||||||||    
T  53288895 agtggttggtttgggatattagagtttgctcctccaaaggtctcaggctcgattccctctggtgccaatttc 53288824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 18177077 - 18176999
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||  ||||||||||||||||||||| |||| |||| |||||||||||| ||  || ||||||||||    
T  18177077 ttggcctagtggttgacttgagatcttggagtttgctcttccagaggtatcaggttcgattccctctggtgccaatttc 18176999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 29915438 - 29915397
Alignment:
Q  178 gatcttggagtttgctcctccaaaggtctcaggttcgatttc 219  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  29915438 gatcttggagtttgctcctccagaggtctcaggttcgatttc 29915397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 29964591 - 29964550
Alignment:
Q  178 gatcttggagtttgctcctccaaaggtctcaggttcgatttc 219  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  29964591 gatcttggagtttgctcctccagaggtctcaggttcgatttc 29964550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 51532807 - 51532856
Alignment:
Q  168 gttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  51532807 gttggtttgagattttggagtttgcttctccaaaggtctcatgttcgatt 51532856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 4462640 - 4462700
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| |||||||||||||||||||| || |||| |||||| ||||||||    
T  4462640 ttggcctagtggttggcttgagatcttggagtttgctacttcaaaagtctcatgttcgatt 4462700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 19857054 - 19857136
Alignment:
Q  152 ttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| |||| || |||||||| ||| |||||||||||||||||||||| | ||||||||||||||| || ||| || |||||||    
T  19857054 ttgggttggcctggtggttggcttg-gatcttggagtttgctcctccagatgtctcaggttcgattccctttggtgtcaatttc 19857136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 31538045 - 31537951
Alignment:
Q  135 tttaaacccatttggggttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||||||||||||||||||||      ||||||||||| ||  |||||||||||||||||||||| |||||||| ||| |||| ||  || |||||||||    
T  31538045 tttaaacccatttggggttggc-----ctagtggttggcttaggatcttggagtttgctcctccagaggtctcatgtttgattccctctggtgccaattt 31537951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 36660782 - 36660833
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttc 213  Q
    ||||||||||||||  ||||||||||||||||||||  ||||||||||||||    
T  36660782 ctagtggttggtttaggatcttggagtttgctcctctcaaggtctcaggttc 36660833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 1692863 - 1692901
Alignment:
Q  179 atcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  1692863 atcttggagtttgctcctccagaggtctcaggttcgatt 1692901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 4252586 - 4252508
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||||||||||||||| ||||||||  ||||||||| ||| |||| ||  || ||||||||||    
T  4252586 ttggcctagtggttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccctctggtgccaatttc 4252508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 45272606 - 45272528
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||| ||||| ||| |||||||||||||||||||||| | ||||||| ||||||| ||  || ||||||||||    
T  45272606 ttggcctagtcgttggcttgggatcttggagtttgctcctccagatgtctcagtttcgattccctctggtgccaatttc 45272528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 32151426 - 32151491
Alignment:
Q  152 ttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| |||| ||||||||||  ||| ||||||||||||||||||||||||||| |||  |||||||    
T  32151426 ttgggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgatt 32151491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 25017543 - 25017582
Alignment:
Q  178 gatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  25017543 gatcttggagtttgctcctccaaagatcttaggttcgatt 25017582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 26158836 - 26158903
Alignment:
Q  168 gttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||| ||||||||||||||| ||||||||  |||||||||||||  ||| || ||| ||||||||||    
T  26158836 gttggcttgagatcttggagtgtgctcctctcaaggtctcaggtttcattccctttggtgccaatttc 26158903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 39042021 - 39041982
Alignment:
Q  178 gatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  39042021 gatcttggagtttgctcctccagaggtctcaagttcgatt 39041982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 10083999 - 10083949
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||| ||| |||||||||||||||||||||| ||| |||||||| ||||    
T  10083999 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgatt 10083949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 10190922 - 10190872
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||| ||| |||||||||||||||||||||| ||| |||||||| ||||    
T  10190922 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgatt 10190872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 55371475 - 55371397
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| ||| ||||||| |||| |||  ||||||||| |||||||| || ||| ||||||||||    
T  55371475 ttggcctagtggttggcttgcgattttggagtatgcttctctcaaggtctcatgttcgattccctttggtgccaatttc 55371397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 25344247 - 25344170
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| ||||||||||  ||| |||||| ||||||||||||||| || ||||||||| |||| || ||| || ||||||    
T  25344247 ttggcctagtggttgacttgggatcttcgagtttgctcctccagagatctcaggtttgattccctttggtgtcaattt 25344170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 34844396 - 34844445
Alignment:
Q  168 gttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||| |||||| |||||||| ||||||||  ||||||||||||||||||    
T  34844396 gttggcttgagaccttggagtgtgctcctctcaaggtctcaggttcgatt 34844445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 27746525 - 27746447
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||    
T  27746525 ttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttc 27746447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 3734813 - 3734735
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||    
T  3734813 ttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttc 3734735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 15259596 - 15259518
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  15259596 ttggtctagtggttggtttgggatcttggattttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 15259518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 28193485 - 28193563
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  28193485 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 28193563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 34237845 - 34237767
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  34237845 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 34237767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 18532118 - 18532178
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  18532118 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 18532178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 21603240 - 21603319
Alignment:
Q  156 tttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||| ||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  21603240 tttggcctagtggttggcttgggatcttagagtttgctcctccagaggtctcaggttcgattccctatggtgccaatttc 21603319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 24018397 - 24018456
Alignment:
Q  161 tctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||||||||||  ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  24018397 tctagtggttgacttgggatcttggagtttgctcctccaaaggtctgaggttcgatttcc 24018456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 39349274 - 39349345
Alignment:
Q  164 agtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  39349274 agtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 39349345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 4718656 - 4718734
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| ||||||||||||||||||| || ||||||||||||||||| ||  || ||||||||||    
T  4718656 ttggcctagtggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttc 4718734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 21667561 - 21667639
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||||||||| |||  ||||||||| |||||||||||||| | ||||||||||||||| ||| ||| ||||||    
T  21667561 ttggtctagtggttggcttggaatcttggaggttgctcctccaaagatttcaggttcgatttcctttggtgctaatttc 21667639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 2166721 - 2166770
Alignment:
Q  168 gttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  2166721 gttggtttgggatcttggagtttgcttctccaaaggtctcaggttcgatt 2166770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 9047462 - 9047421
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9047462 tagtggttggtttgagatcttggagtttgctcctccaaaggt 9047421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 19471620 - 19471697
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||| |||| ||  || |||||||||    
T  19471620 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattt 19471697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 19542544 - 19542621
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||| |||| ||  || |||||||||    
T  19542544 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattt 19542621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 19590152 - 19590075
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||| |||| ||  || |||||||||    
T  19590152 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaattt 19590075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 14632975 - 14633043
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  14632975 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 14633043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 20305919 - 20305979
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||    
T  20305919 ttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgatt 20305979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 21092552 - 21092612
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||    
T  21092552 ttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgatt 21092612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 28964044 - 28964104
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||| ||| ||||||||    
T  28964044 ttggtctagtggttggtttgagatcttagagtttgctcctcttaaggtttcatgttcgatt 28964104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 2618197 - 2618275
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||  ||||||||| ||  || ||||||||||    
T  2618197 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcttgggttcgattccctctggtgccaatttc 2618275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 4698903 - 4698853
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||||||    
T  4698903 ggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgatt 4698853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 8042670 - 8042724
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgat 216  Q
    |||||| |||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  8042670 ctagtgcttggcttgggatcttggagtttgctcctccaaaagtctcaggttcgat 8042724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 11715009 - 11714931
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| |||||||||||||||||||||||||||||||| |||  ||| | |||||||||||| ||  || ||||||||||    
T  11715009 ttggcctagtggttggtttgagatcttggagtttgcttctctcaagatttcaggttcgattccccctgatgccaatttc 11714931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 32879290 - 32879368
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||||||||  ||| |||||| ||||||| ||||||| ||||||||||||||||| ||  || ||||||||||    
T  32879290 ttggtctagtggttgacttgggatcttcgagtttggtcctccagaggtctcaggttcgattccctctggtgccaatttc 32879368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 264589 - 264529
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||| ||||||||||||||| || ||||||||||||||    
T  264589 ttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgatt 264529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 651332 - 651392
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||| ||||||||||||||| || ||||||||||||||    
T  651332 ttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgatt 651392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 837067 - 837127
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||| ||||||||||||||| || ||||||||||||||    
T  837067 ttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgatt 837127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 20469940 - 20469988
Alignment:
Q  169 ttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  20469940 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 20469988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 34694766 - 34694706
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||||  ||| ||||||||||||||||||||  ||||||| ||||||||||    
T  34694766 ttggtctagtggttgacttgtgatcttggagtttgctcctctcaaggtcttaggttcgatt 34694706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 42643308 - 42643248
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||  ||| |||||||||||||||||||||| ||||||||| |||||||    
T  42643308 ttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcagattcgatt 42643248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 33585817 - 33585754
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||| |||||||||||||||||||||| |||| ||||||||  || || |||||||||||||||    
T  33585817 ttggcctagtggttggtttgagatcttagagtgtgctcctctcaaagtttcaggttcgatttcc 33585754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 8765704 - 8765638
Alignment:
Q  169 ttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| |||||||||||||||||||||| ||| || |||||||||||||| ||  || ||||||||||    
T  8765704 ttggcttgagatcttggagtttgctcccccagagatctcaggttcgattccctctggtgccaatttc 8765638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 7558133 - 7558056
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| ||||| ||| | ||| |||||||||||||||||||||| | ||||||| ||||||||||  || |||||||||    
T  7558133 ttggcctagtagttagcttgggatcttggagtttgctcctccagaagtctcagattcgatttcctctggtgccaattt 7558056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 26169038 - 26168978
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||| | ||| ||||||||||||||||||||  ||||||||||||| ||||    
T  26169038 ttggcctagtggtttgcttgggatcttggagtttgctcctctcaaggtctcaggtttgatt 26168978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 34639393 - 34639337
Alignment:
Q  160 gtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgat 216  Q
    ||||||||||||| ||| ||||||||||| ||||||||  ||||||||||| |||||    
T  34639393 gtctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggctcgat 34639337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 42328016 - 42328093
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| ||||||||||||| |||||||| |||| ||||||| |||| ||  || ||||||||||    
T  42328016 ttggcctagtggttggcttgggatcttggagttt-ctcctccagaggtgtcaggtttgattccctctgttgccaatttc 42328093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 8387634 - 8387557
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| ||||||||||  |||||||||| ||||||||| |||  | ||||||| |||||||||||  || |||||||||    
T  8387634 ttggcctagtggttgtcttgagatcttagagtttgcttctctcagggtctcaagttcgatttcctctggtgccaattt 8387557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 22200742 - 22200690
Alignment:
Q  165 gtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||| ||||||||||||| || |||  || |||||||||||||||    
T  22200742 gtggttggtttgggatcttggagtttacttctctcaaagtctcaggttcgatt 22200690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 28088303 - 28088375
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||  ||| |||||||||||||| || |||| ||||||||| ||||||| || ||| || |||||||    
T  28088303 tagtggttgacttgggatcttggagtttgttcatccagaggtctcagattcgattccctttggtgtcaatttc 28088375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 28908832 - 28908872
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctc 197  Q
    ||||||||||||||||||||  || ||||||||||||||||    
T  28908832 ttggtctagtggttggtttggaattttggagtttgctcctc 28908872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 44946243 - 44946165
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| || ||| ||||||||||    
T  44946243 ttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttc 44946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 5394034 - 5394084
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5394034 ggttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 5394084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 15037966 - 15038044
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||  | | |||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||    
T  15037966 ttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttc 15038044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 17324773 - 17324851
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| |||||||||||||||  ||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  17324773 ttggcctagtggttggtttggtatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 17324851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 41314005 - 41314059
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  41314005 tagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgatt 41314059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 11941400 - 11941323
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||| ||  || |||||||||    
T  11941400 ttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctatggtgccaattt 11941323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 19849847 - 19849900
Alignment:
Q  164 agtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  19849847 agtggttggtttgagatcttggagtttgctcctccaaaggtcttaagttcgatt 19849900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 27290600 - 27290673
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| || | | ||||||||||    
T  27290600 ctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcccttcggtgccaatttc 27290673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 10582174 - 10582102
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  10582174 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 10582102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 36390756 - 36390680
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||||||| |||||  ||||||||| ||||||||||||||||||||||||||  || ||||||||||    
T  36390756 ttggcctagtggttggtttgggatct--gagtttgcttctccaaaggtctcaggttcgatttcctctggtgccaatttc 36390680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 25293173 - 25293251
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||||||||  ||| |||||||||||||||||||| | ||||||||||||||||| ||  || ||||||||||    
T  25293173 ttggtctagtggttgacttgggatcttggagtttgctcctcgagaggtctcaggttcgattccctctggtgccaatttc 25293251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 33827763 - 33827685
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||| ||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  33827763 ttggcctagtggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccctctggtgccaatttc 33827685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 44610090 - 44610140
Alignment:
Q  166 tggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgat 216  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  44610090 tggttggcttgagatcttggagtttgctcttccaaaggtctcaggttcgat 44610140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 44976344 - 44976267
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| ||||||||||| ||| |||||||| ||||||||||||| ||||||||||||||||| ||  || |||||||||    
T  44976344 ttggcctagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 44976267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 6714471 - 6714411
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||| ||||||| |||||||||||||||||||||||||| |||||||||||| ||||    
T  6714471 ttggcctaatggttggcttgagatcttggagtttgctcctccagaggtctcaggtttgatt 6714411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 18976615 - 18976555
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||| ||||||||    
T  18976615 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgatt 18976555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 1191530 - 1191577
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcg 214  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||    
T  1191530 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcg 1191577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 4852570 - 4852625
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||  |||  |||||||||||||||||||||||||||||||||||||||    
T  4852570 ctagtggttgacttggaatcttggagtttgctcctccaaaggtctcaggttcgatt 4852625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 8258913 - 8258964
Alignment:
Q  166 tggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||| |||||||||||||||||||||||||||| | |||||||||||||||    
T  8258913 tggttagtttgagatcttggagtttgctcctccagatgtctcaggttcgatt 8258964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 19054037 - 19054092
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||    
T  19054037 ctagtgattggcttgagatcttggagtctgctcctccaaaggtctcaggtttgatt 19054092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 30467020 - 30466942
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||||||| ||| |||||||||| ||||| | |||||||||||||||||  |  |||||||||||||    
T  30467020 ttggcctagtggttggtttgggatattggagtttgttcctctagaggtctcaggttcgattctctctgctgccaatttc 30466942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 40997538 - 40997484
Alignment:
Q  159 ggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttc 213  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||| ||||    
T  40997538 ggtctagtggttgacttgggatcttggagtttgctcctccaaaggtctcatgttc 40997484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 41329850 - 41329927
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| ||||||||| ||||| |||||| |||||||||||||||||||| |||| ||||||| ||  || |||||||||    
T  41329850 ttggcctagtggttagtttgggatcttagagtttgctcctccaaaggtttcagattcgattccctctggtgccaattt 41329927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 8192541 - 8192481
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| ||||||||||| ||||||||  ||||||||||||||||||    
T  8192541 ttggcctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgatt 8192481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 43374505 - 43374437
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||| ||| ||||||||||||||||||| || ||||||||||||||||| ||  || ||||||||||    
T  43374505 ggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttc 43374437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 34516589 - 34516538
Alignment:
Q  166 tggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||| ||| |||||||||||||||||||||| |||| ||||||||||||    
T  34516589 tggttggcttgggatcttggagtttgctcctccagaggtttcaggttcgatt 34516538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 4567627 - 4567549
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||| ||||| ||| ||||||| ||||||||||| || | ||||||||||||||||||  || ||||||||||    
T  4567627 ttggcctagtagttggcttgggatcttgaagtttgctccttcagaagtctcaggttcgatttcctctggtgccaatttc 4567549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 4618875 - 4618797
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| |||  |||||||||| ||||||||  ||||| |||||||||||||||  || ||||||||||    
T  4618875 ttggcctagtggttggcttggaatcttggagtatgctcctctcaaggtttcaggttcgatttcccctggtgccaatttc 4618797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 32526269 - 32526215
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||| |||| ||||||| ||||||||||||  ||||||||||||||||||    
T  32526269 tagtggttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgatt 32526215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 32845098 - 32845176
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||| ||| | ||| |||||||||||||||||||||||| || |||||||||||| ||  || ||||||||||    
T  32845098 ttggcctagtagttagcttgggatcttggagtttgctcctccaaaagtttcaggttcgattccctctggtgccaatttc 32845176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 23787193 - 23787120
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||||||||| || ||||| |||||| || ||||||||||||||| |||| ||  || ||||||||||    
T  23787193 ctagtggttggtttgaaattttggaatttgcttctacaaaggtctcaggtttgattccctctggtgccaatttc 23787120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 35171831 - 35171867
Alignment:
Q  181 cttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35171831 cttggagtttgctcctccagaggtctcaggttcgatt 35171867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 19606030 - 19605975
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||| ||| |||||||||||  |||||||  ||||||||||||||||||    
T  19606030 ctagtggttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgatt 19605975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 29361573 - 29361623
Alignment:
Q  169 ttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||| ||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  29361573 ttggattgggatcttggagtttgctcctccaaagatctcagg-tcgatttcc 29361623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 36242492 - 36242442
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||| ||| ||||||| | |||||||||||| |||||||||||||||||    
T  36242492 ggttggcttgggatcttgaaatttgctcctccagaggtctcaggttcgatt 36242442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 14946786 - 14946847
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgattt 218  Q
    |||| ||||||||||  ||||||||||| ||||||||||||  ||||| | |||||||||||    
T  14946786 ttggcctagtggttgacttgagatcttgaagtttgctcctctcaaggttttaggttcgattt 14946847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 24196011 - 24196071
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| ||| |||| ||| ||||||||| |||| ||||||||||||    
T  24196011 ttggcctagtggttggcttgggattttggggttcgctcctccagaggtttcaggttcgatt 24196071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 43719255 - 43719195
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  43719255 ttggtctagtggttggtttgagatcttggagtttgctcctccagaggtttcaggttcgatt 43719195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 25852221 - 25852299
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||    
T  25852221 ttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttc 25852299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 52983626 - 52983704
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  52983626 ttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 52983704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 46714399 - 46714462
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||    
T  46714399 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcc 46714462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 1985843 - 1985921
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| || ||| ||| ||||||    
T  1985843 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgcgaatttc 1985921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 35229170 - 35229235
Alignment:
Q  152 ttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  35229170 ttgggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 35229235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 49287872 - 49287925
Alignment:
Q  164 agtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  49287872 agtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgatt 49287925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 7392143 - 7392075
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||    
T  7392143 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgccaatttc 7392075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 27528979 - 27528907
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  27528979 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 27528907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 34844948 - 34844888
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||| | |||||||||||||||||||||||||| |||||||||||||||||    
T  34844948 ttggcctagtggtttgcttgagatcttggagtttgctcctccagaggtctcaggttcgatt 34844888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 54127532 - 54127476
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttc 213  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  54127532 ttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttc 54127476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 33992638 - 33992693
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||    
T  33992638 ctagtggttggtttgggatcttggagtttgctcctccagaggtcttaggttcgatt 33992693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 13873485 - 13873407
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||| | ||| ||||||||||||||||||| |||||||||||||||||||| ||  || ||||||||||    
T  13873485 ttggcctagtggtttgcttgggatcttggagtttgctccttcaaaggtctcaggttcgattccctctggtgccaatttc 13873407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 32986204 - 32986282
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||| ||  || ||||||||||    
T  32986204 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttc 32986282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 33696469 - 33696391
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||| ||  || ||||||||||    
T  33696469 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttc 33696391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 51535620 - 51535697
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| ||||||||||  ||| |||||||||||||||||||||| ||||||||||||||||| ||  || |||||||||    
T  51535620 ttggcctagtggttgacttgggatcttggagtttgctcctccacaggtctcaggttcgattccctctggtgccaattt 51535697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 19660722 - 19660662
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||| ||||    
T  19660722 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgatt 19660662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 22625260 - 22625200
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||    
T  22625260 ttggcctagtggttggcttgggatcttggagtttactcctccagaggtctcaggttcgatt 22625200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 32942377 - 32942437
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||||| ||||||||||||||||| |||||||| |||| | ||||||||||    
T  32942377 ttggtctagtggttggcttgagatcttggagtttactcctccagaggtttaaggttcgatt 32942437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 40059042 - 40058982
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||| | |||||||||||||||||    
T  40059042 ttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 40058982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 20078163 - 20078096
Alignment:
Q  168 gttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||| ||| |||||||||||||||||||||| |||||||||||| |||| ||| || ||||||||||    
T  20078163 gttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattcccactggtgccaatttc 20078096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 2351020 - 2351098
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| |||  |||||| |||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  2351020 ttggcctagtggttggcttggaatcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 2351098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 35674924 - 35674871
Alignment:
Q  164 agtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||| ||| ||||||||||||||||| |||||||||| |||||||||||    
T  35674924 agtggttggcttgggatcttggagtttgctcttccaaaggtcacaggttcgatt 35674871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 41621786 - 41621709
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| ||| ||||||| ||||||||||||||||||||||||  ||||||||| ||| |||||||  || |||||||||    
T  41621786 ttggcctaatggttggcttgagatcttggagtttgctcctctcaaggtctcatgtttgatttcctctggtgccaattt 41621709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 13584444 - 13584384
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| |||||||||||  |||||| |||||||||||||||||||| |||||| ||||||||    
T  13584444 ttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgatt 13584384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 34835536 - 34835596
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||||| ||| |||||| |||||||||||||  ||||||||| ||||||||    
T  34835536 ttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 34835596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 12710191 - 12710246
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||||| ||||||||||| |||| |||  ||||||||||||||||||    
T  12710191 ctagtggttggtttgggatcttggagtatgcttctcttaaggtctcaggttcgatt 12710246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 20566356 - 20566435
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggt-ctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||  |||||||||||| ||  || ||||||||||    
T  20566356 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtgatcaggttcgattccctctggtgccaatttc 20566435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 12500227 - 12500170
Alignment:
Q  178 gatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||  || ||||||||||    
T  12500227 gatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttc 12500170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 55961932 - 55961883
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtct 206  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||    
T  55961932 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtct 55961883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 5609392 - 5609332
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| ||||||||||||||||| | ||  ||||||||||||||||    
T  5609392 ttggcctagtggttggcttgggatcttggagtttgctcattcagtggtctcaggttcgatt 5609332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 42245753 - 42245813
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||  ||| |||||| ||||||||||||| ||||||||| |||||||||    
T  42245753 ttggcctagtggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgatt 42245813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 43352514 - 43352454
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||| ||||||| |||||||| |||||||||||||||  |||  |||||||||||||    
T  43352514 ttggtctaatggttggcttgagatcatggagtttgctcctctcaagaactcaggttcgatt 43352454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 45787893 - 45787816
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| |||  |||||||| |||||||||||| || |||||||||||||| ||  || ||||||||||    
T  45787893 ttggcctagtggttggcttggaatcttgga-tttgctcctccagagatctcaggttcgattccctctgatgccaatttc 45787816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 13550215 - 13550268
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcagg 210  Q
    |||| ||||||||||  ||||||||| |||||||||||||| | ||||||||||    
T  13550215 ttggcctagtggttgacttgagatctgggagtttgctcctctagaggtctcagg 13550268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 20527212 - 20527163
Alignment:
Q  168 gttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||| |||||||||| ||||||| |||||||| ||| ||||    
T  20527212 gttggtttgagattttggagtttgttcctccagaggtctcaagtttgatt 20527163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 44343520 - 44343581
Alignment:
Q  157 ttggtctagtggtt-ggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||| || ||| |||||||||||||||||| ||||||| |||| ||||||||    
T  44343520 ttgggctagtggtttggcttgggatcttggagtttgctcccccaaaggactcaagttcgatt 44343581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 45302849 - 45302882
Alignment:
Q  160 gtctagtggttggtttgagatcttggagtttgct 193  Q
    ||||| ||||||||||||||||||||||||||||    
T  45302849 gtctaatggttggtttgagatcttggagtttgct 45302882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 9646406 - 9646346
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||||||||| |||||| |||| |||||||   ||||||||| ||| ||||    
T  9646406 ttggtctagtggttggtttgggatctttgagtgtgctcctgtcaaggtctcatgtttgatt 9646346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 34722183 - 34722219
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctcca 199  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  34722183 tagtggttggcttgggatcttggagtttgctcctcca 34722219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 40332110 - 40332173
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  40332110 ttggtctagtggttggcttgaaatcttggagtttgctcctctaaaggtctcaggttcgatttcc 40332173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 2751282 - 2751360
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||    
T  2751282 ttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttc 2751360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 27704013 - 27704091
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||| ||||||||| ||||||||||| ||||||||||| || |||||||||||||||||||| ||| ||||||||||    
T  27704013 ttggtccagtggttggcttgagatcttgaagtttgctcctacagaggtctcaggttcgatttcctttggtgccaatttc 27704091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 10091199 - 10091259
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  10091199 ttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 10091259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 7176052 - 7175974
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  7176052 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 7175974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 7275288 - 7275366
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  7275288 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 7275366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 21218023 - 21217945
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  21218023 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttc 21217945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 22119899 - 22119977
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  22119899 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 22119977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 40543100 - 40543022
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  40543100 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 40543022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 7800017 - 7799944
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  7800017 ctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 7799944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 17197135 - 17197062
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||| |||||||| ||  || ||||||||||    
T  17197135 ctagtggttggtttgcgatcttggagtttgctcctccataggtctcaagttcgattccctctggtgccaatttc 17197062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 2103066 - 2103126
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  2103066 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 2103126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 23854407 - 23854467
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  23854407 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 23854467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 28089827 - 28089886
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgat 216  Q
    |||| ||||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  28089827 ttggcctagtggttggcttgagatcttggagtttgctcctccagatgtctcaggttcgat 28089886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 11997860 - 11997938
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||| ||  || ||||||||||    
T  11997860 ttgggctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttc 11997938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 22703503 - 22703557
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  22703503 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 22703557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 42913703 - 42913641
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttc 219  Q
    |||| ||||||||||| ||| |||||||||||||||||||| | |||||||||||||||||||    
T  42913703 ttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttc 42913641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 21835167 - 21835240
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||| ||| |||||||||||||||||||||| || |||||||||||||| ||  || ||||||||||    
T  21835167 ctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaatttc 21835240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 22299865 - 22299938
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||| ||  || ||||||||||    
T  22299865 ctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttc 22299938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 2344310 - 2344370
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||| |||||| |||||||    
T  2344310 ttggcctagtggttggcttgggatcttggagtttgctcctccaaagctctcagattcgatt 2344370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 18044118 - 18044178
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||| |||||||||||    
T  18044118 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcccaggttcgatt 18044178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 19421248 - 19421304
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttc 219  Q
    |||||||||| ||| |||||||||||||||||||| | |||||||||||||||||||    
T  19421248 tagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatttc 19421304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 22638303 - 22638363
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||||  |||||||||| |||||||||| | ||||||||||||||||||||    
T  22638303 ttggtctagtggttgacttgagatcttagagtttgctctttcaaaggtctcaggttcgatt 22638363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 17212050 - 17212120
Alignment:
Q  138 aaacccatttggggttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttc 213  Q
    |||||||||||||||||| ||     ||||||||| ||| |||||||||||||||||||||| |||||||||||||    
T  17212050 aaacccatttggggttggctt-----agtggttggcttgggatcttggagtttgctcctccagaggtctcaggttc 17212120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 25333415 - 25333489
Alignment:
Q  137 taaacccatttggggttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgat 216  Q
    ||||||||||||||||||| ||     ||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||    
T  25333415 taaacccatttggggttggctt-----agtggttggcttgggatcttggagtttgcttctccagaggtctcaggttcgat 25333489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 31713085 - 31713022
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||| ||||||||||||||| |||||||||||||||||||| | |||||||||| | |||||||    
T  31713085 ttggcctagtggttggtttgggatcttggagtttgctcctcgagaggtctcaggattgatttcc 31713022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 9718177 - 9718117
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| |||||||||||  |||||| |||||||||||||||||||| |||||| ||||||||    
T  9718177 ttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgatt 9718117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 13332613 - 13332553
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||  ||||||||||| |||||    
T  13332613 ttggcctagtggttggcttgggatcttggagtttgctcctcctgaggtctcaggtacgatt 13332553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 21370608 - 21370668
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||||||| ||||||||||||| ||||| || | |||||||||||||||    
T  21370608 ttggcctagtggttggtttgggatcttggagtttactccttcagatgtctcaggttcgatt 21370668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 27312163 - 27312223
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||| | |||| ||||||||||||    
T  27312163 ttggcctagtggttggcttgggatcttggagtttgctcctctagaggtttcaggttcgatt 27312223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 31197602 - 31197662
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||||| ||| ||||||||||||||||| |||| | |||||||||| ||||    
T  31197602 ttggtctagtggttggcttgggatcttggagtttgctcatccagatgtctcaggtttgatt 31197662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 27009370 - 27009429
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgat 216  Q
    |||| ||||||||||| ||  ||||||||||||||||| |||| ||||||||||||||||    
T  27009370 ttggcctagtggttggcttcggatcttggagtttgctcatccagaggtctcaggttcgat 27009429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 37693755 - 37693692
Alignment:
Q  154 ggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||| ||||||| ||||||||| ||||||||||| ||||||||  || |||||||||||||||    
T  37693755 ggtttagtctagttgttggtttgggatcttggagtgtgctcctcttaatgtctcaggttcgatt 37693692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 1469123 - 1469201
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||  |||| ||||||||||||| || ||  ||||||||||||||||||||| ||  ||||||||||    
T  1469123 ttggcctagtggttgacttgaaatcttggagtttgttcatctcaaggtctcaggttcgatttcctttaatgccaatttc 1469201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 8435885 - 8435807
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||||||||  ||| |||||||||||||||||||   ||| ||| |||||||||||||  || ||||||||||    
T  8435885 ttggtctagtggttgacttgggatcttggagtttgctcctttgaagatcttaggttcgatttcctctggtgccaatttc 8435807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 22696331 - 22696409
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| |||||||||| |||| ||||||||||| ||||||||  ||||||||||||| |||| ||  || ||||||||||    
T  22696331 ttggcctagtggttgatttgggatcttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttc 22696409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 14199848 - 14199796
Alignment:
Q  165 gtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||| ||||  |||||||||||| |||||||| |||||||||||||||||    
T  14199848 gtggttgatttggaatcttggagtttcctcctccagaggtctcaggttcgatt 14199796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 21574293 - 21574233
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||||||| ||| ||||||| ||||||||  |||||| |||||||||||    
T  21574293 ttggcctagtggttggtttgggattttggagtgtgctcctctcaaggtcacaggttcgatt 21574233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 37056231 - 37056303
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||||||| ||||||||||| ||||||||  ||||| | || ||||||||||  || ||||||||||    
T  37056231 tagtggttggtttgtgatcttggagtgtgctcctctcaaggtttgagattcgatttcctctggtgccaatttc 37056303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 654863 - 654816
Alignment:
Q  188 tttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||||||||||||||||||||||| ||  || ||||||||||    
T  654863 tttgctcctccaaaggtctcaggttcgattccctctggtgccaatttc 654816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 28003851 - 28003902
Alignment:
Q  161 tctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggtt 212  Q
    |||||||||||| ||| |||||||||||||||||||||| | |||| |||||    
T  28003851 tctagtggttggcttgggatcttggagtttgctcctccagaagtcttaggtt 28003902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 32849607 - 32849662
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||  ||| |||||||||||||||||||||| ||||||| |||| ||||    
T  32849607 ctagtggttgacttgggatcttggagtttgctcctccagaggtctcgggtttgatt 32849662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 43785480 - 43785429
Alignment:
Q  166 tggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||| ||| |||||| ||| |||||||||||||||||||| ||||||||    
T  43785480 tggttggcttgggatctttgagattgctcctccaaaggtctcaagttcgatt 43785429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 12211725 - 12211647
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||  ||||||||||| ||||||||  ||| ||||||||| |||||||  || ||||||||||    
T  12211725 ttggcctagtggttggcttaggatcttggagtgtgctcctctcaagatctcaggtttgatttcctctggtgccaatttc 12211647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 22264682 - 22264632
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||  |||||||||||||||||||  |||||||||| |||||||    
T  22264682 ggttggtttggaatcttggagtttgctcctctcaaggtctcagattcgatt 22264632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 36772471 - 36772429
Alignment:
Q  178 gatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||||||||||||||||||| | |||||||||||| |||||||    
T  36772471 gatcttggagtttgctcctctagaggtctcaggtttgatttcc 36772429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 42031930 - 42031988
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcga 215  Q
    |||||||||||||||||||| || ||| ||||||| |||||  ||||||||| ||||||    
T  42031930 ttggtctagtggttggtttgggaccttagagtttgttcctcttaaggtctcacgttcga 42031988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 9683837 - 9683890
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcagg 210  Q
    |||| ||||||||||  ||||||||| |||||||||||||| | ||||||||||    
T  9683837 ttggcctagtggttgacttgagatctgggagtttgctcctctagaggtctcagg 9683890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 23012691 - 23012638
Alignment:
Q  164 agtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||| ||| |||||||||||||||| ||||| |||||| ||||| ||||    
T  23012691 agtggttggcttgggatcttggagtttgcttctccagaggtcttaggtttgatt 23012638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 39145837 - 39145764
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||  ||| |||||||||||||||||||||| | ||||  ||||||||| ||  || ||||||||||    
T  39145837 ctagtggttgacttgggatcttggagtttgctcctccagatgtcttcggttcgattccctgtggtgccaatttc 39145764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 31288141 - 31288058
Alignment:
Q  152 ttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| |||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||    
T  31288141 ttgggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaatttc 31288058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 25586939 - 25587017
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||  || ||||||||||    
T  25586939 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttc 25587017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 13038644 - 13038567
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||  || |||||||||    
T  13038644 ttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 13038567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 32059630 - 32059570
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  32059630 ttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgatt 32059570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 37495059 - 37495131
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||  || |||||||||    
T  37495059 ctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 37495131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 1827715 - 1827660
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  1827715 ctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgatt 1827660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 11926692 - 11926614
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||| ||  || ||||||||||    
T  11926692 ttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccctctggtgccaatttc 11926614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 11465097 - 11465020
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| |||||| |||| |||| ||||||||||||||||||||||| ||||||||||||||||||  || |||||||||    
T  11465097 ttggcctagtgattggcttgaaatcttggagtttgctcctccaaatgtctcaggttcgatttcctctggtgccaattt 11465020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 15971306 - 15971249
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||    
T  15971306 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcc 15971249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 22392708 - 22392768
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  22392708 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 22392768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 37397720 - 37397780
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||||    
T  37397720 ttggtctagtggttggcttgtgatcttggagtttgctcctccaaaggtctaaggtttgatt 37397780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 15641290 - 15641235
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  15641290 ctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 15641235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 23270712 - 23270649
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||| ||||||||||| ||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  23270712 ttggcctagtggttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatttcc 23270649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 33709696 - 33709613
Alignment:
Q  152 ttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| |||| ||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||| ||  || ||||||||||    
T  33709696 ttgggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttc 33709613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 8484851 - 8484773
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||| |||| ||  || ||||||||||    
T  8484851 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaatttc 8484773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 12398628 - 12398578
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  12398628 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgatt 12398578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 38631151 - 38631073
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||| ||||||| ||  || ||||||||||    
T  38631151 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctggtgccaatttc 38631073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 13108639 - 13108562
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| || |||||||||||||| ||  || |||||||||    
T  13108639 ttggcctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaattt 13108562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 4603784 - 4603844
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||    
T  4603784 ttggcctagtggttggcttgggatcttggagtttgctcctccaaagatctcaagttcgatt 4603844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 10869747 - 10869695
Alignment:
Q  165 gtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  10869747 gtggttgacttgcgatcttggagtttgctcctccaaaggtctcaggttcgatt 10869695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 18207226 - 18207274
Alignment:
Q  169 ttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  18207226 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgatt 18207274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 34049829 - 34049889
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  34049829 ttgggctagtagttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 34049889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 38684222 - 38684293
Alignment:
Q  164 agtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||  ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  38684222 agtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 38684293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 34310133 - 34310226
Alignment:
Q  136 ttaaacccatttggggttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    ||||||||||||||||||||      |||||||| || |||  ||||||||||||||||||||| ||||||||||||||||| ||  || |||||||||    
T  34310133 ttaaacccatttggggttggc-----ctagtggtcggcttggaatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 34310226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 42193492 - 42193570
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||  ||| |||||||||||||||| | ||| ||||||||||||||||||||  || ||||||||||    
T  42193492 ttggcctagtggttgacttgggatcttggagtttgcttccccagaggtctcaggttcgatttcctctgatgccaatttc 42193570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 5067308 - 5067369
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgattt 218  Q
    |||||||||||||||  ||| |||||| ||||||||||||||| || |||||||||||||||    
T  5067308 ttggtctagtggttgacttgggatcttcgagtttgctcctccagagatctcaggttcgattt 5067369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 19456389 - 19456340
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgat 216  Q
    |||||| ||| |||||||||||||||||||||| ||||||||||||||||    
T  19456389 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat 19456340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 27498916 - 27498843
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||| |||  ||||||||||||||||||| | ||||||||||||||||| ||  || ||||||||||    
T  27498916 ctagtggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttc 27498843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 28614667 - 28614614
Alignment:
Q  164 agtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||| |||||||||| ||||||| |||||||||| ||||||||||||||    
T  28614667 agtggttggcttgagatcttagagtttgttcctccaaagatctcaggttcgatt 28614614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 36954825 - 36954885
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||  ||| |||||||||||||||||||| | |||||||||||||||||    
T  36954825 ttggcctagtggttgccttgggatcttggagtttgctcctctagaggtctcaggttcgatt 36954885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 3715099 - 3715057
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctcca 199  Q
    |||| ||||||||||||||| ||||||||||||||||||||||    
T  3715099 ttggcctagtggttggtttgggatcttggagtttgctcctcca 3715057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 7085810 - 7085756
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||| ||| ||||||||||||| |||||||| ||||||| |||||||||    
T  7085810 tagtggttggcttgggatcttggagttttctcctccagaggtctccggttcgatt 7085756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 30485845 - 30485895
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||| ||| ||||||||||||||||||| || |||||||||||||||||    
T  30485845 ggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgatt 30485895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 6014475 - 6014410
Alignment:
Q  152 ttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| |||| |||||| |||| ||| |||||||||||||||| ||||| || ||||||||||||||    
T  6014475 ttgggttggcctagtgattggcttgggatcttggagtttgcttctccagagatctcaggttcgatt 6014410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 14656694 - 14656645
Alignment:
Q  168 gttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||| |||||| |||||||||||||||||  ||||||||||||||||||    
T  14656694 gttggcttgagaccttggagtttgctcctctcaaggtctcaggttcgatt 14656645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 26009449 - 26009376
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||||||| |||||  |||||| |||||| |||||| || ||||||||| || ||| ||||||||||    
T  26009449 ctagtggttggtttgggatctcagagtttactcctcgaaaggtttccggttcgattccctttggtgccaatttc 26009376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 930668 - 930596
Alignment:
Q  164 agtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcca-ttgctgccaatttc 235  Q
    ||||||||| ||||||| || |||||||||||||  || ||||||||||||||| ||| ||| ||||||||||    
T  930668 agtggttggcttgagattttagagtttgctcctctcaaagtctcaggttcgattcccacttggtgccaatttc 930596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 16616132 - 16616187
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgattt 218  Q
    |||| ||||| ||| |||||||||||||||||||| |||| |||||| ||||||||    
T  16616132 tagtagttggcttgggatcttggagtttgctcctctaaagatctcagattcgattt 16616187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 25750801 - 25750750
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctca 208  Q
    |||| ||||||||||  ||| |||||||||||||||||||||| ||||||||    
T  25750801 ttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctca 25750750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 27487745 - 27487690
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggtt 212  Q
    |||| |||||||||| |||| ||| ||||||||||||| |||| ||||||||||||    
T  27487745 ttggcctagtggttgatttgggattttggagtttgctcttccagaggtctcaggtt 27487690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 15931066 - 15931144
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||| | ||| |||||||||||||||| || || | ||||||||||||||| ||  || ||||||||||    
T  15931066 ttggcctagtggttagcttgggatcttggagtttgcttcttcacaagtctcaggttcgattccctctggtgccaatttc 15931144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 19145601 - 19145523
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||  ||| ||||||||||| ||||||||  |||||||| ||||||||| ||  || ||||||||||    
T  19145601 ttggcctagtggttgacttgggatcttggagtatgctcctctcaaggtctccggttcgattccctctggtgccaatttc 19145523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 40330646 - 40330696
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttc 213  Q
    |||||||| | ||||||||||||||||||||||||  ||||||||| ||||    
T  40330646 tagtggttagcttgagatcttggagtttgctcctctcaaggtctcaagttc 40330696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 42006800 - 42006842
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctcca 199  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||    
T  42006800 ttgggctagtggttggcttgagatcttggagtttgctcatcca 42006842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 16173034 - 16172985
Alignment:
Q  168 gttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||| |||||| |||||||| ||||||||  ||||||||||||||||||    
T  16173034 gttggcttgagaccttggagtgtgctcctctcaaggtctcaggttcgatt 16172985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 43442222 - 43442271
Alignment:
Q  169 ttggtttgagatcttggagtttgctcctcc-aaaggtctcaggttcgatt 217  Q
    |||||||||||||| ||||| |||||||||  ||||||||||||||||||    
T  43442222 ttggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgatt 43442271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 7151346 - 7151394
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcga 215  Q
    |||||| ||| |||||||||||||||||||| | |||||| ||||||||    
T  7151346 ggttggcttgggatcttggagtttgctcctcaagaggtcttaggttcga 7151394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 21042715 - 21042663
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcag 209  Q
    ||||| ||||| |||||||| |||||||||||||||||||   ||||||||||    
T  21042715 ttggtttagtgattggtttgggatcttggagtttgctcctttcaaggtctcag 21042663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 196
Target Start/End: Complemental strand, 32007800 - 32007772
Alignment:
Q  168 gttggtttgagatcttggagtttgctcct 196  Q
    |||||||||||||||||||||||||||||    
T  32007800 gttggtttgagatcttggagtttgctcct 32007772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 5272 - 5194
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||    
T  5272 ttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttc 5194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 15360288 - 15360210
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||    
T  15360288 ttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttc 15360210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 11007176 - 11007232
Alignment:
Q  161 tctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  11007176 tctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgatt 11007232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 12591644 - 12591704
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  12591644 ttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgatt 12591704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 9238982 - 9239060
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  9238982 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 9239060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 11448878 - 11448938
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  11448878 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 11448938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 9843945 - 9844008
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||||||||||||||| ||| |||||||||||||||||||| | ||||||||||||||| ||||    
T  9843945 ttggtctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgacttcc 9844008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 9208263 - 9208337
Alignment:
Q  161 tctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||||| ||| ||||||||||||||||||||  |||||||||||||||||| ||  || ||||||||||    
T  9208263 tctagtggttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccccctggtgccaatttc 9208337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 654339 - 654258
Alignment:
Q  154 ggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||| ||||||| ||  ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  654339 ggtttggcctagtggctgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 654258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 9690823 - 9690766
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttc 219  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||||    
T  9690823 ctagtggttggtttgagattttggagtttgctcttccagaggtcttaggttcgatttc 9690766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 22576074 - 22576134
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||| |||||||    
T  22576074 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgatt 22576134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 33718648 - 33718588
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||||||||| ||||||||||||| || ||||| || ||||||||||||||    
T  33718648 ttggtctagtggttggtttgggatcttggagtttacttctccagagatctcaggttcgatt 33718588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 21982510 - 21982432
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| ||||||| |||||||||||||| |||||| |||||||||| ||  || ||||||||||    
T  21982510 ttggcctagtggttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattcccgatggtgccaatttc 21982432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 34147353 - 34147431
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| ||||||||||||||||| |||| | ||||||||||||||| ||  || ||||||||||    
T  34147353 ttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttc 34147431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 34159969 - 34160047
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| ||||||||||||||||| |||| | ||||||||||||||| ||  || ||||||||||    
T  34159969 ttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctggtgccaatttc 34160047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 13753247 - 13753303
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttc 213  Q
    |||| ||||||||||| ||  |||||||||||||||||||||| |||||||||||||    
T  13753247 ttggcctagtggttggctttggatcttggagtttgctcctccagaggtctcaggttc 13753303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 14212920 - 14212976
Alignment:
Q  178 gatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||||||||||||||||||||| ||||||||||||||||| ||  || |||||||||    
T  14212920 gatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaattt 14212976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 28672074 - 28672134
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||  |||||||||||||||||||||||| | |||||| ||||||||||    
T  28672074 ttggcctagtggttgacttgagatcttggagtttgctcctctagaggtcttaggttcgatt 28672134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 17149637 - 17149586
Alignment:
Q  166 tggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||| ||||||||||| ||||||||  ||||||||||||||||||    
T  17149637 tggttggtttgggatcttggagtgtgctcctctcaaggtctcaggttcgatt 17149586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 1344949 - 1345020
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||||  | |||||||||||||| ||||||| ||||||||||||||||| ||  || ||||||||||    
T  1344949 ctagtggttggt--gggatcttggagtttgttcctccagaggtctcaggttcgattccctctggtgccaatttc 1345020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 3222824 - 3222747
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| ||||||| ||||||||||| || ||||||||||||||||| ||  || ||||||||||    
T  3222824 ttggcctagtggttggcttgggatcttgcagtttgctcct-cagaggtctcaggttcgattccctctggtgccaatttc 3222747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 3433646 - 3433602
Alignment:
Q  174 ttgagatcttggagtttgctcctccaaaggtctcaggttcgattt 218  Q
    |||||| |||||||||||||||||  |||||||||||||||||||    
T  3433646 ttgagaccttggagtttgctcctctcaaggtctcaggttcgattt 3433602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 5360253 - 5360201
Alignment:
Q  165 gtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||| ||| |||||||||||||||| ||| | |||||||||||||||||    
T  5360253 gtggttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgatt 5360201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 33499489 - 33499537
Alignment:
Q  165 gtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttc 213  Q
    |||||||| ||| ||||||||||||||||||||  ||||||||||||||    
T  33499489 gtggttggcttgggatcttggagtttgctcctctcaaggtctcaggttc 33499537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 28968222 - 28968172
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||| ||| |||||||||||||||||||| | ||||||||| |||||||    
T  28968222 ggttggcttgggatcttggagtttgctcctctagaggtctcagattcgatt 28968172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 17081241 - 17081184
Alignment:
Q  160 gtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||| ||  |||||||||||||||||||||| | |||||| ||| ||||    
T  17081241 gtctagtggttggcttaggatcttggagtttgctcctccagatgtctcaagtttgatt 17081184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 17706489 - 17706437
Alignment:
Q  165 gtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||  ||| |||||||||||||||||||||| | |||||| ||||||||    
T  17706489 gtggttgacttgggatcttggagtttgctcctccagaagtctcaagttcgatt 17706437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 21148700 - 21148640
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| ||||||||||||||||  | || |||||||| ||||||||    
T  21148700 ttggcctagtggttggcttgggatcttggagtttgctttttcagaggtctcaagttcgatt 21148640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 66769 - 66829
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||    
T  66769 ttggtctagtggttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgatt 66829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 27455056 - 27454996
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  27455056 ttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 27454996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 29057527 - 29057467
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  29057527 ttggcctagtggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgatt 29057467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 46113592 - 46113532
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  46113592 ttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgatt 46113532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 4621427 - 4621349
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  4621427 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 4621349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 7197436 - 7197358
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  7197436 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttc 7197358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 24674400 - 24674478
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  24674400 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 24674478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 46607817 - 46607895
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||  ||| |||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||    
T  46607817 ttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttc 46607895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 30677188 - 30677261
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||  || ||||||||||    
T  30677188 ctagtggttggtttgggatctaggagtttgctcctccaaaggtctcaggtttgattccctctggtgccaatttc 30677261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 8077654 - 8077714
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  8077654 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 8077714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 7578421 - 7578494
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||| ||| |||||||||||||| ||||||| ||||||||||||||||| ||  || ||||||||||    
T  7578421 ctagtggttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattccctatggtgccaatttc 7578494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 7946856 - 7946929
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||| ||||||||||| |||||||||||||| |||||||| |||||||| ||  || ||||||||||    
T  7946856 ctagtggttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttc 7946929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 21726741 - 21726814
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||| |||| | ||||| |||||||||||||| ||||||||||||||||| || ||| ||||||||||    
T  21726741 ctagtggttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttc 21726814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 7766917 - 7766857
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||    
T  7766917 ttggcctagtggttagcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 7766857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 15059592 - 15059532
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| |||  ||||||||||||||||||||| |||||||||||||||||    
T  15059592 ttggcctagtggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgatt 15059532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 20487393 - 20487302
Alignment:
Q  139 aacccatttggggttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||||||||||||     ||||||||| | | |||||||||||||||||||||| |||||||| |||||||| ||  || ||||||||||    
T  20487393 aacccatttggggttggttt-----agtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttc 20487302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 24122036 - 24122108
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||||||||| ||| |||||||| ||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  24122036 tagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 24122108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 34778349 - 34778409
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||| ||||    
T  34778349 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgatt 34778409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 37351643 - 37351591
Alignment:
Q  165 gtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  37351643 gtggttggcttgggatcttggagtttgctcctccaaatgtctcaggttcgatt 37351591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 168208 - 168286
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||| |||||||||| | |||||||||||||||||||| ||  || ||||||||||    
T  168208 ttggcctagtggttggcttgggatcttagagtttgctctttcaaaggtctcaggttcgattccctctggtgccaatttc 168286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 17935782 - 17935836
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||  ||| |||||||||||||||||||||| |||||||||||||||||    
T  17935782 tagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 17935836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 33905690 - 33905640
Alignment:
Q  167 ggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  33905690 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 33905640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 1378752 - 1378813
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgattt 218  Q
    |||||||||||||||  |||  |||||||||||| ||||||||||||||||| |||||||||    
T  1378752 ttggtctagtggttgacttggaatcttggagtttactcctccaaaggtctcatgttcgattt 1378813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 1378911 - 1378968
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||||||||  ||| |||||||||||||||||||||||| |||||| |||||||||||    
T  1378911 tagtggttgacttgggatcttggagtttgctcctccaaaagtctcatgttcgatttcc 1378968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 19034569 - 19034516
Alignment:
Q  164 agtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||||| |||||||||||||| ||||| |||||| ||||||||||||    
T  19034569 agtggttggtttgggatcttggagtttgttcctcaaaaggtttcaggttcgatt 19034516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 23734105 - 23734201
Alignment:
Q  134 gtttaaacccatttggggttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatt 233  Q
    |||| ||||||||||||||||||||     ||| ||||| ||| |||||| || |||||||||||| ||||||||||||||||| ||  || ||||||||    
T  23734105 gttttaacccatttggggttggttt-----agtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatt 23734199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 23741297 - 23741393
Alignment:
Q  134 gtttaaacccatttggggttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatt 233  Q
    |||| ||||||||||||||||||||     ||| ||||| ||| |||||| || |||||||||||| ||||||||||||||||| ||  || ||||||||    
T  23741297 gttttaacccatttggggttggttt-----agtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatgccaatt 23741391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 24216990 - 24217063
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||  ||| ||||||||||| ||||||||  |||||||||||||||||| || ||| ||||||||||    
T  24216990 ctagtggttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgattacctttggtgccaatttc 24217063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 8779920 - 8779864
Alignment:
Q  163 tagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttc 219  Q
    ||||||||| |||| |||||||||||||||| ||||| ||||||||| |||||||||    
T  8779920 tagtggttgatttgggatcttggagtttgcttctccagaggtctcagcttcgatttc 8779864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 18646865 - 18646920
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    ||||||||||| ||| |||||| ||||||||| ||||| |||||||||||||||||    
T  18646865 ctagtggttggcttgtgatctttgagtttgcttctccagaggtctcaggttcgatt 18646920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 36156063 - 36156000
Alignment:
Q  172 gtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||| ||  || ||||||||||    
T  36156063 gtttgggatcttggagtttgctcctccagaggtgtcaggttcgattccctctggtgccaatttc 36156000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 45859222 - 45859155
Alignment:
Q  168 gttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||| ||| |||||||||||||||||||| | ||||||||||||||||| ||  || ||||||||||    
T  45859222 gttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttc 45859155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 6776146 - 6776196
Alignment:
Q  152 ttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaag 202  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||| |||||    
T  6776146 ttgggttggcctagtggttggtttgggatcttggagtttgctccttcaaag 6776196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 32729552 - 32729630
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||| |||||||||||||  || ||||||||||||||| ||  || ||||||||||    
T  32729552 ttggcctagtggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccctatggtgccaatttc 32729630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 32930761 - 32930819
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||||||||||||||  |||||||||||| ||||| || |||||||| |||||||||||    
T  32930761 ctagtggttggtttggaatcttggagtttactccttcagaggtctcaagttcgatttcc 32930819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 1138591 - 1138644
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcga 215  Q
    ||||||||||| ||||||||||||||| ||||||||  ||||||| ||||||||    
T  1138591 ctagtggttggcttgagatcttggagtgtgctcctctcaaggtcttaggttcga 1138644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 809237 - 809289
Alignment:
Q  165 gtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||||| ||||    
T  809237 gtggttggtttgggatcttggagtttactcctcttaaggtctcaggtttgatt 809289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 9500533 - 9500485
Alignment:
Q  169 ttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||| ||||||||||||||||||| || |||||||||||||||||    
T  9500533 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgatt 9500485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 14258617 - 14258557
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||| ||||||| | ||||| |||||||||    
T  14258617 ttggcctagtggttggcttgggatcttggagtttgttcctccagatgtctctggttcgatt 14258557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 25237179 - 25237119
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||| ||||| ||||| |||||||||||||||| |||  ||||||||||||||||||    
T  25237179 ttggcctaatggttagtttgggatcttggagtttgcttctctcaaggtctcaggttcgatt 25237119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 52135137 - 52135197
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||||||||||||||  ||| ||||||||||||||||| ||  || |||||||||||||||    
T  52135137 ttggtctagtggttgacttgggatcttggagtttgctcatctcaatgtctcaggttcgatt 52135197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 37349530 - 37349593
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    ||||| |||||||||  |||||||||| |||||||||||||  | | |||||||||||||||||    
T  37349530 ttggtttagtggttgacttgagatcttagagtttgctcctctcatgatctcaggttcgatttcc 37349593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 1486432 - 1486503
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||| ||| |||||||||||  ||| |||  |||||||||||||||||| || ||| ||||||||||    
T  1486432 ctagtggttggcttgggatcttggagt--gctactctcaaggtctcaggttcgattccctttggtgccaatttc 1486503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 2272351 - 2272429
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||  ||| |||||| |||||||||||| || |||||||||||| |||| ||  || ||||||||||    
T  2272351 ttggcctagtggttgacttgggatcttagagtttgctcctacagaggtctcaggtttgattccctctgatgccaatttc 2272429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 10059067 - 10059117
Alignment:
Q  162 ctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggtt 212  Q
    ||||||||||  ||||||||||||||||||||||||  || ||||||||||    
T  10059067 ctagtggttgacttgagatcttggagtttgctcctctcaaagtctcaggtt 10059117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 47091697 - 47091735
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcc 195  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  47091697 ttggcctagtggttggcttgagatcttggagtttgctcc 47091735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 52592567 - 52592605
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcc 195  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  52592567 ttggtctagtggttggcttgagatcttagagtttgctcc 52592605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 23232455 - 23232395
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||  ||| ||||||| ||||||||| |||| |||| ||||||||||||    
T  23232455 ttggcctagtggttgacttgggatcttgaagtttgctcttccagaggtttcaggttcgatt 23232395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 10883 - 10820
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||    
T  10883 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcc 10820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 12190 - 12127
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttcc 220  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||    
T  12190 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcc 12127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 9489 - 9429
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  9489 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 9429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 97556 - 97478
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| ||  || ||||||||||    
T  97556 ttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttc 97478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 1246 - 1186
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  1246 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 1186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 8597 - 8537
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  8597 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 8537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 27783 - 27860
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaattt 234  Q
    |||||||||||||||||||| ||| ||||||||||||||||  |||||||| ||||||||| ||  || |||||||||    
T  27783 ttggtctagtggttggtttgggattttggagtttgctcctctcaaggtctcgggttcgattccctgtggtgccaattt 27860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 148 - 88
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||| ||| ||||||||||||||||| |||| |||||||||||||||||    
T  148 ttggcctagtggttggcttgtgatcttggagtttgctcgtccagaggtctcaggttcgatt 88  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 8382 - 8291
Alignment:
Q  139 aacccatttggggttggtttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||||||||||||     ||||||||| | | |||||||||||||||||||||| |||||||| |||||||| ||  || ||||||||||    
T  8382 aacccatttggggttggttt-----agtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttc 8291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 41834 - 41774
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||  ||| |||||||||||||||||||||| |||||||||||||||||    
T  41834 ttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 41774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 40332 - 40410
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||  ||||||||||||||||||| || ||||||||||||||||| ||  || ||||||||||    
T  40332 ttggcctagtggttggcttaggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgccaatttc 40410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 53061 - 52983
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||||||||||| ||| |||||||||||||||||||||| |||  |||||||||||| ||  || ||||||||||    
T  53061 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggcttcaggttcgattccctctggtgccaatttc 52983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 161828 - 161894
Alignment:
Q  169 ttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||| ||  || ||||||||||    
T  161828 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 161894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 14998 - 15054
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttc 213  Q
    |||| |||||||||||  || |||||||||||||||||||||| |||||||||||||    
T  14998 ttggcctagtggttggcctgggatcttggagtttgctcctccagaggtctcaggttc 15054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 7499 - 7439
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||| ||||| ||| |||||||||||||||||||||| || ||||||||||||||    
T  7499 ttggcctagtagttggcttgggatcttggagtttgctcctccagagatctcaggttcgatt 7439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 20250 - 20307
Alignment:
Q  178 gatcttggagtttgctcctccaaaggtctcaggttcgatttccattgctgccaatttc 235  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||  || ||||||||||    
T  20250 gatcttggagtttgctccttcaaaggtctcaggtttgattccctctggtgccaatttc 20307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 12944 - 12884
Alignment:
Q  157 ttggtctagtggttggtttgagatcttggagtttgctcctccaaaggtctcaggttcgatt 217  Q
    |||| ||||||||||  ||| |||||||||||| ||||||||| || ||||||||||||||    
T  12944 ttggcctagtggttgacttgggatcttggagttcgctcctccagagatctcaggttcgatt 12884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University